RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF780A (Homo sapiens)

Ensembl gene IDs: ENSG00000197782

Ensembl transcript IDs: ENST00000340963.9, ENST00000414720.6, ENST00000450241.6, ENST00000455521.5, ENST00000595687.6, ENST00000626829.2, ENST00000628273.2, ENST00000629480.2, ENST00000630440.2, ENST00000630528.2

Found 310 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCAGCATCTGCTTCTGCTAAGGGTCTCAGGCTGCTTCCACTCATaGCAGATGATGAAGGGAGAGCCAGTGTATGCAGACATCACATGG +
Preference number: 1 (lower is better)
Translates to: VQHLLLLRVSGCFHS*QMMKGEPVYADITW
Trigger: CCATGTGATGTCTGCATACACTGGCTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCCTGAGACCCTTAGCAGAAGCAGATGCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR GCA 90 bp CCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATAACTaGAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTAT +
Preference number: 1 (lower is better)
Translates to: PQGCHKPSVCIKHNN*NAQFSEVCLYLVNY
Trigger: ATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR TCA 90 bp ACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTCCAGCAGCGGGAGGGACAATaGTCAGGATATAAACCCAGG +
Preference number: 2 (lower is better)
Translates to: TGLLAHAPMLMTSKAPLQQREGQ*SGYKPR
Trigger: CCTGGGTTTATATCCTGATCATTGTCCCTCCCGCTG...CTGGAGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR TCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGCAGCGGGAGGGACAATaGTCAGGATATAAACCCAGG +
Preference number: 2 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKQREGQ*SGYKPR
Trigger: CCTGGGTTTATATCCTGATCATTGTCCCTCCCGCTG...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR TCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGGTTGAGAGGGGGTACTaGGAAACAGGACTAGCAGGA +
Preference number: 2 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKVERGY*ETGLAG
Trigger: TCCTGCTAGTCCTGTTTCTCAGTACCCCCTCTCAAC...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGCTCCCCAACAGCACTTaGGTTTTCCTGTTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKLPNST*VFLLRG
Trigger: CCCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAG...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR GCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGAGGGCCTGTGAAGTGTaGCAAAGAAATAATCCCCTG +
Preference number: 2 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKRACEV*QRNNPL
Trigger: CAGGGGATTATTTCTTTGGCACACTTCACAGGCCCT...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CCA 90 bp CATCTGCTTCTGCTAAGGGTCTCAGGCTGCTTCCACTCATGGCAGATGATGAAGCTCCCCAACAGCACTTaGGTTTTCCTGTTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: HLLLLRVSGCFHSWQMMKLPNST*VFLLRG
Trigger: CCCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAG...CTTCATCATCTGCCATGAGTGGAAGCAGCCTGAGACCCTTAGCAGAAGCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR CAA 90 bp TCAGGATATAAACCCAGGCATTCGAGCCGGCAACGACTACCCTCTTaGGGTCCCCTCCCTTTGTATGGGAGCTCTGTTTTCACTCTATTA +
Preference number: 2 (lower is better)
Translates to: SGYKPRHSSRQRLPS*GPLPLYGSSVFTLL
Trigger: TAATAGAGTGAAAACAGAGCTCCCATACAAAGGGAGGGGACCCAAAGAGGGTAGTCGTTGCCGGCTCGAATGCCTGGGTTTATATCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR GCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGAATAATCCCCTGCACTaGAGGCCATACATTTCAATC +
Preference number: 2 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKNNPLH*RPYISI
Trigger: GATTGAAATGTATGGCCTGCAGTGCAGGGGATTATT...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGTTTACAATGGACTTATaGCGGTTACCAGCTTACCCA +
Preference number: 2 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKFTMDL*RLPAYP
Trigger: TGGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAA...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGTTAAGAATGAGGAGATaGACCAGGCCTTTTCAAAAC +
Preference number: 2 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKLRMRR*TRPFQN
Trigger: GTTTTGAAAAGGCCTGGTCCATCTCCTCATTCTTAA...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR GCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGCAATTCAGCGAGGTATaGCTGTATCTGGTAAATTAT +
Preference number: 2 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKQFSEV*LYLVNY
Trigger: ATAATTTACCAGATACAGGCATACCTCGCTGAATTG...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR GCA 90 bp AGGCTGCTTCCACTCATGGCAGATGATGAAGGGAGAGCCAGTGTATGCAGACATAATAATCCCCTGCACTaGAGGCCATACATTTCAATC +
Preference number: 2 (lower is better)
Translates to: RLLPLMADDEGRASVCRHNNPLH*RPYISI
Trigger: GATTGAAATGTATGGCCTGCAGTGCAGGGGATTATT...ATGTCTGCATACACTGGCTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR CCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGATTAGATCTTTACAATaGACTTATGGCGGTTACCAG +
Preference number: 2 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKIRSLQ*TYGGYQ
Trigger: CTGGTAACCGCCATAAGTCCATTGTAAAGATCTAAT...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR GCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGTCTGACAGTGAAATATaGCATACAAATAGCCTACAA +
Preference number: 2 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKSDSEI*HTNSLQ
Trigger: TTGTAGGCTATTTGTATGGCATATTTCACTGTCAGA...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR TCA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTCAGCGGGAGGGACAATaGTCAGGATATAAACCCAGG +
Preference number: 2 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCQREGQ*SGYKPR
Trigger: CCTGGGTTTATATCCTGATCATTGTCCCTCCCGCTG...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR TCA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCCAGCGGGAGGGACAATaGTCAGGATATAAACCCAGG +
Preference number: 2 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPQREGQ*SGYKPR
Trigger: CCTGGGTTTATATCCTGATCATTGTCCCTCCCGCTG...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR TCA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCCCCAGATGCAGTCCATaGCTAAAATCTACCGCGGAC +
Preference number: 2 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPPRCSP*LKSTAD
Trigger: GTCCGCGGTAGATTTTAGTCATGGACTGCATCTGGG...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR TCA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTCCCAGATGCAGTCCATaGCTAAAATCTACCGCGGAC +
Preference number: 2 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCPRCSP*LKSTAD
Trigger: GTCCGCGGTAGATTTTAGTCATGGACTGCATCTGGG...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR GCA 90 bp AGGCTGCTTCCACTCATGGCAGATGATGAAGGGAGAGCCAGTGTATGCAGACATATCATCCACAGCAAATaGTTTCCCATATTCCTTACA +
Preference number: 2 (lower is better)
Translates to: RLLPLMADDEGRASVCRHIIHSK*FPIFLT
Trigger: TGTAAGGAATATGGGAAAGCATTTGCTGTGGATGAT...ATGTCTGCATACACTGGCTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR CCA 90 bp CATCTGCTTCTGCTAAGGGTCTCAGGCTGCTTCCACTCATGGCAGATGATGAAGTATGGGCAGAATTTGTaGTATCCCAAAGCAATTACA +
Preference number: 2 (lower is better)
Translates to: HLLLLRVSGCFHSWQMMKYGQNL*YPKAIT
Trigger: TGTAATTGCTTTGGGATACCACAAATTCTGCCCATA...CTTCATCATCTGCCATGAGTGGAAGCAGCCTGAGACCCTTAGCAGAAGCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR CCA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCCTCCCCAACAGCACTTaGGTTTTCCTGTTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPLPNST*VFLLRG
Trigger: CCCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAG...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CCA 90 bp AGGCTGCTTCCACTCATGGCAGATGATGAAGGGAGAGCCAGTGTATGCAGACATCAAGGAAATAGTCTATaGATGCCTTCTCTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: RLLPLMADDEGRASVCRHQGNSL*MPSLLL
Trigger: TAAAAGCAGAGAAGGCATCCATAGACTATTTCCTTG...ATGTCTGCATACACTGGCTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR CCA 90 bp CATCTGCTTCTGCTAAGGGTCTCAGGCTGCTTCCACTCATGGCAGATGATGAAGTCTGATATCATAATGTaGTTCAAGGTCCACCAATCT +
Preference number: 2 (lower is better)
Translates to: HLLLLRVSGCFHSWQMMKSDIIM*FKVHQS
Trigger: AGATTGGTGGACCTTGAACCACATTATGATATCAGA...CTTCATCATCTGCCATGAGTGGAAGCAGCCTGAGACCCTTAGCAGAAGCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR TCA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATATTTTTCGTACACAGTaGAGGCTTGTCCACACTCCT +
Preference number: 2 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNIFRTQ*RLVHTP
Trigger: AGGAGTGTGGACAAGCCTTCACTGTGTACGAAAAAT...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR TCA 90 bp AATACACTAAAGAGAGATAACCAAATGCAATGCAGATTCTGCAATGGATTCTCCGTTGAGAGGGGGTACTaGGAAACAGGACTAGCAGGA +
Preference number: 2 (lower is better)
Translates to: NTLKRDNQMQCRFCNGFSVERGY*ETGLAG
Trigger: TCCTGCTAGTCCTGTTTCTCAGTACCCCCTCTCAAC...GGAGAATCCATTGCAGAATCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR TCA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCCCAGATGCAGTCCATaGCTAAAATCTACCGCGGAC +
Preference number: 2 (lower is better)
Translates to: MFSDSEICHTNSLQSILPPRCSP*LKSTAD
Trigger: GTCCGCGGTAGATTTTAGTCATGGACTGCATCTGGG...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CCA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCTCCCCAACAGCACTTaGGTTTTCCTGTTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: MFSDSEICHTNSLQSILPLPNST*VFLLRG
Trigger: CCCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAG...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR GCA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAAAGGGCCTGTGAAGTGTaGCAAAGAAATAATCCCCTG +
Preference number: 2 (lower is better)
Translates to: LWTQIPLYRICNKENNTKRACEV*QRNNPL
Trigger: CAGGGGATTATTTCTTTGGCACACTTCACAGGCCCT...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR TCA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATATGCTGAATAACGTTTaGACCACAAATGAAGCCTTT +
Preference number: 2 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNMLNNV*TTNEAF
Trigger: AAAGGCTTCATTTGTGGTTCAAACGTTATTCAGCAT...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR TCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCATTTTTCGTACACAGTaGAGGCTTGTCCACACTCCT +
Preference number: 2 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSIFRTQ*RLVHTP
Trigger: AGGAGTGTGGACAAGCCTTCACTGTGTACGAAAAAT...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR TCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCATGTGACATAAAGACATaGAATGCACACCTGACGTTG +
Preference number: 2 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKACDIKT*NAHLTL
Trigger: CAACGTCAGGTGTGCATTTCATGTCTTTATGTCACA...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR TCA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCCTCACATACCAGCCATaGTGTATAGGTGCTGATGAT +
Preference number: 2 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGLTYQP*CIGADD
Trigger: ATCATCAGCACCTATACATCATGGCTGGTATGTGAG...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR TCA 90 bp AATACACTAAAGAGAGATAACCAAATGCAATGCAGATTCTGCAATGGATTCTCCCTCACATACCAGCCATaGTGTATAGGTGCTGATGAT +
Preference number: 2 (lower is better)
Translates to: NTLKRDNQMQCRFCNGFSLTYQP*CIGADD
Trigger: ATCATCAGCACCTATACATCATGGCTGGTATGTGAG...GGAGAATCCATTGCAGAATCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR GCA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATATCATCCACAGCAAATaGTTTCCCATATTCCTTACA +
Preference number: 2 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNIIHSK*FPIFLT
Trigger: TGTAAGGAATATGGGAAAGCATTTGCTGTGGATGAT...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR GCA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATCAATTCAGCGAGGTATaGCTGTATCTGGTAAATTAT +
Preference number: 2 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNQFSEV*LYLVNY
Trigger: ATAATTTACCAGATACAGGCATACCTCGCTGAATTG...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR GCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCAAATAATCCCCTGCACTaGAGGCCATACATTTCAATC +
Preference number: 2 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKANNPLH*RPYISI
Trigger: GATTGAAATGTATGGCCTGCAGTGCAGGGGATTATT...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR GCA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTAGGGCCTGTGAAGTGTaGCAAAGAAATAATCCCCTG +
Preference number: 2 (lower is better)
Translates to: DSEICHTNSLQSILPQNVRACEV*QRNNPL
Trigger: CAGGGGATTATTTCTTTGGCACACTTCACAGGCCCT...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR GCA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCAGGGCCTGTGAAGTGTaGCAAAGAAATAATCCCCTG +
Preference number: 2 (lower is better)
Translates to: MFSDSEICHTNSLQSILPRACEV*QRNNPL
Trigger: CAGGGGATTATTTCTTTGGCACACTTCACAGGCCCT...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCAACTCATTCTTCAAATaGAGCCCCAGATGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSNSFFK*SPRCSP
Trigger: TGGACTGCATCTGGGGCTCCATTTGAAGAATGAGTT...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR CCA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAAAACTCATTCTTCAAATaGAGCCCCAGATGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: LWTQIPLYRICNKENNTKNSFFK*SPRCSP
Trigger: TGGACTGCATCTGGGGCTCCATTTGAAGAATGAGTT...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CCA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCTTAAGAATGAGGAGATaGACCAGGCCTTTTCAAAAC +
Preference number: 2 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPLRMRR*TRPFQN
Trigger: GTTTTGAAAAGGCCTGGTCCATCTCCTCATTCTTAA...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR TCA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCATGCTGAATAACGTTTaGACCACAAATGAAGCCTTT +
Preference number: 2 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPMLNNV*TTNEAF
Trigger: AAAGGCTTCATTTGTGGTTCAAACGTTATTCAGCAT...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR TCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTATTTTTCGTACACAGTaGAGGCTTGTCCACACTCCT +
Preference number: 2 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIIFRTQ*RLVHTP
Trigger: AGGAGTGTGGACAAGCCTTCACTGTGTACGAAAAAT...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR GCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCACATAAAGACATGAAATaGACACCTGACGTTGGGAAA +
Preference number: 2 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKAHKDMK*TPDVGK
Trigger: TTTCCCAACGTCAGGTGTGCATTTCATGTCTTTATG...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR CCA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTAATGTTCTAGGTCAGTaGCTCTCTAACTCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: DSEICHTNSLQSILPQNVNVLGQ*LSNSGW
Trigger: CCAACCAGAGTTAGAGAGCCACTGACCTAGAACATT...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR CAA 90 bp GTAGCTTTACTAAGTGCCACTGTTGATTCTAATACCTACCAAAATTaGAGCGCCTACATTCATAGGATTTCCAGGCTACAATACACTAAA +
Preference number: 2 (lower is better)
Translates to: VALLSATVDSNTYQN*SAYIHRISRLQYTK
Trigger: TTTAGTGTATTGTAGCCTGGAAATCCTATGAATGTAGGCGCTCAAATTTTGGTAGGTATTAGAATCAACAGTGGCACTTAGTAAAGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR TCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCAATGCTGAATAACGTTTaGACCACAAATGAAGCCTTT +
Preference number: 2 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKAMLNNV*TTNEAF
Trigger: AAAGGCTTCATTTGTGGTTCAAACGTTATTCAGCAT...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR TCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCAACCAGCTTACCCAAATaGTCAAACTTAGTTTCACTA +
Preference number: 2 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKATSLPK*SNLVSL
Trigger: TAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGT...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR GCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCAATCATCCACAGCAAATaGTTTCCCATATTCCTTACA +
Preference number: 2 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKAIIHSK*FPIFLT
Trigger: TGTAAGGAATATGGGAAAGCATTTGCTGTGGATGAT...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR GCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCACAATTCAGCGAGGTATaGCTGTATCTGGTAAATTAT +
Preference number: 2 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKAQFSEV*LYLVNY
Trigger: ATAATTTACCAGATACAGGCATACCTCGCTGAATTG...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR CCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCAATTAGATCTTTACAATaGACTTATGGCGGTTACCAG +
Preference number: 2 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKAIRSLQ*TYGGYQ
Trigger: CTGGTAACCGCCATAAGTCCATTGTAAAGATCTAAT...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR TCA 90 bp AATACACTAAAGAGAGATAACCAAATGCAATGCAGATTCTGCAATGGATTCTCCATGCTGAATAACGTTTaGACCACAAATGAAGCCTTT +
Preference number: 2 (lower is better)
Translates to: NTLKRDNQMQCRFCNGFSMLNNV*TTNEAF
Trigger: AAAGGCTTCATTTGTGGTTCAAACGTTATTCAGCAT...GGAGAATCCATTGCAGAATCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR TCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCATGCTGAATAACGTTTaGACCACAAATGAAGCCTTT +
Preference number: 2 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSMLNNV*TTNEAF
Trigger: AAAGGCTTCATTTGTGGTTCAAACGTTATTCAGCAT...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR TCA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCACCAGCTTACCCAAATaGTCAAACTTAGTTTCACTA +
Preference number: 2 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGTSLPK*SNLVSL
Trigger: TAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGT...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR GCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCATCATCCACAGCAAATaGTTTCCCATATTCCTTACA +
Preference number: 2 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSIIHSK*FPIFLT
Trigger: TGTAAGGAATATGGGAAAGCATTTGCTGTGGATGAT...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR GCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTATCATCCACAGCAAATaGTTTCCCATATTCCTTACA +
Preference number: 2 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIIIHSK*FPIFLT
Trigger: TGTAAGGAATATGGGAAAGCATTTGCTGTGGATGAT...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR GCA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTCAATTCAGCGAGGTATaGCTGTATCTGGTAAATTAT +
Preference number: 2 (lower is better)
Translates to: DSEICHTNSLQSILPQNVQFSEV*LYLVNY
Trigger: ATAATTTACCAGATACAGGCATACCTCGCTGAATTG...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR GCA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTAGAGAGATAACCAAATaGAATGCAGATTCTGCAATG +
Preference number: 2 (lower is better)
Translates to: DSEICHTNSLQSILPQNVREITK*NADSAM
Trigger: CATTGCAGAATCTGCATTGCATTTGGTTATCTCTCT...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR GCA 72 bp ATCTACCGCGGACCCCTGGACCGGCCTGCTAGCCCATaGTCCAATGTTAATGACATCGAAGGCACCCCTCCA +
Preference number: 3 (lower is better)
Translates to: IYRGPLDRPASP*SNVNDIEGTPP
Trigger: TGGAGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAGGGGTCCGCGGTAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR CCA 72 bp AACCCAGGCATTCGAGCCGGCAACGACTACCCTCTTTaGGTCCCCTCCCTTTGTATGGGAGCTCTGTTTTCA +
Preference number: 3 (lower is better)
Translates to: NPGIRAGNDYPL*VPSLCMGALFS
Trigger: TGAAAACAGAGCTCCCATACAAAGGGAGGGGACCCAAAGAGGGTAGTCGTTGCCGGCTCGAATGCCTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CAA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGTTGGGTCCCCTCCCTTaGTATGGGAGCTCTGTTTTC +
Preference number: 3 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKLGPLP*YGSSVF
Trigger: GAAAACAGAGCTCCCATACAAAGGGAGGGGACCCAA...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR GCA 72 bp ATGGTGCAGCATCTGCTTCTGCTAAGGGTCTCAGGCTaGTTCCACTCATGGCAGATGATGAAGGGAGAGCCA +
Preference number: 3 (lower is better)
Translates to: MVQHLLLLRVSG*FHSWQMMKGEP
Trigger: TGGCTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCCTGAGACCCTTAGCAGAAGCAGATGCTGCACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR CCA 72 bp CTGCTTCTGCTAAGGGTCTCAGGCTGCTTCCACTCATaGCAGATGATGAAGGGAGAGCCAGTGTATGCAGAC +
Preference number: 3 (lower is better)
Translates to: LLLLRVSGCFHS*QMMKGEPVYAD
Trigger: GTCTGCATACACTGGCTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCCTGAGACCCTTAGCAGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR TCA 72 bp ATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATaGTCAGGATATAAACCCAGGCATTCGAGCCGGCAA +
Preference number: 3 (lower is better)
Translates to: IIYCLRAQREGQ*SGYKPRHSSRQ
Trigger: TTGCCGGCTCGAATGCCTGGGTTTATATCCTGATCATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CAA 90 bp CATCTGCTTCTGCTAAGGGTCTCAGGCTGCTTCCACTCATGGCAGATGATGAAGGTCGTCCTCCACTCCTaGCATACAAAGAGTTTCTCA +
Preference number: 3 (lower is better)
Translates to: HLLLLRVSGCFHSWQMMKVVLHS*HTKSFS
Trigger: TGAGAAACTCTTTGTATGCAAGGAGTGGAGGACGAC...CTTCATCATCTGCCATGAGTGGAAGCAGCCTGAGACCCTTAGCAGAAGCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR TCA 72 bp CAACAGCACTTGGGTTTTCCTGTTGAGAGGGGGTACTaGGAAACAGGACTAGCAGGATTTCCTAGGCCGATT +
Preference number: 3 (lower is better)
Translates to: QQHLGFPVERGY*ETGLAGFPRPI
Trigger: AATCGGCCTAGGAAATCCTGCTAGTCCTGTTTCTCAGTACCCCCTCTCAACAGGAAAACCCAAGTGCTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR TCA 72 bp GAGGGCATTAATTTATTCATGAGGGATCTTCCACCATaGCCCAAACACCTTCCATTAGGCCCCACCTCCAAC +
Preference number: 3 (lower is better)
Translates to: EGINLFMRDLPP*PKHLPLGPTSN
Trigger: GTTGGAGGTGGGGCCTAATGGAAGGTGTTTGGGTCATGGTGGAAGATCCCTCATGAATAAATTAATGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR CAA 90 bp CATCTGCTTCTGCTAAGGGTCTCAGGCTGCTTCCACTCATGGCAGATGATGAAGACCTCCTTGTTAAGTTaGTCTTTTCCAGAATCGAAG +
Preference number: 3 (lower is better)
Translates to: HLLLLRVSGCFHSWQMMKTSLLS*SFPESK
Trigger: CTTCGATTCTGGAAAAGACAAACTTAACAAGGAGGT...CTTCATCATCTGCCATGAGTGGAAGCAGCCTGAGACCCTTAGCAGAAGCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR CCA 72 bp GCAACGACTACCCTCTTTGGGTCCCCTCCCTTTGTATaGGAGCTCTGTTTTCACTCTATTAAATCTTGCAAC +
Preference number: 3 (lower is better)
Translates to: ATTTLFGSPPFV*ELCFHSIKSCN
Trigger: GTTGCAAGATTTAATAGAGTGAAAACAGAGCTCCCATACAAAGGGAGGGGACCCAAAGAGGGTAGTCGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CAA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTTTGGGTCCCCTCCCTTaGTATGGGAGCTCTGTTTTC +
Preference number: 3 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCLGPLP*YGSSVF
Trigger: GAAAACAGAGCTCCCATACAAAGGGAGGGGACCCAA...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CAA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTCAACGACTACCCTCTTaGGGTCCCCTCCCTTTGTAT +
Preference number: 3 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCQRLPS*GPLPLY
Trigger: ATACAAAGGGAGGGGACCCAAAGAGGGTAGTCGTTG...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CAA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCACCTCCCCAACAGCACTaGGGTTTTCCTGTTGAGAGG +
Preference number: 3 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKAPPQQH*GFPVER
Trigger: CCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAGG...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR CAA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCCAATTAGAGCAGTTGTaGGCCAACCTCCCCAACAGC +
Preference number: 3 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPQLEQL*ANLPNS
Trigger: GCTGTTGGGGAGGTTGGCCAACAACTGCTCTAATTG...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CAA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATGTCGTCCTCCACTCCTaGCATACAAAGAGTTTCTCA +
Preference number: 3 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNVVLHS*HTKSFS
Trigger: TGAGAAACTCTTTGTATGCAAGGAGTGGAGGACGAC...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR CAA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCACAACGACTACCCTCTTaGGGTCCCCTCCCTTTGTAT +
Preference number: 3 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKAQRLPS*GPLPLY
Trigger: ATACAAAGGGAGGGGACCCAAAGAGGGTAGTCGTTG...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR CAA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGATAGCCAATCATCTATaGCCTGAGAGCACAGCGGGA +
Preference number: 3 (lower is better)
Translates to: QCTIQRGMPVSGKLFHREIANHL*PESTAG
Trigger: TCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTAT...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR CAA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCCCTCCCCAACAGCACTaGGGTTTTCCTGTTGAGAGG +
Preference number: 3 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGPPQQH*GFPVER
Trigger: CCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAGG...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CAA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAACCTCCCCAACAGCACTaGGGTTTTCCTGTTGAGAGG +
Preference number: 3 (lower is better)
Translates to: LWTQIPLYRICNKENNTKPPQQH*GFPVER
Trigger: CCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAGG...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR GCA 72 bp GCCTGTGAAGTGTGCCAAAGAAATAATCCCCTGCACTaGAGGCCATACATTTCAATCTCTGTATCTTTAACC +
Preference number: 3 (lower is better)
Translates to: ACEVCQRNNPLH*RPYISISVSLT
Trigger: GGTTAAAGATACAGAGATTGAAATGTATGGCCTGCAGTGCAGGGGATTATTTCTTTGGCACACTTCACAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CAA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGGTCGTCCTCCACTCCTaGCATACAAAGAGTTTCTCA +
Preference number: 3 (lower is better)
Translates to: QCTIQRGMPVSGKLFHREVVLHS*HTKSFS
Trigger: TGAGAAACTCTTTGTATGCAAGGAGTGGAGGACGAC...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR CAA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCATTGCTCACCACAGGGTaGCCACAAACCTTCAGTTTG +
Preference number: 3 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKALLTTG*PQTFSL
Trigger: CAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAA...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR CAA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAATTGGGTCCCCTCCCTTaGTATGGGAGCTCTGTTTTC +
Preference number: 3 (lower is better)
Translates to: LWTQIPLYRICNKENNTKLGPLP*YGSSVF
Trigger: GAAAACAGAGCTCCCATACAAAGGGAGGGGACCCAA...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CAA 90 bp AATACACTAAAGAGAGATAACCAAATGCAATGCAGATTCTGCAATGGATTCTCCTTGGGTCCCCTCCCTTaGTATGGGAGCTCTGTTTTC +
Preference number: 3 (lower is better)
Translates to: NTLKRDNQMQCRFCNGFSLGPLP*YGSSVF
Trigger: GAAAACAGAGCTCCCATACAAAGGGAGGGGACCCAA...GGAGAATCCATTGCAGAATCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR CAA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCCTCCCCAACAGCACTaGGGTTTTCCTGTTGAGAGG +
Preference number: 3 (lower is better)
Translates to: MFSDSEICHTNSLQSILPPPQQH*GFPVER
Trigger: CCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAGG...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CAA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCCAATTAGAGCAGTTGTaGGCCAACCTCCCCAACAGC +
Preference number: 3 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGQLEQL*ANLPNS
Trigger: GCTGTTGGGGAGGTTGGCCAACAACTGCTCTAATTG...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CAA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTCAACGACTACCCTCTTaGGGTCCCCTCCCTTTGTAT +
Preference number: 3 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIQRLPS*GPLPLY
Trigger: ATACAAAGGGAGGGGACCCAAAGAGGGTAGTCGTTG...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR-3UTR CAA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTCAATTAGAGCAGTTGTaGGCCAACCTCCCCAACAGC +
Preference number: 3 (lower is better)
Translates to: DSEICHTNSLQSILPQNVQLEQL*ANLPNS
Trigger: GCTGTTGGGGAGGTTGGCCAACAACTGCTCTAATTG...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CAA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCGTCGTCCTCCACTCCTaGCATACAAAGAGTTTCTCA +
Preference number: 3 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSVVLHS*HTKSFS
Trigger: TGAGAAACTCTTTGTATGCAAGGAGTGGAGGACGAC...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR-3UTR CAA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCATAGCCAATCATCTATaGCCTGAGAGCACAGCGGGA +
Preference number: 3 (lower is better)
Translates to: MFSDSEICHTNSLQSILPIANHL*PESTAG
Trigger: TCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTAT...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR-3UTR CAA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTGTCGTCCTCCACTCCTaGCATACAAAGAGTTTCTCA +
Preference number: 3 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIVVLHS*HTKSFS
Trigger: TGAGAAACTCTTTGTATGCAAGGAGTGGAGGACGAC...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
3UTR TCA 72 bp TACAATGGACTTATGGCGGTTACCAGCTTACCCAAATaGTCAAACTTAGTTTCACTAATGCAAGGACCTGTA +
Preference number: 3 (lower is better)
Translates to: YNGLMAVTSLPK*SNLVSLMQGPV
Trigger: TACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACCGCCATAAGTCCATTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR CCA 72 bp AGTAACCATGACTCTGGGTCATCTGATATCATAATGTaGTTCAAGGTCCACCAATCTTCTGTTTCTTTGATT +
Preference number: 3 (lower is better)
Translates to: SNHDSGSSDIIM*FKVHQSSVSLI
Trigger: AATCAAAGAAACAGAAGATTGGTGGACCTTGAACCACATTATGATATCAGATGACCCAGAGTCATGGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR GCA 72 bp AAACACAATAACTGCAATGCACAATTCAGCGAGGTATaGCTGTATCTGGTAAATTATTTCATAGGGAGTACA +
Preference number: 3 (lower is better)
Translates to: KHNNCNAQFSEV*LYLVNYFIGST
Trigger: TGTACTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTGCAGTTATTGTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CCA 90 bp ATCTACCGCGGACCCCTGGACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACTCGGGTCAGTCAGGCTaGAGCCCCAATCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: IYRGPLDRPASPCSNVNDSGQSG*SPNPQR
Trigger: TCTCTGCGGATTGGGGCTCCAGCCTGACTGACCCGA...GTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAGGGGTCCGCGGTAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp ATCTACCGCGGACCCCTGGACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACCAGCGGGAGGGACAATaGTCAGGATATAAACCCAGG +
Preference number: 4 (lower is better)
Translates to: IYRGPLDRPASPCSNVNDQREGQ*SGYKPR
Trigger: CCTGGGTTTATATCCTGATCATTGTCCCTCCCGCTG...GTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAGGGGTCCGCGGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR CAA 72 bp AAACCCAGGCATTCGAGCCGGCAACGACTACCCTCTTaGGGTCCCCTCCCTTTGTATGGGAGCTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: KPRHSSRQRLPS*GPLPLYGSSVF
Trigger: GAAAACAGAGCTCCCATACAAAGGGAGGGGACCCAAAGAGGGTAGTCGTTGCCGGCTCGAATGCCTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp ATCTACCGCGGACCCCTGGACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACAATGGAACTTCCCAGTaGGATCAGGTGGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: IYRGPLDRPASPCSNVNDNGTSQ*DQVAVV
Trigger: AACTACAGCCACCTGATCTCACTGGGAAGTTCCATT...GTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAGGGGTCCGCGGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGCCCAGATGCAGTCCATaGCTAAAATCTACCGCGGAC +
Preference number: 4 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKPRCSP*LKSTAD
Trigger: GTCCGCGGTAGATTTTAGTCATGGACTGCATCTGGG...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp CTGGACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTATCAGTGCTAGGGAGTaGAGGTCAGACTCACAAACC +
Preference number: 4 (lower is better)
Translates to: LDRPASPCSNVNDIEGTPISARE*RSDSQT
Trigger: GGTTTGTGAGTCTGACCTTCACTCCCTAGCACTGAT...AGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp ATCTACCGCGGACCCCTGGACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACAGGGCCTGTGAAGTGTaGCAAAGAAATAATCCCCTG +
Preference number: 4 (lower is better)
Translates to: IYRGPLDRPASPCSNVNDRACEV*QRNNPL
Trigger: CAGGGGATTATTTCTTTGGCACACTTCACAGGCCCT...GTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAGGGGTCCGCGGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR GCA 90 bp ACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTCCAGAGGGCCTGTGAAGTGTaGCAAAGAAATAATCCCCTG +
Preference number: 4 (lower is better)
Translates to: TGLLAHAPMLMTSKAPLQRACEV*QRNNPL
Trigger: CAGGGGATTATTTCTTTGGCACACTTCACAGGCCCT...CTGGAGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGTCGGGTCAGTCAGGCTaGAGCCCCAATCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GKEIANHLLPESTAGGTMSGQSG*SPNPQR
Trigger: TCTCTGCGGATTGGGGCTCCAGCCTGACTGACCCGA...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGATTTTTCGTACACAGTaGAGGCTTGTCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKIFRTQ*RLVHTP
Trigger: AGGAGTGTGGACAAGCCTTCACTGTGTACGAAAAAT...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp CATCTGCTTCTGCTAAGGGTCTCAGGCTGCTTCCACTCATGGCAGATGATGAAGATCAGTGCTAGGGAGTaGAGGTCAGACTCACAAACC +
Preference number: 4 (lower is better)
Translates to: HLLLLRVSGCFHSWQMMKISARE*RSDSQT
Trigger: GGTTTGTGAGTCTGACCTTCACTCCCTAGCACTGAT...CTTCATCATCTGCCATGAGTGGAAGCAGCCTGAGACCCTTAGCAGAAGCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp ACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTCCAGAATAATCCCCTGCACTaGAGGCCATACATTTCAATC +
Preference number: 4 (lower is better)
Translates to: TGLLAHAPMLMTSKAPLQNNPLH*RPYISI
Trigger: GATTGAAATGTATGGCCTGCAGTGCAGGGGATTATT...CTGGAGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGAATGTTCTAGGTCAGTaGCTCTCTAACTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKNVLGQ*LSNSGW
Trigger: CCAACCAGAGTTAGAGAGCCACTGACCTAGAACATT...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGCAGCGGGAGGGACAATaGTCAGGATATAAACCCAGG +
Preference number: 4 (lower is better)
Translates to: GKEIANHLLPESTAGGTMQREGQ*SGYKPR
Trigger: CCTGGGTTTATATCCTGATCATTGTCCCTCCCGCTG...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp ATCTACCGCGGACCCCTGGACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATTCAGTATGTTCACTaGGCTTGTAAGCAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: IYRGPLDRPASPCSNVNDIQYVH*ACKQGN
Trigger: ATTTCCTTGCTTACAAGCTCAGTGAACATACTGAAT...GTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAGGGGTCCGCGGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp ATCTACCGCGGACCCCTGGACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCACATATTCCCAATaGTCCTGTTCCTTGACTTTA +
Preference number: 4 (lower is better)
Translates to: IYRGPLDRPASPCSNVNDITYSQ*SCSLTL
Trigger: TAAAGTCAAGGAACAGGAGCATTGGGAATATGTGAT...GTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAGGGGTCCGCGGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414720.6
ENST00000630440.2
CDS-3UTR GCA 90 bp ATCTACCGCGGACCCCTGGACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACAGAGAGATAACCAAATaGAATGCAGATTCTGCAATG +
Preference number: 4 (lower is better)
Translates to: IYRGPLDRPASPCSNVNDREITK*NADSAM
Trigger: CATTGCAGAATCTGCATTGCATTTGGTTATCTCTCT...GTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAGGGGTCCGCGGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR GCA 90 bp AGGCTGCTTCCACTCATGGCAGATGATGAAGGGAGAGCCAGTGTATGCAGACATAGGGCCTGTGAAGTGTaGCAAAGAAATAATCCCCTG +
Preference number: 4 (lower is better)
Translates to: RLLPLMADDEGRASVCRHRACEV*QRNNPL
Trigger: CAGGGGATTATTTCTTTGGCACACTTCACAGGCCCT...ATGTCTGCATACACTGGCTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGCTCCCCAACAGCACTTaGGTTTTCCTGTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GKEIANHLLPESTAGGTMLPNST*VFLLRG
Trigger: CCCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAG...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp ACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTCCAGTTAAGAATGAGGAGATaGACCAGGCCTTTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: TGLLAHAPMLMTSKAPLQLRMRR*TRPFQN
Trigger: GTTTTGAAAAGGCCTGGTCCATCTCCTCATTCTTAA...CTGGAGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR GCA 90 bp CTGGACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTATCATCCACAGCAAATaGTTTCCCATATTCCTTACA +
Preference number: 4 (lower is better)
Translates to: LDRPASPCSNVNDIEGTPIIHSK*FPIFLT
Trigger: TGTAAGGAATATGGGAAAGCATTTGCTGTGGATGAT...AGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp ACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTCCAGATGCAATGCAGATTCTaGAATGGATTCTCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: TGLLAHAPMLMTSKAPLQMQCRF*NGFSFE
Trigger: TTCAAAGGAGAATCCATTGCAGAATCTGCATTGCAT...CTGGAGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR GCA 90 bp CTGGACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTAGAGAGATAACCAAATaGAATGCAGATTCTGCAATG +
Preference number: 4 (lower is better)
Translates to: LDRPASPCSNVNDIEGTPREITK*NADSAM
Trigger: CATTGCAGAATCTGCATTGCATTTGGTTATCTCTCT...AGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGTCGGGTCAGTCAGGCTaGAGCCCCAATCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHRESGQSG*SPNPQR
Trigger: TCTCTGCGGATTGGGGCTCCAGCCTGACTGACCCGA...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
CDS-3UTR CCA 90 bp ACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTCCAGAATGTCACTGATCCATaGACCATGTTGCTAGAATTA +
Preference number: 4 (lower is better)
Translates to: TGLLAHAPMLMTSKAPLQNVTDP*TMLLEL
Trigger: TAATTCTAGCAACATGGTCCATGGATCAGTGACATT...CTGGAGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp CTGGACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTTATGGGCAGAATTTGTaGTATCCCAAAGCAATTACA +
Preference number: 4 (lower is better)
Translates to: LDRPASPCSNVNDIEGTPYGQNL*YPKAIT
Trigger: TGTAATTGCTTTGGGATACCACAAATTCTGCCCATA...AGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp CTGGACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTTCTGATATCATAATGTaGTTCAAGGTCCACCAATCT +
Preference number: 4 (lower is better)
Translates to: LDRPASPCSNVNDIEGTPSDIIM*FKVHQS
Trigger: AGATTGGTGGACCTTGAACCACATTATGATATCAGA...AGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGGATAACCAAATGCAATaGAGATTCTGCAATGGATTC +
Preference number: 4 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKDNQMQ*RFCNGF
Trigger: GAATCCATTGCAGAATCTGCATTGCATTTGGTTATC...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR GCA 90 bp ACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTCCAGTCTGACAGTGAAATATaGCATACAAATAGCCTACAA +
Preference number: 4 (lower is better)
Translates to: TGLLAHAPMLMTSKAPLQSDSEI*HTNSLQ
Trigger: TTGTAGGCTATTTGTATGGCATATTTCACTGTCAGA...CTGGAGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCATCGGGTCAGTCAGGCTaGAGCCCCAATCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKASGQSG*SPNPQR
Trigger: TCTCTGCGGATTGGGGCTCCAGCCTGACTGACCCGA...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
CDS-3UTR CCA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGCAAGGAAATAGTCTATaGATGCCTTCTCTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKQGNSL*MPSLLL
Trigger: TAAAAGCAGAGAAGGCATCCATAGACTATTTCCTTG...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp AGGCTGCTTCCACTCATGGCAGATGATGAAGGGAGAGCCAGTGTATGCAGACATAATGTACAAGAATCATaGTGCAGCATCTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RLLPLMADDEGRASVCRHNVQES*CSICFC
Trigger: GCAGAAGCAGATGCTGCACCATGATTCTTGTACATT...ATGTCTGCATACACTGGCTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGCTCACATACCAGCCATaGTGTATAGGTGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: GKEIANHLLPESTAGGTMLTYQP*CIGADD
Trigger: ATCATCAGCACCTATACATCATGGCTGGTATGTGAG...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp CATCTGCTTCTGCTAAGGGTCTCAGGCTGCTTCCACTCATGGCAGATGATGAAGTTAAGAATGAGGAGATaGACCAGGCCTTTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: HLLLLRVSGCFHSWQMMKLRMRR*TRPFQN
Trigger: GTTTTGAAAAGGCCTGGTCCATCTCCTCATTCTTAA...CTTCATCATCTGCCATGAGTGGAAGCAGCCTGAGACCCTTAGCAGAAGCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGCTCTCTAACTCTGGTTaGTATCACAATCACCTGGAG +
Preference number: 4 (lower is better)
Translates to: GKEIANHLLPESTAGGTMLSNSG*YHNHLE
Trigger: CTCCAGGTGATTGTGATACCAACCAGAGTTAGAGAG...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR CAA 72 bp GCAAAAACAGGAGGTAAAGAAATAGCCAATCATCTATaGCCTGAGAGCACAGCGGGAGGGACAATGATCAGG +
Preference number: 4 (lower is better)
Translates to: AKTGGKEIANHL*PESTAGGTMIR
Trigger: CCTGATCATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACCTCCTGTTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTGTTGAGAGGGGGTACTaGGAAACAGGACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCVERGY*ETGLAG
Trigger: TCCTGCTAGTCCTGTTTCTCAGTACCCCCTCTCAAC...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp CATCTGCTTCTGCTAAGGGTCTCAGGCTGCTTCCACTCATGGCAGATGATGAAGCAATTACCAAAACTGTaGAGCAGCAACAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: HLLLLRVSGCFHSWQMMKQLPKL*SSNNVK
Trigger: TTTGACATTGTTGCTGCTTCACAGTTTTGGTAATTG...CTTCATCATCTGCCATGAGTGGAAGCAGCCTGAGACCCTTAGCAGAAGCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCAGAGAAAACAAGAGGGTaGGGGAGGAGGTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKAEKTRG*GRRCQV
Trigger: AACCTGGCACCTCCTCCCTCACCCTCTTGTTTTCTC...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp CATCTGCTTCTGCTAAGGGTCTCAGGCTGCTTCCACTCATGGCAGATGATGAAGAGAGAGATAACCAAATaGAATGCAGATTCTGCAATG +
Preference number: 4 (lower is better)
Translates to: HLLLLRVSGCFHSWQMMKREITK*NADSAM
Trigger: CATTGCAGAATCTGCATTGCATTTGGTTATCTCTCT...CTTCATCATCTGCCATGAGTGGAAGCAGCCTGAGACCCTTAGCAGAAGCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGAATAATCCCCTGCACTaGAGGCCATACATTTCAATC +
Preference number: 4 (lower is better)
Translates to: GKEIANHLLPESTAGGTMNNPLH*RPYISI
Trigger: GATTGAAATGTATGGCCTGCAGTGCAGGGGATTATT...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR GCA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATGGGAGAGCCAGTGTATaGAGACATCACATGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNGRASV*RHHMAR
Trigger: TCTTGCCATGTGATGTCTGCATACACTGGCTCTCCC...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTTCGGGTCAGTCAGGCTaGAGCCCCAATCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRISGQSG*SPNPQR
Trigger: TCTCTGCGGATTGGGGCTCCAGCCTGACTGACCCGA...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
CDS-3UTR CCA 90 bp AGGCTGCTTCCACTCATGGCAGATGATGAAGGGAGAGCCAGTGTATGCAGACATTCCAGGTCCTTCTTTTaGATAAAAATACGATCTGAG +
Preference number: 4 (lower is better)
Translates to: RLLPLMADDEGRASVCRHSRSFF*IKIRSE
Trigger: CTCAGATCGTATTTTTATCCAAAAGAAGGACCTGGA...ATGTCTGCATACACTGGCTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGTTTACAATGGACTTATaGCGGTTACCAGCTTACCCA +
Preference number: 4 (lower is better)
Translates to: GKEIANHLLPESTAGGTMFTMDL*RLPAYP
Trigger: TGGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAA...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp AGGCTGCTTCCACTCATGGCAGATGATGAAGGGAGAGCCAGTGTATGCAGACATATTAGATCTTTACAATaGACTTATGGCGGTTACCAG +
Preference number: 4 (lower is better)
Translates to: RLLPLMADDEGRASVCRHIRSLQ*TYGGYQ
Trigger: CTGGTAACCGCCATAAGTCCATTGTAAAGATCTAAT...ATGTCTGCATACACTGGCTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGGGCTGCTTCCACTCATaGCAGATGATGAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHREGCFHS*QMMKGE
Trigger: CTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCC...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATAATGGAACTTCCCAGTaGGATCAGGTGGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNNGTSQ*DQVAVV
Trigger: AACTACAGCCACCTGATCTCACTGGGAAGTTCCATT...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
CDS-3UTR TCA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGGGCTTGTCACCAGTATaGATTCGAGAATGTTCAATA +
Preference number: 4 (lower is better)
Translates to: GKEIANHLLPESTAGGTMGLSPV*IRECSI
Trigger: TATTGAACATTCTCGAATTCATACTGGTGACAAGCC...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCAGTTGAGAGGGGGTACTaGGAAACAGGACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKAVERGY*ETGLAG
Trigger: TCCTGCTAGTCCTGTTTCTCAGTACCCCCTCTCAAC...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp AGGCTGCTTCCACTCATGGCAGATGATGAAGGGAGAGCCAGTGTATGCAGACATTCTGACAGTGAAATATaGCATACAAATAGCCTACAA +
Preference number: 4 (lower is better)
Translates to: RLLPLMADDEGRASVCRHSDSEI*HTNSLQ
Trigger: TTGTAGGCTATTTGTATGGCATATTTCACTGTCAGA...ATGTCTGCATACACTGGCTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGTTAAGAATGAGGAGATaGACCAGGCCTTTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: GKEIANHLLPESTAGGTMLRMRR*TRPFQN
Trigger: GTTTTGAAAAGGCCTGGTCCATCTCCTCATTCTTAA...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGATGCTGAATAACGTTTaGACCACAAATGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GKEIANHLLPESTAGGTMMLNNV*TTNEAF
Trigger: AAAGGCTTCATTTGTGGTTCAAACGTTATTCAGCAT...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGAATCTCTCTAATTCATaGTGCCACAATGGTATCATG +
Preference number: 4 (lower is better)
Translates to: GKEIANHLLPESTAGGTMNLSNS*CHNGIM
Trigger: CATGATACCATTGTGGCATCATGAATTAGAGAGATT...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTAGGGATCTTCCACCATaGCCCAAACACCTTCCATTA +
Preference number: 4 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCRDLPP*PKHLPL
Trigger: TAATGGAAGGTGTTTGGGTCATGGTGGAAGATCCCT...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTGAGAAAACAAGAGGGTaGGGGAGGAGGTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIEKTRG*GRRCQV
Trigger: AACCTGGCACCTCCTCCCTCACCCTCTTGTTTTCTC...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCGGAACTTCCTGCCAGTaGGATCAGGTGGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSGTSCQ*DQVAVV
Trigger: AACTACAGCCACCTGATCTCACTGGCAGGAAGTTCC...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455521.5
ENST00000630528.2
CDS-3UTR GCA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGCAATTCAGCGAGGTATaGCTGTATCTGGTAAATTAT +
Preference number: 4 (lower is better)
Translates to: GKEIANHLLPESTAGGTMQFSEV*LYLVNY
Trigger: ATAATTTACCAGATACAGGCATACCTCGCTGAATTG...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAACTCCCCAACAGCACTTaGGTTTTCCTGTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LWTQIPLYRICNKENNTKLPNST*VFLLRG
Trigger: CCCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAG...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATAATGTTCTAGGTCAGTaGCTCTCTAACTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNNVLGQ*LSNSGW
Trigger: CCAACCAGAGTTAGAGAGCCACTGACCTAGAACATT...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGATTTTTCGTACACAGTaGAGGCTTGTCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHREIFRTQ*RLVHTP
Trigger: AGGAGTGTGGACAAGCCTTCACTGTGTACGAAAAAT...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR TCA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATTGTGACATAAAGACATaGAATGCACACCTGACGTTG +
Preference number: 4 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNCDIKT*NAHLTL
Trigger: CAACGTCAGGTGTGCATTTCATGTCTTTATGTCACA...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR TCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTCAGCGGGAGGGACAATaGTCAGGATATAAACCCAGG +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIQREGQ*SGYKPR
Trigger: CCTGGGTTTATATCCTGATCATTGTCCCTCCCGCTG...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTGTTGAGAGGGGGTACTaGGAAACAGGACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: DSEICHTNSLQSILPQNVVERGY*ETGLAG
Trigger: TCCTGCTAGTCCTGTTTCTCAGTACCCCCTCTCAAC...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTGTTGAGAGGGGGTACTaGGAAACAGGACTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIVERGY*ETGLAG
Trigger: TCCTGCTAGTCCTGTTTCTCAGTACCCCCTCTCAAC...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTCCCAGATGCAGTCCATaGCTAAAATCTACCGCGGAC +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIPRCSP*LKSTAD
Trigger: GTCCGCGGTAGATTTTAGTCATGGACTGCATCTGGG...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTCTCACATACCAGCCATaGTGTATAGGTGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCLTYQP*CIGADD
Trigger: ATCATCAGCACCTATACATCATGGCTGGTATGTGAG...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGCTCACATACCAGCCATaGTGTATAGGTGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHRELTYQP*CIGADD
Trigger: ATCATCAGCACCTATACATCATGGCTGGTATGTGAG...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCCTCACATACCAGCCATaGTGTATAGGTGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPLTYQP*CIGADD
Trigger: ATCATCAGCACCTATACATCATGGCTGGTATGTGAG...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTGGAACTTCCTGCCAGTaGGATCAGGTGGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIGTSCQ*DQVAVV
Trigger: AACTACAGCCACCTGATCTCACTGGCAGGAAGTTCC...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455521.5
ENST00000630528.2
CDS-3UTR GCA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCGGGAGAGCCAGTGTATaGAGACATCACATGGCAAGA +
Preference number: 4 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGGRASV*RHHMAR
Trigger: TCTTGCCATGTGATGTCTGCATACACTGGCTCTCCC...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCAACTCATTCTTCAAATaGAGCCCCAGATGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPNSFFK*SPRCSP
Trigger: TGGACTGCATCTGGGGCTCCATTTGAAGAATGAGTT...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGCTCTCTAACTCTGGTTaGTATCACAATCACCTGGAG +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHRELSNSG*YHNHLE
Trigger: CTCCAGGTGATTGTGATACCAACCAGAGTTAGAGAG...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTGGCTGCTTCCACTCATaGCAGATGATGAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIGCFHS*QMMKGE
Trigger: CTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCC...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCAATGGAACTTCCCAGTaGGATCAGGTGGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSNGTSQ*DQVAVV
Trigger: AACTACAGCCACCTGATCTCACTGGGAAGTTCCATT...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
CDS-3UTR TCA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATGGCTTGTCACCAGTATaGATTCGAGAATGTTCAATA +
Preference number: 4 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNGLSPV*IRECSI
Trigger: TATTGAACATTCTCGAATTCATACTGGTGACAAGCC...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR TCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCAATTTTTCGTACACAGTaGAGGCTTGTCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKAIFRTQ*RLVHTP
Trigger: AGGAGTGTGGACAAGCCTTCACTGTGTACGAAAAAT...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR TCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGTGTGACATAAAGACATaGAATGCACACCTGACGTTG +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHRECDIKT*NAHLTL
Trigger: CAACGTCAGGTGTGCATTTCATGTCTTTATGTCACA...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR TCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGCCAAAATGTTTAATCTaGCCTAACAGAGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHREPKCLI*PNRASG
Trigger: TCCAGAGGCTCTGTTAGGTCAGATTAAACATTTTGG...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAAAGGGATCTTCCACCATaGCCCAAACACCTTCCATTA +
Preference number: 4 (lower is better)
Translates to: LWTQIPLYRICNKENNTKRDLPP*PKHLPL
Trigger: TAATGGAAGGTGTTTGGGTCATGGTGGAAGATCCCT...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATCATAAAGACATGAAATaGACACCTGACGTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNHKDMK*TPDVGK
Trigger: TTTCCCAACGTCAGGTGTGCATTTCATGTCTTTATG...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR GCA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTAATAATCCCCTGCACTaGAGGCCATACATTTCAATC +
Preference number: 4 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCNNPLH*RPYISI
Trigger: GATTGAAATGTATGGCCTGCAGTGCAGGGGATTATT...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR GCA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCAGGGCCTGTGAAGTGTaGCAAAGAAATAATCCCCTG +
Preference number: 4 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGRACEV*QRNNPL
Trigger: CAGGGGATTATTTCTTTGGCACACTTCACAGGCCCT...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTAATGGAACTTCCCAGTaGGATCAGGTGGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: DSEICHTNSLQSILPQNVNGTSQ*DQVAVV
Trigger: AACTACAGCCACCTGATCTCACTGGGAAGTTCCATT...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTAATGGAACTTCCCAGTaGGATCAGGTGGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRINGTSQ*DQVAVV
Trigger: AACTACAGCCACCTGATCTCACTGGGAAGTTCCATT...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
CDS-3UTR TCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGGGCTTGTCACCAGTATaGATTCGAGAATGTTCAATA +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHREGLSPV*IRECSI
Trigger: TATTGAACATTCTCGAATTCATACTGGTGACAAGCC...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR TCA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTGGCTTGTCACCAGTATaGATTCGAGAATGTTCAATA +
Preference number: 4 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCGLSPV*IRECSI
Trigger: TATTGAACATTCTCGAATTCATACTGGTGACAAGCC...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCACCAAAATGTTTAATCTaGCCTAACAGAGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKAPKCLI*PNRASG
Trigger: TCCAGAGGCTCTGTTAGGTCAGATTAAACATTTTGG...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATACCAGCTTACCCAAATaGTCAAACTTAGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNTSLPK*SNLVSL
Trigger: TAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGT...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGCATAAAGACATGAAATaGACACCTGACGTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHREHKDMK*TPDVGK
Trigger: TTTCCCAACGTCAGGTGTGCATTTCATGTCTTTATG...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR GCA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATGATAACCAAATGCAATaGAGATTCTGCAATGGATTC +
Preference number: 4 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNDNQMQ*RFCNGF
Trigger: GAATCCATTGCAGAATCTGCATTGCATTTGGTTATC...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATTATGGGCAGAATTTGTaGTATCCCAAAGCAATTACA +
Preference number: 4 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNYGQNL*YPKAIT
Trigger: TGTAATTGCTTTGGGATACCACAAATTCTGCCCATA...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CCA 90 bp AATACACTAAAGAGAGATAACCAAATGCAATGCAGATTCTGCAATGGATTCTCCAACTCATTCTTCAAATaGAGCCCCAGATGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: NTLKRDNQMQCRFCNGFSNSFFK*SPRCSP
Trigger: TGGACTGCATCTGGGGCTCCATTTGAAGAATGAGTT...GGAGAATCCATTGCAGAATCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp CCTCCCTTTGTATGGGAGCTCTGTTTTCACTCTATTAAATCTTGCAACAAAATTAACTCATTCTTCAAATaGAGCCCCAGATGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: PPFVWELCFHSIKSCNKINSFFK*SPRCSP
Trigger: TGGACTGCATCTGGGGCTCCATTTGAAGAATGAGTT...AATTTTGTTGCAAGATTTAATAGAGTGAAAACAGAGCTCCCATACAAAGGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414720.6
ENST00000630440.2
CDS-3UTR CCA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTTTAAGAATGAGGAGATaGACCAGGCCTTTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCLRMRR*TRPFQN
Trigger: GTTTTGAAAAGGCCTGGTCCATCTCCTCATTCTTAA...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
3UTR CAA 72 bp CTAAGTGCCACTGTTGATTCTAATACCTACCAAAATTaGAGCGCCTACATTCATAGGATTTCCAGGCTACAA +
Preference number: 4 (lower is better)
Translates to: LSATVDSNTYQN*SAYIHRISRLQ
Trigger: TTGTAGCCTGGAAATCCTATGAATGTAGGCGCTCAAATTTTGGTAGGTATTAGAATCAACAGTGGCACTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGATGCTGAATAACGTTTaGACCACAAATGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHREMLNNV*TTNEAF
Trigger: AAAGGCTTCATTTGTGGTTCAAACGTTATTCAGCAT...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR TCA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCATTTTTCGTACACAGTaGAGGCTTGTCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: MFSDSEICHTNSLQSILPIFRTQ*RLVHTP
Trigger: AGGAGTGTGGACAAGCCTTCACTGTGTACGAAAAAT...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCTGTGACATAAAGACATaGAATGCACACCTGACGTTG +
Preference number: 4 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGCDIKT*NAHLTL
Trigger: CAACGTCAGGTGTGCATTTCATGTCTTTATGTCACA...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCTGTGACATAAAGACATaGAATGCACACCTGACGTTG +
Preference number: 4 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSCDIKT*NAHLTL
Trigger: CAACGTCAGGTGTGCATTTCATGTCTTTATGTCACA...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR TCA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCACCAGCTTACCCAAATaGTCAAACTTAGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPTSLPK*SNLVSL
Trigger: TAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGT...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTGATCAAACTTCAACATaGGATTTGGAGGGACAAATA +
Preference number: 4 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCDQTST*DLEGQI
Trigger: TATTTGTCCCTCCAAATCTCATGTTGAAGTTTGATC...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGAATCTGGATACCGTCTaGTTGTTTCTTTCCTTACAA +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHRENLDTV*LFLSLQ
Trigger: TTGTAAGGAAAGAAACAAGCAGACGGTATCCAGATT...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR GCA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCAATCTGGATACCGTCTaGTTGTTTCTTTCCTTACAA +
Preference number: 4 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPNLDTV*LFLSLQ
Trigger: TTGTAAGGAAAGAAACAAGCAGACGGTATCCAGATT...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR GCA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTATGCAATGCAGATTCTaGAATGGATTCTCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCMQCRF*NGFSFE
Trigger: TTCAAAGGAGAATCCATTGCAGAATCTGCATTGCAT...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR GCA 90 bp CCTCCCTTTGTATGGGAGCTCTGTTTTCACTCTATTAAATCTTGCAACAAAATTAATAATCCCCTGCACTaGAGGCCATACATTTCAATC +
Preference number: 4 (lower is better)
Translates to: PPFVWELCFHSIKSCNKINNPLH*RPYISI
Trigger: GATTGAAATGTATGGCCTGCAGTGCAGGGGATTATT...AATTTTGTTGCAAGATTTAATAGAGTGAAAACAGAGCTCCCATACAAAGGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414720.6
ENST00000630440.2
CDS-3UTR CCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGAATGTCACTGATCCATaGACCATGTTGCTAGAATTA +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHRENVTDP*TMLLEL
Trigger: TAATTCTAGCAACATGGTCCATGGATCAGTGACATT...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGTATGGGCAGAATTTGTaGTATCCCAAAGCAATTACA +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHREYGQNL*YPKAIT
Trigger: TGTAATTGCTTTGGGATACCACAAATTCTGCCCATA...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CCA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCTATGGGCAGAATTTGTaGTATCCCAAAGCAATTACA +
Preference number: 4 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPYGQNL*YPKAIT
Trigger: TGTAATTGCTTTGGGATACCACAAATTCTGCCCATA...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGGTTTACCATCTTTTATaGGCAGAATTTGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHREVYHLL*AEFVVS
Trigger: GGATACCACAAATTCTGCCCATAAAAGATGGTAAAC...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTAACTCATTCTTCAAATaGAGCCCCAGATGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRINSFFK*SPRCSP
Trigger: TGGACTGCATCTGGGGCTCCATTTGAAGAATGAGTT...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAATTTACAATGGACTTATaGCGGTTACCAGCTTACCCA +
Preference number: 4 (lower is better)
Translates to: LWTQIPLYRICNKENNTKFTMDL*RLPAYP
Trigger: TGGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAA...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp AATACACTAAAGAGAGATAACCAAATGCAATGCAGATTCTGCAATGGATTCTCCTTTACAATGGACTTATaGCGGTTACCAGCTTACCCA +
Preference number: 4 (lower is better)
Translates to: NTLKRDNQMQCRFCNGFSFTMDL*RLPAYP
Trigger: TGGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAA...GGAGAATCCATTGCAGAATCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCATTAGATCTTTACAATaGACTTATGGCGGTTACCAG +
Preference number: 4 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPIRSLQ*TYGGYQ
Trigger: CTGGTAACCGCCATAAGTCCATTGTAAAGATCTAAT...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTCAAGGAAATAGTCTATaGATGCCTTCTCTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCQGNSL*MPSLLL
Trigger: TAAAAGCAGAGAAGGCATCCATAGACTATTTCCTTG...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCGGCTTGTCACCAGTATaGATTCGAGAATGTTCAATA +
Preference number: 4 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSGLSPV*IRECSI
Trigger: TATTGAACATTCTCGAATTCATACTGGTGACAAGCC...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR TCA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTCCAAAATGTTTAATCTaGCCTAACAGAGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: DSEICHTNSLQSILPQNVPKCLI*PNRASG
Trigger: TCCAGAGGCTCTGTTAGGTCAGATTAAACATTTTGG...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCCAAAATGTTTAATCTaGCCTAACAGAGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: MFSDSEICHTNSLQSILPPKCLI*PNRASG
Trigger: TCCAGAGGCTCTGTTAGGTCAGATTAAACATTTTGG...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR GCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCAAATCTGGATACCGTCTaGTTGTTTCTTTCCTTACAA +
Preference number: 4 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKANLDTV*LFLSLQ
Trigger: TTGTAAGGAAAGAAACAAGCAGACGGTATCCAGATT...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR GCA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCCATAAAGACATGAAATaGACACCTGACGTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGHKDMK*TPDVGK
Trigger: TTTCCCAACGTCAGGTGTGCATTTCATGTCTTTATG...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCAGTTTACCATCTTTTATaGGCAGAATTTGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKAVYHLL*AEFVVS
Trigger: GGATACCACAAATTCTGCCCATAAAAGATGGTAAAC...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CCA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTTTTACAATGGACTTATaGCGGTTACCAGCTTACCCA +
Preference number: 4 (lower is better)
Translates to: DSEICHTNSLQSILPQNVFTMDL*RLPAYP
Trigger: TGGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAA...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTAATGTACAAGAATCATaGTGCAGCATCTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRINVQES*CSICFC
Trigger: GCAGAAGCAGATGCTGCACCATGATTCTTGTACATT...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGATAAAGAGGTTTATTTaGCTCACTGTTCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: QCTIQRGMPVSGKLFHREIKRFI*LTVLQN
Trigger: ATTCTGCAGAACAGTGAGCCAAATAAACCTCTTTAT...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR CAA 72 bp ACCAAATGCAATGCAGATTCTGCAATGGATTCTCCTTaGAATATGAATAGCTGTAAAAGATGGTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TKCNADSAMDSP*NMNSCKRWFGS
Trigger: GCTTCCAAACCATCTTTTACAGCTATTCATATTCAAAGGAGAATCCATTGCAGAATCTGCATTGCATTTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTGGCTTGTCACCAGTATaGATTCGAGAATGTTCAATA +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIGLSPV*IRECSI
Trigger: TATTGAACATTCTCGAATTCATACTGGTGACAAGCC...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR TCA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAAAATCTCTCTAATTCATaGTGCCACAATGGTATCATG +
Preference number: 4 (lower is better)
Translates to: LWTQIPLYRICNKENNTKNLSNS*CHNGIM
Trigger: CATGATACCATTGTGGCATCATGAATTAGAGAGATT...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCCAATTACCAAAACTGTaGAGCAGCAACAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGQLPKL*SSNNVK
Trigger: TTTGACATTGTTGCTGCTTCACAGTTTTGGTAATTG...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCAATCTGGATACCGTCTaGTTGTTTCTTTCCTTACAA +
Preference number: 4 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSNLDTV*LFLSLQ
Trigger: TTGTAAGGAAAGAAACAAGCAGACGGTATCCAGATT...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR GCA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAAATCATCCACAGCAAATaGTTTCCCATATTCCTTACA +
Preference number: 4 (lower is better)
Translates to: LWTQIPLYRICNKENNTKIIHSK*FPIFLT
Trigger: TGTAAGGAATATGGGAAAGCATTTGCTGTGGATGAT...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCCAATTCAGCGAGGTATaGCTGTATCTGGTAAATTAT +
Preference number: 4 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSQFSEV*LYLVNY
Trigger: ATAATTTACCAGATACAGGCATACCTCGCTGAATTG...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR GCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTCATAAAGACATGAAATaGACACCTGACGTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIHKDMK*TPDVGK
Trigger: TTTCCCAACGTCAGGTGTGCATTTCATGTCTTTATG...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR GCA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAAGATAACCAAATGCAATaGAGATTCTGCAATGGATTC +
Preference number: 4 (lower is better)
Translates to: LWTQIPLYRICNKENNTKDNQMQ*RFCNGF
Trigger: GAATCCATTGCAGAATCTGCATTGCATTTGGTTATC...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR GCA 90 bp CCTCCCTTTGTATGGGAGCTCTGTTTTCACTCTATTAAATCTTGCAACAAAATTAGAGAGATAACCAAATaGAATGCAGATTCTGCAATG +
Preference number: 4 (lower is better)
Translates to: PPFVWELCFHSIKSCNKIREITK*NADSAM
Trigger: CATTGCAGAATCTGCATTGCATTTGGTTATCTCTCT...AATTTTGTTGCAAGATTTAATAGAGTGAAAACAGAGCTCCCATACAAAGGGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414720.6
ENST00000630440.2
CDS-3UTR GCA 90 bp AATACACTAAAGAGAGATAACCAAATGCAATGCAGATTCTGCAATGGATTCTCCTTTGGCTCACTGTTCTaGAGAATGTACAAGAATCAT +
Preference number: 4 (lower is better)
Translates to: NTLKRDNQMQCRFCNGFSFGSLF*RMYKNH
Trigger: ATGATTCTTGTACATTCTGCAGAACAGTGAGCCAAA...GGAGAATCCATTGCAGAATCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCTTTGGCTCACTGTTCTaGAGAATGTACAAGAATCAT +
Preference number: 4 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSFGSLF*RMYKNH
Trigger: ATGATTCTTGTACATTCTGCAGAACAGTGAGCCAAA...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCTCCAGGTCCTTCTTTTaGATAAAAATACGATCTGAG +
Preference number: 4 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSSRSFF*IKIRSE
Trigger: CTCAGATCGTATTTTTATCCAAAAGAAGGACCTGGA...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
CDS-3UTR CCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCAATGTCACTGATCCATaGACCATGTTGCTAGAATTA +
Preference number: 4 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSNVTDP*TMLLEL
Trigger: TAATTCTAGCAACATGGTCCATGGATCAGTGACATT...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CCA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAAAATGTCACTGATCCATaGACCATGTTGCTAGAATTA +
Preference number: 4 (lower is better)
Translates to: LWTQIPLYRICNKENNTKNVTDP*TMLLEL
Trigger: TAATTCTAGCAACATGGTCCATGGATCAGTGACATT...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCTATGGGCAGAATTTGTaGTATCCCAAAGCAATTACA +
Preference number: 4 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSYGQNL*YPKAIT
Trigger: TGTAATTGCTTTGGGATACCACAAATTCTGCCCATA...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CCA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCGTTTACCATCTTTTATaGGCAGAATTTGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGVYHLL*AEFVVS
Trigger: GGATACCACAAATTCTGCCCATAAAAGATGGTAAAC...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCGTTTACCATCTTTTATaGGCAGAATTTGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSVYHLL*AEFVVS
Trigger: GGATACCACAAATTCTGCCCATAAAAGATGGTAAAC...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CCA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAAGTTTACCATCTTTTATaGGCAGAATTTGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: LWTQIPLYRICNKENNTKVYHLL*AEFVVS
Trigger: GGATACCACAAATTCTGCCCATAAAAGATGGTAAAC...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCATTAGATCTTTACAATaGACTTATGGCGGTTACCAG +
Preference number: 4 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGIRSLQ*TYGGYQ
Trigger: CTGGTAACCGCCATAAGTCCATTGTAAAGATCTAAT...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCTCTGATATCATAATGTaGTTCAAGGTCCACCAATCT +
Preference number: 4 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGSDIIM*FKVHQS
Trigger: AGATTGGTGGACCTTGAACCACATTATGATATCAGA...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTATGCTGAATAACGTTTaGACCACAAATGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIMLNNV*TTNEAF
Trigger: AAAGGCTTCATTTGTGGTTCAAACGTTATTCAGCAT...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR TCA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTACCAGCTTACCCAAATaGTCAAACTTAGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: DSEICHTNSLQSILPQNVTSLPK*SNLVSL
Trigger: TAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGT...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTAATCTCTCTAATTCATaGTGCCACAATGGTATCATG +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRINLSNS*CHNGIM
Trigger: CATGATACCATTGTGGCATCATGAATTAGAGAGATT...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCAATCTCTCTAATTCATaGTGCCACAATGGTATCATG +
Preference number: 4 (lower is better)
Translates to: MFSDSEICHTNSLQSILPNLSNS*CHNGIM
Trigger: CATGATACCATTGTGGCATCATGAATTAGAGAGATT...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR TCA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTATTCAGTATGTTCACTaGGCTTGTAAGCAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: DSEICHTNSLQSILPQNVIQYVH*ACKQGN
Trigger: ATTTCCTTGCTTACAAGCTCAGTGAACATACTGAAT...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR TCA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCGATCAAACTTCAACATaGGATTTGGAGGGACAAATA +
Preference number: 4 (lower is better)
Translates to: MFSDSEICHTNSLQSILPDQTST*DLEGQI
Trigger: TATTTGTCCCTCCAAATCTCATGTTGAAGTTTGATC...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR GCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTAATCTGGATACCGTCTaGTTGTTTCTTTCCTTACAA +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRINLDTV*LFLSLQ
Trigger: TTGTAAGGAAAGAAACAAGCAGACGGTATCCAGATT...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR GCA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCATCACATATTCCCAATaGTCCTGTTCCTTGACTTTA +
Preference number: 4 (lower is better)
Translates to: MFSDSEICHTNSLQSILPITYSQ*SCSLTL
Trigger: TAAAGTCAAGGAACAGGAGCATTGGGAATATGTGAT...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414720.6
ENST00000630440.2
CDS-3UTR GCA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTATGCAATGCAGATTCTaGAATGGATTCTCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: DSEICHTNSLQSILPQNVMQCRF*NGFSFE
Trigger: TTCAAAGGAGAATCCATTGCAGAATCTGCATTGCAT...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR GCA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCGATAACCAAATGCAATaGAGATTCTGCAATGGATTC +
Preference number: 4 (lower is better)
Translates to: MFSDSEICHTNSLQSILPDNQMQ*RFCNGF
Trigger: GAATCCATTGCAGAATCTGCATTGCATTTGGTTATC...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR GCA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCTCTGACAGTGAAATATaGCATACAAATAGCCTACAA +
Preference number: 4 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSSDSEI*HTNSLQ
Trigger: TTGTAGGCTATTTGTATGGCATATTTCACTGTCAGA...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTTCCAGGTCCTTCTTTTaGATAAAAATACGATCTGAG +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRISRSFF*IKIRSE
Trigger: CTCAGATCGTATTTTTATCCAAAAGAAGGACCTGGA...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
CDS-3UTR CCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTAATGTCACTGATCCATaGACCATGTTGCTAGAATTA +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRINVTDP*TMLLEL
Trigger: TAATTCTAGCAACATGGTCCATGGATCAGTGACATT...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CCA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCAATGTCACTGATCCATaGACCATGTTGCTAGAATTA +
Preference number: 4 (lower is better)
Translates to: MFSDSEICHTNSLQSILPNVTDP*TMLLEL
Trigger: TAATTCTAGCAACATGGTCCATGGATCAGTGACATT...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTTATGGGCAGAATTTGTaGTATCCCAAAGCAATTACA +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIYGQNL*YPKAIT
Trigger: TGTAATTGCTTTGGGATACCACAAATTCTGCCCATA...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CCA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTGTTTACCATCTTTTATaGGCAGAATTTGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRIVYHLL*AEFVVS
Trigger: GGATACCACAAATTCTGCCCATAAAAGATGGTAAAC...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CCA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCATTAGATCTTTACAATaGACTTATGGCGGTTACCAG +
Preference number: 4 (lower is better)
Translates to: MFSDSEICHTNSLQSILPIRSLQ*TYGGYQ
Trigger: CTGGTAACCGCCATAAGTCCATTGTAAAGATCTAAT...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CCA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCATAAAGAGGTTTATTTaGCTCACTGTTCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGIKRFI*LTVLQN
Trigger: ATTCTGCAGAACAGTGAGCCAAATAAACCTCTTTAT...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
3UTR CAA 72 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTaGTGGTATCCCAAAGCAATTACAATAGCAACATCA +
Preference number: 4 (lower is better)
Translates to: VSTRFTIFYGQN*WYPKAITIATS
Trigger: TGATGTTGCTATTGTAATTGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CAA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGTCGGGCTTCTCCCCCTaGACTTTAGGTGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKSGFSP*TLGVQQ
Trigger: CTGCTGCACACCTAAAGTCAAGGGGGAGAAGCCCGA...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGCCTCCCCAACAGCACTaGGGTTTTCCTGTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKPPQQH*GFPVER
Trigger: CCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAGG...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp CTGGACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTCAATGCTCCTGTTCCTaGACTTTAGGTGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LDRPASPCSNVNDIEGTPQCSCS*TLGVQQ
Trigger: CTGCTGCACACCTAAAGTCAAGGAACAGGAGCATTG...AGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414720.6
ENST00000630440.2
CDS-3UTR CAA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGCAACGACTACCCTCTTaGGGTCCCCTCCCTTTGTAT +
Preference number: 5 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKQRLPS*GPLPLY
Trigger: ATACAAAGGGAGGGGACCCAAAGAGGGTAGTCGTTG...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGTTGCTCACCACAGGGTaGCCACAAACCTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKLLTTG*PQTFSL
Trigger: CAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAA...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGATAGCCAATCATCTATaGCCTGAGAGCACAGCGGGA +
Preference number: 5 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKIANHL*PESTAG
Trigger: TCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTAT...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp AGGCTGCTTCCACTCATGGCAGATGATGAAGGGAGAGCCAGTGTATGCAGACATCCTCCCCAACAGCACTaGGGTTTTCCTGTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: RLLPLMADDEGRASVCRHPPQQH*GFPVER
Trigger: CCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAGG...ATGTCTGCATACACTGGCTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp ACCGGCCTGCTAGCCCATGCTCCAATGTTAATGACATCGAAGGCACCCCTCCAGCTGGATACCGTCTGCTaGTTTCTTTCCTTACAACCA +
Preference number: 5 (lower is better)
Translates to: TGLLAHAPMLMTSKAPLQLDTVC*FLSLQP
Trigger: TGGTTGTAAGGAAAGAAACAAGCAGACGGTATCCAG...CTGGAGGGGTGCCTTCGATGTCATTAACATTGGAGCATGGGCTAGCAGGCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp AGGCTGCTTCCACTCATGGCAGATGATGAAGGGAGAGCCAGTGTATGCAGACATTTGGGTCCCCTCCCTTaGTATGGGAGCTCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: RLLPLMADDEGRASVCRHLGPLP*YGSSVF
Trigger: GAAAACAGAGCTCCCATACAAAGGGAGGGGACCCAA...ATGTCTGCATACACTGGCTCTCCCTTCATCATCTGCCATGAGTGGAAGCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp CATCTGCTTCTGCTAAGGGTCTCAGGCTGCTTCCACTCATGGCAGATGATGAAGATAGCCAATCATCTATaGCCTGAGAGCACAGCGGGA +
Preference number: 5 (lower is better)
Translates to: HLLLLRVSGCFHSWQMMKIANHL*PESTAG
Trigger: TCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTAT...CTTCATCATCTGCCATGAGTGGAAGCAGCCTGAGACCCTTAGCAGAAGCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGCAACGACTACCCTCTTaGGGTCCCCTCCCTTTGTAT +
Preference number: 5 (lower is better)
Translates to: GKEIANHLLPESTAGGTMQRLPS*GPLPLY
Trigger: ATACAAAGGGAGGGGACCCAAAGAGGGTAGTCGTTG...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATTCGGGCTTCTCCCCCTaGACTTTAGGTGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNSGFSP*TLGVQQ
Trigger: CTGCTGCACACCTAAAGTCAAGGGGGAGAAGCCCGA...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CAA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGTCGGGCTTCTCCCCCTaGACTTTAGGTGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QCTIQRGMPVSGKLFHRESGFSP*TLGVQQ
Trigger: CTGCTGCACACCTAAAGTCAAGGGGGAGAAGCCCGA...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CAA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATCCTCCCCAACAGCACTaGGGTTTTCCTGTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNPPQQH*GFPVER
Trigger: CCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAGG...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp CCACCTTTAAACACGGGGCTTGCAACTCAGCTCACACCCGACCCATCAGGTAAGCATAAAGCTGAGAAATaGTTAGTTGACATTGTTGGG +
Preference number: 5 (lower is better)
Translates to: PPLNTGLATQLTPDPSGKHKAEK*LVDIVG
Trigger: CCCAACAATGTCAACTAACAATTTCTCAGCTTTATG...CTTACCTGATGGGTCGGGTGTGAGCTGAGTTGCAAGCCCCGTGTTTAAAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCATCGGGCTTCTCCCCCTaGACTTTAGGTGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKASGFSP*TLGVQQ
Trigger: CTGCTGCACACCTAAAGTCAAGGGGGAGAAGCCCGA...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CAA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATCAACGACTACCCTCTTaGGGTCCCCTCCCTTTGTAT +
Preference number: 5 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNQRLPS*GPLPLY
Trigger: ATACAAAGGGAGGGGACCCAAAGAGGGTAGTCGTTG...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCCCTCCCCAACAGCACTaGGGTTTTCCTGTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPPPQQH*GFPVER
Trigger: CCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAGG...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCTCGGGCTTCTCCCCCTaGACTTTAGGTGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSSGFSP*TLGVQQ
Trigger: CTGCTGCACACCTAAAGTCAAGGGGGAGAAGCCCGA...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CAA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATTTGCTCACCACAGGGTaGCCACAAACCTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNLLTTG*PQTFSL
Trigger: CAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAA...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CAA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGTTGCTCACCACAGGGTaGCCACAAACCTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: QCTIQRGMPVSGKLFHRELLTTG*PQTFSL
Trigger: CAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAA...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CAA 90 bp GGTAAAGAAATAGCCAATCATCTATTGCCTGAGAGCACAGCGGGAGGGACAATGACCTCCTTGTTAAGTTaGTCTTTTCCAGAATCGAAG +
Preference number: 5 (lower is better)
Translates to: GKEIANHLLPESTAGGTMTSLLS*SFPESK
Trigger: CTTCGATTCTGGAAAAGACAAACTTAACAAGGAGGT...CATTGTCCCTCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTATTTCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp TCGTCTTGCTCACCACAGGGTTGCCACAAACCTTCAGTTTGTATAAAACACAATCTGGATACCGTCTGCTaGTTTCTTTCCTTACAACCA +
Preference number: 5 (lower is better)
Translates to: SSCSPQGCHKPSVCIKHNLDTVC*FLSLQP
Trigger: TGGTTGTAAGGAAAGAAACAAGCAGACGGTATCCAG...ATTGTGTTTTATACAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAAGACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CAA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCTTGGGTCCCCTCCCTTaGTATGGGAGCTCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGLGPLP*YGSSVF
Trigger: GAAAACAGAGCTCCCATACAAAGGGAGGGGACCCAA...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCCAATTAGAGCAGTTGTaGGCCAACCTCCCCAACAGC +
Preference number: 5 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSQLEQL*ANLPNS
Trigger: GCTGTTGGGGAGGTTGGCCAACAACTGCTCTAATTG...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAACAATTAGAGCAGTTGTaGGCCAACCTCCCCAACAGC +
Preference number: 5 (lower is better)
Translates to: LWTQIPLYRICNKENNTKQLEQL*ANLPNS
Trigger: GCTGTTGGGGAGGTTGGCCAACAACTGCTCTAATTG...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGAGGTGCCAGGTTCTTTaGAACAACCAGCTCTCACAA +
Preference number: 5 (lower is better)
Translates to: QCTIQRGMPVSGKLFHRERCQVL*NNQLSQ
Trigger: TTGTGAGAGCTGGTTGTTCAAAAGAACCTGGCACCT...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp CAATGCACAATTCAGCGAGGTATGCCTGTATCTGGTAAATTATTTCATAGGGAGCTGGATACCGTCTGCTaGTTTCTTTCCTTACAACCA +
Preference number: 5 (lower is better)
Translates to: QCTIQRGMPVSGKLFHRELDTVC*FLSLQP
Trigger: TGGTTGTAAGGAAAGAAACAAGCAGACGGTATCCAG...CTCCCTATGAAATAATTTACCAGATACAGGCATACCTCGCTGAATTGTGCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CAA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTCTGGATACCGTCTGCTaGTTTCTTTCCTTACAACCA +
Preference number: 5 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCLDTVC*FLSLQP
Trigger: TGGTTGTAAGGAAAGAAACAAGCAGACGGTATCCAG...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp GTATCAACTAGGTTTACCATCTTTTATGGGCAGAATTTGTGGTATCCCAAAGCAGTCGTCCTCCACTCCTaGCATACAAAGAGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: VSTRFTIFYGQNLWYPKAVVLHS*HTKSFS
Trigger: TGAGAAACTCTTTGTATGCAAGGAGTGGAGGACGAC...TGCTTTGGGATACCACAAATTCTGCCCATAAAAGATGGTAAACCTAGTTGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CAA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCTTGCTCACCACAGGGTaGCCACAAACCTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSLLTTG*PQTFSL
Trigger: CAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAA...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CAA 90 bp CTCTGGACTCAAATTCCCTTGTACAGAATATGCAACAAAGAGAACAACACTAAACAATGCTCCTGTTCCTaGACTTTAGGTGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LWTQIPLYRICNKENNTKQCSCS*TLGVQQ
Trigger: CTGCTGCACACCTAAAGTCAAGGAACAGGAGCATTG...TTTAGTGTTGTTCTCTTTGTTGCATATTCTGTACAAGGGAATTTGAGTCCAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414720.6
ENST00000630440.2
CDS-3UTR CAA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTTTGGGTCCCCTCCCTTaGTATGGGAGCTCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: DSEICHTNSLQSILPQNVLGPLP*YGSSVF
Trigger: GAAAACAGAGCTCCCATACAAAGGGAGGGGACCCAA...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCATAGCCAATCATCTATaGCCTGAGAGCACAGCGGGA +
Preference number: 5 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGIANHL*PESTAG
Trigger: TCCCGCTGTGCTCTCAGGCAATAGATGATTGGCTAT...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAATTAGAGCAGTTGTaGGCCAACCTCCCCAACAGC +
Preference number: 5 (lower is better)
Translates to: MFSDSEICHTNSLQSILPQLEQL*ANLPNS
Trigger: GCTGTTGGGGAGGTTGGCCAACAACTGCTCTAATTG...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTTTGCTCACCACAGGGTaGCCACAAACCTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRILLTTG*PQTFSL
Trigger: CAAACTGAAGGTTTGTGGCAACCCTGTGGTGAGCAA...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CAA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCAGGTGCCAGGTTCTTTaGAACAACCAGCTCTCACAA +
Preference number: 5 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSRCQVL*NNQLSQ
Trigger: TTGTGAGAGCTGGTTGTTCAAAAGAACCTGGCACCT...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp TGCCACAAACCTTCAGTTTGTATAAAACACAATAACTGCAATGCACAATTCAGCCTGGATACCGTCTGCTaGTTTCTTTCCTTACAACCA +
Preference number: 5 (lower is better)
Translates to: CHKPSVCIKHNNCNAQFSLDTVC*FLSLQP
Trigger: TGGTTGTAAGGAAAGAAACAAGCAGACGGTATCCAG...GCTGAATTGTGCATTGCAGTTATTGTGTTTTATACAAACTGAAGGTTTGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS-3UTR CAA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCGCTGTAAAAGATGGTTaGGAAGCCAATGAAGAAATC +
Preference number: 5 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPAVKDG*EANEEI
Trigger: GATTTCTTCATTGGCTTCCAAACCATCTTTTACAGC...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp GGTTACCAGCTTACCCAAATGATCAAACTTAGTTTCACTAATGCAAGGACCTGTGCTGTAAAAGATGGTTaGGAAGCCAATGAAGAAATC +
Preference number: 5 (lower is better)
Translates to: GYQLTQMIKLSFTNARTCAVKDG*EANEEI
Trigger: GATTTCTTCATTGGCTTCCAAACCATCTTTTACAGC...ACAGGTCCTTGCATTAGTGAAACTAAGTTTGATCATTTGGGTAAGCTGGTAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp ATGCACTACAAATTAGATCTTTACAATGGACTTATGGCGGTTACCAGCTTACCCACCTCCTTGTTAAGTTaGTCTTTTCCAGAATCGAAG +
Preference number: 5 (lower is better)
Translates to: MHYKLDLYNGLMAVTSLPTSLLS*SFPESK
Trigger: CTTCGATTCTGGAAAAGACAAACTTAACAAGGAGGT...GGGTAAGCTGGTAACCGCCATAAGTCCATTGTAAAGATCTAATTTGTAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCTGGATACCGTCTGCTaGTTTCTTTCCTTACAACCA +
Preference number: 5 (lower is better)
Translates to: MFSDSEICHTNSLQSILPLDTVC*FLSLQP
Trigger: TGGTTGTAAGGAAAGAAACAAGCAGACGGTATCCAG...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTCTGGATACCGTCTGCTaGTTTCTTTCCTTACAACCA +
Preference number: 5 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRILDTVC*FLSLQP
Trigger: TGGTTGTAAGGAAAGAAACAAGCAGACGGTATCCAG...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340963.9
ENST00000450241.6
ENST00000455521.5
ENST00000595687.6
ENST00000626829.2
ENST00000628273.2
ENST00000629480.2
ENST00000630528.2
CDS TCA 90 bp GTATGGGAGCTCTGTTTTCACTCTATTAAATCTTGCAACAAAATTTaGGCGCCTACATTCATAGGATTTCCAGGCTACAATACACTAAAG +
Preference number: 5 (lower is better)
Translates to: VWELCFHSIKSCNKI*APTFIGFPGYNTLK
Trigger: CTTTAGTGTATTGTAGCCTGGAAATCCTATGAATGTAGGCGCTCAAATTTTGTTGCAAGATTTAATAGAGTGAAAACAGAGCTCCCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414720.6
ENST00000630440.2
CDS-3UTR CAA 90 bp AATACACTAAAGAGAGATAACCAAATGCAATGCAGATTCTGCAATGGATTCTCCACCTCCTTGTTAAGTTaGTCTTTTCCAGAATCGAAG +
Preference number: 5 (lower is better)
Translates to: NTLKRDNQMQCRFCNGFSTSLLS*SFPESK
Trigger: CTTCGATTCTGGAAAAGACAAACTTAACAAGGAGGT...GGAGAATCCATTGCAGAATCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCACCTCCTTGTTAAGTTaGTCTTTTCCAGAATCGAAG +
Preference number: 5 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGTSLLS*SFPESK
Trigger: CTTCGATTCTGGAAAAGACAAACTTAACAAGGAGGT...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp GACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCCAAAATGTTGCTGTAAAAGATGGTTaGGAAGCCAATGAAGAAATC +
Preference number: 5 (lower is better)
Translates to: DSEICHTNSLQSILPQNVAVKDG*EANEEI
Trigger: GATTTCTTCATTGGCTTCCAAACCATCTTTTACAGC...AACATTTTGGGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp ATGTTTTCTGACAGTGAAATATGCCATACAAATAGCCTACAAAGTATTCTTCCCGCTGTAAAAGATGGTTaGGAAGCCAATGAAGAAATC +
Preference number: 5 (lower is better)
Translates to: MFSDSEICHTNSLQSILPAVKDG*EANEEI
Trigger: GATTTCTTCATTGGCTTCCAAACCATCTTTTACAGC...GGGAAGAATACTTTGTAGGCTATTTGTATGGCATATTTCACTGTCAGAAAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000414720.6
ENST00000450241.6
ENST00000629480.2
ENST00000630440.2
CDS-3UTR CAA 90 bp GTGCTGATGATAAATGCTGAACAAAAACAAGGTTCCAGACAAAATAATCTTGGCCATAAAGCTGAGAAATaGTTAGTTGACATTGTTGGG +
Preference number: 5 (lower is better)
Translates to: VLMINAEQKQGSRQNNLGHKAEK*LVDIVG
Trigger: CCCAACAATGTCAACTAACAATTTCTCAGCTTTATG...GCCAAGATTATTTTGTCTGGAACCTTGTTTTTGTTCAGCATTTATCATCAGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp AATACACTAAAGAGAGATAACCAAATGCAATGCAGATTCTGCAATGGATTCTCCAGCAACATATCACTTTaGTACCATCATAAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: NTLKRDNQMQCRFCNGFSSNISL*YHHKAE
Trigger: CTCAGCTTTATGATGGTACAAAAGTGATATGTTGCT...GGAGAATCCATTGCAGAATCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2
CDS-3UTR CAA 90 bp GTGAACATGACAACTACCCTATATTCCTCATTCAAAGACTTTCTCACAAGAATTAGCAACATATCACTTTaGTACCATCATAAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: VNMTTTLYSSFKDFLTRISNISL*YHHKAE
Trigger: CTCAGCTTTATGATGGTACAAAAGTGATATGTTGCT...AATTCTTGTGAGAAAGTCTTTGAATGAGGAATATAGGGTAGTTGTCATGTTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450241.6
ENST00000629480.2