RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF778 (Homo sapiens)

Ensembl gene IDs: ENSG00000170100

Ensembl transcript IDs: ENST00000306502.6, ENST00000433976.7, ENST00000564906.5, ENST00000565414.1, ENST00000565877.5, ENST00000567651.5, ENST00000620195.4

Found 676 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCCGGATCGCAGCAGCTGCCCCAGGAGTGCCAGATTGCAGCAGCTaGCAGGACCGCTCTGCATGCTGTGAAGAGGATCTGGAGGTCAAC +
Preference number: 1 (lower is better)
Translates to: CRIAAAAPGVPDCSS*QDRSACCEEDLEVN
Trigger: GTTGACCTCCAGATCCTCTTCACAGCATGCAGAGCGGTCCTGGCAGCTGCTGCAATCTGGCACTCCTGGGGCAGCTGCTGCGATCCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 90 bp ATTGCAGCAGCTGCCAGGACCGCTCTGCATGCTGTGAAGAGGATCTaGAGGTCAACAAGGACACTCAGGGCTCTCACCCGTCCGGCACTG +
Preference number: 1 (lower is better)
Translates to: IAAAARTALHAVKRI*RSTRTLRALTRPAL
Trigger: CAGTGCCGGACGGGTGAGAGCCCTGAGTGTCCTTGTTGACCTCCAGATCCTCTTCACAGCATGCAGAGCGGTCCTGGCAGCTGCTGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 90 bp AGGAGTGCCAGATTGCAGCAGCTGCCAGGACCGCTCTGCATGCTGTaGAGAGGATCTGGAGGTCAACAAGGACACTCAGGGCTCTCACCC +
Preference number: 1 (lower is better)
Translates to: RSARLQQLPGPLCML*RGSGGQQGHSGLSP
Trigger: GGGTGAGAGCCCTGAGTGTCCTTGTTGACCTCCAGATCCTCTTCACAGCATGCAGAGCGGTCCTGGCAGCTGCTGCAATCTGGCACTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 90 bp CTCTGCCACTGTGTGTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTaGCAGGGCCAAGCGCCACAGAACATCAGGACCAGCCGTGTCCCT +
Preference number: 1 (lower is better)
Translates to: LCHCVCLRASSKKRQ*QGQAPQNIRTSRVP
Trigger: AGGGACACGGCTGGTCCTGATGTTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACACACACAGTGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 90 bp GCAGAGGCCACAGGGTTTTCACAGGAAAGGCAGGACAGGGCAGGATaGAGTCTGGGGCTGGCTAGTCTGCATACTTCCAGCAGGCCCAAG +
Preference number: 1 (lower is better)
Translates to: AEATGFSQERQDRAG*SLGLASLHTSSRPK
Trigger: CTTGGGCCTGCTGGAAGTATGCAGACTAGCCAGCCCCAGACTTCATCCTGCCCTGTCCTGCCTTTCCTGTGAAAACCCTGTGGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 90 bp TACCGCCTGCTCAGGATGCTGTCACTAGGAGTCCGAGCACCAGGATaGTGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCA +
Preference number: 1 (lower is better)
Translates to: YRLLRMLSLGVRAPG*CSPGVTCDPQVLDS
Trigger: TGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCATCATCCTGGTGCTCGGACTCCTAGTGACAGCATCCTGAGCAGGCGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 90 bp GCGCCACAGAACATCAGGACCAGCCGTGTCCCTGGTCTGTTTTCATaGTACACAAAGGAGCAGCACACACACAAGCAGCAGCTGCCCCAG +
Preference number: 1 (lower is better)
Translates to: APQNIRTSRVPGLFS*YTKEQHTHKQQLPQ
Trigger: CTGGGGCAGCTGCTGCTTGTGTGTGTGCTGCTCCTTTGTGTACCATGAAAACAGACCAGGGACACGGCTGGTCCTGATGTTCTGTGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 90 bp CCACAGGGTTTTCACAGGAAAGGCAGGACAGGGCAGGATGAAGTCTaGGGCTGGCTAGTCTGCATACTTCCAGCAGGCCCAAGGGCATAC +
Preference number: 1 (lower is better)
Translates to: PQGFHRKGRTGQDEV*GWLVCILPAGPRAY
Trigger: GTATGCCCTTGGGCCTGCTGGAAGTATGCAGACTAGCCAGCCCCAGACTTCATCCTGCCCTGTCCTGCCTTTCCTGTGAAAACCCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 90 bp AGGCCCAAGGGCATACAGCATGTCCTGCTGTCTAGTGCCTCATCCTaGGCTGACTTCAGGGAGGAGAAATACTGGCTTGGTGTGGTAGTT +
Preference number: 1 (lower is better)
Translates to: RPKGIQHVLLSSASS*ADFREEKYWLGVVV
Trigger: AACTACCACACCAAGCCAGTATTTCTCCTCCCTGAAGTCAGCCCAGGATGAGGCACTAGACAGCAGGACATGCTGTATGCCCTTGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 90 bp ACACCACTGGTGGGGCCTAGACGCGGACTCGTCAAGGTGAGTGAGTaGCACACACAGGTTCCTGACATGGAAAGTTTATCACTCACAGTG +
Preference number: 1 (lower is better)
Translates to: TPLVGPRRGLVKVSE*HTQVPDMESLSLTV
Trigger: CACTGTGAGTGATAAACTTTCCATGTCAGGAACCTGTGTGTGTCACTCACTCACCTTGACGAGTCCGCGTCTAGGCCCCACCAGTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 90 bp GGAAAACCACACCACTGGTGGGGCCTAGACGCGGACTCGTCAAGGTaGGTGAGTGACACACACAGGTTCCTGACATGGAAAGTTTATCAC +
Preference number: 1 (lower is better)
Translates to: GKPHHWWGLDADSSR*VSDTHRFLTWKVYH
Trigger: GTGATAAACTTTCCATGTCAGGAACCTGTGTGTGTCACTCACTCACCTTGACGAGTCCGCGTCTAGGCCCCACCAGTGGTGTGGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 90 bp GGTCGTGCTTTCCATGTTGATTCTGTCTTAAAGCCTACGCAGAACTaGTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGG +
Preference number: 1 (lower is better)
Translates to: GRAFHVDSVLKPTQN*SCLFSGEARPPTEW
Trigger: CCACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTAGGCTTTAAGACAGAATCAACATGGAAAGCACGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 90 bp CCCAGGATTGCTGCAGCCAGAGGACACACATTCGTGTCACTCACATaGAGTCTTGCTCTGCCACTGTGTGTGTTTAAGGGCCTCATCCAA +
Preference number: 1 (lower is better)
Translates to: PRIAAARGHTFVSLT*SLALPLCVFKGLIQ
Trigger: TTGGATGAGGCCCTTAAACACACACAGTGGCAGAGCAAGACTTCATGTGAGTGACACGAATGTGTGTCCTCTGGCTGCAGCAATCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 90 bp TGGGAGAGGAACAAGGGCATTTTCATAAAATGTAGAGCTGTGTTATaGCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATGCC +
Preference number: 1 (lower is better)
Translates to: WERNKGIFIKCRAVL*PNIGQCGTLQVGHA
Trigger: GGCATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCTACATTTTATGAAAATGCCCTTGTTCCTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 90 bp CAAGTTCTGGACTCAGGCAACTGTGAGTCAGTTCTAGCAGAGACCTaGAGGACTTATTTCAGCCAATCAGGATGTCACCTGAGACCAGTC +
Preference number: 1 (lower is better)
Translates to: QVLDSGNCESVLAET*RTYFSQSGCHLRPV
Trigger: GACTGGTCTCAGGTGACATCCTGATTGGCTGAAATAAGTCCTGCAGGTCTCTGCTAGAACTGACTCACAGTTGCCTGAGTCCAGAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 90 bp ATGCTCCCAGTAACTAGTGCATTCCCCTACAAACCAATCCAGGCTTaGCACAGCAAGAATGAATGGTATCCAACCATTCAGGAGGGTGCC +
Preference number: 1 (lower is better)
Translates to: MLPVTSAFPYKPIQA*HSKNEWYPTIQEGA
Trigger: GGCACCCTCCTGAATGGTTGGATACCATTCATTCTTGCTGTGTCAAGCCTGGATTGGTTTGTAGGGGAATGCACTAGTTACTGGGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 90 bp CTCTATGGCTTCCGACGAGAAACCCGGTCAATTGAATTGTTCTTCTaGAAGCACTGTGTCCACTTTCTCAGCCTCCTTCCAAGACTTTCA +
Preference number: 1 (lower is better)
Translates to: LYGFRRETRSIELFF*KHCVHFLSLLPRLS
Trigger: TGAAAGTCTTGGAAGGAGGCTGAGAAAGTGGACACAGTGCTTCCAGAAGAACAATTCAATTGACCGGGTTTCTCGTCGGAAGCCATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 90 bp GTTGAACGAGTAGAGAGAAAGAATAAAACTGCCCAGGAGTCAACATaGCAGTTCCTACAGATAGTTCAAGAATCCCTGGGCTGGGTAAGA +
Preference number: 1 (lower is better)
Translates to: VERVERKNKTAQEST*QFLQIVQESLGWVR
Trigger: TCTTACCCAGCCCAGGGATTCTTGAACTATCTGTAGGAACTGCCATGTTGACTCCTGGGCAGTTTTATTCTTTCTCTCTACTCGTTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 90 bp CAGACTGGAGGATTTCTACAGGGAACAGAGTCCTCACTCCAAGAATaGTCAGTGCAGCATCATAAAGATTCAAAATACGTCTACAGAACC +
Preference number: 1 (lower is better)
Translates to: QTGGFLQGTESSLQE*SVQHHKDSKYVYRT
Trigger: GGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTAGAAATCCTCCAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 90 bp ATGTCTCAAGTTAGCCCACAAGGTTTTAGAACACAGGGAAGCGACTaGTATCTTCCATACATTCACAACACTTCAAGTGTCAATCACCAC +
Preference number: 1 (lower is better)
Translates to: MSQVSPQGFRTQGSD*YLPYIHNTSSVNHH
Trigger: GTGGTGATTGACACTTGAAGTGTTGTGAATGTATGGAAGATAGCAGTCGCTTCCCTGTGTTCTAAAACCTTGTGGGCTAACTTGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 90 bp GAGGATTTCTACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTaGAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAA +
Preference number: 1 (lower is better)
Translates to: EDFYREQSPHSKNDQ*SIIKIQNTSTEPPE
Trigger: TTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTAGAAATCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 90 bp TTACTACATCACACTTTCTCCTTTTCTTCCAGGATACTGAGGTCATaGATGTTAGCCATTTGGTATCATAACACTGCTCCCCAAGGCTGT +
Preference number: 1 (lower is better)
Translates to: LLHHTFSFSSRILRS*MLAIWYHNTAPQGC
Trigger: ACAGCCTTGGGGAGCAGTGTTATGATACCAAATGGCTAACATTCATGACCTCAGTATCCTGGAAGAAAAGGAGAAAGTGTGATGTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 90 bp ATCTTTTTCCTTAAGGCATCATCACAAAAGTGGAAACAGGTGAAGTaGAAACCACTGCAATCTTCTAAGTCACAAGTGGTGACTCACCTC +
Preference number: 1 (lower is better)
Translates to: IFFLKASSQKWKQVK*KPLQSSKSQVVTHL
Trigger: GAGGTGAGTCACCACTTGTGACTTAGAAGATTGCAGTGGTTTCCACTTCACCTGTTTCCACTTTTGTGATGATGCCTTAAGGAAAAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 90 bp ACCACACCTGGCACAATCTTTTTCCTTAAGGCATCATCACAAAAGTaGAAACAGGTGAAGTGGAAACCACTGCAATCTTCTAAGTCACAA +
Preference number: 1 (lower is better)
Translates to: TTPGTIFFLKASSQK*KQVKWKPLQSSKSQ
Trigger: TTGTGACTTAGAAGATTGCAGTGGTTTCCACTTCACCTGTTTCCACTTTTGTGATGATGCCTTAAGGAAAAAGATTGTGCCAGGTGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 90 bp ATAACCCAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTaGTACATATCTGAGGCTGTGGGTAACTTAGAAAGAGGCTTATTT +
Preference number: 1 (lower is better)
Translates to: ITQFSIMLGVLVCLC*YISEAVGNLERGLF
Trigger: AAATAAGCCTCTTTCTAAGTTACCCACAGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTGGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAACGCCCCTCTCCACTCTaGCCCTCCTTGCACCCTGGT +
Preference number: 2 (lower is better)
Translates to: VFKGLIQEAPVTGPSATERPSPL*PSLHPG
Trigger: ACCAGGGTGCAAGGAGGGGCAGAGTGGAGAGGGGCG...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp ACGTGGGGATTCCTGACGGCATGCATTTCAACAGGTGTGGCGCAGCCCATGGAGCTTCTCCACACTGCGTaGGGTCACAGAGCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: TWGFLTACISTGVAQPMELLHTA*GHRAAL
Trigger: GAGGGCAGCTCTGTGACCGCACGCAGTGTGGAGAAG...CTCCATGGGCTGCGCCACACCTGTTGAAATGCATGCCGTCAGGAATCCCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR GCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCCACACAAGCAGCAGCTaGCCCAGGAGTGCCGGGTCG +
Preference number: 2 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRHTSSS*PRSAGS
Trigger: CGACCCGGCACTCCTGGGGCAGCTGCTGCTTGTGTG...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CAA 90 bp AGAGTGGTCAACCTCACAGGCCAGCTCCTAAGGCTGATGATGTGTTaGCTGCTGCAGGACTGCCTGGAGGCCAGGGCAAGCGAATGGGAA +
Preference number: 2 (lower is better)
Translates to: RVVNLTGQLLRLMMC*LLQDCLEARASEWE
Trigger: TTCCCATTCGCTTGCCCTGGCCTCCAGGCAGTCCTGCAGCAGCAAACACATCATCAGCCTTAGGAGCTGGCCTGTGAGGTTGACCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGTCCTGGCGTCACCTGTaGCCCACAAGTTCTGGACTC +
Preference number: 2 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVSWRHL*PTSSGL
Trigger: GAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGA...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGAGGTCTGTGCTGGGGTaGTGTCTCCACCAACAGTGG +
Preference number: 2 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVRSVLG*CLHQQW
Trigger: CCACTGTTGGTGGAGACATCACCCCAGCACAGACCT...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGTCCAGGGTGAGTTCCTaGCTGCCGGGTTGTGATGAG +
Preference number: 2 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVSRVSS*LPGCDE
Trigger: CTCATCACAACCCGGCAGGCAGGAACTCACCCTGGA...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGTCCAGGGTGAGTTCCTaGCTGCCGGGTTGTGATGAG +
Preference number: 2 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCESRVSS*LPGCDE
Trigger: CTCATCACAACCCGGCAGGCAGGAACTCACCCTGGA...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp ACGTGGGGATTCCTGACGGCATGCATTTCAACAGGTGTGGCGCAGCCCATGGAGAGCTGCCCTCCATTGTaGCTTCTTGCCGTCTGTGTC +
Preference number: 2 (lower is better)
Translates to: TWGFLTACISTGVAQPMESCPPL*LLAVCV
Trigger: GACACAGACGGCAAGAAGCCACAATGGAGGGCAGCT...CTCCATGGGCTGCGCCACACCTGTTGAAATGCATGCCGTCAGGAATCCCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR TCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTCATAGGGCTCCAGGGTaGGTTCCTGCCTGCCGGGTT +
Preference number: 2 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFHRAPG*VPACRV
Trigger: AACCCGGCAGGCAGGAACTCACCCTGGAGCCCTATG...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp CTTCTCGCCCGTGTGTGTTCGTACGTGTCTAGTAAGGCCACAGCGCACAGTGAAAACTGCTCTCCGCCCTaGCCTCAACTCCTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: LLARVCSYVSSKATAHSENCSPP*PQLLFL
Trigger: CAGGAAGAGGAGTTGAGGGCAGGGCGGAGAGCAGTT...TTCACTGTGCGCTGTGGCCTTACTAGACACGTACGAACACACACGGGCGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR CCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGGTGGGACCCTACAGGTaGGTCATGCCTAAGAGCATG +
Preference number: 2 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVVGPYR*VMPKSM
Trigger: CATGCTCTTAGGCATGACCCACCTGTAGGGTCCCAC...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAACAACATTGGCCAGTGTaGGACCCTACAGGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: VFKGLIQEAPVTGPSATEQHWPV*DPTGGS
Trigger: TGACCCACCTGTAGGGTCCCACACTGGCCAATGTTG...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGCAACATTGGCCAGTGTaGGACCCTACAGGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVQHWPV*DPTGGS
Trigger: TGACCCACCTGTAGGGTCCCACACTGGCCAATGTTG...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTAGGCAGGGTGGTGTCTaGGCTACCGCCTGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFRQGGV*ATACSG
Trigger: TCCTGAGCAGGCGGTAGCCCAGACACCACCCTGCCT...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGCACTCTGCCCCTCCTTaGACCCTGGTGTTTTATCTG +
Preference number: 2 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEHSAPP*TLVFYL
Trigger: CAGATAAAACACCAGGGTGCAAGGAGGGGCAGAGTG...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTCCAGATTGCAGCAGCTaGCAGGACCGCTCTGCATGC +
Preference number: 2 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFPDCSS*QDRSAC
Trigger: GCATGCAGAGCGGTCCTGGCAGCTGCTGCAATCTGG...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGGATGAGATGGAAAGCTaGAGCGGAGGAGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVDEMES*SGGEGT
Trigger: AGTGCCTTCTCCTCCGCTGCAGCTTTCCATCTCATC...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp CAACAGGTGTGGCGCAGCCCATGGAGTGAGTTAGAGCTTTCCCACACGGCTTCCTTAAGTCGCCATTCTTaGAGAACTGCTCTCCGCCCT +
Preference number: 2 (lower is better)
Translates to: QQVWRSPWSELELSHTASLSRHS*RTALRP
Trigger: AGGGCGGAGAGCAGTTCTCCAAGAATGGCGACTTAA...GGAAGCCGTGTGGGAAAGCTCTAACTCACTCCATGGGCTGCGCCACACCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR TCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCCCGCTCTGCATGCTGTaGAGAGGATCTGGAGGTCAA +
Preference number: 2 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRPLCML*RGSGGQ
Trigger: TTGACCTCCAGATCCTCTTCACAGCATGCAGAGCGG...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTAATCAGGATGTCACCTaGGACCAGTCCAGGAGCCGC +
Preference number: 2 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFNQDVT*DQSRSR
Trigger: GCGGCTCCTGGACTGGTCTCAGGTGACATCCTGATT...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp CAACAGGTGTGGCGCAGCCCATGGAGTGAGTTAGAGCTTTCCCACACGGCTTCCCTGTCTCCTGTATTTTaGGTTCTCACGTGTGTGCTG +
Preference number: 2 (lower is better)
Translates to: QQVWRSPWSELELSHTASLSPVF*VLTCVL
Trigger: CAGCACACACGTGAGAACTCAAAATACAGGAGACAG...GGAAGCCGTGTGGGAAAGCTCTAACTCACTCCATGGGCTGCGCCACACCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR GCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTAACCATTCAGGAGGGTaGCCCCATGACCCAAACCCC +
Preference number: 2 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFNHSGG*PHDPNP
Trigger: GGGGTTTGGGTCATGGGGGCACCCTCCTGAATGGTT...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp GGAACACTTCCCCACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTTGTGCGGTCACAGAGCTaGCCTCCATTGTGGCTTCTT +
Preference number: 2 (lower is better)
Translates to: GTLPHSCCSQEICPECMLVRSQS*PPLWLL
Trigger: AAGAAGCCACAATGGAGGGCAGCTCTGTGACCGCAC...AAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR CAA 90 bp TCCTACCAGATTTTCCTACAGGCAAGGGGTGCAGGGCTGTGGGTTTaGGTTGAGATTACACCAGGATCACGGGTTAGCGGACAGCAAGCT +
Preference number: 2 (lower is better)
Translates to: SYQIFLQARGAGLWV*VEITPGSRVSGQQA
Trigger: AGCTTGCTGTCCGCTAACCCGTGATCCTGGTGTAATCTCAACCAAAACCCACAGCCCTGCACCCCTTGCCTGTAGGAAAATCTGGTAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTCCGCTCTGCATGCTGTaGAGAGGATCTGGAGGTCAA +
Preference number: 2 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFPLCML*RGSGGQ
Trigger: TTGACCTCCAGATCCTCTTCACAGCATGCAGAGCGG...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCACTCGTCAAGGTGAGTaGGTGACACACACAGGTTCC +
Preference number: 2 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRTRQGE*VTHTGS
Trigger: GGAACCTGTGTGTGTCACTCACTCACCTTGACGAGT...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAATGTAGAGCTGTGTTATaGCCCAACATTGGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: VFKGLIQEAPVTGPSATECRAVL*PNIGQC
Trigger: ACACTGGCCAATGTTGGGGCATAACACAGCTCTACA...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGGGAACCCTCAGACATTaGGAGTGGAGATTTTCACAC +
Preference number: 2 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVGTLRH*EWRFSH
Trigger: GTGTGAAAATCTCCACTCCCAATGTCTGAGGGTTCC...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CAA 90 bp TTGCTGCAGCCAGAGGACACACATTCGTGTCACTCACATGAAGTCTaGCTCTGCCACTGTGTGTGTTTAAGGGCCTCATCCAAGAAGCGC +
Preference number: 2 (lower is better)
Translates to: LLQPEDTHSCHSHEV*LCHCVCLRASSKKR
Trigger: GCGCTTCTTGGATGAGGCCCTTAAACACACACAGTGGCAGAGCAAGACTTCATGTGAGTGACACGAATGTGTGTCCTCTGGCTGCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAAACACAGGGAAGCGACTaGTATCTTCCATACATTCAC +
Preference number: 2 (lower is better)
Translates to: VFKGLIQEAPVTGPSATETQGSD*YLPYIH
Trigger: GTGAATGTATGGAAGATAGCAGTCGCTTCCCTGTGT...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp CAATGCCAACAATTAAAGGTGGCAACAGATGAGCTAAATAGCCACACTCAATCCCACACAAGCAGCAGCTaGCCCAGGAGTGCCGGGTCG +
Preference number: 2 (lower is better)
Translates to: QCQQLKVATDELNSHTQSHTSSS*PRSAGS
Trigger: CGACCCGGCACTCCTGGGGCAGCTGCTGCTTGTGTG...GGATTGAGTGTGGCTATTTAGCTCATCTGTTGCCACCTTTAATTGTTGGCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGGTTCTAGCAGAGACCTaGAGGACTTATTTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEVLAET*RTYFSQ
Trigger: TTGGCTGAAATAAGTCCTGCAGGTCTCTGCTAGAAC...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTTGGTTCAGCAGGCTGTaGAAGCATAGCACTGGCATC +
Preference number: 2 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFWFSRL*KHSTGI
Trigger: GATGCCAGTGCTATGCTTGCACAGCCTGCTGAACCA...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGCAGTATGAGTTGAGTTaGGTTGCATATGCAGTGCGA +
Preference number: 2 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVQYELS*VAYAVR
Trigger: TCGCACTGCATATGCAACGCAACTCAACTCATACTG...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp GGAACACTTCCCCACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTTAACCAAGATCTATCCTaGCGAAGTGCTGGCCCTTTG +
Preference number: 2 (lower is better)
Translates to: GTLPHSCCSQEICPECMLNQDLS*RSAGPL
Trigger: CAAAGGGCCAGCACTTCGGCAGGATAGATCTTGGTT...AAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR GCA 90 bp ACGTGGGGATTCCTGACGGCATGCATTTCAACAGGTGTGGCGCAGCCCATGGAGCCCAACACGGAAAACTaGTCTCCAATTTTGAACAAG +
Preference number: 2 (lower is better)
Translates to: TWGFLTACISTGVAQPMEPNTEN*SPILNK
Trigger: CTTGTTCAAAATTGGAGAGCAGTTTTCCGTGTTGGG...CTCCATGGGCTGCGCCACACCTGTTGAAATGCATGCCGTCAGGAATCCCCACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR CCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAACAAGTCATGGACATCTaGAGAACGAGAGGTCTTTCA +
Preference number: 2 (lower is better)
Translates to: VFKGLIQEAPVTGPSATEQVMDI*RTRGLS
Trigger: TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTG...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGACATTCCTCAAGTCATaGACATCTGGAGAACGAGAG +
Preference number: 2 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVTFLKS*TSGERE
Trigger: CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTAGAAGAGGCTCTGTGTaGAGCCAAGTCAAGGGAGTA +
Preference number: 2 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFRRGSV*SQVKGV
Trigger: TACTCCCTTGACTTGGCTTCACACAGAGCCTCTTCT...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGAAGGTCAAGGGCAGTaGGCCAAACCCGAGGGACGG +
Preference number: 2 (lower is better)
Translates to: QFSIMLGVLVCLCCYISEEGQGQ*AKPEGR
Trigger: CCGTCCCTCGGGTTTGGCTCACTGCCCTTGACCTTC...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp CAATGCCAACAATTAAAGGTGGCAACAGATGAGCTAAATAGCCACACTCAATCCCCGGATCGCAGCAGCTaGCCCAGGAGTGCCAGATTG +
Preference number: 2 (lower is better)
Translates to: QCQQLKVATDELNSHTQSPDRSS*PRSARL
Trigger: CAATCTGGCACTCCTGGGGCAGCTGCTGCGATCCGG...GGATTGAGTGTGGCTATTTAGCTCATCTGTTGCCACCTTTAATTGTTGGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp TTCTGTCCAGGGTCTGTTTGGACGTGTTTAGAAAGACCTGAGAGTCCAGTGAAGCCATTCTTGGAGAACTaGTCTCCGCCCTGCCCTCAA +
Preference number: 2 (lower is better)
Translates to: FCPGSVWTCLERPESPVKPFLEN*SPPCPQ
Trigger: TTGAGGGCAGGGCGGAGAGCAGTTCTCCAAGAATGG...CTTCACTGGACTCTCAGGTCTTTCTAAACACGTCCAAACAGACCCTGGACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR CCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATCAAGTCATGGACATCTaGAGAACGAGAGGTCTTTCA +
Preference number: 2 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHQVMDI*RTRGLS
Trigger: TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTG...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp CTTCTCGCCCGTGTGTGTTCGTACGTGTCTAGTAAGGCCACAGCGCACAGTGAATGTCCAGGGTCTGTTTaGACGTGTTTAGAAAGACCT +
Preference number: 2 (lower is better)
Translates to: LLARVCSYVSSKATAHSECPGSV*TCLERP
Trigger: AGGTCTTTCTAAACACGTCCAAACAGACCCTGGACA...TTCACTGTGCGCTGTGGCCTTACTAGACACGTACGAACACACACGGGCGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR TCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGTATTTTATCTTACTCTaGGGAACCCTCAGACATTGG +
Preference number: 2 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVYFILL*GTLRHW
Trigger: CCAATGTCTGAGGGTTCCTCAGAGTAAGATAAAATA...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGCAGCAACAATGCTGCTaGATATCACACATCAATAGA +
Preference number: 2 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVQQQCC*ISHINR
Trigger: TCTATTGATGTGTGATATGCAGCAGCATTGTTGCTG...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTCCGGATCACAGCAGCTaGCTCATCAGTGCCGGATCG +
Preference number: 2 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAPDHSS*LISAGS
Trigger: CGATCCGGCACTGATGAGGCAGCTGCTGTGATCCGG...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp TTTCCCACACGGCTTCCATTTCCATGTTTCTTCTCCGTTGTGACTTCCCGCACGTCCCGAGTGCATGCTTaGTGGGAAACAACATTTGGA +
Preference number: 2 (lower is better)
Translates to: FPTRLPFPCFFSVVTSRTSRVHA*WETTFG
Trigger: TCCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGA...CGTGCGGGAAGTCACAACGGAGAAGAAACATGGAAATGGAAGCCGTGTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR CCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCACATTCCTCAAGTCATaGACATCTGGAGAACGAGAG +
Preference number: 2 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRTFLKS*TSGERE
Trigger: CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTCCTGGTCTGTTTTCATaGTACACAAAGGAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFPGLFS*YTKEQH
Trigger: GTGCTGCTCCTTTGTGTACCATGAAAACAGACCAGG...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp TTCTGTCCAGGGTCTGTTTGGACGTGTTTAGAAAGACCTGAGAGTCCAGTGAAGAAGGCTTTTCCACACTaGCCCAACACGGAAAACTGC +
Preference number: 2 (lower is better)
Translates to: FCPGSVWTCLERPESPVKKAFPH*PNTENC
Trigger: GCAGTTTTCCGTGTTGGGTCAGTGTGGAAAAGCCTT...CTTCACTGGACTCTCAGGTCTTTCTAAACACGTCCAAACAGACCCTGGACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR GCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTGCAGAACAGCAACAATaGTGCTGCATATCACACATC +
Preference number: 2 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFAEQQQ*CCISHI
Trigger: GATGTGTGATATGCAGCAGCATTGTTGCTGTTCTGC...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTCATGAAGTCTTGCTCTaGCACTGTGTGTGTTTAAGG +
Preference number: 2 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFHEVLL*HCVCLR
Trigger: CCTTAAACACACACAGTGGCAGAGCAAGACTTCATG...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGCCTACAGGCAAGGGGTaGAGGGCTGTGGGTTTTGGT +
Preference number: 2 (lower is better)
Translates to: QFSIMLGVLVCLCCYISEPTGKG*RAVGFG
Trigger: ACCAAAACCCACAGCCCTGCACCCCTTGCCTGTAGG...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGGATTTGTATATGCAGTaGATGTTTCCAGCAAGTTGT +
Preference number: 2 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVDLYMQ*MFPASC
Trigger: ACAACTTGCTGGAAACATGCACTGCATATACAAATC...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCACTGGGGAGACAGTaGCCTTCCCAGAGGCTGATA +
Preference number: 2 (lower is better)
Translates to: QFSIMLGVLVCLCCYISEALGRQ*PSQRLI
Trigger: TATCAGCCTCTGGGAAGGCCACTGTCTCCCCAGTGC...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp GGAACACTTCCCCACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTTCTGGGAAACAACATTTaGAGTAGAGCTGAAGGCTTT +
Preference number: 2 (lower is better)
Translates to: GTLPHSCCSQEICPECMLLGNNI*SRAEGF
Trigger: AAAGCCTTCAGCTCTACTCCAAATGTTGTTTCCCAG...AAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR TCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTGTGAATGAGTGTAGCTaGCAGCTTCCCCACATTCTT +
Preference number: 2 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCVNECS*QLPHIL
Trigger: AAGAATGTGGGGAAGCTGTCAGCTACACTCATTCAC...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAGTGAATGAGTGTAGCTaGCAGCTTCCCCACATTCTT +
Preference number: 2 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSVNECS*QLPHIL
Trigger: AAGAATGTGGGGAAGCTGTCAGCTACACTCATTCAC...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTCATAGCACTGGCATCTaGCCTGCTTCTGGTGAGGAC +
Preference number: 2 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAHSTGI*PASGED
Trigger: GTCCTCACCAGAAGCAGGTCAGATGCCAGTGCTATG...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTGGCTTTCTCTGTGTCTaGTGCATAGGGCTCCAGGGT +
Preference number: 2 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIGFLCV*CIGLQG
Trigger: ACCCTGGAGCCCTATGCAGCAGACACAGAGAAAGCC...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp TTCTGTCCAGGGTCTGTTTGGACGTGTTTAGAAAGACCTGAGAGTCCAGTGAAGTCTCATTTGATGCTCTaGACCAAGATCTATCCTGCC +
Preference number: 2 (lower is better)
Translates to: FCPGSVWTCLERPESPVKSHLML*TKIYPA
Trigger: GGCAGGATAGATCTTGGTTCAGAGCATCAAATGAGA...CTTCACTGGACTCTCAGGTCTTTCTAAACACGTCCAAACAGACCCTGGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR TCA 90 bp TTCTGTCCAGGGTCTGTTTGGACGTGTTTAGAAAGACCTGAGAGTCCAGTGAAGCGTCTGTGTCTCATTTaGTGCTCTGAACCAAGATCT +
Preference number: 2 (lower is better)
Translates to: FCPGSVWTCLERPESPVKRLCLI*CSEPRS
Trigger: AGATCTTGGTTCAGAGCATCAAATGAGACACAGACG...CTTCACTGGACTCTCAGGTCTTTCTAAACACGTCCAAACAGACCCTGGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR TCA 90 bp TTCTGTCCAGGGTCTGTTTGGACGTGTTTAGAAAGACCTGAGAGTCCAGTGAAGACGTGCCTGAAGGTATaGCTGATTAAGGAACACTTC +
Preference number: 2 (lower is better)
Translates to: FCPGSVWTCLERPESPVKTCLKV*LIKEHF
Trigger: GAAGTGTTCCTTAATCAGTCATACCTTCAGGCACGT...CTTCACTGGACTCTCAGGTCTTTCTAAACACGTCCAAACAGACCCTGGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR CCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTGCATCATCACAAAAGTaGAAACAGGTGAAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFASSQK*KQVKWK
Trigger: TTTCCACTTCACCTGTTTCCACTTTTGTGATGATGC...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTGACCTTAGAGAACACTaGGGGCTTTCTCTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIDLREH*GLSLCL
Trigger: CAGACACAGAGAAAGCCCTCAGTGTTCTCTAAGGTC...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTTTCGTGTCACTCACATaGAGTCTTGCTCTGCCACTG +
Preference number: 2 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAFVSLT*SLALPL
Trigger: CAGTGGCAGAGCAAGACTTCATGTGAGTGACACGAA...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTGCTGTGGGTTTTGGTTaGGATTACACCAGGATCACG +
Preference number: 2 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAAVGFG*DYTRIT
Trigger: CGTGATCCTGGTGTAATCTCAACCAAAACCCACAGC...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTGAGTTGATTTGTATATaGAGTGCATGTTTCCAGCAA +
Preference number: 2 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFELICI*SACFQQ
Trigger: TTGCTGGAAACATGCACTGCATATACAAATCAACTC...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTGTGACCCACAAGTTCTaGACTCAGGCAACTGTGAGT +
Preference number: 2 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAVTHKF*TQATVS
Trigger: ACTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCAC...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR GCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGATAACCCAGGATTGCTaGAGCCAGAGGACACACATT +
Preference number: 2 (lower is better)
Translates to: QFSIMLGVLVCLCCYISEITQDC*SQRTHI
Trigger: AATGTGTGTCCTCTGGCTGCAGCAATCCTGGGTTAT...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGCCTGGTCTGTTTTCATaGTACACAAAGGAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: QFSIMLGVLVCLCCYISEPGLFS*YTKEQH
Trigger: GTGCTGCTCCTTTGTGTACCATGAAAACAGACCAGG...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR TCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTTTCATGTCTTCAACGTaGATGAGTGTAGCTGACAGC +
Preference number: 2 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAFMSST*MSVADS
Trigger: GCTGTCAGCTACACTCATTCACGTTGAAGACATGAA...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTAGAAAGAGGCTTATTTaGCTCATGGTTCAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: FSIMLGVLVCLCCYISEARKRLI*LMVQQA
Trigger: AGCCTGCTGAACCATGAGCCAAATAAGCCTCTTTCT...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 72 bp CTGCATGCTCTGCCTCCCGGGTTCACGCCATTCTCCTaGCTCAGCCTCCCCAGTAGCTGGGACTGCAGTCGC +
Preference number: 3 (lower is better)
Translates to: LHALPPGFTPFS*LSLPSSWDCSR
Trigger: GCGACTGCAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCATGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 72 bp GCAGCAGCTGCCCCAGGAGTGCCAGATTGCAGCAGCTaGCAGGACCGCTCTGCATGCTGTGAAGAGGATCTG +
Preference number: 3 (lower is better)
Translates to: AAAAPGVPDCSS*QDRSACCEEDL
Trigger: CAGATCCTCTTCACAGCATGCAGAGCGGTCCTGGCAGCTGCTGCAATCTGGCACTCCTGGGGCAGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 72 bp CAACAAGGACACTCAGGGCTCTCACCCGTCCGGCACTaGCTAAGGTACAGGAATTCCCTCCTCCCCACGTGG +
Preference number: 3 (lower is better)
Translates to: QQGHSGLSPVRH*LRYRNSLLPTW
Trigger: CCACGTGGGGAGGAGGGAATTCCTGTACCTTAGGCAGTGCCGGACGGGTGAGAGCCCTGAGTGTCCTTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 72 bp GCTGCCAGGACCGCTCTGCATGCTGTGAAGAGGATCTaGAGGTCAACAAGGACACTCAGGGCTCTCACCCGT +
Preference number: 3 (lower is better)
Translates to: AARTALHAVKRI*RSTRTLRALTR
Trigger: ACGGGTGAGAGCCCTGAGTGTCCTTGTTGACCTCCAGATCCTCTTCACAGCATGCAGAGCGGTCCTGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 72 bp TCCATGGGCATCGCTGCTGAGGAGGTTCTGAAGAAGTaGGTGAAGTCACCTCCAGTGAAGGGAGGGGGAGTC +
Preference number: 3 (lower is better)
Translates to: SMGIAAEEVLKK*VKSPPVKGGGV
Trigger: GACTCCCCCTCCCTTCACTGGAGGTGACTTCACGCACTTCTTCAGAACCTCCTCAGCAGCGATGCCCATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 72 bp AGGACAGGGCAGGATGAAGTCTGGGGCTGGCTAGTCTaGATACTTCCAGCAGGCCCAAGGGCATACAGCATG +
Preference number: 3 (lower is better)
Translates to: RTGQDEVWGWLV*ILPAGPRAYSM
Trigger: CATGCTGTATGCCCTTGGGCCTGCTGGAAGTATGCAGACTAGCCAGCCCCAGACTTCATCCTGCCCTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp TGTGTGTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTaGCAGGGCCAAGCGCCACAGAACATCAGGACCAGC +
Preference number: 3 (lower is better)
Translates to: CVCLRASSKKRQ*QGQAPQNIRTS
Trigger: GCTGGTCCTGATGTTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp CTCAGGATGCTGTCACTAGGAGTCCGAGCACCAGGATaGTGCAGTCCTGGCGTCACCTGTGACCCACAAGTT +
Preference number: 3 (lower is better)
Translates to: LRMLSLGVRAPG*CSPGVTCDPQV
Trigger: AACTTGTGGGTCACAGGTGACGCCAGGACTGCATCATCCTGGTGCTCGGACTCCTAGTGACAGCATCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp TGTGCCTTAGGAACCCCAGTCCATGGGCATCGCTGCTaGGGAGGTTCTGAAGAAGTGCGTGAAGTCACCTCC +
Preference number: 3 (lower is better)
Translates to: CALGTPVHGHRC*GGSEEVREVTS
Trigger: GGAGGTGACTTCACGCACTTCTTCAGAACCTCCTCAGCAGCGATGCCCATGGACTGGGGTTCCTAAGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp CACCACTGGTGGGGCCTAGACGCGGACTCGTCAAGGTaGGTGAGTGACACACACAGGTTCCTGACATGGAAA +
Preference number: 3 (lower is better)
Translates to: HHWWGLDADSSR*VSDTHRFLTWK
Trigger: TTTCCATGTCAGGAACCTGTGTGTGTCACTCACTCACCTTGACGAGTCCGCGTCTAGGCCCCACCAGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp CCTGCAGGACTTATTTCAGCCAATCAGGATGTCACCTaGGACCAGTCCAGGAGCCGCTACAACCCCACAAGC +
Preference number: 3 (lower is better)
Translates to: PAGLISANQDVT*DQSRSRYNPTS
Trigger: GCTTGTGGGGTTGTAGCGGCTCCTGGACTGGTCTCAGGTGACATCCTGATTGGCTGAAATAAGTCCTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp TGCTGTGTCAAACAGGGCAGAGAAGGTCAAGGGCAGTaGGCCAAACCCGAGGGACGGCTTGGCTTTATCACA +
Preference number: 3 (lower is better)
Translates to: CCVKQGREGQGQ*AKPEGRLGFIT
Trigger: TGTGATAAAGCCAAGCCGTCCCTCGGGTTTGGCTCACTGCCCTTGACCTTCTCTGCCCTGTTTGACACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 72 bp AAGACCTTAGAGAACACTGAGGGCTTTCTCTGTGTCTaGTGCATAGGGCTCCAGGGTGAGTTCCTGCCTGCC +
Preference number: 3 (lower is better)
Translates to: KTLENTEGFLCV*CIGLQGEFLPA
Trigger: GGCAGGCAGGAACTCACCCTGGAGCCCTATGCAGCAGACACAGAGAAAGCCCTCAGTGTTCTCTAAGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CAA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCTGTTATGCCCCAACATaGGCCAGTGTGGGACCCTAC +
Preference number: 3 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRCYAPT*ASVGPY
Trigger: GTAGGGTCCCACACTGGCCAATGTTGGGGCATAACA...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CAA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGCACTCACATGAAGTCTaGCTCTGCCACTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVHSHEV*LCHCVC
Trigger: ACACACACAGTGGCAGAGCAAGACTTCATGTGAGTG...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CAA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGTCTGGTGAGGACTATTaGCTGTGTCAAACAGGGCAG +
Preference number: 3 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVSGEDY*LCQTGQ
Trigger: CTGCCCTGTTTGACACAGCAAATAGTCCTCACCAGA...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CAA 90 bp TTTCCCACACGGCTTCCATTTCCATGTTTCTTCTCCGTTGTGACTTCCCGCACGCAGAGCTGCCCTCCATaGTGGCTTCTTGCCGTCTGT +
Preference number: 3 (lower is better)
Translates to: FPTRLPFPCFFSVVTSRTQSCPP*WLLAVC
Trigger: ACAGACGGCAAGAAGCCACAATGGAGGGCAGCTCTG...CGTGCGGGAAGTCACAACGGAGAAGAAACATGGAAATGGAAGCCGTGTGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR GCA 72 bp GCACTGGCATCTGACCTGCTTCTGGTGAGGACTATTTaGTGTGTCAAACAGGGCAGAGAAGGTCAAGGGCAG +
Preference number: 3 (lower is better)
Translates to: ALASDLLLVRTI*CVKQGREGQGQ
Trigger: CTGCCCTTGACCTTCTCTGCCCTGTTTGACACAGCAAATAGTCCTCACCAGAAGCAGGTCAGATGCCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 72 bp TATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTaGGTCATGCCTAAGAGCATGACTAACCAACCAGAG +
Preference number: 3 (lower is better)
Translates to: YAPTLASVGPYR*VMPKSMTNQPE
Trigger: CTCTGGTTGGTTAGTCATGCTCTTAGGCATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 72 bp GGCATACAGCATGTCCTGCTGTCTAGTGCCTCATCCTaGGCTGACTTCAGGGAGGAGAAATACTGGCTTGGT +
Preference number: 3 (lower is better)
Translates to: GIQHVLLSSASS*ADFREEKYWLG
Trigger: ACCAAGCCAGTATTTCTCCTCCCTGAAGTCAGCCCAGGATGAGGCACTAGACAGCAGGACATGCTGTATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CAA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTAGGCTGATGATGTGTTaGCTGCTGCAGGACTGCCTG +
Preference number: 3 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFRLMMC*LLQDCL
Trigger: CAGGCAGTCCTGCAGCAGCAAACACATCATCAGCCT...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CAA 90 bp GGAACACTTCCCCACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTTTTTAAGTCGCCATTCTaGGAGAACTGCTCTCCGCCC +
Preference number: 3 (lower is better)
Translates to: GTLPHSCCSQEICPECMLFKSPF*ENCSPP
Trigger: GGGCGGAGAGCAGTTCTCCAAGAATGGCGACTTAAA...AAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR TCA 72 bp TCCACTCTGCCCCTCCTTGCACCCTGGTGTTTTATCTaGAGGGATCAGGTATGGGAGAGGAACAAGGGCATT +
Preference number: 3 (lower is better)
Translates to: STLPLLAPWCFI*RDQVWERNKGI
Trigger: AATGCCCTTGTTCCTCTCCCATACCTGATCCCTTCAGATAAAACACCAGGGTGCAAGGAGGGGCAGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp GCTGCAGCCAGAGGACACACATTCGTGTCACTCACATaGAGTCTTGCTCTGCCACTGTGTGTGTTTAAGGGC +
Preference number: 3 (lower is better)
Translates to: AAARGHTFVSLT*SLALPLCVFKG
Trigger: GCCCTTAAACACACACAGTGGCAGAGCAAGACTTCATGTGAGTGACACGAATGTGTGTCCTCTGGCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp GTGGGGCCTAGACGCGGACTCGTCAAGGTGAGTGAGTaGCACACACAGGTTCCTGACATGGAAAGTTTATCA +
Preference number: 3 (lower is better)
Translates to: VGPRRGLVKVSE*HTQVPDMESLS
Trigger: TGATAAACTTTCCATGTCAGGAACCTGTGTGTGTCACTCACTCACCTTGACGAGTCCGCGTCTAGGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp AGCTTTTCCAGTCCTTCTGGAATGGTATTTTGCCACTaGAATGGAGCACGGAACCTCCACGCCGTCCAGCCA +
Preference number: 3 (lower is better)
Translates to: SFSSPSGMVFCH*NGARNLHAVQP
Trigger: TGGCTGGACGGCGTGGAGGTTCCGTGCTCCATTTCAGTGGCAAAATACCATTCCAGAAGGACTGGAAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 72 bp AATGGAGCACGGAACCTCCACGCCGTCCAGCCACGTTaGCCCTCACCTTCATGTTGTAGTTGTCTTATGTAT +
Preference number: 3 (lower is better)
Translates to: NGARNLHAVQPR*PSPSCCSCLMY
Trigger: ATACATAAGACAACTACAACATGAAGGTGAGGGGCAACGTGGCTGGACGGCGTGGAGGTTCCGTGCTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 72 bp AACATCAGGACCAGCCGTGTCCCTGGTCTGTTTTCATaGTACACAAAGGAGCAGCACACACACAAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: NIRTSRVPGLFS*YTKEQHTHKQQ
Trigger: CTGCTGCTTGTGTGTGTGCTGCTCCTTTGTGTACCATGAAAACAGACCAGGGACACGGCTGGTCCTGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 72 bp GCCTCATCCTGGGCTGACTTCAGGGAGGAGAAATACTaGCTTGGTGTGGTAGTTAGAAAAAGGAAGTGGCCG +
Preference number: 3 (lower is better)
Translates to: ASSWADFREEKY*LGVVVRKRKWP
Trigger: CGGCCACTTCCTTTTTCTAACTACCACACCAAGCCAGTATTTCTCCTCCCTGAAGTCAGCCCAGGATGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CAA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTTGGCGTTTCACCATGTaGGCCAGGATGGTCTTGATC +
Preference number: 3 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFWRFTM*ARMVLI
Trigger: GATCAAGACCATCCTGGCCAACATGGTGAAACGCCA...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CAA 90 bp TTCTGTCCAGGGTCTGTTTGGACGTGTTTAGAAAGACCTGAGAGTCCAGTGAAGTTCCCCAGGGTGGACTaGCACGCGACCAGTAAGGTA +
Preference number: 3 (lower is better)
Translates to: FCPGSVWTCLERPESPVKFPRVD*HATSKV
Trigger: TACCTTACTGGTCGCGTGCAAGTCCACCCTGGGGAA...CTTCACTGGACTCTCAGGTCTTTCTAAACACGTCCAAACAGACCCTGGACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR TCA 72 bp TGGTTCAGCAGGCTGTGCAAGCATAGCACTGGCATCTaGCCTGCTTCTGGTGAGGACTATTTGCTGTGTCAA +
Preference number: 3 (lower is better)
Translates to: WFSRLCKHSTGI*PASGEDYLLCQ
Trigger: TTGACACAGCAAATAGTCCTCACCAGAAGCAGGTCAGATGCCAGTGCTATGCTTGCACAGCCTGCTGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp TGTGGCTTCTTGCCGTCTGTGTCTCATTTGATGCTCTaGACCAAGATCTATCCTGCCGAAGTGCTGGCCCTT +
Preference number: 3 (lower is better)
Translates to: CGFLPSVSHLML*TKIYPAEVLAL
Trigger: AAGGGCCAGCACTTCGGCAGGATAGATCTTGGTTCAGAGCATCAAATGAGACACAGACGGCAAGAAGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR TCA 72 bp CCCTCCATTGTGGCTTCTTGCCGTCTGTGTCTCATTTaGTGCTCTGAACCAAGATCTATCCTGCCGAAGTGC +
Preference number: 3 (lower is better)
Translates to: PSIVASCRLCLI*CSEPRSILPKC
Trigger: GCACTTCGGCAGGATAGATCTTGGTTCAGAGCATCAAATGAGACACAGACGGCAAGAAGCCACAATGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR GCA 72 bp TTCCATGTTGATTCTGTCTTAAAGCCTACGCAGAACTaGTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCT +
Preference number: 3 (lower is better)
Translates to: FHVDSVLKPTQN*SCLFSGEARPP
Trigger: AGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTAGGCTTTAAGACAGAATCAACATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CAA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTAGGAACCCTCAGACATaGGGAGTGGAGATTTTCACA +
Preference number: 3 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFRNPQT*GVEIFT
Trigger: TGTGAAAATCTCCACTCCCAATGTCTGAGGGTTCCT...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 72 bp GACTCAGGCAACTGTGAGTCAGTTCTAGCAGAGACCTaGAGGACTTATTTCAGCCAATCAGGATGTCACCTG +
Preference number: 3 (lower is better)
Translates to: DSGNCESVLAET*RTYFSQSGCHL
Trigger: CAGGTGACATCCTGATTGGCTGAAATAAGTCCTGCAGGTCTCTGCTAGAACTGACTCACAGTTGCCTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 72 bp GCTGTGGGTAACTTAGAAAGAGGCTTATTTGGCTCATaGTTCAGCAGGCTGTGCAAGCATAGCACTGGCATC +
Preference number: 3 (lower is better)
Translates to: AVGNLERGLFGS*FSRLCKHSTGI
Trigger: GATGCCAGTGCTATGCTTGCACAGCCTGCTGAACCATGAGCCAAATAAGCCTCTTTCTAAGTTACCCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CAA 90 bp TGGCTTCTTGCCGTCTGTGTCTCATTTGATGCTCTGAACCAAGATCTATCCTGCCGAAGTGCTGGCCCTTaGGTTTTAAGTCGCCATTCT +
Preference number: 3 (lower is better)
Translates to: WLLAVCVSFDALNQDLSCRSAGP*VLSRHS
Trigger: AGAATGGCGACTTAAAACCAAAGGGCCAGCACTTCG...GCAGGATAGATCTTGGTTCAGAGCATCAAATGAGACACAGACGGCAAGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR CAA 90 bp TTTCCCACACGGCTTCCATTTCCATGTTTCTTCTCCGTTGTGACTTCCCGCACGACTGTCTCCTGTATTTaGAGTTCTCACGTGTGTGCT +
Preference number: 3 (lower is better)
Translates to: FPTRLPFPCFFSVVTSRTTVSCI*SSHVCA
Trigger: AGCACACACGTGAGAACTCAAAATACAGGAGACAGT...CGTGCGGGAAGTCACAACGGAGAAGAAACATGGAAATGGAAGCCGTGTGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR-3UTR CAA 90 bp CTTCTCGCCCGTGTGTGTTCGTACGTGTCTAGTAAGGCCACAGCGCACAGTGAAAACTGCTCTCCAATTTaGAACAAGGTTTTCTGGCAT +
Preference number: 3 (lower is better)
Translates to: LLARVCSYVSSKATAHSENCSPI*NKVFWH
Trigger: ATGCCAGAAAACCTTGTTCAAAATTGGAGAGCAGTT...TTCACTGTGCGCTGTGGCCTTACTAGACACGTACGAACACACACGGGCGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR GCA 72 bp ACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATaGTTGCTGGGAAACAACATTTGGAGTAGAGCTGAA +
Preference number: 3 (lower is better)
Translates to: TAAVVKRSVPSA*LLGNNIWSRAE
Trigger: TTCAGCTCTACTCCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
3UTR CCA 72 bp TTCCGACGAGAAACCCGGTCAATTGAATTGTTCTTCTaGAAGCACTGTGTCCACTTTCTCAGCCTCCTTCCA +
Preference number: 3 (lower is better)
Translates to: FRRETRSIELFF*KHCVHFLSLLP
Trigger: TGGAAGGAGGCTGAGAAAGTGGACACAGTGCTTCCAGAAGAACAATTCAATTGACCGGGTTTCTCGTCGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CAA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTCACTCACATGAAGTCTaGCTCTGCCACTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAHSHEV*LCHCVC
Trigger: ACACACACAGTGGCAGAGCAAGACTTCATGTGAGTG...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR-3UTR CAA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTCATGTTTCCAGCAAGTaGTTTACCATCTTTAGGAAT +
Preference number: 3 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFHVSSK*FTIFRN
Trigger: ATTCCTAAAGATGGTAAACAACTTGCTGGAAACATG...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 72 bp GTAGAGAGAAAGAATAAAACTGCCCAGGAGTCAACATaGCAGTTCCTACAGATAGTTCAAGAATCCCTGGGC +
Preference number: 3 (lower is better)
Translates to: VERKNKTAQEST*QFLQIVQESLG
Trigger: GCCCAGGGATTCTTGAACTATCTGTAGGAACTGCCATGTTGACTCCTGGGCAGTTTTATTCTTTCTCTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp GTAACTAGTGCATTCCCCTACAAACCAATCCAGGCTTaGCACAGCAAGAATGAATGGTATCCAACCATTCAG +
Preference number: 3 (lower is better)
Translates to: VTSAFPYKPIQA*HSKNEWYPTIQ
Trigger: CTGAATGGTTGGATACCATTCATTCTTGCTGTGTCAAGCCTGGATTGGTTTGTAGGGGAATGCACTAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 72 bp GTTAGCCCACAAGGTTTTAGAACACAGGGAAGCGACTaGTATCTTCCATACATTCACAACACTTCAAGTGTC +
Preference number: 3 (lower is better)
Translates to: VSPQGFRTQGSD*YLPYIHNTSSV
Trigger: GACACTTGAAGTGTTGTGAATGTATGGAAGATAGCAGTCGCTTCCCTGTGTTCTAAAACCTTGTGGGCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 72 bp ATTTCAGAACTTGAAAAATGCTCCTACATTTCCTGTTaGCCTCTATGGCTTCCGACGAGAAACCCGGTCAAT +
Preference number: 3 (lower is better)
Translates to: ISELEKCSYISC*PLWLPTRNPVN
Trigger: ATTGACCGGGTTTCTCGTCGGAAGCCATAGAGGCCAACAGGAAATGTAGGAGCATTTTTCAAGTTCTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp CACACTTTCTCCTTTTCTTCCAGGATACTGAGGTCATaGATGTTAGCCATTTGGTATCATAACACTGCTCCC +
Preference number: 3 (lower is better)
Translates to: HTFSFSSRILRS*MLAIWYHNTAP
Trigger: GGGAGCAGTGTTATGATACCAAATGGCTAACATTCATGACCTCAGTATCCTGGAAGAAAAGGAGAAAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 72 bp AAATATACAGACTTAGCTTTTCCAGTCCTTCTGGAATaGTATTTTGCCACTGAAATGGAGCACGGAACCTCC +
Preference number: 3 (lower is better)
Translates to: KYTDLAFPVLLE*YFATEMEHGTS
Trigger: GGAGGTTCCGTGCTCCATTTCAGTGGCAAAATACCATTCCAGAAGGACTGGAAAAGCTAAGTCTGTATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp GGATTTCTACAGGGAACAGAGTCCTCACTCCAAGAATaGTCAGTGCAGCATCATAAAGATTCAAAATACGTC +
Preference number: 3 (lower is better)
Translates to: GFLQGTESSLQE*SVQHHKDSKYV
Trigger: GACGTATTTTGAATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTAGAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 72 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTaGTACATATCTGAGGCTGTGGGTAACTTAGAAAGA +
Preference number: 3 (lower is better)
Translates to: FSIMLGVLVCLC*YISEAVGNLER
Trigger: TCTTTCTAAGTTACCCACAGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp TTTTCCTTAAGGCATCATCACAAAAGTGGAAACAGGTaGAGTGGAAACCACTGCAATCTTCTAAGTCACAAG +
Preference number: 3 (lower is better)
Translates to: FSLRHHHKSGNR*SGNHCNLLSHK
Trigger: CTTGTGACTTAGAAGATTGCAGTGGTTTCCACTTCACCTGTTTCCACTTTTGTGATGATGCCTTAAGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR GCA 72 bp CAAAACCATGTTCATACTATCAGTAATGAAGAGAAGTaGAAACCAACACCCCAAGGAGATGCTGTTTCACAA +
Preference number: 3 (lower is better)
Translates to: QNHVHTISNEEK*KPTPQGDAVSQ
Trigger: TTGTGAAACAGCATCTCCTTGGGGTGTTGGTTTGCACTTCTCTTCATTACTGATAGTATGAACATGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp CCTCCTGGTGAAACAAAACATTTTGGTATCAATTATTaGGACTTCACAGACACTACTAACTCCTACCAGATT +
Preference number: 3 (lower is better)
Translates to: PPGETKHFGINY*DFTDTTNSYQI
Trigger: AATCTGGTAGGAGTTAGTAGTGTCTGTGAAGTCTCAATAATTGATACCAAAATGTTTTGTTTCACCAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR TCA 72 bp CATCACAGCATATGGTATTACTCAAGAAAATCACTTTaGAATGTTGGGGGTCCAATGATAATATCCTTGAGG +
Preference number: 3 (lower is better)
Translates to: HHSIWYYSRKSL*NVGGPMIISLR
Trigger: CCTCAAGGATATTATCATTGGACCCCCAACATTTCAAAGTGATTTTCTTGAGTAATACCATATGCTGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CCA 72 bp ACTCTACAGATACGGTCAACAAAAATCAACTCCAAATaGATTAAGCAACTTGGGATAAAACATAGAAACTGT +
Preference number: 3 (lower is better)
Translates to: TLQIRSTKINSK*IKQLGIKHRNC
Trigger: ACAGTTTCTATGTTTTATCCCAAGTTGCTTAATCCATTTGGAGTTGATTTTTGTTGACCGTATCTGTAGAGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAAGGGCCCAAGGGGAGCTaGAGAGCTGGGCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATEGPKGS*RAGQEA
Trigger: TGCCTCCTGCCCAGCTCTGCAGCTCCCCTTGGGCCC...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGCCCAGTAGCTGGGACTaGAGTCGCCCGCCACCACGC +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEPSSWD*SRPPPR
Trigger: GCGTGGTGGCGGGCGACTGCAGTCCCAGCTACTGGG...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp ACGTGGGGATTCCTGACGGCATGCATTTCAACAGGTGTGGCGCAGCCCATGGAGGCCATCCTGGGAGGCTaGCGGAAGCGTCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: TWGFLTACISTGVAQPMEAILGG*RKRLNA
Trigger: AGCATTCAGACGCTTCCGTCAGCCTCCCAGGATGGC...CTCCATGGGCTGCGCCACACCTGTTGAAATGCATGCCGTCAGGAATCCCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGCATAGGGCTCCAGGGTaGGTTCCTGCCTGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVHRAPG*VPACRV
Trigger: AACCCGGCAGGCAGGAACTCACCCTGGAGCCCTATG...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGGCAGCAGCTGCCCCATaGATGCCGGATCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVAAAAP*MPDHSS
Trigger: GCTGCTGTGATCCGGCATTCATGGGGCAGCTGCTGC...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATCACACAAGCAGCAGCTaGCCCAGGAGTGCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHHTSSS*PRSAGS
Trigger: CGACCCGGCACTCCTGGGGCAGCTGCTGCTTGTGTG...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCGGGCCCAAGGGGAGCTaGAGAGCTGGGCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRGPKGS*RAGQEA
Trigger: TGCCTCCTGCCCAGCTCTGCAGCTCCCCTTGGGCCC...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGCGGAGGAGAAGGCACTaGGGAGACAGTGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVRRRRH*GDSGLP
Trigger: GGGAAGGCCACTGTCTCCCCAGTGCCTTCTCCTCCG...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGGCCATCCTGGGAGGCTaGCGGAAGCGTCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEAILGG*RKRLNA
Trigger: AGCATTCAGACGCTTCCGTCAGCCTCCCAGGATGGC...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCCAGGGGCTGCCATCCTaGGAGGCTGACGGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRQGLPS*EADGSV
Trigger: GACGCTTCCGTCAGCCTCCCAGGATGGCAGCCCCTG...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAACTGGTGCCAAGCTTCTaGGACCCTCCAGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATELVPSF*DPPGLQ
Trigger: CTGAAGGCCTGGAGGGTCCCAGAAGCTTGGCACCAG...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAACTGGGTTGGAACAGGTaGTGTCCTACTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATELGWNR*CPTEAR
Trigger: CCTGGCCTCAGTAGGACATCACCTGTTCCAACCCAG...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433976.7
CDS-3UTR TCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGAGTCTCCATTCCTCCTaGCCCACGGATGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVSLHSS*PTDGWI
Trigger: GATCCAGCCATCCGTGGGTCAGGAGGAATGGAGACT...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGAATCAGGATGTCACCTaGGACCAGTCCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVNQDVT*DQSRSR
Trigger: GCGGCTCCTGGACTGGTCTCAGGTGACATCCTGATT...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAATCCTGGCGTCACCTGTaGCCCACAAGTTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATESWRHL*PTSSGL
Trigger: GAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGA...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATCAGGACAGGGCAGGATaGAGTCTGGGGCTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHQDRAG*SLGLAS
Trigger: ACTAGCCAGCCCCAGACTTCATCCTGCCCTGTCCTG...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAATCCAGGGTGAGTTCCTaGCTGCCGGGTTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATESRVSS*LPGCDE
Trigger: CTCATCACAACCCGGCAGGCAGGAACTCACCCTGGA...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCCCTTCTGGAAGCGGTaGCGGGGGCGCAAGGCGCGA +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCPFWKR*RGRKAR
Trigger: TCGCGCCTTGCGCCCCCGGCACCGCTTCCAGAAGGG...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATCCGGATCACAGCAGCTaGCTCATCAGTGCCGGATCG +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHPDHSS*LISAGS
Trigger: CGATCCGGCACTGATGAGGCAGCTGCTGTGATCCGG...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGAACCATTCAGGAGGGTaGCCCCATGACCCAAACCCC +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVNHSGG*PHDPNP
Trigger: GGGGTTTGGGTCATGGGGGCACCCTCCTGAATGGTT...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CTGTCCCGAGTGCATGCTTGCTGGGAAACAACATTTGGAGTAGAGCTGAAGGCTCAGGGGCTGCCATCCTaGGAGGCTGACGGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: LSRVHACWETTFGVELKAQGLPS*EADGSV
Trigger: GACGCTTCCGTCAGCCTCCCAGGATGGCAGCCCCTG...AGCCTTCAGCTCTACTCCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CCA 90 bp ACGTGGGGATTCCTGACGGCATGCATTTCAACAGGTGTGGCGCAGCCCATGGAGGCATTTCAACAGGTGTaGCGCAGCCCATGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: TWGFLTACISTGVAQPMEAFQQV*RSPWSE
Trigger: CTCACTCCATGGGCTGCGCCACACCTGTTGAAATGC...CTCCATGGGCTGCGCCACACCTGTTGAAATGCATGCCGTCAGGAATCCCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAAGGCTTTTCCCCAGGGTaGACTTGCACGCGACCAGTA +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATEGFSPG*TCTRPV
Trigger: TACTGGTCGCGTGCAAGTCCACCCTGGGGAAAAGCC...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGGCACTGGGGAGACAGTaGCCTTCCCAGAGGCTGATA +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEALGRQ*PSQRLI
Trigger: TATCAGCCTCTGGGAAGGCCACTGTCTCCCCAGTGC...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGCGTCCACCTACAGAGTaGTCAACCTCACAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVRPPTE*STSQAS
Trigger: GCTGGCCTGTGAGGTTGACCACTCTGTAGGTGGACG...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGCCATGTTTATGCAGGTaGGAGGAGGCACGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVPCLCR*EEARKA
Trigger: AGCCTTCCGTGCCTCCTCTCACCTGCATAAACATGG...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAACCGCTCTGCATGCTGTaGAGAGGATCTGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATEPLCML*RGSGGQ
Trigger: TTGACCTCCAGATCCTCTTCACAGCATGCAGAGCGG...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGCCGCTCTGCATGCTGTaGAGAGGATCTGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVPLCML*RGSGGQ
Trigger: TTGACCTCCAGATCCTCTTCACAGCATGCAGAGCGG...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTAGGAGGGTGCCCCCATaGCCCAAACCCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFRRVPP*PKPPPG
Trigger: GCCTGGTGGGGGTTTGGGTCATGGGGGCACCCTCCT...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGCATAGCACTGGCATCTaGCCTGCTTCTGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVHSTGI*PASGED
Trigger: GTCCTCACCAGAAGCAGGTCAGATGCCAGTGCTATG...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGCCCTTCTGGAAGCGGTaGCGGGGGCGCAAGGCGCGA +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVPFWKR*RGRKAR
Trigger: TCGCGCCTTGCGCCCCCGGCACCGCTTCCAGAAGGG...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCGCGGAATGGAAGCGCTaGCCGGGTCTACCGCGAGCG +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFAEWKR*PGLPRA
Trigger: CGCTCGCGGTAGACCCGGGCAGCGCTTCCATTCCGC...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTAGGTCACCGCGTCCGTaGGCCAGGTCAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLRSPRP*ARSGAA
Trigger: GGCAGCCCCTGACCTGGCCCACGGACGCGGTGACCT...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306502.6
CDS-3UTR CCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGGCATTTCAACAGGTGTaGCGCAGCCCATGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEAFQQV*RSPWSE
Trigger: CTCACTCCATGGGCTGCGCCACACCTGTTGAAATGC...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTGGCGACTTTCCCTTCTaGAAGCGGTGCCGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFGDFPF*KRCRGR
Trigger: GCGCCCCCGGCACCGCTTCCAGAAGGGAAAGTCGCC...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGGTGGGACCCTACAGGTaGGTCATGCCTAAGAGCATG +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEVGPYR*VMPKSM
Trigger: CATGCTCTTAGGCATGACCCACCTGTAGGGTCCCAC...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CAA 72 bp TCCTACAGGCAAGGGGTGCAGGGCTGTGGGTTTTGGTaGAGATTACACCAGGATCACGGGTTAGCGGACAGC +
Preference number: 4 (lower is better)
Translates to: SYRQGVQGCGFW*RLHQDHGLADS
Trigger: GCTGTCCGCTAACCCGTGATCCTGGTGTAATCTCAACCAAAACCCACAGCCCTGCACCCCTTGCCTGTAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CAACAGGTGTGGCGCAGCCCATGGAGTGAGTTAGAGCTTTCCCACACGGCTTCCGACCTGAGAGTCCAGTaGAGGCTTTTCCGCATTCTT +
Preference number: 4 (lower is better)
Translates to: QQVWRSPWSELELSHTASDLRVQ*RLFRIL
Trigger: AAGAATGCGGAAAAGCCTTCACTGGACTCTCAGGTC...GGAAGCCGTGTGGGAAAGCTCTAACTCACTCCATGGGCTGCGCCACACCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGGGACTCAGGCAACTGTaGGTCAGTTCTAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEGLRQL*VSSSRD
Trigger: GTCTCTGCTAGAACTGACTCACAGTTGCCTGAGTCC...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATATGGTCATGATCTCCTaGCCTTGTGATCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHMVMIS*PCDPPT
Trigger: GGTGGGCGGATCACAAGGTCAGGAGATCATGACCAT...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCAACTGCTCTCCGCCCTaGCCTCAACTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRNCSPP*PQLLFL
Trigger: CAGGAAGAGGAGTTGAGGGCAGGGCGGAGAGCAGTT...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433976.7
CDS-3UTR GCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATGTGCGGTCACAGAGCTaGCCTCCATTGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHVRSQS*PPLWLL
Trigger: AAGAAGCCACAATGGAGGGCAGCTCTGTGACCGCAC...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTTCTCGCCCGTGTGTGTTCGTACGTGTCTAGTAAGGCCACAGCGCACAGTGAAAAAGCTTCTCCACACTaGGTGCGGTCACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLARVCSYVSSKATAHSEKASPH*VRSQSC
Trigger: GCAGCTCTGTGACCGCACGCAGTGTGGAGAAGCTTT...TTCACTGTGCGCTGTGGCCTTACTAGACACGTACGAACACACACGGGCGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR GCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGGCGGAATGGAAGCGCTaGCCGGGTCTACCGCGAGCG +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTAEWKR*PGLPRA
Trigger: CGCTCGCGGTAGACCCGGGCAGCGCTTCCATTCCGC...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGTTCAAGCAATTCTCCTaGCTCAGCCTCCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVFKQFS*LSLPRS
Trigger: GCTCCTTGGGAGGCTGAGGCAGGAGAATTGCTTGAA...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTCCTAGTGGGTGCTGGTaGCAAGCTTCTGGGACCCTC +
Preference number: 4 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFPSGCW*QASGTL
Trigger: GAGGGTCCCAGAAGCTTGGCACCAGCACCCACTAGG...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGCCCAGTAGCTGGGACTaGAGTCGCCCGCCACCACGC +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTPSSWD*SRPPPR
Trigger: GCGTGGTGGCGGGCGACTGCAGTCCCAGCTACTGGG...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCAGGGGCTGCCATCCTaGGAGGCTGACGGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCQGLPS*EADGSV
Trigger: GACGCTTCCGTCAGCCTCCCAGGATGGCAGCCCCTG...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp ACGTGGGGATTCCTGACGGCATGCATTTCAACAGGTGTGGCGCAGCCCATGGAGTTAAGTCGCCATTCTTaGAGAACTGCTCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: TWGFLTACISTGVAQPMELSRHS*RTALRP
Trigger: AGGGCGGAGAGCAGTTCTCCAAGAATGGCGACTTAA...CTCCATGGGCTGCGCCACACCTGTTGAAATGCATGCCGTCAGGAATCCCCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CCA 90 bp GGAACACTTCCCCACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTTGGCTTTTCCCCAGGGTaGACTTGCACGCGACCAGTA +
Preference number: 4 (lower is better)
Translates to: GTLPHSCCSQEICPECMLGFSPG*TCTRPV
Trigger: TACTGGTCGCGTGCAAGTCCACCCTGGGGAAAAGCC...AAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTAAACCACACCACTGGTaGGGCCTAGACGCGGACTCG +
Preference number: 4 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFKPHHW*GLDADS
Trigger: CGAGTCCGCGTCTAGGCCCCACCAGTGGTGTGGTTT...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATAGCCTCCCCAGTAGCTaGGACTGCAGTCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHSLPSS*DCSRPP
Trigger: TGGCGGGCGACTGCAGTCCCAGCTACTGGGGAGGCT...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGGGCTTCTCCCTCGTGTaGGTTTTTCCATGCTCATTC +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVGFSLV*VFPCSF
Trigger: GAATGAGCATGGAAAAACTCACACGAGGGAGAAGCC...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATCATAGGGCTCCAGGGTaGGTTCCTGCCTGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHHRAPG*VPACRV
Trigger: AACCCGGCAGGCAGGAACTCACCCTGGAGCCCTATG...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGGACCTTAGAGAACACTaGGGGCTTTCTCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEDLREH*GLSLCL
Trigger: CAGACACAGAGAAAGCCCTCAGTGTTCTCTAAGGTC...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCGCAGCAGCTGCCCCATaGATGCCGGATCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFAAAAP*MPDHSS
Trigger: GCTGCTGTGATCCGGCATTCATGGGGCAGCTGCTGC...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAGTCCGAGCACCAGGATaGTGCAGTCCTGGCGTCACC +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSVRAPG*CSPGVT
Trigger: GGTGACGCCAGGACTGCATCATCCTGGTGCTCGGAC...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAAGGTAGTCGTCTTAATTaGGGTCTGTGCTGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATEGSRLN*GLCWGD
Trigger: ATCACCCCAGCACAGACCTCAATTAAGACGACTACC...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATAGGAGGGTGCCCCCATaGCCCAAACCCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNRRVPP*PKPPPG
Trigger: GCCTGGTGGGGGTTTGGGTCATGGGGGCACCCTCCT...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATGAGTTGCATAGGCAGTaGGTGGATTCGCATACGCAG +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHELHRQ*VDSHTQ
Trigger: CTGCGTATGCGAATCCACTCACTGCCTATGCAACTC...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATGTCAAGGTGAGTGAGTaGCACACACAGGTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHVKVSE*HTQVPD
Trigger: GTCAGGAACCTGTGTGTGTCACTCACTCACCTTGAC...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTGCGGACTCGTCAAGGTaGGTGAGTGACACACACAGG +
Preference number: 4 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFADSSR*VSDTHR
Trigger: CCTGTGTGTGTCACTCACTCACCTTGACGAGTCCGC...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGAACCAAGATCTATCCTaGCGAAGTGCTGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVNQDLS*RSAGPL
Trigger: CAAAGGGCCAGCACTTCGGCAGGATAGATCTTGGTT...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp ACGTGGGGATTCCTGACGGCATGCATTTCAACAGGTGTGGCGCAGCCCATGGAGACACTTCCCCACAGCTaGTGTAGTCAAGAGATCTGT +
Preference number: 4 (lower is better)
Translates to: TWGFLTACISTGVAQPMETLPHS*CSQEIC
Trigger: ACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGT...CTCCATGGGCTGCGCCACACCTGTTGAAATGCATGCCGTCAGGAATCCCCACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR GCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATGGATTCCTGACGGCATaGATTTCAACAGGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHGFLTA*ISTGVA
Trigger: CGCCACACCTGTTGAAATGCATGCCGTCAGGAATCC...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGCCAGATTGCAGCAGCTaGCAGGACCGCTCTGCATGC +
Preference number: 4 (lower is better)
Translates to: DADCLATFLKSWTSGEREPDCSS*QDRSAC
Trigger: GCATGCAGAGCGGTCCTGGCAGCTGCTGCAATCTGG...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATCAGCTGCCCCAGGAGTaGCAGATTGCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHQLPQE*QIAAAA
Trigger: GGCAGCTGCTGCAATCTGGCACTCCTGGGGCAGCTG...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCCCGGGTCGCAGCAGCTaGCCCATGAATGCCGGATCA +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFPGRSS*PMNAGS
Trigger: TGATCCGGCATTCATGGGGCAGCTGCTGCGACCCGG...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATGATGAGATGGAAAGCTaGAGCGGAGGAGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHDEMES*SGGEGT
Trigger: AGTGCCTTCTCCTCCGCTGCAGCTTTCCATCTCATC...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGTTAAGTCGCCATTCTTaGAGAACTGCTCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVLSRHS*RTALRP
Trigger: AGGGCGGAGAGCAGTTCTCCAAGAATGGCGACTTAA...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433976.7
CDS-3UTR CCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATGGCGACTTTCCCTTCTaGAAGCGGTGCCGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNGDFPF*KRCRGR
Trigger: GCGCCCCCGGCACCGCTTCCAGAAGGGAAAGTCGCC...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCGTGGGACCCTACAGGTaGGTCATGCCTAAGAGCATG +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRVGPYR*VMPKSM
Trigger: CATGCTCTTAGGCATGACCCACCTGTAGGGTCCCAC...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGGCTGTGAAGAGGATCTaGAGGTCAACAAGGACACTC +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVAVKRI*RSTRTL
Trigger: GAGTGTCCTTGTTGACCTCCAGATCCTCTTCACAGC...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAGGCAGGGTGGTGTCTaGGCTACCGCCTGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFRQGGV*ATACSG
Trigger: TCCTGAGCAGGCGGTAGCCCAGACACCACCCTGCCT...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGAGGGGTGCAGGGCTGTaGGTTTTGGTTGAGATTACA +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCERGAGL*VLVEIT
Trigger: TGTAATCTCAACCAAAACCCACAGCCCTGCACCCCT...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGGGGAGCTGCAGAGCTaGGCAGGAGGCAGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHGELQS*AGGRSQ
Trigger: CTGACTTCTGCCTCCTGCCCAGCTCTGCAGCTCCCC...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGCAAGAATCCCTGGGCTaGGTAAGACCTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEQESLG*VRPCHR
Trigger: TCTGTGACAAGGTCTTACCCAGCCCAGGGATTCTTG...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGCCATCCTGGGAGGCTaGCGGAAGCGTCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHAILGG*RKRLNA
Trigger: AGCATTCAGACGCTTCCGTCAGCCTCCCAGGATGGC...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGCTGGGTTGGAACAGGTaGTGTCCTACTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: DADCLATFLKSWTSGERELGWNR*CPTEAR
Trigger: CCTGGCCTCAGTAGGACATCACCTGTTCCAACCCAG...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306502.6
ENST00000433976.7
CDS-3UTR TCA 90 bp ACGTGGGGATTCCTGACGGCATGCATTTCAACAGGTGTGGCGCAGCCCATGGAGCGTCTGTGTCTCATTTaGTGCTCTGAACCAAGATCT +
Preference number: 4 (lower is better)
Translates to: TWGFLTACISTGVAQPMERLCLI*CSEPRS
Trigger: AGATCTTGGTTCAGAGCATCAAATGAGACACAGACG...CTCCATGGGCTGCGCCACACCTGTTGAAATGCATGCCGTCAGGAATCCCCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp CAACAGGTGTGGCGCAGCCCATGGAGTGAGTTAGAGCTTTCCCACACGGCTTCCACGTGCCTGAAGGTATaGCTGATTAAGGAACACTTC +
Preference number: 4 (lower is better)
Translates to: QQVWRSPWSELELSHTASTCLKV*LIKEHF
Trigger: GAAGTGTTCCTTAATCAGTCATACCTTCAGGCACGT...GGAAGCCGTGTGGGAAAGCTCTAACTCACTCCATGGGCTGCGCCACACCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp CTTCTCGCCCGTGTGTGTTCGTACGTGTCTAGTAAGGCCACAGCGCACAGTGAAATACGTGGGGATTCCTaGCGGCATGCATTTCAACAG +
Preference number: 4 (lower is better)
Translates to: LLARVCSYVSSKATAHSEIRGDS*RHAFQQ
Trigger: CTGTTGAAATGCATGCCGTCAGGAATCCCCACGTAT...TTCACTGTGCGCTGTGGCCTTACTAGACACGTACGAACACACACGGGCGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTGTGTTTAGTGAGGCCTaGGCGCCCTGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFVFSEA*APCEGF
Trigger: AAAGCCTTCACAGGGCGCTCAGGCCTCACTAAACAC...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCGTGCACGATAAGGTGTaGGGATGTGGTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRVHDKV*GCGEGL
Trigger: AAGGCCTTCACCACATCCTCACACCTTATCGTGCAC...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGTCCTGGCGTCACCTGTaGCCCACAAGTTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: DADCLATFLKSWTSGERESWRHL*PTSSGL
Trigger: GAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGA...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATGCTGTGGGTTTTGGTTaGGATTACACCAGGATCACG +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHAVGFG*DYTRIT
Trigger: CGTGATCCTGGTGTAATCTCAACCAAAACCCACAGC...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATAGAAGAGGCTCTGTGTaGAGCCAAGTCAAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHRRGSV*SQVKGV
Trigger: TACTCCCTTGACTTGGCTTCACACAGAGCCTCTTCT...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGGAAGGTCAAGGGCAGTaGGCCAAACCCGAGGGACGG +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTEGQGQ*AKPEGR
Trigger: CCGTCCCTCGGGTTTGGCTCACTGCCCTTGACCTTC...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCTGGCCAGGATGGTCTTaGTCTCCTGACCTTGTGATC +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRWPGWS*SPDLVI
Trigger: GATCACAAGGTCAGGAGATCAAGACCATCCTGGCCA...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATGGAGGCAAGTTCTATTaGAACCATGTGGGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHGGKFY*NHVGRA
Trigger: AGCACGACCCACATGGTTTCAATAGAACTTGCCTCC...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCTGGCCAGGATGGTCATaGTCTCCTGACCTTGTGATC +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRWPGWS*SPDLVI
Trigger: GATCACAAGGTCAGGAGATCATGACCATCCTGGCCA...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGAACTGCTCTCCGCCCTaGCCTCAACTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: DADCLATFLKSWTSGERENCSPP*PQLLFL
Trigger: CAGGAAGAGGAGTTGAGGGCAGGGCGGAGAGCAGTT...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306502.6
ENST00000433976.7
CDS-3UTR GCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTCCATTCTTGGAGAACTaGTCTCCGCCCTGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFPFLEN*SPPCPQ
Trigger: TTGAGGGCAGGGCGGAGAGCAGTTCTCCAAGAATGG...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433976.7
CDS-3UTR GCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCTTCTCCACACTGCGTaGGGTCACAGAGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFLLHTA*GHRAAL
Trigger: GAGGGCAGCTCTGTGACCGCACGCAGTGTGGAGAAG...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTTCTCGCCCGTGTGTGTTCGTACGTGTCTAGTAAGGCCACAGCGCACAGTGAAGAGATCTGTCCCGAGTaGATGCTTGCTGGGAAACAA +
Preference number: 4 (lower is better)
Translates to: LLARVCSYVSSKATAHSEEICPE*MLAGKQ
Trigger: TTGTTTCCCAGCAAGCATGCACTCGGGACAGATCTC...TTCACTGTGCGCTGTGGCCTTACTAGACACGTACGAACACACACGGGCGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR GCA 90 bp GGAACACTTCCCCACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTTGGATTCCTGACGGCATaGATTTCAACAGGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: GTLPHSCCSQEICPECMLGFLTA*ISTGVA
Trigger: CGCCACACCTGTTGAAATGCATGCCGTCAGGAATCC...AAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR GCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCCGGATCACAGCAGCTaGCTCATCAGTGCCGGATCG +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFPDHSS*LISAGS
Trigger: CGATCCGGCACTGATGAGGCAGCTGCTGTGATCCGG...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TTTCCCACACGGCTTCCATTTCCATGTTTCTTCTCCGTTGTGACTTCCCGCACGAGCTGCCCTCCATTGTaGCTTCTTGCCGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FPTRLPFPCFFSVVTSRTSCPPL*LLAVCV
Trigger: GACACAGACGGCAAGAAGCCACAATGGAGGGCAGCT...CGTGCGGGAAGTCACAACGGAGAAGAAACATGGAAATGGAAGCCGTGTGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CCA 90 bp CTGTCCCGAGTGCATGCTTGCTGGGAAACAACATTTGGAGTAGAGCTGAAGGCTGTGTGGCGCAGCCCATaGAGTGAGTTAGAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSRVHACWETTFGVELKAVWRSP*SELELS
Trigger: GGAAAGCTCTAACTCACTCCATGGGCTGCGCCACAC...AGCCTTCAGCTCTACTCCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CCA 90 bp GGAACACTTCCCCACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTTCATTCCCTACATACGTaGGGATTCCTGACGGCATGC +
Preference number: 4 (lower is better)
Translates to: GTLPHSCCSQEICPECMLHSLHT*GFLTAC
Trigger: GCATGCCGTCAGGAATCCCCACGTATGTAGGGAATG...AAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTTCCAGCTCCGCGGAATaGAAGCGCTGCCCGGGTCTA +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLSSSAE*KRCPGL
Trigger: TAGACCCGGGCAGCGCTTCCATTCCGCGGAGCTGGA...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTCTCCTGACCCACGGATaGCTGGATCCCTATTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFLLTHG*LDPYFQ
Trigger: CTGGAAATAGGGATCCAGCCATCCGTGGGTCAGGAG...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATGTGACCCACAAGTTCTaGACTCAGGCAACTGTGAGT +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHVTHKF*TQATVS
Trigger: ACTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCAC...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGCAGGGCTGTGGGTTTTaGTTGAGATTACACCAGGAT +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEQGCGF*LRLHQD
Trigger: ATCCTGGTGTAATCTCAACCAAAACCCACAGCCCTG...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTGGTGCCAAGCTTCTaGGACCCTCCAGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCLVPSF*DPPGLQ
Trigger: CTGAAGGCCTGGAGGGTCCCAGAAGCTTGGCACCAG...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCCACCGCCCCCGGCCTaGGCTTGGTTTTCTTTAGGT +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFPPPPA*AWFSLG
Trigger: ACCTAAAGAAAACCAAGCCCAGGCCGGGGGCGGTGG...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCACCACCGCCCCCGGCCTaGGCTTGGTTTTCTTTAGGT +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSPPPPA*AWFSLG
Trigger: ACCTAAAGAAAACCAAGCCCAGGCCGGGGGCGGTGG...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CAA 72 bp ATTTTCCTACAGGCAAGGGGTGCAGGGCTGTGGGTTTaGGTTGAGATTACACCAGGATCACGGGTTAGCGGA +
Preference number: 4 (lower is better)
Translates to: IFLQARGAGLWV*VEITPGSRVSG
Trigger: TCCGCTAACCCGTGATCCTGGTGTAATCTCAACCAAAACCCACAGCCCTGCACCCCTTGCCTGTAGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTGCCATCCTGGGAGGCTaGCGGAAGCGTCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLAILGG*RKRLNA
Trigger: AGCATTCAGACGCTTCCGTCAGCCTCCCAGGATGGC...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCAAGGCTTTTCCACACTaGCCCAACACGGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRKAFPH*PNTENC
Trigger: GCAGTTTTCCGTGTTGGGTCAGTGTGGAAAAGCCTT...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTGCGCAGCCCATGGAGTaGGTTAGAGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCAQPME*VRAFPH
Trigger: GTGTGGGAAAGCTCTAACTCACTCCATGGGCTGCGC...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTCTGTCCAGGGTCTGTTTGGACGTGTTTAGAAAGACCTGAGAGTCCAGTGAAGGCGCAGCCCATGGAGTaGGTTAGAGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: FCPGSVWTCLERPESPVKAQPME*VRAFPH
Trigger: GTGTGGGAAAGCTCTAACTCACTCCATGGGCTGCGC...CTTCACTGGACTCTCAGGTCTTTCTAAACACGTCCAAACAGACCCTGGACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATGTGAATGAGTGTAGCTaGCAGCTTCCCCACATTCTT +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHVNECS*QLPHIL
Trigger: AAGAATGTGGGGAAGCTGTCAGCTACACTCATTCAC...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTAGTCTCCATTCCTCCTaGCCCACGGATGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFSLHSS*PTDGWI
Trigger: GATCCAGCCATCCGTGGGTCAGGAGGAATGGAGACT...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAAGGTCTGTGCTGGGGTaGTGTCTCCACCAACAGTGG +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSRSVLG*CLHQQW
Trigger: CCACTGTTGGTGGAGACATCACCCCAGCACAGACCT...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAAATAAGTTGCCCTAAGTaGCACAGAACACGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATEISCPK*HRTRSE
Trigger: CTCAGAACGTGTTCTGTGTCACTTAGGGCAACTTAT...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTACTCGTCAAGGTGAGTaGGTGACACACACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFTRQGE*VTHTGS
Trigger: GGAACCTGTGTGTGTCACTCACTCACCTTGACGAGT...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGGCTTCTTGCCGTCTGTGTCTCATTTGATGCTCTGAACCAAGATCTATCCTGCAACTGCTCTCCGCCCTaGCCTCAACTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: WLLAVCVSFDALNQDLSCNCSPP*PQLLFL
Trigger: CAGGAAGAGGAGTTGAGGGCAGGGCGGAGAGCAGTT...GCAGGATAGATCTTGGTTCAGAGCATCAAATGAGACACAGACGGCAAGAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR GCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGCTTCTCCACACTGCGTaGGGTCACAGAGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVLLHTA*GHRAAL
Trigger: GAGGGCAGCTCTGTGACCGCACGCAGTGTGGAGAAG...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTTCCAGGGTGAGTTCCTaGCTGCCGGGTTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCSRVSS*LPGCDE
Trigger: CTCATCACAACCCGGCAGGCAGGAACTCACCCTGGA...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTCACTCTGCCCCTCCTTaGACCCTGGTGTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFHSAPP*TLVFYL
Trigger: CAGATAAAACACCAGGGTGCAAGGAGGGGCAGAGTG...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTCGCCCCTCTCCACTCTaGCCCTCCTTGCACCCTGGT +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEARPSPL*PSLHPG
Trigger: ACCAGGGTGCAAGGAGGGGCAGAGTGGAGAGGGGCG...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTCGCCCCTCTCCACTCTaGCCCTCCTTGCACCCTGGT +
Preference number: 4 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIRPSPL*PSLHPG
Trigger: ACCAGGGTGCAAGGAGGGGCAGAGTGGAGAGGGGCG...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATCCGGGTCGCAGCAGCTaGCCCATGAATGCCGGATCA +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNPGRSS*PMNAGS
Trigger: TGATCCGGCATTCATGGGGCAGCTGCTGCGACCCGG...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATCCTACAGGCAAGGGGTaGAGGGCTGTGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHPTGKG*RAVGFG
Trigger: ACCAAAACCCACAGCCCTGCACCCCTTGCCTGTAGG...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGCAGTATGAGTTGAGTTaGGTTGCATATGCAGTGCGA +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEQYELS*VAYAVR
Trigger: TCGCACTGCATATGCAACGCAACTCAACTCATACTG...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGCAGGGGCTGCCATCCTaGGAGGCTGACGGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: QFSIMLGVLVCLCCYISEQGLPS*EADGSV
Trigger: GACGCTTCCGTCAGCCTCCCAGGATGGCAGCCCCTG...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTGTGGCGCAGCCCATaGAGTGAGTTAGAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: DADCLATFLKSWTSGEREVWRSP*SELELS
Trigger: GGAAAGCTCTAACTCACTCCATGGGCTGCGCCACAC...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTGGCTTTTCCCCAGGGTaGACTTGCACGCGACCAGTA +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFGFSPG*TCTRPV
Trigger: TACTGGTCGCGTGCAAGTCCACCCTGGGGAAAAGCC...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCGGCTTTTCCCCAGGGTaGACTTGCACGCGACCAGTA +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFGFSPG*TCTRPV
Trigger: TACTGGTCGCGTGCAAGTCCACCCTGGGGAAAAGCC...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGCAAGTCATGGACATCTaGAGAACGAGAGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVQVMDI*RTRGLS
Trigger: TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTG...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTGCATATCAGGCAGGGTaGTGTCTGGGCTACCGCCTG +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLAYQAG*CLGYRL
Trigger: CAGGCGGTAGCCCAGACACCACCCTGCCTGATATGC...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCAGGGGTGCAGGGCTGTaGGTTTTGGTTGAGATTACA +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRRGAGL*VLVEIT
Trigger: TGTAATCTCAACCAAAACCCACAGCCCTGCACCCCT...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGCACTGGGGAGACAGTaGCCTTCCCAGAGGCTGATA +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHALGRQ*PSQRLI
Trigger: TATCAGCCTCTGGGAAGGCCACTGTCTCCCCAGTGC...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGGGGAGCTGCAGAGCTaGGCAGGAGGCAGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNGELQS*AGGRSQ
Trigger: CTGACTTCTGCCTCCTGCCCAGCTCTGCAGCTCCCC...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTGGAAAACCACACCACTaGTGGGGCCTAGACGCGGAC +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLGKPHH*WGLDAD
Trigger: GTCCGCGTCTAGGCCCCACCAGTGGTGTGGTTTTCC...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CAATGCCAACAATTAAAGGTGGCAACAGATGAGCTAAATAGCCACACTCAATCCAGCCTCCCCAGTAGCTaGGACTGCAGTCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: QCQQLKVATDELNSHTQSSLPSS*DCSRPP
Trigger: TGGCGGGCGACTGCAGTCCCAGCTACTGGGGAGGCT...GGATTGAGTGTGGCTATTTAGCTCATCTGTTGCCACCTTTAATTGTTGGCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGCTTTCGGCAGCTTCGTaGTGGCAGGGGCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: DADCLATFLKSWTSGERELSAAS*WQGLGF
Trigger: AAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAG...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTTCTCGCCCGTGTGTGTTCGTACGTGTCTAGTAAGGCCACAGCGCACAGTGAATCTCATTTGATGCTCTaGACCAAGATCTATCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLARVCSYVSSKATAHSESHLML*TKIYPA
Trigger: GGCAGGATAGATCTTGGTTCAGAGCATCAAATGAGA...TTCACTGTGCGCTGTGGCCTTACTAGACACGTACGAACACACACGGGCGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATCGTCTGTGTCTCATTTaGTGCTCTGAACCAAGATCT +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHRLCLI*CSEPRS
Trigger: AGATCTTGGTTCAGAGCATCAAATGAGACACAGACG...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GGAACACTTCCCCACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTTCTGTCTCCTGTATTTTaGGTTCTCACGTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GTLPHSCCSQEICPECMLLSPVF*VLTCVL
Trigger: CAGCACACACGTGAGAACTCAAAATACAGGAGACAG...AAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGGCGCAGCCCATGGAGTaGGTTAGAGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVAQPME*VRAFPH
Trigger: GTGTGGGAAAGCTCTAACTCACTCCATGGGCTGCGC...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTGTCCCGAGTGCATGCTTGCTGGGAAACAACATTTGGAGTAGAGCTGAAGGCTGGCTTCTCCCTCGTGTaGGTTTTTCCATGCTCATTC +
Preference number: 4 (lower is better)
Translates to: LSRVHACWETTFGVELKAGFSLV*VFPCSF
Trigger: GAATGAGCATGGAAAAACTCACACGAGGGAGAAGCC...AGCCTTCAGCTCTACTCCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAGTGTTTAGTGAGGCCTaGGCGCCCTGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSVFSEA*APCEGF
Trigger: AAAGCCTTCACAGGGCGCTCAGGCCTCACTAAACAC...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GGAACACTTCCCCACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTTTGTGTCTGTTCTTCATaGAGGCAGACTGAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: GTLPHSCCSQEICPECMLCVCSS*RQTESL
Trigger: TAGGGACTCAGTCTGCCTTCATGAAGAACAGACACA...AAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAATCCTCACTCCAAGAATaGTCAGTGCAGCATCATAAA +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATESSLQE*SVQHHK
Trigger: TTTATGATGCTGCACTGATCATTCTTGGAGTGAGGA...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTAATCAGGATGTCACCTaGGACCAGTCCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLNQDVT*DQSRSR
Trigger: GCGGCTCCTGGACTGGTCTCAGGTGACATCCTGATT...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTGTCCGAGCACCAGGATaGTGCAGTCCTGGCGTCACC +
Preference number: 4 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIVRAPG*CSPGVT
Trigger: GGTGACGCCAGGACTGCATCATCCTGGTGCTCGGAC...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCCAGCACTGCCACACTaGGGGTCAAAGCTCAACATG +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFPALPH*GSKLNM
Trigger: CATGTTGAGCTTTGACCCTCAGTGTGGCAGTGCTGG...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGAGCAAGACCCCAGGATaGAAATGTACCCTAACAAAA +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVSKTPG*KCTLTK
Trigger: TTTTGTTAGGGTACATTTTCATCCTGGGGTCTTGCT...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAAATATGCAGTATGAGTTaGGTTGCGTTGCATATGCAG +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATEICSMS*VALHMQ
Trigger: CTGCATATGCAACGCAACTCAACTCATACTGCATAT...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAAACACACACAGGTTCCTaGCATGGAAAGTTTATCACT +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATETHTGS*HGKFIT
Trigger: AGTGATAAACTTTCCATGTCAGGAACCTGTGTGTGT...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTGATCTCCTGACCTTGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEADLLTL*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACAAGGTCAGGAGATC...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAATGGTCATGATCTCCTaGCCTTGTGATCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSMVMIS*PCDPPT
Trigger: GGTGGGCGGATCACAAGGTCAGGAGATCATGACCAT...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCCCATTCTTGGAGAACTaGTCTCCGCCCTGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFPFLEN*SPPCPQ
Trigger: TTGAGGGCAGGGCGGAGAGCAGTTCTCCAAGAATGG...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306502.6
ENST00000433976.7
CDS-3UTR GCA 90 bp TGGCTTCTTGCCGTCTGTGTCTCATTTGATGCTCTGAACCAAGATCTATCCTGCGTGCGGTCACAGAGCTaGCCTCCATTGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: WLLAVCVSFDALNQDLSCVRSQS*PPLWLL
Trigger: AAGAAGCCACAATGGAGGGCAGCTCTGTGACCGCAC...GCAGGATAGATCTTGGTTCAGAGCATCAAATGAGACACAGACGGCAAGAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR GCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCGTGCGGTCACAGAGCTaGCCTCCATTGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFVRSQS*PPLWLL
Trigger: AAGAAGCCACAATGGAGGGCAGCTCTGTGACCGCAC...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTAAAGCTTCTCCACACTaGGTGCGGTCACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCKASPH*VRSQSC
Trigger: GCAGCTCTGTGACCGCACGCAGTGTGGAGAAGCTTT...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GGAACACTTCCCCACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTTGTATGGATTCTCGCGTaGTCAGTCAGGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GTLPHSCCSQEICPECMLVWILA*SVRLEE
Trigger: TTCTTCAAGCCTGACTGAGCACGCGAGAATCCATAC...AAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR GCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTTCCAGGGTGAGTTCCTaGCTGCCGGGTTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLSRVSS*LPGCDE
Trigger: CTCATCACAACCCGGCAGGCAGGAACTCACCCTGGA...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTGGCTTTCTCTGTGTCTaGTGCATAGGGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFGFLCV*CIGLQG
Trigger: ACCCTGGAGCCCTATGCAGCAGACACAGAGAAAGCC...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTTCACCCGTCCGGCACTaGCTAAGGTACAGGAATTCC +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCSPVRH*LRYRNS
Trigger: GGAATTCCTGTACCTTAGGCAGTGCCGGACGGGTGA...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATCCAGATTGCAGCAGCTaGCAGGACCGCTCTGCATGC +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNPDCSS*QDRSAC
Trigger: GCATGCAGAGCGGTCCTGGCAGCTGCTGCAATCTGG...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGCAGCTGCCCCAGGAGTaGCAGATTGCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QFSIMLGVLVCLCCYISEQLPQE*QIAAAA
Trigger: GGCAGCTGCTGCAATCTGGCACTCCTGGGGCAGCTG...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTCCGGATCGCAGCAGCTaGCCCAGGAGTGCCAGATTG +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAPDRSS*PRSARL
Trigger: CAATCTGGCACTCCTGGGGCAGCTGCTGCGATCCGG...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCCACACAAGCAGCAGCTaGCCCAGGAGTGCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVHTSSS*PRSAGS
Trigger: CGACCCGGCACTCCTGGGGCAGCTGCTGCTTGTGTG...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTAACCATTCAGGAGGGTaGCCCCATGACCCAAACCCC +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLNHSGG*PHDPNP
Trigger: GGGGTTTGGGTCATGGGGGCACCCTCCTGAATGGTT...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTTGGGGCTGGCTAGTCTaGATACTTCCAGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLWGWLV*ILPAGP
Trigger: TGGGCCTGCTGGAAGTATGCAGACTAGCCAGCCCCA...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGAGTAATGAAGAGAAGTaGAAACCAACACCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCESNEEK*KPTPQG
Trigger: TCCTTGGGGTGTTGGTTTGCACTTCTCTTCATTACT...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTAGCTGCCCTCCATTGTaGCTTCTTGCCGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFSCPPL*LLAVCV
Trigger: GACACAGACGGCAAGAAGCCACAATGGAGGGCAGCT...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAAGCTGCCCTCCATTGTaGCTTCTTGCCGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSSCPPL*LLAVCV
Trigger: GACACAGACGGCAAGAAGCCACAATGGAGGGCAGCT...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTGTGGCGCAGCCCATaGAGTGAGTTAGAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHVWRSP*SELELS
Trigger: GGAAAGCTCTAACTCACTCCATGGGCTGCGCCACAC...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTGCATTTCAACAGGTGTaGCGCAGCCCATGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFAFQQV*RSPWSE
Trigger: CTCACTCCATGGGCTGCGCCACACCTGTTGAAATGC...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCCATGTTGAGTTAGGCTaGAAGAAACAGGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRHVELG*KKQGRL
Trigger: AAGCCTCCCCTGTTTCTTCCAGCCTAACTCAACATG...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGGCTTGTGAATCTATGTaGAAGGTACAGTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVACESM*KVQSPF
Trigger: GAATGGAGACTGTACCTTCCACATAGATTCACAAGC...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAACATTGGCCAGTGTaGGACCCTACAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFQHWPV*DPTGGS
Trigger: TGACCCACCTGTAGGGTCCCACACTGGCCAATGTTG...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CAATGCCAACAATTAAAGGTGGCAACAGATGAGCTAAATAGCCACACTCAATCCAGGCAGGGTGGTGTCTaGGCTACCGCCTGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QCQQLKVATDELNSHTQSRQGGV*ATACSG
Trigger: TCCTGAGCAGGCGGTAGCCCAGACACCACCCTGCCT...GGATTGAGTGTGGCTATTTAGCTCATCTGTTGCCACCTTTAATTGTTGGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CAATGCCAACAATTAAAGGTGGCAACAGATGAGCTAAATAGCCACACTCAATCCCGGAGGAGAAGGCACTaGGGAGACAGTGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: QCQQLKVATDELNSHTQSRRRRH*GDSGLP
Trigger: GGGAAGGCCACTGTCTCCCCAGTGCCTTCTCCTCCG...GGATTGAGTGTGGCTATTTAGCTCATCTGTTGCCACCTTTAATTGTTGGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATAGAAAGAGGCTTATTTaGCTCATGGTTCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHRKRLI*LMVQQA
Trigger: AGCCTGCTGAACCATGAGCCAAATAAGCCTCTTTCT...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTTCTAGTGCCTCATCCTaGGCTGACTTCAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFSSASS*ADFREE
Trigger: CTCCTCCCTGAAGTCAGCCCAGGATGAGGCACTAGA...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGCACAGGTTCCTGACATaGAAAGTTTATCACTCACAG +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEHRFLT*KVYHSQ
Trigger: CTGTGAGTGATAAACTTTCCATGTCAGGAACCTGTG...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGCGTCCACCTACAGAGTaGTCAACCTCACAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTRPPTE*STSQAS
Trigger: GCTGGCCTGTGAGGTTGACCACTCTGTAGGTGGACG...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAATCTATTGAAACCATGTaGGTCGTGCTTTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATESIETM*VVLSML
Trigger: CAACATGGAAAGCACGACCCACATGGTTTCAATAGA...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGCCCCCGGCCTGGGCTTaGTTTTCTTTAGGTTTATCC +
Preference number: 4 (lower is better)
Translates to: DADCLATFLKSWTSGEREPPAWA*FSLGLS
Trigger: GGATAAACCTAAAGAAAACCAAGCCCAGGCCGGGGG...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAACTTTTCCAGTCCTTCTaGAATGGTATTTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATELFQSF*NGILPL
Trigger: CAGTGGCAAAATACCATTCCAGAAGGACTGGAAAAG...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CAA 72 bp GCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTaGCTGGGAAACAACATTTGGAGTAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: AAVVKRSVPSAC*LGNNIWSRAEG
Trigger: GCCTTCAGCTCTACTCCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCTCTCATTTGATGCTCTaGACCAAGATCTATCCTGCC +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRSHLML*TKIYPA
Trigger: GGCAGGATAGATCTTGGTTCAGAGCATCAAATGAGA...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCCGTCTGTGTCTCATTTaGTGCTCTGAACCAAGATCT +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRRLCLI*CSEPRS
Trigger: AGATCTTGGTTCAGAGCATCAAATGAGACACAGACG...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGCGCAGCCCATGGAGTaGGTTAGAGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNAQPME*VRAFPH
Trigger: GTGTGGGAAAGCTCTAACTCACTCCATGGGCTGCGC...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACAGGTCTGTGCTGGGGTaGTGTCTCCACCAACAGTGG +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNRSVLG*CLHQQW
Trigger: CCACTGTTGGTGGAGACATCACCCCAGCACAGACCT...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGCATGGGCATCGCTGCTaGGGAGGTTCTGAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVHGHRC*GGSEEV
Trigger: CACTTCTTCAGAACCTCCTCAGCAGCGATGCCCATG...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCCAGCACTGCCACACTaGGGGTCAAAGCTCAACATG +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLPALPH*GSKLNM
Trigger: CATGTTGAGCTTTGACCCTCAGTGTGGCAGTGCTGG...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGAAGGTCAAGGGCAGTaGGCCAAACCCGAGGGACGG +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVEGQGQ*AKPEGR
Trigger: CCGTCCCTCGGGTTTGGCTCACTGCCCTTGACCTTC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAAACACAGAACACGTTCTaGGAGTTAGGAAGAGAAATA +
Preference number: 4 (lower is better)
Translates to: VFKGLIQEAPVTGPSATETQNTF*ELGREI
Trigger: TATTTCTCTTCCTAACTCTCAGAACGTGTTCTGTGT...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTCAGGACAGGGCAGGATaGAGTCTGGGGCTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAQDRAG*SLGLAS
Trigger: ACTAGCCAGCCCCAGACTTCATCCTGCCCTGTCCTG...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAGTCAAGGTGAGTGAGTaGCACACACAGGTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSVKVSE*HTQVPD
Trigger: GTCAGGAACCTGTGTGTGTCACTCACTCACCTTGAC...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATGCGGACTCGTCAAGGTaGGTGAGTGACACACACAGG +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNADSSR*VSDTHR
Trigger: CCTGTGTGTGTCACTCACTCACCTTGACGAGTCCGC...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATTCGTGCTTTCCATGTTaGTTCTGTCTTAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHSCFPC*FCLKAY
Trigger: GTAGGCTTTAAGACAGAATCAACATGGAAAGCACGA...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGATCTCCTGACCTTGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVDLLTL*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACAAGGTCAGGAGATC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTGTGCGGTCACAGAGCTaGCCTCCATTGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLVRSQS*PPLWLL
Trigger: AAGAAGCCACAATGGAGGGCAGCTCTGTGACCGCAC...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGAAAGCTTCTCCACACTaGGTGCGGTCACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTKASPH*VRSQSC
Trigger: GCAGCTCTGTGACCGCACGCAGTGTGGAGAAGCTTT...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGGCTTCTTGCCGTCTGTGTCTCATTTGATGCTCTGAACCAAGATCTATCCTGCTCCGCAAACCACACATaGAAAGGGCTTCTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: WLLAVCVSFDALNQDLSCSANHT*KGLLPR
Trigger: ACGAGGGAGAAGCCCTTTGCATGTGTGGTTTGCGGA...GCAGGATAGATCTTGGTTCAGAGCATCAAATGAGACACAGACGGCAAGAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR GCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATTTTCTCTGTGTCTGCTaGATAGGGCTCCAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHFLCVC*IGLQGE
Trigger: CTCACCCTGGAGCCCTATGCAGCAGACACAGAGAAA...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCCCGGATCGCAGCAGCTaGCCCAGGAGTGCCAGATTG +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVPDRSS*PRSARL
Trigger: CAATCTGGCACTCCTGGGGCAGCTGCTGCGATCCGG...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCCATGAAGTCTTGCTCTaGCACTGTGTGTGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRHEVLL*HCVCLR
Trigger: CCTTAAACACACACAGTGGCAGAGCAAGACTTCATG...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCGTTCTAGCAGAGACCTaGAGGACTTATTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRVLAET*RTYFSQ
Trigger: TTGGCTGAAATAAGTCCTGCAGGTCTCTGCTAGAAC...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATTGGTTCAGCAGGCTGTaGAAGCATAGCACTGGCATC +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHWFSRL*KHSTGI
Trigger: GATGCCAGTGCTATGCTTGCACAGCCTGCTGAACCA...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATTGGGGCTGGCTAGTCTaGATACTTCCAGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNWGWLV*ILPAGP
Trigger: TGGGCCTGCTGGAAGTATGCAGACTAGCCAGCCCCA...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATGCAATCTCAGCTCACTaGATGCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNAISAH*MLCLPG
Trigger: ACCCGGGAGGCAGAGCATGCAGTGAGCTGAGATTGC...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTACAATCTCGACTGACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCTISTD*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTCAGTCGAGATTGT...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCACAATCTCGACTGACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFTISTD*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTCAGTCGAGATTGT...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGAGCTGCCCTCCATTGTaGCTTCTTGCCGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTSCPPL*LLAVCV
Trigger: GACACAGACGGCAAGAAGCCACAATGGAGGGCAGCT...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGGTGTGGCGCAGCCCATaGAGTGAGTTAGAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTVWRSP*SELELS
Trigger: GGAAAGCTCTAACTCACTCCATGGGCTGCGCCACAC...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GGAACACTTCCCCACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTTTGTCCAGGGTCTGTTTaGACGTGTTTAGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: GTLPHSCCSQEICPECMLCPGSV*TCLERP
Trigger: AGGTCTTTCTAAACACGTCCAAACAGACCCTGGACA...AAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCTCCAGCTCCGCGGAATaGAAGCGCTGCCCGGGTCTA +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVSSSAE*KRCPGL
Trigger: TAGACCCGGGCAGCGCTTCCATTCCGCGGAGCTGGA...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCGTTATGCCCCAACATTaGCCAGTGTGGGACCCTACA +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFVMPQH*PVWDPT
Trigger: TGTAGGGTCCCACACTGGCCAATGTTGGGGCATAAC...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTTATGCCCCAACATTaGCCAGTGTGGGACCCTACA +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHVMPQH*PVWDPT
Trigger: TGTAGGGTCCCACACTGGCCAATGTTGGGGCATAAC...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTAGGAACCCCAGTCCATaGGCATCGCTGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIRNPSP*ASLLRR
Trigger: CCTCCTCAGCAGCGATGCCCATGGACTGGGGTTCCT...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGGTTAGAAAAAGGAAGTaGCCGGAAATAAGTACTTGC +
Preference number: 4 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVVRKRK*PEISTC
Trigger: GCAAGTACTTATTTCCGGCCACTTCCTTTTTCTAAC...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGAAACCACACCACTGGTaGGGCCTAGACGCGGACTCG +
Preference number: 4 (lower is better)
Translates to: QFSIMLGVLVCLCCYISEKPHHW*GLDADS
Trigger: CGAGTCCGCGTCTAGGCCCCACCAGTGGTGTGGTTT...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTGGAAAACCACACCACTaGTGGGGCCTAGACGCGGAC +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAGKPHH*WGLDAD
Trigger: GTCCGCGTCTAGGCCCCACCAGTGGTGTGGTTTTCC...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGCTTTCGGCAGCTTCGTaGTGGCAGGGGCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTLSAAS*WQGLGF
Trigger: AAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAG...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CAA 72 bp CTGAACCAAGATCTATCCTGCCGAAGTGCTGGCCCTTaGGTTTTAAGTCGCCATTCTTGGAGAACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LNQDLSCRSAGP*VLSRHSWRTAL
Trigger: GAGAGCAGTTCTCCAAGAATGGCGACTTAAAACCAAAGGGCCAGCACTTCGGCAGGATAGATCTTGGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAAAGGCTTTTCCACACTaGCCCAACACGGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSKAFPH*PNTENC
Trigger: GCAGTTTTCCGTGTTGGGTCAGTGTGGAAAAGCCTT...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGGCTTCTTGCCGTCTGTGTCTCATTTGATGCTCTGAACCAAGATCTATCCTGCAAGGCTTTTCCACACTaGCCCAACACGGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: WLLAVCVSFDALNQDLSCKAFPH*PNTENC
Trigger: GCAGTTTTCCGTGTTGGGTCAGTGTGGAAAAGCCTT...GCAGGATAGATCTTGGTTCAGAGCATCAAATGAGACACAGACGGCAAGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTGACCTGAGAGTCCAGTaGAGGCTTTTCCGCATTCTT +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCDLRVQ*RLFRIL
Trigger: AAGAATGCGGAAAAGCCTTCACTGGACTCTCAGGTC...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGGCTTCTCCCTCGTGTaGGTTTTTCCATGCTCATTC +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHGFSLV*VFPCSF
Trigger: GAATGAGCATGGAAAAACTCACACGAGGGAGAAGCC...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTGTGCACGATAAGGTGTaGGGATGTGGTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLVHDKV*GCGEGL
Trigger: AAGGCCTTCACCACATCCTCACACCTTATCGTGCAC...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACCCATGTTTATGCAGGTaGGAGGAGGCACGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNPCLCR*EEARKA
Trigger: AGCCTTCCGTGCCTCCTCTCACCTGCATAAACATGG...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCACCCTGGTGTTTTATCTaGAGGGATCAGGTATGGGAG +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSPWCFI*RDQVWE
Trigger: CTCCCATACCTGATCCCTTCAGATAAAACACCAGGG...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCCCCTGGTGTTTTATCTaGAGGGATCAGGTATGGGAG +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFPWCFI*RDQVWE
Trigger: CTCCCATACCTGATCCCTTCAGATAAAACACCAGGG...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTGAGTTGCATAGGCAGTaGGTGGATTCGCATACGCAG +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLELHRQ*VDSHTQ
Trigger: CTGCGTATGCGAATCCACTCACTGCCTATGCAACTC...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCTAAGTCACAAGTGGTaGCTCACCTCACAACAGCCT +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFLSHKW*LTSQQP
Trigger: AGGCTGTTGTGAGGTGAGTCACCACTTGTGACTTAG...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTTGGCCAGGATGGTCTTaGTCTCCTGACCTTGTGATC +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLWPGWS*SPDLVI
Trigger: GATCACAAGGTCAGGAGATCAAGACCATCCTGGCCA...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCGGAGGCAAGTTCTATTaGAACCATGTGGGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFGGKFY*NHVGRA
Trigger: AGCACGACCCACATGGTTTCAATAGAACTTGCCTCC...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGTGGCCAGGATGGTCATaGTCTCCTGACCTTGTGATC +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVWPGWS*SPDLVI
Trigger: GATCACAAGGTCAGGAGATCATGACCATCCTGGCCA...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAAACCAAGATCTATCCTaGCGAAGTGCTGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSNQDLS*RSAGPL
Trigger: CAAAGGGCCAGCACTTCGGCAGGATAGATCTTGGTT...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TTCTGTCCAGGGTCTGTTTGGACGTGTTTAGAAAGACCTGAGAGTCCAGTGAAGAACCAAGATCTATCCTaGCGAAGTGCTGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: FCPGSVWTCLERPESPVKNQDLS*RSAGPL
Trigger: CAAAGGGCCAGCACTTCGGCAGGATAGATCTTGGTT...CTTCACTGGACTCTCAGGTCTTTCTAAACACGTCCAAACAGACCCTGGACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR GCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATAACCAAGATCTATCCTaGCGAAGTGCTGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHNQDLS*RSAGPL
Trigger: CAAAGGGCCAGCACTTCGGCAGGATAGATCTTGGTT...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCCTTCTCCACACTGCGTaGGGTCACAGAGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVLLHTA*GHRAAL
Trigger: GAGGGCAGCTCTGTGACCGCACGCAGTGTGGAGAAG...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCGAGATCTGTCCCGAGTaGATGCTTGCTGGGAAACAA +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFEICPE*MLAGKQ
Trigger: TTGTTTCCCAGCAAGCATGCACTCGGGACAGATCTC...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGACACTTCCCCACAGCTaGTGTAGTCAAGAGATCTGT +
Preference number: 4 (lower is better)
Translates to: DADCLATFLKSWTSGERETLPHS*CSQEIC
Trigger: ACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGT...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGGGATTCCTGACGGCATaGATTTCAACAGGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTGFLTA*ISTGVA
Trigger: CGCCACACCTGTTGAAATGCATGCCGTCAGGAATCC...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTCCGCAAACCACACATaGAAAGGGCTTCTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTSANHT*KGLLPR
Trigger: ACGAGGGAGAAGCCCTTTGCATGTGTGGTTTGCGGA...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATTCACCCGTCCGGCACTaGCTAAGGTACAGGAATTCC +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNSPVRH*LRYRNS
Trigger: GGAATTCCTGTACCTTAGGCAGTGCCGGACGGGTGA...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATCAGTCACCAAGCAGCTaGTGCCCTGATGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNQSPSS*CPDGHK
Trigger: TTTGTGGCCATCAGGGCAGCAGCTGCTTGGTGACTG...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGAGGTTCTGAAGAAGTaGGTGAAGTCACCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHEVLKK*VKSPPV
Trigger: CACTGGAGGTGACTTCACGCACTTCTTCAGAACCTC...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTTTCAAGCAATTCTCCTaGCTCAGCCTCCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLFKQFS*LSLPRS
Trigger: GCTCCTTGGGAGGCTGAGGCAGGAGAATTGCTTGAA...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCCCTAGTGGGTGCTGGTaGCAAGCTTCTGGGACCCTC +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVPSGCW*QASGTL
Trigger: GAGGGTCCCAGAAGCTTGGCACCAGCACCCACTAGG...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTGCAATCTCAGCTCACTaGATGCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIAISAH*MLCLPG
Trigger: ACCCGGGAGGCAGAGCATGCAGTGAGCTGAGATTGC...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGTCAGAACTTGAAAAATaGTCCTACATTTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCESELEK*SYISCW
Trigger: CCAACAGGAAATGTAGGAGCATTTTTCAAGTTCTGA...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTTTAAGTCGCCATTCTTaGAGAACTGCTCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCLSRHS*RTALRP
Trigger: AGGGCGGAGAGCAGTTCTCCAAGAATGGCGACTTAA...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306502.6
ENST00000433976.7
CDS-3UTR CCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGCATTCCCTACATACGTaGGGATTCCTGACGGCATGC +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVHSLHT*GFLTAC
Trigger: GCATGCCGTCAGGAATCCCCACGTATGTAGGGAATG...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGGTTTCTCACCGGTGTaGGTTCTTATGTGCACGATA +
Preference number: 4 (lower is better)
Translates to: DADCLATFLKSWTSGEREGFSPV*VLMCTI
Trigger: TATCGTGCACATAAGAACCCACACCGGTGAGAAACC...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTGACCCACAAGTTCTaGACTCAGGCAACTGTGAGT +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHVTHKF*TQATVS
Trigger: ACTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCAC...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGCATATCAGGCAGGGTaGTGTCTGGGCTACCGCCTG +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVAYQAG*CLGYRL
Trigger: CAGGCGGTAGCCCAGACACCACCCTGCCTGATATGC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATAGTAAGGAGATGAGATaGAAAGCTGCAGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHSKEMR*KAAAEE
Trigger: CTCCTCCGCTGCAGCTTTCCATCTCATCTCCTTACT...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGACCCGAGGGACGGCTTaGCTTTATCACAACCATGCT +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTTRGTA*LYHNHA
Trigger: AGCATGGTTGTGATAAAGCCAAGCCGTCCCTCGGGT...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACTCTAGTGCCTCATCCTaGGCTGACTTCAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNSSASS*ADFREE
Trigger: CTCCTCCCTGAAGTCAGCCCAGGATGAGGCACTAGA...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAAGAATCCCTGGGCTaGGTAAGACCTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFQESLG*VRPCHR
Trigger: TCTGTGACAAGGTCTTACCCAGCCCAGGGATTCTTG...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGCCCCCGGCCTGGGCTTaGTTTTCTTTAGGTTTATCC +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVPPAWA*FSLGLS
Trigger: GGATAAACCTAAAGAAAACCAAGCCCAGGCCGGGGG...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACCAGGTGATGTCCTACTaGGGCCAGGTTCTCGTAGTT +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNQVMSY*GQVLVV
Trigger: AACTACGAGAACCTGGCCTCAGTAGGACATCACCTG...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306502.6
ENST00000433976.7
CDS-3UTR TCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCCTGTCTCCTGTATTTTaGGTTCTCACGTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFLSPVF*VLTCVL
Trigger: CAGCACACACGTGAGAACTCAAAATACAGGAGACAG...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATCTGTCTCCTGTATTTTaGGTTCTCACGTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHLSPVF*VLTCVL
Trigger: CAGCACACACGTGAGAACTCAAAATACAGGAGACAG...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCACTGTCTCCTGTATTTTaGGTTCTCACGTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSLSPVF*VLTCVL
Trigger: CAGCACACACGTGAGAACTCAAAATACAGGAGACAG...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTAAGGCTTTTCCACACTaGCCCAACACGGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLKAFPH*PNTENC
Trigger: GCAGTTTTCCGTGTTGGGTCAGTGTGGAAAAGCCTT...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTATACGTGGGGATTCCTaGCGGCATGCATTTCAACAG +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLIRGDS*RHAFQQ
Trigger: CTGTTGAAATGCATGCCGTCAGGAATCCCCACGTAT...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGGACCTGAGAGTCCAGTaGAGGCTTTTCCGCATTCTT +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTDLRVQ*RLFRIL
Trigger: AAGAATGCGGAAAAGCCTTCACTGGACTCTCAGGTC...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTGTGTTTAGTGAGGCCTaGGCGCCCTGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAVFSEA*APCEGF
Trigger: AAAGCCTTCACAGGGCGCTCAGGCCTCACTAAACAC...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTCCATGTTTATGCAGGTaGGAGGAGGCACGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIPCLCR*EEARKA
Trigger: AGCCTTCCGTGCCTCCTCTCACCTGCATAAACATGG...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTTGTGATGAGATGCTaGTTGCCTAGCCACATTCCT +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHVVMRC*LPSHIP
Trigger: AGGAATGTGGCTAGGCAATCAGCATCTCATCACAAC...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCGTTGTGATGAGATGCTaGTTGCCTAGCCACATTCCT +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFVVMRC*LPSHIP
Trigger: AGGAATGTGGCTAGGCAATCAGCATCTCATCACAAC...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATTGTGTCTGTTCTTCATaGAGGCAGACTGAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHCVCSS*RQTESL
Trigger: TAGGGACTCAGTCTGCCTTCATGAAGAACAGACACA...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTGTCTGTTCTTCATaGAGGCAGACTGAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSCVCSS*RQTESL
Trigger: TAGGGACTCAGTCTGCCTTCATGAAGAACAGACACA...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCTCATGCCTAAGAGCATaGCTAACCAACCAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFSCLRA*LTNQSL
Trigger: TAGGCTCTGGTTGGTTAGTCATGCTCTTAGGCATGA...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGTTCGTGTCACTCACATaGAGTCTTGCTCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVFVSLT*SLALPL
Trigger: CAGTGGCAGAGCAAGACTTCATGTGAGTGACACGAA...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGGGTAGTCGTCTTAATTaGGGTCTGTGCTGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVGSRLN*GLCWGD
Trigger: ATCACCCCAGCACAGACCTCAATTAAGACGACTACC...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CAATGCCAACAATTAAAGGTGGCAACAGATGAGCTAAATAGCCACACTCAATCCCATGGGCATCGCTGCTaGGGAGGTTCTGAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: QCQQLKVATDELNSHTQSHGHRC*GGSEEV
Trigger: CACTTCTTCAGAACCTCCTCAGCAGCGATGCCCATG...GGATTGAGTGTGGCTATTTAGCTCATCTGTTGCCACCTTTAATTGTTGGCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATAAGGGAGTAAGGAGATaGGATGGAAAGCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNKGVRR*DGKLQR
Trigger: CCGCTGCAGCTTTCCATCTCATCTCCTTACTCCCTT...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTAGAAGAGGCTCTGTGTaGAGCCAAGTCAAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLRRGSV*SQVKGV
Trigger: TACTCCCTTGACTTGGCTTCACACAGAGCCTCTTCT...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAAGTACTTGCAACAGTTaGGTTGCATACGCAGTGCGA +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSSTCNS*VAYAVR
Trigger: TCGCACTGCGTATGCAACTCAACTGTTGCAAGTACT...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTAAAGCTTCTCCACACTaGGTGCGGTCACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAKASPH*VRSQSC
Trigger: GCAGCTCTGTGACCGCACGCAGTGTGGAGAAGCTTT...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTTCCCGAGTGCATGCTTaGTGGGAAACAACATTTGGA +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCSRVHA*WETTFG
Trigger: TCCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGA...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCTCCCGAGTGCATGCTTaGTGGGAAACAACATTTGGA +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFSRVHA*WETTFG
Trigger: TCCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGA...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGGATTCCTGACGGCATaGATTTCAACAGGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNGFLTA*ISTGVA
Trigger: CGCCACACCTGTTGAAATGCATGCCGTCAGGAATCC...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACTCCGCAAACCACACATaGAAAGGGCTTCTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNSANHT*KGLLPR
Trigger: ACGAGGGAGAAGCCCTTTGCATGTGTGGTTTGCGGA...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAGTATGGATTCTCGCGTaGTCAGTCAGGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSVWILA*SVRLEE
Trigger: TTCTTCAAGCCTGACTGAGCACGCGAGAATCCATAC...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACTTTCTCTGTGTCTGCTaGATAGGGCTCCAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNFLCVC*IGLQGE
Trigger: CTCACCCTGGAGCCCTATGCAGCAGACACAGAGAAA...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTATAACCCAGGATTGCTaGAGCCAGAGGACACACATT +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFITQDC*SQRTHI
Trigger: AATGTGTGTCCTCTGGCTGCAGCAATCCTGGGTTAT...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATATAACCCAGGATTGCTaGAGCCAGAGGACACACATT +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHITQDC*SQRTHI
Trigger: AATGTGTGTCCTCTGGCTGCAGCAATCCTGGGTTAT...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCCCTACAGGCAAGGGGTaGAGGGCTGTGGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVPTGKG*RAVGFG
Trigger: ACCAAAACCCACAGCCCTGCACCCCTTGCCTGTAGG...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATTGGTTCAGCAGGCTGTaGAAGCATAGCACTGGCATC +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNWFSRL*KHSTGI
Trigger: GATGCCAGTGCTATGCTTGCACAGCCTGCTGAACCA...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATGATTTGTATATGCAGTaGATGTTTCCAGCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHDLYMQ*MFPASC
Trigger: ACAACTTGCTGGAAACATGCACTGCATATACAAATC...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATTCAGAACTTGAAAAATaGTCCTACATTTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHSELEK*SYISCW
Trigger: CCAACAGGAAATGTAGGAGCATTTTTCAAGTTCTGA...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGGCTTCTTGCCGTCTGTGTCTCATTTGATGCTCTGAACCAAGATCTATCCTGCGCCAATAGATCACACTaGGTTGGAACAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: WLLAVCVSFDALNQDLSCANRSH*VGTGDV
Trigger: GACATCACCTGTTCCAACCCAGTGTGATCTATTGGC...GCAGGATAGATCTTGGTTCAGAGCATCAAATGAGACACAGACGGCAAGAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTGCATTTCAACAGGTGTaGCGCAGCCCATGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAAFQQV*RSPWSE
Trigger: CTCACTCCATGGGCTGCGCCACACCTGTTGAAATGC...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATCATTCCCTACATACGTaGGGATTCCTGACGGCATGC +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNHSLHT*GFLTAC
Trigger: GCATGCCGTCAGGAATCCCCACGTATGTAGGGAATG...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TTCTGTCCAGGGTCTGTTTGGACGTGTTTAGAAAGACCTGAGAGTCCAGTGAAGCATGTTGAGTTAGGCTaGAAGAAACAGGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: FCPGSVWTCLERPESPVKHVELG*KKQGRL
Trigger: AAGCCTCCCCTGTTTCTTCCAGCCTAACTCAACATG...CTTCACTGGACTCTCAGGTCTTTCTAAACACGTCCAAACAGACCCTGGACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGGTTTCTCACCGGTGTaGGTTCTTATGTGCACGATA +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHGFSPV*VLMCTI
Trigger: TATCGTGCACATAAGAACCCACACCGGTGAGAAACC...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCACCTGGTCTGTTTTCATaGTACACAAAGGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSPGLFS*YTKEQH
Trigger: GTGCTGCTCCTTTGTGTACCATGAAAACAGACCAGG...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCGGAACCCTCAGACATTaGGAGTGGAGATTTTCACAC +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFGTLRH*EWRFSH
Trigger: GTGTGAAAATCTCCACTCCCAATGTCTGAGGGTTCC...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAGGAACCCTCAGACATTaGGAGTGGAGATTTTCACAC +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSGTLRH*EWRFSH
Trigger: GTGTGAAAATCTCCACTCCCAATGTCTGAGGGTTCC...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTGCCCAGGAGTCAACATaGCAGTTCCTACAGATAGTT +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFAQEST*QFLQIV
Trigger: AACTATCTGTAGGAACTGCCATGTTGACTCCTGGGC...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCGCCCAGGAGTCAACATaGCAGTTCCTACAGATAGTT +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFAQEST*QFLQIV
Trigger: AACTATCTGTAGGAACTGCCATGTTGACTCCTGGGC...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTGCCAGGGCAAGCGAATaGGAAAAACTAAACTTTCGG +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFARASE*EKLNFR
Trigger: CCGAAAGTTTAGTTTTTCCCATTCGCTTGCCCTGGC...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAGCCAGGGCAAGCGAATaGGAAAAACTAAACTTTCGG +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSARASE*EKLNFR
Trigger: CCGAAAGTTTAGTTTTTCCCATTCGCTTGCCCTGGC...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTCTTTTCCAGTCCTTCTaGAATGGTATTTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFLFQSF*NGILPL
Trigger: CAGTGGCAAAATACCATTCCAGAAGGACTGGAAAAG...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATCTCACTCTCCCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNLTLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCACCACTTTGGGAGAGTGAG...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATCTCATTTGATGCTCTaGACCAAGATCTATCCTGCC +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSSHLML*TKIYPA
Trigger: GGCAGGATAGATCTTGGTTCAGAGCATCAAATGAGA...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCGTCTGTGTCTCATTTaGTGCTCTGAACCAAGATCT +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCRLCLI*CSEPRS
Trigger: AGATCTTGGTTCAGAGCATCAAATGAGACACAGACG...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCACGTGCCTGAAGGTATaGCTGATTAAGGAACACTTC +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFTCLKV*LIKEHF
Trigger: GAAGTGTTCCTTAATCAGTCATACCTTCAGGCACGT...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACATACGTGGGGATTCCTaGCGGCATGCATTTCAACAG +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNIRGDS*RHAFQQ
Trigger: CTGTTGAAATGCATGCCGTCAGGAATCCCCACGTAT...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTGTGTTTAGAAAGACCTaGGAGTCCAGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCVFRKT*ESSEGF
Trigger: AAAGCCTTCACTGGACTCTCAGGTCTTTCTAAACAC...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTGTTTAGAAAGACCTaGGAGTCCAGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHVFRKT*ESSEGF
Trigger: AAAGCCTTCACTGGACTCTCAGGTCTTTCTAAACAC...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTCTGTCCAGGGTCTGTTTGGACGTGTTTAGAAAGACCTGAGAGTCCAGTGAAGGTGTTTAGAAAGACCTaGGAGTCCAGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FCPGSVWTCLERPESPVKVFRKT*ESSEGF
Trigger: AAAGCCTTCACTGGACTCTCAGGTCTTTCTAAACAC...CTTCACTGGACTCTCAGGTCTTTCTAAACACGTCCAAACAGACCCTGGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR TCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAGTGTTTAGAAAGACCTaGGAGTCCAGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSVFRKT*ESSEGF
Trigger: AAAGCCTTCACTGGACTCTCAGGTCTTTCTAAACAC...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATGGCTTCTCCCTCGTGTaGGTTTTTCCATGCTCATTC +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNGFSLV*VFPCSF
Trigger: GAATGAGCATGGAAAAACTCACACGAGGGAGAAGCC...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTTTCATGTCTTCAACGTaGATGAGTGTAGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCFMSST*MSVADS
Trigger: GCTGTCAGCTACACTCATTCACGTTGAAGACATGAA...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGGTTGTGATGAGATGCTaGTTGCCTAGCCACATTCCT +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVVVMRC*LPSHIP
Trigger: AGGAATGTGGCTAGGCAATCAGCATCTCATCACAAC...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATCTGCAGGGCAGCTTGTaGATCTATGTGGAAGGTACA +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNLQGSL*IYVEGT
Trigger: TGTACCTTCCACATAGATTCACAAGCTGCCCTGCAG...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGGACTCAGGCAACTGTaGGTCAGTTCTAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QFSIMLGVLVCLCCYISEGLRQL*VSSSRD
Trigger: GTCTCTGCTAGAACTGACTCACAGTTGCCTGAGTCC...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTAAGGGAGTAAGGAGATaGGATGGAAAGCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAKGVRR*DGKLQR
Trigger: CCGCTGCAGCTTTCCATCTCATCTCCTTACTCCCTT...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTACACAGAACACGTTCTaGGAGTTAGGAAGAGAAATA +
Preference number: 4 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFTQNTF*ELGREI
Trigger: TATTTCTCTTCCTAACTCTCAGAACGTGTTCTGTGT...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTTATTTTATCTTACTCTaGGGAACCCTCAGACATTGG +
Preference number: 4 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFYFILL*GTLRHW
Trigger: CCAATGTCTGAGGGTTCCTCAGAGTAAGATAAAATA...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGACTCGTCAAGGTGAGTaGGTGACACACACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: QFSIMLGVLVCLCCYISETRQGE*VTHTGS
Trigger: GGAACCTGTGTGTGTCACTCACTCACCTTGACGAGT...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTATGGTCTTGATCTCCTaGCCTTGTGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAMVLIS*PCDPPT
Trigger: GGTGGGTGGATCACAAGGTCAGGAGATCAAGACCAT...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGGCTTCTTGCCGTCTGTGTCTCATTTGATGCTCTGAACCAAGATCTATCCTGCCTGGGTTGGAACAGGTaGTGTCCTGGTAACAATTTA +
Preference number: 4 (lower is better)
Translates to: WLLAVCVSFDALNQDLSCLGWNR*CPGNNL
Trigger: TAAATTGTTACCAGGACATCACCTGTTCCAACCCAG...GCAGGATAGATCTTGGTTCAGAGCATCAAATGAGACACAGACGGCAAGAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR GCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTCCCGAGTGCATGCTTaGTGGGAAACAACATTTGGA +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTSRVHA*WETTFG
Trigger: TCCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGA...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATGAGATCTGTCCCGAGTaGATGCTTGCTGGGAAACAA +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNEICPE*MLAGKQ
Trigger: TTGTTTCCCAGCAAGCATGCACTCGGGACAGATCTC...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGACACTTCCCCACAGCTaGTGTAGTCAAGAGATCTGT +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVTLPHS*CSQEIC
Trigger: ACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGT...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGGCTTTCTCTGTGTCTaGTGCATAGGGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVGFLCV*CIGLQG
Trigger: ACCCTGGAGCCCTATGCAGCAGACACAGAGAAAGCC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGCAGAACAGCAACAATaGTGCTGCATATCACACATC +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHAEQQQ*CCISHI
Trigger: GATGTGTGATATGCAGCAGCATTGTTGCTGTTCTGC...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGTGTAGAGCTGTGTTATaGCCCAACATTGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVCRAVL*PNIGQC
Trigger: ACACTGGCCAATGTTGGGGCATAACACAGCTCTACA...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCCAGTCACCAAGCAGCTaGTGCCCTGATGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVQSPSS*CPDGHK
Trigger: TTTGTGGCCATCAGGGCAGCAGCTGCTTGGTGACTG...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCGAGTTGATTTGTATATaGAGTGCATGTTTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRELICI*SACFQQ
Trigger: TTGCTGGAAACATGCACTGCATATACAAATCAACTC...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGCTTGTCACAGACATGTaGTTAGGTAGAGAGACTATG +
Preference number: 4 (lower is better)
Translates to: DADCLATFLKSWTSGERELVTDM*LGRETM
Trigger: CATAGTCTCTCTACCTAAGCACATGTCTGTGACAAG...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATAACACCCCAAGGAGATaGTGTTTCACAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHNTPRR*CFTTTL
Trigger: CAAAGTGGTTGTGAAACAGCATCTCCTTGGGGTGTT...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTGCCAATAGATCACACTaGGTTGGAACAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLANRSH*VGTGDV
Trigger: GACATCACCTGTTCCAACCCAGTGTGATCTATTGGC...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306502.6
ENST00000433976.7
CDS-3UTR CCA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGCTGGGAAACAACATTTaGAGTAGAGCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: DADCLATFLKSWTSGERELGNNI*SRAEGF
Trigger: AAAGCCTTCAGCTCTACTCCAAATGTTGTTTCCCAG...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CAATGCCAACAATTAAAGGTGGCAACAGATGAGCTAAATAGCCACACTCAATCCCATTCCCTACATACGTaGGGATTCCTGACGGCATGC +
Preference number: 4 (lower is better)
Translates to: QCQQLKVATDELNSHTQSHSLHT*GFLTAC
Trigger: GCATGCCGTCAGGAATCCCCACGTATGTAGGGAATG...GGATTGAGTGTGGCTATTTAGCTCATCTGTTGCCACCTTTAATTGTTGGCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCATGTTGAGTTAGGCTaGAAGAAACAGGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLHVELG*KKQGRL
Trigger: AAGCCTCCCCTGTTTCTTCCAGCCTAACTCAACATG...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTTGTCCAGGGTCTGTTTaGACGTGTTTAGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFCPGSV*TCLERP
Trigger: AGGTCTTTCTAAACACGTCCAAACAGACCCTGGACA...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCACATTCCTCAAGTCATaGACATCTGGAGAACGAGAG +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFTFLKS*TSGERE
Trigger: CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCCTCCTGACCCACGGATaGCTGGATCCCTATTTCCAG +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVLLTHG*LDPYFQ
Trigger: CTGGAAATAGGGATCCAGCCATCCGTGGGTCAGGAG...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACAGTAAGGAGATGAGATaGAAAGCTGCAGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNSKEMR*KAAAEE
Trigger: CTCCTCCGCTGCAGCTTTCCATCTCATCTCCTTACT...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTAGGGAGGAGAAATACTaGCTTGGTGTGGTAGTTAGA +
Preference number: 4 (lower is better)
Translates to: DCLATFLKSWTSGEREVFREEKY*LGVVVR
Trigger: TCTAACTACCACACCAAGCCAGTATTTCTCCTCCCT...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CAATGCCAACAATTAAAGGTGGCAACAGATGAGCTAAATAGCCACACTCAATCCCTCACTCTCCCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: QCQQLKVATDELNSHTQSLTLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCACCACTTTGGGAGAGTGAG...GGATTGAGTGTGGCTATTTAGCTCATCTGTTGCCACCTTTAATTGTTGGCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGACGTGCCTGAAGGTATaGCTGATTAAGGAACACTTC +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTTCLKV*LIKEHF
Trigger: GAAGTGTTCCTTAATCAGTCATACCTTCAGGCACGT...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTATACGTGGGGATTCCTaGCGGCATGCATTTCAACAG +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAIRGDS*RHAFQQ
Trigger: CTGTTGAAATGCATGCCGTCAGGAATCCCCACGTAT...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGTGCACGATAAGGTGTaGGGATGTGGTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVVHDKV*GCGEGL
Trigger: AAGGCCTTCACCACATCCTCACACCTTATCGTGCAC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTGGTTTCTGCCCAGTGTaGATTCTTCCATGTTTATGC +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLGFCPV*ILPCLC
Trigger: GCATAAACATGGAAGAATTCACACTGGGCAGAAACC...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATGTGAATGAGTGTAGCTaGCAGCTTCCCCACATTCTT +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNVNECS*QLPHIL
Trigger: AAGAATGTGGGGAAGCTGTCAGCTACACTCATTCAC...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATGAGTGTAGCTaGCAGCTTCCCCACATTCTT +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNVNECS*QLPHIL
Trigger: AAGAATGTGGGGAAGCTGTCAGCTACACTCATTCAC...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTTTCATGTCTTCAACGTaGATGAGTGTAGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLFMSST*MSVADS
Trigger: GCTGTCAGCTACACTCATTCACGTTGAAGACATGAA...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACTCATGCCTAAGAGCATaGCTAACCAACCAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNSCLRA*LTNQSL
Trigger: TAGGCTCTGGTTGGTTAGTCATGCTCTTAGGCATGA...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGTTCGTGTCACTCACATaGAGTCTTGCTCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: QFSIMLGVLVCLCCYISEFVSLT*SLALPL
Trigger: CAGTGGCAGAGCAAGACTTCATGTGAGTGACACGAA...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGAAACCAATCCAGGCTTaGCACAGCAAGAATGAATGG +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTKPIQA*HSKNEW
Trigger: CCATTCATTCTTGCTGTGTCAAGCCTGGATTGGTTT...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAGCAAGACCCCAGGATaGAAATGTACCCTAACAAAA +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFSKTPG*KCTLTK
Trigger: TTTTGTTAGGGTACATTTTCATCCTGGGGTCTTGCT...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CAATGCCAACAATTAAAGGTGGCAACAGATGAGCTAAATAGCCACACTCAATCCCTAAGTCACAAGTGGTaGCTCACCTCACAACAGCCT +
Preference number: 4 (lower is better)
Translates to: QCQQLKVATDELNSHTQSLSHKW*LTSQQP
Trigger: AGGCTGTTGTGAGGTGAGTCACCACTTGTGACTTAG...GGATTGAGTGTGGCTATTTAGCTCATCTGTTGCCACCTTTAATTGTTGGCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCATGGTCTTGATCTCCTaGCCTTGTGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVMVLIS*PCDPPT
Trigger: GGTGGGTGGATCACAAGGTCAGGAGATCAAGACCAT...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATTCGTGCTTTCCATGTTaGTTCTGTCTTAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHSCFPC*FCLKAY
Trigger: GTAGGCTTTAAGACAGAATCAACATGGAAAGCACGA...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTAAGTCGCCATTCTACTaGGGCCAGGTTCTCGTAGTT +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAKSPFY*GQVLVV
Trigger: AACTACGAGAACCTGGCCTCAGTAGAATGGCGACTT...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620195.4
CDS-3UTR GCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCACCCAACACGGAAAACTaGTCTCCAATTTTGAACAAG +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSPNTEN*SPILNK
Trigger: CTTGTTCAAAATTGGAGAGCAGTTTTCCGTGTTGGG...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGGCTTCTTGCCGTCTGTGTCTCATTTGATGCTCTGAACCAAGATCTATCCTGCCCCAACACGGAAAACTaGTCTCCAATTTTGAACAAG +
Preference number: 4 (lower is better)
Translates to: WLLAVCVSFDALNQDLSCPNTEN*SPILNK
Trigger: CTTGTTCAAAATTGGAGAGCAGTTTTCCGTGTTGGG...GCAGGATAGATCTTGGTTCAGAGCATCAAATGAGACACAGACGGCAAGAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR GCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTATGGATTCTCGCGTaGTCAGTCAGGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNVWILA*SVRLEE
Trigger: TTCTTCAAGCCTGACTGAGCACGCGAGAATCCATAC...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGACACAGGGAAGCGACTaGTATCTTCCATACATTCAC +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVTQGSD*YLPYIH
Trigger: GTGAATGTATGGAAGATAGCAGTCGCTTCCCTGTGT...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGCATGAAGTCTTGCTCTaGCACTGTGTGTGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTHEVLL*HCVCLR
Trigger: CCTTAAACACACACAGTGGCAGAGCAAGACTTCATG...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACCATGTTGAGTTAGGCTaGAAGAAACAGGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNHVELG*KKQGRL
Trigger: AAGCCTCCCCTGTTTCTTCCAGCCTAACTCAACATG...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGGTTTCTCACCGGTGTaGGTTCTTATGTGCACGATA +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNGFSPV*VLMCTI
Trigger: TATCGTGCACATAAGAACCCACACCGGTGAGAAACC...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAAGTCATGGACATCTaGAGAACGAGAGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLQVMDI*RTRGLS
Trigger: TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTG...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAGCTTGTGAATCTATGTaGAAGGTACAGTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSACESM*KVQSPF
Trigger: GAATGGAGACTGTACCTTCCACATAGATTCACAAGC...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTGTGAAGAGGATCTaGAGGTCAACAAGGACACTC +
Preference number: 4 (lower is better)
Translates to: QFSIMLGVLVCLCCYISEAVKRI*RSTRTL
Trigger: GAGTGTCCTTGTTGACCTCCAGATCCTCTTCACAGC...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCACCCGAGGGACGGCTTaGCTTTATCACAACCATGCT +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVTRGTA*LYHNHA
Trigger: AGCATGGTTGTGATAAAGCCAAGCCGTCCCTCGGGT...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGAGAAAGAGGCTTATTTaGCTCATGGTTCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTRKRLI*LMVQQA
Trigger: AGCCTGCTGAACCATGAGCCAAATAAGCCTCTTTCT...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGAGGGAGGAGAAATACTaGCTTGGTGTGGTAGTTAGA +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTREEKY*LGVVVR
Trigger: TCTAACTACCACACCAAGCCAGTATTTCTCCTCCCT...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCCACAGGTTCCTGACATaGAAAGTTTATCACTCACAG +
Preference number: 4 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFHRFLT*KVYHSQ
Trigger: CTGTGAGTGATAAACTTTCCATGTCAGGAACCTGTG...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATTCTATTGAAACCATGTaGGTCGTGCTTTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: CLATFLKSWTSGEREVFHSIETM*VVLSML
Trigger: CAACATGGAAAGCACGACCCACATGGTTTCAATAGA...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGACCTGAGAGTCCAGTaGAGGCTTTTCCGCATTCTT +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVDLRVQ*RLFRIL
Trigger: AAGAATGCGGAAAAGCCTTCACTGGACTCTCAGGTC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATGGTTTCTGCCCAGTGTaGATTCTTCCATGTTTATGC +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNGFCPV*ILPCLC
Trigger: GCATAAACATGGAAGAATTCACACTGGGCAGAAACC...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCCTGCAGGGCAGCTTGTaGATCTATGTGGAAGGTACA +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVLQGSL*IYVEGT
Trigger: TGTACCTTCCACATAGATTCACAAGCTGCCCTGCAG...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGACCTTAGAGAACACTaGGGGCTTTCTCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVDLREH*GLSLCL
Trigger: CAGACACAGAGAAAGCCCTCAGTGTTCTCTAAGGTC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTCCTCACTCCAAGAATaGTCAGTGCAGCATCATAAA +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTSSLQE*SVQHHK
Trigger: TTTATGATGCTGCACTGATCATTCTTGGAGTGAGGA...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGCTGTGGGTTTTGGTTaGGATTACACCAGGATCACG +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVAVGFG*DYTRIT
Trigger: CGTGATCCTGGTGTAATCTCAACCAAAACCCACAGC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATATAAGTTGCCCTAAGTaGCACAGAACACGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNISCPK*HRTRSE
Trigger: CTCAGAACGTGTTCTGTGTCACTTAGGGCAACTTAT...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTGTTGCATATGCAGTATaGGTTGAGTTGCGTTGCATA +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLVAYAV*VELRCI
Trigger: TATGCAACGCAACTCAACTCATACTGCATATGCAAC...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTAGTACTTGCAACAGTTaGGTTGCATACGCAGTGCGA +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEASTCNS*VAYAVR
Trigger: TCGCACTGCGTATGCAACTCAACTGTTGCAAGTACT...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGCCCAACACGGAAAACTaGTCTCCAATTTTGAACAAG +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVPNTEN*SPILNK
Trigger: CTTGTTCAAAATTGGAGAGCAGTTTTCCGTGTTGGG...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTGTATGGATTCTCGCGTaGTCAGTCAGGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIVWILA*SVRLEE
Trigger: TTCTTCAAGCCTGACTGAGCACGCGAGAATCCATAC...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCACAGCAACAATGCTGCTaGATATCACACATCAATAGA +
Preference number: 4 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSQQQCC*ISHINR
Trigger: TCTATTGATGTGTGATATGCAGCAGCATTGTTGCTG...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGTGTAGAGCTGTGTTATaGCCCAACATTGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QFSIMLGVLVCLCCYISECRAVL*PNIGQC
Trigger: ACACTGGCCAATGTTGGGGCATAACACAGCTCTACA...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGAGGTTCTGAAGAAGTaGGTGAAGTCACCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVEVLKK*VKSPPV
Trigger: CACTGGAGGTGACTTCACGCACTTCTTCAGAACCTC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAGTAATGAAGAGAAGTaGAAACCAACACCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVSNEEK*KPTPQG
Trigger: TCCTTGGGGTGTTGGTTTGCACTTCTCTTCATTACT...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTGCCAATAGATCACACTaGGTTGGAACAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAANRSH*VGTGDV
Trigger: GACATCACCTGTTCCAACCCAGTGTGATCTATTGGC...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433976.7
CDS-3UTR CCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCTGGGAAACAACATTTaGAGTAGAGCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLLGNNI*SRAEGF
Trigger: AAAGCCTTCAGCTCTACTCCAAATGTTGTTTCCCAG...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACTGTCCAGGGTCTGTTTaGACGTGTTTAGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNCPGSV*TCLERP
Trigger: AGGTCTTTCTAAACACGTCCAAACAGACCCTGGACA...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATCAAGTCATGGACATCTaGAGAACGAGAGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNQVMDI*RTRGLS
Trigger: TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTG...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTCCACATCACAGCATATaGTATTACTCAAGAAAATCA +
Preference number: 4 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFPHHSI*YYSRKS
Trigger: TGATTTTCTTGAGTAATACCATATGCTGTGATGTGG...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGCTCAGACATTGGGAGTaGAGATTTTCACACAGGAGG +
Preference number: 4 (lower is better)
Translates to: QFSIMLGVLVCLCCYISELRHWE*RFSHRR
Trigger: CCTCCTGTGTGAAAATCTCCACTCCCAATGTCTGAG...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTGCATCATCACAAAAGTaGAAACAGGTGAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCASSQK*KQVKWK
Trigger: TTTCCACTTCACCTGTTTCCACTTTTGTGATGATGC...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGTCTCATTTGATGCTCTaGACCAAGATCTATCCTGCC +
Preference number: 4 (lower is better)
Translates to: QFSIMLGVLVCLCCYISESHLML*TKIYPA
Trigger: GGCAGGATAGATCTTGGTTCAGAGCATCAAATGAGA...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CAATGCCAACAATTAAAGGTGGCAACAGATGAGCTAAATAGCCACACTCAATCCACGTGCCTGAAGGTATaGCTGATTAAGGAACACTTC +
Preference number: 4 (lower is better)
Translates to: QCQQLKVATDELNSHTQSTCLKV*LIKEHF
Trigger: GAAGTGTTCCTTAATCAGTCATACCTTCAGGCACGT...GGATTGAGTGTGGCTATTTAGCTCATCTGTTGCCACCTTTAATTGTTGGCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGGTTTCTGCCCAGTGTaGATTCTTCCATGTTTATGC +
Preference number: 4 (lower is better)
Translates to: QFSIMLGVLVCLCCYISEGFCPV*ILPCLC
Trigger: GCATAAACATGGAAGAATTCACACTGGGCAGAAACC...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CAATGCCAACAATTAAAGGTGGCAACAGATGAGCTAAATAGCCACACTCAATCCGGATCATCAAAGTACTaGGCAGAACAGCAACAATGC +
Preference number: 4 (lower is better)
Translates to: QCQQLKVATDELNSHTQSGSSKY*AEQQQC
Trigger: GCATTGTTGCTGTTCTGCTCAGTACTTTGATGATCC...GGATTGAGTGTGGCTATTTAGCTCATCTGTTGCCACCTTTAATTGTTGGCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGTCAAGAAAATCACTTTaGAATGTTGGGGGTCCAATG +
Preference number: 4 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVSRKSL*NVGGPM
Trigger: CATTGGACCCCCAACATTTCAAAGTGATTTTCTTGA...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTTCAAGAAAATCACTTTaGAATGTTGGGGGTCCAATG +
Preference number: 4 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLSRKSL*NVGGPM
Trigger: CATTGGACCCCCAACATTTCAAAGTGATTTTCTTGA...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTAAACCAATCCAGGCTTaGCACAGCAAGAATGAATGG +
Preference number: 4 (lower is better)
Translates to: FSIMLGVLVCLCCYISEAKPIQA*HSKNEW
Trigger: CCATTCATTCTTGCTGTGTCAAGCCTGGATTGGTTT...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATATATGCAGTATGAGTTaGGTTGCGTTGCATATGCAG +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNICSMS*VALHMQ
Trigger: CTGCATATGCAACGCAACTCAACTCATACTGCATAT...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACACACACACAGGTTCCTaGCATGGAAAGTTTATCACT +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNTHTGS*HGKFIT
Trigger: AGTGATAAACTTTCCATGTCAGGAACCTGTGTGTGT...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACAAAAGTGGAAACAGGTaGAGTGGAAACCACTGCAAT +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNKSGNR*SGNHCN
Trigger: ATTGCAGTGGTTTCCACTTCACCTGTTTCCACTTTT...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CAATGCCAACAATTAAAGGTGGCAACAGATGAGCTAAATAGCCACACTCAATCCGTTCTAGCAGAGACCTaGAGGACTTATTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: QCQQLKVATDELNSHTQSVLAET*RTYFSQ
Trigger: TTGGCTGAAATAAGTCCTGCAGGTCTCTGCTAGAAC...GGATTGAGTGTGGCTATTTAGCTCATCTGTTGCCACCTTTAATTGTTGGCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATTTAGTCTGTCTGTGTTaGTACATATCTGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNLVCLC*YISEAV
Trigger: CACAGCCTCAGATATGTAGCAACACAGACAGACTAA...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTCAGTATGAGTTGAGTTaGGTTGCATATGCAGTGCGA +
Preference number: 4 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIQYELS*VAYAVR
Trigger: TCGCACTGCATATGCAACGCAACTCAACTCATACTG...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACCTTGTCACAGACATGTaGTTAGGTAGAGAGACTATG +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNLVTDM*LGRETM
Trigger: CATAGTCTCTCTACCTAAGCACATGTCTGTGACAAG...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATCTGGGAAACAACATTTaGAGTAGAGCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNLGNNI*SRAEGF
Trigger: AAAGCCTTCAGCTCTACTCCAAATGTTGTTTCCCAG...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGTGTCCAGGGTCTGTTTaGACGTGTTTAGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: QFSIMLGVLVCLCCYISECPGSV*TCLERP
Trigger: AGGTCTTTCTAAACACGTCCAAACAGACCCTGGACA...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTACATTCCTCAAGTCATaGACATCTGGAGAACGAGAG +
Preference number: 4 (lower is better)
Translates to: YREQSPHSKNDQCSIIKITFLKS*TSGERE
Trigger: CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCCAGGGCTGTGGGTTTTaGTTGAGATTACACCAGGAT +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVQGCGF*LRLHQD
Trigger: ATCCTGGTGTAATCTCAACCAAAACCCACAGCCCTG...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGGATCATCAAAGTACTaGGCAGAACAGCAACAATGC +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVGSSKY*AEQQQC
Trigger: GCATTGTTGCTGTTCTGCTCAGTACTTTGATGATCC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACTATTTTATCTTACTCTaGGGAACCCTCAGACATTGG +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNYFILL*GTLRHW
Trigger: CCAATGTCTGAGGGTTCCTCAGAGTAAGATAAAATA...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp CAGTTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGAAAAGTGGAAACAGGTaGAGTGGAAACCACTGCAAT +
Preference number: 4 (lower is better)
Translates to: QFSIMLGVLVCLCCYISEKSGNR*SGNHCN
Trigger: ATTGCAGTGGTTTCCACTTCACCTGTTTCCACTTTT...CTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTCCCAACACGGAAAACTaGTCTCCAATTTTGAACAAG +
Preference number: 4 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIPNTEN*SPILNK
Trigger: CTTGTTCAAAATTGGAGAGCAGTTTTCCGTGTTGGG...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTTTAGTCTGTCTGTGTTaGTACATATCTGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: YREQSPHSKNDQCSIIKILVCLC*YISEAV
Trigger: CACAGCCTCAGATATGTAGCAACACAGACAGACTAA...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCAACACCCCAAGGAGATaGTGTTTCACAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVNTPRR*CFTTTL
Trigger: CAAAGTGGTTGTGAAACAGCATCTCCTTGGGGTGTT...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
3UTR CAA 72 bp ATAGGAGGCGGGCACCTCCTGGTGAAACAAAACATTTaGGTATCAATTATTGAGACTTCACAGACACTACTA +
Preference number: 4 (lower is better)
Translates to: IGGGHLLVKQNI*VSIIETSQTLL
Trigger: TAGTAGTGTCTGTGAAGTCTCAATAATTGATACCAAAATGTTTTGTTTCACCAGGAGGTGCCCGCCTCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR TCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGTTGCATATGCAGTATaGGTTGAGTTGCGTTGCATA +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVVAYAV*VELRCI
Trigger: TATGCAACGCAACTCAACTCATACTGCATATGCAAC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATGAGTTGATTTGTATATaGAGTGCATGTTTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNELICI*SACFQQ
Trigger: TTGCTGGAAACATGCACTGCATATACAAATCAACTC...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTATTTAAACCAGGTCTaGAGGCAATTCTTTGTATTG +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTYLNQV*RQFFVL
Trigger: CAATACAAAGAATTGCCTGCAGACCTGGTTTAAATA...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGCCACATCACAGCATATaGTATTACTCAAGAAAATCA +
Preference number: 4 (lower is better)
Translates to: HSSSHGHLENERSFMSSTPHHSI*YYSRKS
Trigger: TGATTTTCTTGAGTAATACCATATGCTGTGATGTGG...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACTATTTAAACCAGGTCTaGAGGCAATTCTTTGTATTG +
Preference number: 4 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNYLNQV*RQFFVL
Trigger: CAATACAAAGAATTGCCTGCAGACCTGGTTTAAATA...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGTTAGAAAAAGGAAGTaGCCGGAAATAAGTACTTGC +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVVRKRK*PEISTC
Trigger: GCAAGTACTTATTTCCGGCCACTTCCTTTTTCTAAC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGCATCATCACAAAAGTaGAAACAGGTGAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVASSQK*KQVKWK
Trigger: TTTCCACTTCACCTGTTTCCACTTTTGTGATGATGC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR GCA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCGATTTGTATATGCAGTaGATGTTTCCAGCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVDLYMQ*MFPASC
Trigger: ACAACTTGCTGGAAACATGCACTGCATATACAAATC...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS GCA 90 bp CTGACCCACGGATGGCTGGATCCCAGCTCCGCGGAATGGAAGCGCTaGCCGGGTCTACCGCGAGCGGCGGCGACTTTCCCTTCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: LTHGWLDPSSAEWKR*PGLPRAAATFPSGS
Trigger: GCTTCCAGAAGGGAAAGTCGCCGCCGCTCGCGGTAGACCCGGGCAGCGCTTCCATTCCGCGGAGCTGGGATCCAGCCATCCGTGGGTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564906.5
CDS GCA 90 bp ACGGATGGCTGGATCCCTATTTCCAGCTCCGCGGAATGGAAGCGCTaGCCGGGTCTACCGCGAGCGGCGGCGACTTTCCCTTCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: TDGWIPISSSAEWKR*PGLPRAAATFPSGS
Trigger: GCTTCCAGAAGGGAAAGTCGCCGCCGCTCGCGGTAGACCCGGGCAGCGCTTCCATTCCGCGGAGCTGGAAATAGGGATCCAGCCATCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS TCA 90 bp GGGCAGCTTGTGAATCTATGTGGAAGGTACAGTCTCCATTCCTCCTaGCCCACGGATGGCTGGATCCCAGCTCCGCGGAATGGAAGCGCT +
Preference number: 5 (lower is better)
Translates to: GQLVNLCGRYSLHSS*PTDGWIPAPRNGSA
Trigger: AGCGCTTCCATTCCGCGGAGCTGGGATCCAGCCATCCGTGGGTCAGGAGGAATGGAGACTGTACCTTCCACATAGATTCACAAGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564906.5
CDS-3UTR CAA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAACAGAGCTGCCCTCCATaGTGGCTTCTTGCCGTCTGT +
Preference number: 5 (lower is better)
Translates to: VFKGLIQEAPVTGPSATEQSCPP*WLLAVC
Trigger: ACAGACGGCAAGAAGCCACAATGGAGGGCAGCTCTG...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGTGTTATGCCCCAACATaGGCCAGTGTGGGACCCTAC +
Preference number: 5 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCECYAPT*ASVGPY
Trigger: GTAGGGTCCCACACTGGCCAATGTTGGGGCATAACA...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGCCACTCTGCCCCTCCTaGCACCCTGGTGTTTTATCT +
Preference number: 5 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVPLCPS*HPGVLS
Trigger: AGATAAAACACCAGGGTGCAAGGAGGGGCAGAGTGG...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTCGCCGTCCAGCCACGTaGCCCCTCACCTTCATGTTG +
Preference number: 5 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFRRPAT*PLTFML
Trigger: CAACATGAAGGTGAGGGGCAACGTGGCTGGACGGCG...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS TCA 90 bp GGGCAGCTTGTGAATCTATGTGGAAGGTACAGTCTCCATTCCTCCTaGCCCACGGATGGCTGGATCCCTATTTCCAGCTCCGCGGAATGG +
Preference number: 5 (lower is better)
Translates to: GQLVNLCGRYSLHSS*PTDGWIPISSSAEW
Trigger: CCATTCCGCGGAGCTGGAAATAGGGATCCAGCCATCCGTGGGTCAGGAGGAATGGAGACTGTACCTTCCACATAGATTCACAAGCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAAGCAGGGCTGTGGGTTTaGGTTGAGATTACACCAGGA +
Preference number: 5 (lower is better)
Translates to: VFKGLIQEAPVTGPSATEAGLWV*VEITPG
Trigger: TCCTGGTGTAATCTCAACCAAAACCCACAGCCCTGC...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGTGGCGTTTCACCATGTaGGCCAGGATGGTCTTGATC +
Preference number: 5 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEWRFTM*ARMVLI
Trigger: GATCAAGACCATCCTGGCCAACATGGTGAAACGCCA...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp ACGTGGGGATTCCTGACGGCATGCATTTCAACAGGTGTGGCGCAGCCCATGGAGATAGATCACACTGGGTaGGAACAGGTGATGTCCTGG +
Preference number: 5 (lower is better)
Translates to: TWGFLTACISTGVAQPMEIDHTG*EQVMSW
Trigger: CCAGGACATCACCTGTTCCAACCCAGTGTGATCTAT...CTCCATGGGCTGCGCCACACCTGTTGAAATGCATGCCGTCAGGAATCCCCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CAA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGCGAAGTGCTGGCCCTTaGGTTTTAAGTCGCCATTCT +
Preference number: 5 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCERSAGP*VLSRHS
Trigger: AGAATGGCGACTTAAAACCAAAGGGCCAGCACTTCG...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TACGCAGAACTGCTCATGTCTCTTCTCGGGCGAGGCTCGTCCACCTACAGAGTGCTGTCCAGGGTCTGTTaGGACGTGTTTAGAAAGACC +
Preference number: 5 (lower is better)
Translates to: YAELLMSLLGRGSSTYRVLSRVC*DVFRKT
Trigger: GGTCTTTCTAAACACGTCCAAACAGACCCTGGACAG...CACTCTGTAGGTGGACGAGCCTCGCCCGAGAAGAGACATGAGCAGTTCTGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGCACTCACATGAAGTCTaGCTCTGCCACTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCEHSHEV*LCHCVC
Trigger: ACACACACAGTGGCAGAGCAAGACTTCATGTGAGTG...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGAGGAGGCAAGTTCTATaGAAACCATGTGGGTCGTGC +
Preference number: 5 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCERRQVL*KPCGSC
Trigger: GCACGACCCACATGGTTTCAATAGAACTTGCCTCCT...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CAACAGGTGTGGCGCAGCCCATGGAGTGAGTTAGAGCTTTCCCACACGGCTTCCACTGTCTCCTGTATTTaGAGTTCTCACGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: QQVWRSPWSELELSHTASTVSCI*SSHVCA
Trigger: AGCACACACGTGAGAACTCAAAATACAGGAGACAGT...GGAAGCCGTGTGGGAAAGCTCTAACTCACTCCATGGGCTGCGCCACACCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CAA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGTTCCCCAGGGTGGACTaGCACGCGACCAGTAAGGTA +
Preference number: 5 (lower is better)
Translates to: DADCLATFLKSWTSGEREFPRVD*HATSKV
Trigger: TACCTTACTGGTCGCGTGCAAGTCCACCCTGGGGAA...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp GTGTTTAAGGGCCTCATCCAAGAAGCGCCAGTGACAGGGCCAAGCGCCACAGAAAAGTACTTGCAACAGTaGAGTTGCATACGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: VFKGLIQEAPVTGPSATEKYLQQ*SCIRSA
Trigger: CGCACTGCGTATGCAACTCAACTGTTGCAAGTACTT...TTCTGTGGCGCTTGGCCCTGTCACTGGCGCTTCTTGGATGAGGCCCTTAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGCGCCGTCCAGCCACGTaGCCCCTCACCTTCATGTTG +
Preference number: 5 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVRRPAT*PLTFML
Trigger: CAACATGAAGGTGAGGGGCAACGTGGCTGGACGGCG...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CTGTCCCGAGTGCATGCTTGCTGGGAAACAACATTTGGAGTAGAGCTGAAGGCTTTTAAGTCGCCATTCTaGGAGAACTGCTCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: LSRVHACWETTFGVELKAFKSPF*ENCSPP
Trigger: GGGCGGAGAGCAGTTCTCCAAGAATGGCGACTTAAA...AGCCTTCAGCTCTACTCCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CAA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCAGAGCTGCCCTCCATaGTGGCTTCTTGCCGTCTGT +
Preference number: 5 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCQSCPP*WLLAVC
Trigger: ACAGACGGCAAGAAGCCACAATGGAGGGCAGCTCTG...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATTCCCCAGGGTGGACTaGCACGCGACCAGTAAGGTA +
Preference number: 5 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSFPRVD*HATSKV
Trigger: TACCTTACTGGTCGCGTGCAAGTCCACCCTGGGGAA...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp GGAACACTTCCCCACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTTCTGTCCAGGGTCTGTTaGGACGTGTTTAGAAAGACC +
Preference number: 5 (lower is better)
Translates to: GTLPHSCCSQEICPECMLLSRVC*DVFRKT
Trigger: GGTCTTTCTAAACACGTCCAAACAGACCCTGGACAG...AAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CAA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATACTGTCTCCTGTATTTaGAGTTCTCACGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHTVSCI*SSHVCA
Trigger: AGCACACACGTGAGAACTCAAAATACAGGAGACAGT...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTTCCCCAGGGTGGACTaGCACGCGACCAGTAAGGTA +
Preference number: 5 (lower is better)
Translates to: HSSSHGHLENERSFMSSTFPRVD*HATSKV
Trigger: TACCTTACTGGTCGCGTGCAAGTCCACCCTGGGGAA...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TGCTTAGGTAGAGAGACTATGAGGAAAACCACACCACTGGTGGGGCCTAGACGCAAGTACTTGCAACAGTaGAGTTGCATACGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: CLGRETMRKTTPLVGPRRKYLQQ*SCIRSA
Trigger: CGCACTGCGTATGCAACTCAACTGTTGCAAGTACTT...GCGTCTAGGCCCCACCAGTGGTGTGGTTTTCCTCATAGTCTCTCTACCTAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAAGGCTGATGATGTGTTaGCTGCTGCAGGACTGCCTG +
Preference number: 5 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSRLMMC*LLQDCL
Trigger: CAGGCAGTCCTGCAGCAGCAAACACATCATCAGCCT...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATGAGAAACCCGGTCAATaGAATTGTTCTTCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHEKPGQ*NCSSGS
Trigger: GCTTCCAGAAGAACAATTCAATTGACCGGGTTTCTC...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTGTCCCGAGTGCATGCTaGCTGGGAAACAACATTTGG +
Preference number: 5 (lower is better)
Translates to: DCLATFLKSWTSGEREVFVPSAC*LGNNIW
Trigger: CCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGAC...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TTCTGTCCAGGGTCTGTTTGGACGTGTTTAGAAAGACCTGAGAGTCCAGTGAAGGTCCCGAGTGCATGCTaGCTGGGAAACAACATTTGG +
Preference number: 5 (lower is better)
Translates to: FCPGSVWTCLERPESPVKVPSAC*LGNNIW
Trigger: CCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGAC...CTTCACTGGACTCTCAGGTCTTTCTAAACACGTCCAAACAGACCCTGGACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CAA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAGTCCCGAGTGCATGCTaGCTGGGAAACAACATTTGG +
Preference number: 5 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSVPSAC*LGNNIW
Trigger: CCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGAC...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTTGTTATGCCCCAACATaGGCCAGTGTGGGACCCTAC +
Preference number: 5 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLCYAPT*ASVGPY
Trigger: GTAGGGTCCCACACTGGCCAATGTTGGGGCATAACA...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TGCAGTCCTGGCGTCACCTGTGACCCACAAGTTCTGGACTCAGGCAACTGTGAGCTCAAGAAAATCACTTaGAAATGTTGGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: CSPGVTCDPQVLDSGNCELKKIT*KCWGSN
Trigger: ATTGGACCCCCAACATTTCAAAGTGATTTTCTTGAG...CTCACAGTTGCCTGAGTCCAGAACTTGTGGGTCACAGGTGACGCCAGGACTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTTGGCGTTTCACCATGTaGGCCAGGATGGTCTTGATC +
Preference number: 5 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCWRFTM*ARMVLI
Trigger: GATCAAGACCATCCTGGCCAACATGGTGAAACGCCA...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATCGAGGTTTCACTGTGTaGGCCAGGATGGTCATGATC +
Preference number: 5 (lower is better)
Translates to: CLATFLKSWTSGEREVFHRGFTV*ARMVMI
Trigger: GATCATGACCATCCTGGCCAACACAGTGAAACCTCG...ATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGATAGATCACACTGGGTaGGAACAGGTGATGTCCTAC +
Preference number: 5 (lower is better)
Translates to: DADCLATFLKSWTSGEREIDHTG*EQVMSY
Trigger: GTAGGACATCACCTGTTCCAACCCAGTGTGATCTAT...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306502.6
ENST00000433976.7
CDS-3UTR CAA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTTTAAGTCGCCATTCTaGGAGAACTGCTCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: HSSSHGHLENERSFMSSTFKSPF*ENCSPP
Trigger: GGGCGGAGAGCAGTTCTCCAAGAATGGCGACTTAAA...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306502.6
ENST00000433976.7
CDS-3UTR CAA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCACGAAGTGCTGGCCCTTaGGTTTTAAGTCGCCATTCT +
Preference number: 5 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSRSAGP*VLSRHS
Trigger: AGAATGGCGACTTAAAACCAAAGGGCCAGCACTTCG...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TTCTGTCCAGGGTCTGTTTGGACGTGTTTAGAAAGACCTGAGAGTCCAGTGAAGCGAAGTGCTGGCCCTTaGGTTTTAAGTCGCCATTCT +
Preference number: 5 (lower is better)
Translates to: FCPGSVWTCLERPESPVKRSAGP*VLSRHS
Trigger: AGAATGGCGACTTAAAACCAAAGGGCCAGCACTTCG...CTTCACTGGACTCTCAGGTCTTTCTAAACACGTCCAAACAGACCCTGGACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CAA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTCAGAGCTGCCCTCCATaGTGGCTTCTTGCCGTCTGT +
Preference number: 5 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIQSCPP*WLLAVC
Trigger: ACAGACGGCAAGAAGCCACAATGGAGGGCAGCTCTG...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTACTGTCTCCTGTATTTaGAGTTCTCACGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFTVSCI*SSHVCA
Trigger: AGCACACACGTGAGAACTCAAAATACAGGAGACAGT...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCTGTCCAGGGTCTGTTaGGACGTGTTTAGAAAGACC +
Preference number: 5 (lower is better)
Translates to: DCLATFLKSWTSGEREVFLSRVC*DVFRKT
Trigger: GGTCTTTCTAAACACGTCCAAACAGACCCTGGACAG...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATCCACTCTGCCCCTCCTaGCACCCTGGTGTTTTATCT +
Preference number: 5 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNPLCPS*HPGVLS
Trigger: AGATAAAACACCAGGGTGCAAGGAGGGGCAGAGTGG...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCACTCACATGAAGTCTaGCTCTGCCACTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: DCLATFLKSWTSGEREVFHSHEV*LCHCVC
Trigger: ACACACACAGTGGCAGAGCAAGACTTCATGTGAGTG...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCAAAACATAACCCAGGATaGCTGCAGCCAGAGGACACA +
Preference number: 5 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSKHNPG*LQPEDT
Trigger: TGTGTCCTCTGGCTGCAGCAATCCTGGGTTATGTTT...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp GCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCTCTGGTGAGGACTATTaGCTGTGTCAAACAGGGCAG +
Preference number: 5 (lower is better)
Translates to: ATFLKSWTSGEREVFHVFSGEDY*LCQTGQ
Trigger: CTGCCCTGTTTGACACAGCAAATAGTCCTCACCAGA...GAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATCTGGTGAGGACTATTaGCTGTGTCAAACAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSSGEDY*LCQTGQ
Trigger: CTGCCCTGTTTGACACAGCAAATAGTCCTCACCAGA...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGAGGAACCCTCAGACATaGGGAGTGGAGATTTTCACA +
Preference number: 5 (lower is better)
Translates to: DADCLATFLKSWTSGERERNPQT*GVEIFT
Trigger: TGTGAAAATCTCCACTCCCAATGTCTGAGGGTTCCT...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp GATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTATAGATCACACTGGGTaGGAACAGGTGATGTCCTAC +
Preference number: 5 (lower is better)
Translates to: DCLATFLKSWTSGEREVFIDHTG*EQVMSY
Trigger: GTAGGACATCACCTGTTCCAACCCAGTGTGATCTAT...AAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306502.6
ENST00000433976.7
CDS-3UTR CAA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATTTTAAGTCGCCATTCTaGGAGAACTGCTCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNFKSPF*ENCSPP
Trigger: GGGCGGAGAGCAGTTCTCCAAGAATGGCGACTTAAA...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306502.6
ENST00000433976.7
CDS-3UTR CAA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGACTGTCTCCTGTATTTaGAGTTCTCACGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: DADCLATFLKSWTSGERETVSCI*SSHVCA
Trigger: AGCACACACGTGAGAACTCAAAATACAGGAGACAGT...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp GGAACACTTCCCCACAGCTGCTGTAGTCAAGAGATCTGTCCCGAGTGCATGCTTAACTGCTCTCCAATTTaGAACAAGGTTTTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: GTLPHSCCSQEICPECMLNCSPI*NKVFWH
Trigger: ATGCCAGAAAACCTTGTTCAAAATTGGAGAGCAGTT...AAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567651.5
CDS-3UTR CAA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTCCCGAGTGCATGCTaGCTGGGAAACAACATTTGG +
Preference number: 5 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNVPSAC*LGNNIW
Trigger: CCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGAC...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCTGTCCAGGGTCTGTTaGGACGTGTTTAGAAAGACC +
Preference number: 5 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLLSRVC*DVFRKT
Trigger: GGTCTTTCTAAACACGTCCAAACAGACCCTGGACAG...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGAAACATAACCCAGGATaGCTGCAGCCAGAGGACACA +
Preference number: 5 (lower is better)
Translates to: HSSSHGHLENERSFMSSTKHNPG*LQPEDT
Trigger: TGTGTCCTCTGGCTGCAGCAATCCTGGGTTATGTTT...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATGCAGGGCTGTGGGTTTaGGTTGAGATTACACCAGGA +
Preference number: 5 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNAGLWV*VEITPG
Trigger: TCCTGGTGTAATCTCAACCAAAACCCACAGCCCTGC...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTAGGCTGATGATGTGTTaGCTGCTGCAGGACTGCCTG +
Preference number: 5 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIRLMMC*LLQDCL
Trigger: CAGGCAGTCCTGCAGCAGCAAACACATCATCAGCCT...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATCGAGGTTTCACTGTGTaGGCCAGGATGGTCATGATC +
Preference number: 5 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNRGFTV*ARMVMI
Trigger: GATCATGACCATCCTGGCCAACACAGTGAAACCTCG...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp AGAGCTGTGTTATGCCCCAACATTGGCCAGTGTGGGACCCTACAGGTGGGTCATGTATTTACTCTTCTATaGCTTTTCCTTTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: RAVLCPNIGQCGTLQVGHVFTLL*LFLCSR
Trigger: CCTGGAACAAAGGAAAAGCAATAGAAGAGTAAATAC...ATGACCCACCTGTAGGGTCCCACACTGGCCAATGTTGGGGCATAACACAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp AGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTAGGAACCCTCAGACATaGGGAGTGGAGATTTTCACA +
Preference number: 5 (lower is better)
Translates to: SHIPQVMDIWRTRGLSCLRNPQT*GVEIFT
Trigger: TGTGAAAATCTCCACTCCCAATGTCTGAGGGTTCCT...AAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGCATATGCAGTATGAGTaGAGTTGCGTTGCATATGCA +
Preference number: 5 (lower is better)
Translates to: DADCLATFLKSWTSGEREHMQYE*SCVAYA
Trigger: TGCATATGCAACGCAACTCAACTCATACTGCATATG...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGAATAGGAGGCAAGTTCTATaGAAACCATGTGGGTCGTGC +
Preference number: 5 (lower is better)
Translates to: LKSWTSGEREVFHVFNVNRRQVL*KPCGSC
Trigger: GCACGACCCACATGGTTTCAATAGAACTTGCCTCCT...ATTCACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTCGAAGTGCTGGCCCTTaGGTTTTAAGTCGCCATTCT +
Preference number: 5 (lower is better)
Translates to: FSIMLGVLVCLCCYISEARSAGP*VLSRHS
Trigger: AGAATGGCGACTTAAAACCAAAGGGCCAGCACTTCG...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp GATGCTGATTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGAACTGCTCTCCAATTTaGAACAAGGTTTTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: DADCLATFLKSWTSGERENCSPI*NKVFWH
Trigger: ATGCCAGAAAACCTTGTTCAAAATTGGAGAGCAGTT...CTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAATCAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCATATGCAGTATGAGTaGAGTTGCGTTGCATATGCA +
Preference number: 5 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCHMQYE*SCVAYA
Trigger: TGCATATGCAACGCAACTCAACTCATACTGCATATG...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CTTTCACTCTGTAGCTTTCGGCAGCTTCGTGGTGGCAGGGGCTTGGTTTTCTTTTCTATTGCTTTTCCTTaGTTCCAGGTTTCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: LSLCSFRQLRGGRGLVFFSIAFP*FQVSLR
Trigger: TCTTAAGGAAACCTGGAACAAAGGAAAAGCAATAGA...AAAGAAAACCAAGCCCCTGCCACCACGAAGCTGCCGAAAGCTACAGAGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCACTCAAGAAAATCACTTaGAAATGTTGGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSLKKIT*KCWGSN
Trigger: ATTGGACCCCCAACATTTCAAAGTGATTTTCTTGAG...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGAACTGCTCTCCAATTTaGAACAAGGTTTTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: HSSSHGHLENERSFMSSTNCSPI*NKVFWH
Trigger: ATGCCAGAAAACCTTGTTCAAAATTGGAGAGCAGTT...CGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TTGCCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCACATGTTTCCAGCAAGTaGTTTACCATCTTTAGGAAT +
Preference number: 5 (lower is better)
Translates to: LPSHIPQVMDIWRTRGLSHVSSK*FTIFRN
Trigger: ATTCCTAAAGATGGTAAACAACTTGCTGGAAACATG...TGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTGAGAAACCCGGTCAATaGAATTGTTCTTCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIEKPGQ*NCSSGS
Trigger: GCTTCCAGAAGAACAATTCAATTGACCGGGTTTCTC...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp CCTAGCCACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTTCTATTGCTTTTCCTTaGTTCCAGGTTTCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: PSHIPQVMDIWRTRGLSCSIAFP*FQVSLR
Trigger: TCTTAAGGAAACCTGGAACAAAGGAAAAGCAATAGA...ACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGTGGCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp ACATTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACAACTGCTCTCCAATTTaGAACAAGGTTTTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: TFLKSWTSGEREVFHVFNNCSPI*NKVFWH
Trigger: ATGCCAGAAAACCTTGTTCAAAATTGGAGAGCAGTT...GTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGCATGTTTCCAGCAAGTaGTTTACCATCTTTAGGAAT +
Preference number: 5 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVHVSSK*FTIFRN
Trigger: ATTCCTAAAGATGGTAAACAACTTGCTGGAAACATG...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TTCCTCAAGTCATGGACATCTGGAGAACGAGAGGTCTTTCATGTCTTCAACGTGGTATTTACTCTTCTATaGCTTTTCCTTTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: FLKSWTSGEREVFHVFNVVFTLL*LFLCSR
Trigger: CCTGGAACAAAGGAAAAGCAATAGAAGAGTAAATAC...CACGTTGAAGACATGAAAGACCTCTCGTTCTCCAGATGTCCATGACTTGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TACAGGGAACAGAGTCCTCACTCCAAGAATGATCAGTGCAGCATCATAAAGATTGATAAAGGGATGAGTTaGACAATTATCAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: YREQSPHSKNDQCSIIKIDKGMS*TIIRMA
Trigger: TGCCATCCTGATAATTGTCAAACTCATCCCTTTATC...AATCTTTATGATGCTGCACTGATCATTCTTGGAGTGAGGACTCTGTTCCCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TTTTCCATCATGCTTGGTGTCTTAGTCTGTCTGTGTTGCTACATATCTGAGGCTAGGCAATTCTTTGTATaGCCTCATCGTTACTTCTGT +
Preference number: 5 (lower is better)
Translates to: FSIMLGVLVCLCCYISEARQFFV*PHRYFC
Trigger: ACAGAAGTAACGATGAGGCAATACAAAGAATTGCCT...AGCCTCAGATATGTAGCAACACAGACAGACTAAGACACCAAGCATGATGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS-3UTR CAA 90 bp TGCAGCATCATAAAGATTCAAAATACGTCTACAGAACCCCCAGAAAGACATGTCAGGCAATTCTTTGTATaGCCTCATCGTTACTTCTGT +
Preference number: 5 (lower is better)
Translates to: CSIIKIQNTSTEPPERHVRQFFV*PHRYFC
Trigger: ACAGAAGTAACGATGAGGCAATACAAAGAATTGCCT...GACATGTCTTTCTGGGGGTTCTGTAGACGTATTTTGAATCTTTATGATGCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS CCA 72 bp CCCGGGTCTACCGCGAGCGGCGGCGACTTTCCCTTCTaGAAGCGGTGCCGGGGGCGCAAGGCGCGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: PGSTASGGDFPF*KRCRGRKARGR
Trigger: CCTGCCTCGCGCCTTGCGCCCCCGGCACCGCTTCCAGAAGGGAAAGTCGCCGCCGCTCGCGGTAGACCCGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000433976.7
ENST00000564906.5
ENST00000565877.5
ENST00000620195.4
CDS CCA 72 bp CTGACCCACGGATGGCTGGATCCCAGCTCCGCGGAATaGAAGCGCTGCCCGGGTCTACCGCGAGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: LTHGWLDPSSAE*KRCPGLPRAAA
Trigger: CGCCGCCGCTCGCGGTAGACCCGGGCAGCGCTTCCATTCCGCGGAGCTGGGATCCAGCCATCCGTGGGTCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564906.5
CDS GCA 72 bp GGATGGCTGGATCCCAGCTCCGCGGAATGGAAGCGCTaGCCGGGTCTACCGCGAGCGGCGGCGACTTTCCCT +
Preference number: 6 (lower is better)
Translates to: GWLDPSSAEWKR*PGLPRAAATFP
Trigger: AGGGAAAGTCGCCGCCGCTCGCGGTAGACCCGGGCAGCGCTTCCATTCCGCGGAGCTGGGATCCAGCCATCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564906.5
CDS CCA 72 bp ACGGATGGCTGGATCCCTATTTCCAGCTCCGCGGAATaGAAGCGCTGCCCGGGTCTACCGCGAGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: TDGWIPISSSAE*KRCPGLPRAAA
Trigger: CGCCGCCGCTCGCGGTAGACCCGGGCAGCGCTTCCATTCCGCGGAGCTGGAAATAGGGATCCAGCCATCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS GCA 72 bp TGGATCCCTATTTCCAGCTCCGCGGAATGGAAGCGCTaGCCGGGTCTACCGCGAGCGGCGGCGACTTTCCCT +
Preference number: 6 (lower is better)
Translates to: WIPISSSAEWKR*PGLPRAAATFP
Trigger: AGGGAAAGTCGCCGCCGCTCGCGGTAGACCCGGGCAGCGCTTCCATTCCGCGGAGCTGGAAATAGGGATCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS TCA 72 bp GTGAATCTATGTGGAAGGTACAGTCTCCATTCCTCCTaGCCCACGGATGGCTGGATCCCAGCTCCGCGGAAT +
Preference number: 6 (lower is better)
Translates to: VNLCGRYSLHSS*PTDGWIPAPRN
Trigger: ATTCCGCGGAGCTGGGATCCAGCCATCCGTGGGTCAGGAGGAATGGAGACTGTACCTTCCACATAGATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564906.5
CDS CCA 72 bp TGGAAGGTACAGTCTCCATTCCTCCTGACCCACGGATaGCTGGATCCCTATTTCCAGCTCCGCGGAATGGAA +
Preference number: 6 (lower is better)
Translates to: WKVQSPFLLTHG*LDPYFQLRGME
Trigger: TTCCATTCCGCGGAGCTGGAAATAGGGATCCAGCCATCCGTGGGTCAGGAGGAATGGAGACTGTACCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS TCA 72 bp GTGAATCTATGTGGAAGGTACAGTCTCCATTCCTCCTaGCCCACGGATGGCTGGATCCCTATTTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: VNLCGRYSLHSS*PTDGWIPISSS
Trigger: GGAGCTGGAAATAGGGATCCAGCCATCCGTGGGTCAGGAGGAATGGAGACTGTACCTTCCACATAGATTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433976.7
ENST00000620195.4
CDS GCA 72 bp TTTAAGTCGCCATTCTTGGAGAACTGCTCTCCGCCCTaGCCTCAACTCCTCTTCCTGCTCCAGCCAATAGAT +
Preference number: 6 (lower is better)
Translates to: FKSPFLENCSPP*PQLLFLLQPID
Trigger: ATCTATTGGCTGGAGCAGGAAGAGGAGTTGAGGGCAGGGCGGAGAGCAGTTCTCCAAGAATGGCGACTTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306502.6
ENST00000433976.7
ENST00000565414.1
ENST00000567651.5