RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF773 (Homo sapiens)

Ensembl gene IDs: ENSG00000152439

Ensembl transcript IDs: ENST00000282292.9, ENST00000593916.5, ENST00000597061.1, ENST00000598770.5, ENST00000599847.5

Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCCATGGATTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTTaGGGGCACCCACACGGATTGTCCATCTCCTTATATCCACTGCCA +
Preference number: 1 (lower is better)
Translates to: IHGFLQSPVPWSHTP*GHPHGLSISLYPLP
Trigger: TGGCAGTGGATATAAGGAGATGGACAATCCGTGTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAATCCATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597061.1
3UTR TCA 90 bp ATCCATGGATTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTTaGGGGCACCCACACGGATTGTCCATCTCCTGTAAAAACACAAGC +
Preference number: 1 (lower is better)
Translates to: IHGFLQSPVPWSHTP*GHPHGLSISCKNTS
Trigger: GCTTGTGTTTTTACAGGAGATGGACAATCCGTGTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAATCCATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR GCA 90 bp CACCTTGAGGGCACCCACACGGATTGTCCATCTCCTTATATCCACTaGCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTT +
Preference number: 1 (lower is better)
Translates to: HLEGTHTDCPSPYIH*QQTCPGVSHSSGQF
Trigger: AAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGGATATAAGGAGATGGACAATCCGTGTGGGTGCCCTCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597061.1
3UTR CCA 90 bp CAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATaGCTCGTACTGGAGGAGCTGGGCCCACAGTTGAGATCCATGGAT +
Preference number: 1 (lower is better)
Translates to: QSVLVLSLHSDSTSS*LVLEELGPQLRSMD
Trigger: ATCCATGGATCTCAACTGTGGGCCCAGCTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
3UTR GCA 90 bp CAAGAGGCCAGTCTCTTGGAAATGCCTGCCAGGGATGGCAGACCTTaGTGTAATGCACCCATTGGTTTAATCTGTGCATTAATAGCTCTC +
Preference number: 1 (lower is better)
Translates to: QEASLLEMPARDGRP*CNAPIGLICALIAL
Trigger: GAGAGCTATTAATGCACAGATTAAACCAATGGGTGCATTACAGCAAGGTCTGCCATCCCTGGCAGGCATTTCCAAGAGACTGGCCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR TCA 90 bp AGAAGCAAAGGCTTTTGTGGCTGTAACCAGGTGGCATGTTGTTGCTaGAGCATCTGTTCTACAAGCTATAATTCAGCTTCTGCCTCCTTA +
Preference number: 1 (lower is better)
Translates to: RSKGFCGCNQVACCC*SICSTSYNSASASL
Trigger: TAAGGAGGCAGAAGCTGAATTATAGCTTGTAGAACAGATGCTTCAGCAACAACATGCCACCTGGTTACAGCCACAAAAGCCTTTGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR GCA 90 bp TACAAAATCTGTGAGAGTGATTTGCCATGCAGTCGACATTTCCCATaGTGTGGCCTGTTGTTGGGAATCCAAGGGAACAATAATTTTGTC +
Preference number: 1 (lower is better)
Translates to: YKICESDLPCSRHFP*CGLLLGIQGNNNFV
Trigger: GACAAAATTATTGTTCCCTTGGATTCCCAACAACAGGCCACAGCATGGGAAATGTCGACTGCATGGCAAATCACTCTCACAGATTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR GCA 90 bp AAATCCTGGATTGCCAATAGTTTAATTTGTAAGTCTCATATCCTATaGCGTAAGCAAATCTTCACCCCAGTTTTCCACATCAAGAGTGTC +
Preference number: 1 (lower is better)
Translates to: KSWIANSLICKSHIL*RKQIFTPVFHIKSV
Trigger: GACACTCTTGATGTGGAAAACTGGGGTGAAGATTTGCTTACGGCATAGGATATGAGACTTACAAATTAAACTATTGGCAATCCAGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 90 bp GATCCATGGATTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTaGAGGGCACCCACACGGATTGTCCATCTCCTTATATCCACTGCC +
Preference number: 2 (lower is better)
Translates to: DPWISPVSRSMVTHT*RAPTRIVHLLISTA
Trigger: GGCAGTGGATATAAGGAGATGGACAATCCGTGTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAATCCATGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597061.1
3UTR-3UTR CCA 90 bp GCTGGGCCCACAGTTGAGATCCATGGATTTCTCCAGTCTCCCGTTCCATGGTCACCAGCAGACTTGTCCTaGGGTTTCTCATTCTTCTGG +
Preference number: 2 (lower is better)
Translates to: AGPTVEIHGFLQSPVPWSPADLS*GFSFFW
Trigger: CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGG...TGACCATGGAACGGGAGACTGGAGAAATCCATGGATCTCAACTGTGGGCCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
3UTR CAA 90 bp GTGGGGTATGACTGCCCTCAGCATTCCTTCTGGTGGCAGATGCAGTaGTCAGCTTGCCAGCATCCTGCATTCATGAGAACAGTTTGCTGT +
Preference number: 2 (lower is better)
Translates to: VGYDCPQHSFWWQMQ*SACQHPAFMRTVCC
Trigger: ACAGCAAACTGTTCTCATGAATGCAGGATGCTGGCAAGCTGACAACTGCATCTGCCACCAGAAGGAATGCTGAGGGCAGTCATACCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR GCA 90 bp AAGCAAACCCTCGTCCCCATATCAGTAAGTCTACCGGGCCTTTCCATTGTCCTTTCTCTTGGAAATGCCTaGCAGGGATGGCAGACCTTG +
Preference number: 2 (lower is better)
Translates to: KQTLVPISVSLPGLSIVLSLGNA*QGWQTL
Trigger: CAAGGTCTGCCATCCCTGGCAGGCATTTCCAAGAGA...AAGGACAATGGAAAGGCCCGGTAGACTTACTGATATGGGGACGAGGGTTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR GCA 90 bp CAGTGGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTCACGCCTGGCTGTTTCTaGTTTAAGTCAGGTCATATT +
Preference number: 2 (lower is better)
Translates to: QWRDLSSPQTLPPRFMPFTPGCF*FKSGHI
Trigger: AATATGACCTGACTTAAAGCAGAAACAGCCAGGCGT...GAATGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
3UTR-3UTR GCA 90 bp TGGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTCTTCAGGCGCCCACCACCATaGCCAGTAAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: WRDLSSPQTLPPRFMPFFRRPPP*PVNFCI
Trigger: AATACAAAAATTTACTGGGCATGGTGGTGGGCGCCT...GAAGAATGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
3UTR-3UTR GCA 90 bp GCCACCAGTGCCAGCAAAATTTATGCCATGAGGTCTGATTCTCACTTCTCCCATAGTCGACATTTCCCATaGTGTGGCCTGTTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: ATSASKIYAMRSDSHFSHSRHFP*CGLLLG
Trigger: TCCCAACAACAGGCCACAGCATGGGAAATGTCGACT...ATGGGAGAAGTGAGAATCAGACCTCATGGCATAAATTTTGCTGGCACTGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 90 bp GCCTTGGGGCAAAACTTTCCATTGATAACAAGAGACAGGCTCCCTTaGATTAACAGAAGGCACAGAGAAGGCATATCCAGGCCTATCCTG +
Preference number: 2 (lower is better)
Translates to: ALGQNFPLITRDRLP*INRRHREGISRPIL
Trigger: CAGGATAGGCCTGGATATGCCTTCTCTGTGCCTTCTGTTAATCAAAGGGAGCCTGTCTCTTGTTATCAATGGAAAGTTTTGCCCCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR CCA 90 bp GATCTATTACTACAAGAGGCCAGTCTCTTGGAAATGCCTGCCAGGGATGGCAGATGGCAAAGCAGTGGGTaGAGGAGAAATATCAATGAC +
Preference number: 2 (lower is better)
Translates to: DLLLQEASLLEMPARDGRWQSSG*RRNIND
Trigger: GTCATTGATATTTCTCCTCCACCCACTGCTTTGCCA...TCTGCCATCCCTGGCAGGCATTTCCAAGAGACTGGCCTCTTGTAGTAATAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 90 bp GATGCAGTTGTCAGCTTGCCAGCATCCTGCATTCATGAGAACAGTTaGCTGTTTGCTCATATAGCCTCCAGTGGTATACTGAGTTGGTCA +
Preference number: 2 (lower is better)
Translates to: DAVVSLPASCIHENS*LFAHIASSGILSWS
Trigger: TGACCAACTCAGTATACCACTGGAGGCTATATGAGCAAACAGCAAACTGTTCTCATGAATGCAGGATGCTGGCAAGCTGACAACTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR TCA 90 bp ACAGATTTGTGTATGAATTGGCCTAAAAGTCCTGTTGGAGAATGGGAGGTAGGAAGCTGGGCCCACAGTTaGGATCCATGGATTTCTCCA +
Preference number: 2 (lower is better)
Translates to: TDLCMNWPKSPVGEWEVGSWAHS*DPWISP
Trigger: TGGAGAAATCCATGGATCTCAACTGTGGGCCCAGCT...TCCTACCTCCCATTCTCCAACAGGACTTTTAGGCCAATTCATACACAAATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR TCA 90 bp ACAGATTTGTGTATGAATTGGCCTAAAAGTCCTGTTGGAGAATGGGAGGTAGGAGGGTTGATGTCAGTGTaGCTCCAGTCGGTCCTTGTT +
Preference number: 2 (lower is better)
Translates to: TDLCMNWPKSPVGEWEVGGLMSV*LQSVLV
Trigger: AACAAGGACCGACTGGAGTCACACTGACATCAACCC...TCCTACCTCCCATTCTCCAACAGGACTTTTAGGCCAATTCATACACAAATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR TCA 90 bp TGTGACTCCAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATACCTCTTTAGGGCACTaGCCTTATATCCACTGCCAG +
Preference number: 2 (lower is better)
Translates to: CDSSRSLFCLCIQIQLAHTSLGH*PYIHCQ
Trigger: CTGGCAGTGGATATAAGGTCAGTGCCCTAAAGAGGT...ATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR TCA 90 bp CTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGTGCCCTATGTTACCCTaGTTCAGAAACTTCCCACTC +
Preference number: 2 (lower is better)
Translates to: LVLSLHSDSTSSWLVLEECPMLP*FRNFPL
Trigger: GAGTGGGAAGTTTCTGAATCAGGGTAACATAGGGCA...CTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR TCA 90 bp AATGACAATGCAATTGCTGCTGCAACTTCAGGCTTTGTATTTGTTATCCTAGCCCTTCTCCCATCTAAATaGCCATGGGGACCCCAGTCG +
Preference number: 2 (lower is better)
Translates to: NDNAIAAATSGFVFVILALLPSK*PWGPQS
Trigger: CGACTGGGGTCCCCATGGTCATTTAGATGGGAGAAG...GGCTAGGATAACAAATACAAAGCCTGAAGTTGCAGCAGCAATTGCATTGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR GCA 90 bp TTTCCCTCTAACATTTGCCAATGTCATTCTGCCAGAGTCTTAATATCCATACCAACATCCTTCCATGGGTaGAACGCCAGGGACAGGCTG +
Preference number: 2 (lower is better)
Translates to: FPSNICQCHSARVLISIPTSFHG*NARDRL
Trigger: CAGCCTGTCCCTGGCGTTGCACCCATGGAAGGATGT...TGGTATGGATATTAAGACTCTGGCAGAATGACATTGGCAAATGTTAGAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR CCA 90 bp CCTTTGTATTTATTAGGTAGAATCAACAGGGAGGAAGAGGTAATGGTTGGTCAGGGTTACATCCTTCCATaGGTGCAACGCCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: PLYLLGRINREEEVMVGQGYILP*VQRQGQ
Trigger: CTGTCCCTGGCGTTGCACCCATGGAAGGATGTAACC...CTGACCAACCATTACCTCTTCCTCCCTGTTGATTCTACCTAATAAATACAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR TCA 90 bp ACAGATTTGTGTATGAATTGGCCTAAAAGTCCTGTTGGAGAATGGGAGGTAGGAGAGACAGGCTCCCTTTaGTTAACAGAAGGCACAGAG +
Preference number: 2 (lower is better)
Translates to: TDLCMNWPKSPVGEWEVGETGSL*LTEGTE
Trigger: CTCTGTGCCTTCTGTTAATCAAAGGGAGCCTGTCTC...TCCTACCTCCCATTCTCCAACAGGACTTTTAGGCCAATTCATACACAAATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR TCA 90 bp AATGACAATGCAATTGCTGCTGCAACTTCAGGCTTTGTATTTGTTATCCTAGCCTGGCTGCAAGGCAGATaGAACATACGAGTAAGGGCA +
Preference number: 2 (lower is better)
Translates to: NDNAIAAATSGFVFVILAWLQGR*NIRVRA
Trigger: TGCCCTTACTCGTATGTTTCATCTGCCTTGCAGCCA...GGCTAGGATAACAAATACAAAGCCTGAAGTTGCAGCAGCAATTGCATTGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR TCA 90 bp GTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGCTGAAATGTAATTTTGTTTaGGGTGGTAGCTGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: VLSLHSDSTSSWLVLEELKCNFV*GGSWSP
Trigger: AGGAGACCAGCTACCACCTCAAACAAAATTACATTT...CAGCTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR GCA 90 bp GTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGCTGTCCTTGTTCTGTCTTTaGATTCAGATTCAACTAGCT +
Preference number: 2 (lower is better)
Translates to: VLSLHSDSTSSWLVLEELSLFCL*IQIQLA
Trigger: AGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGA...CAGCTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
3UTR-3UTR GCA 90 bp TTTCCCTCTAACATTTGCCAATGTCATTCTGCCAGAGTCTTAATATCCATACCATGGAGTCAGGGGTTTTaGTCCAGCAGTTTCTCAGCT +
Preference number: 2 (lower is better)
Translates to: FPSNICQCHSARVLISIPWSQGF*SSSFSA
Trigger: AGCTGAGAAACTGCTGGAGCAAAACCCCTGACTCCA...TGGTATGGATATTAAGACTCTGGCAGAATGACATTGGCAAATGTTAGAGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR GCA 90 bp CACTCTAGTGGCAAAGCAGTGGGTGGAGGAGAAATATCAATGACCCACATCAGATTCCTAAGCCTTGTCTaGTCTGATATCTCATTTTCT +
Preference number: 2 (lower is better)
Translates to: HSSGKAVGGGEISMTHIRFLSLV*SDISFS
Trigger: AGAAAATGAGATATCAGAGCAGACAAGGCTTAGGAA...TCTGATGTGGGTCATTGATATTTCTCCTCCACCCACTGCTTTGCCACTAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR GCA 90 bp GATCTATTACTACAAGAGGCCAGTCTCTTGGAAATGCCTGCCAGGGATGGCAGACCTTTTCTATCTGTTTaGCCAGTTATTGATATAGGA +
Preference number: 2 (lower is better)
Translates to: DLLLQEASLLEMPARDGRPFLSV*PVIDIG
Trigger: TCCTATATCAATAACTGGGCAAACAGATAGAAAAGG...TCTGCCATCCCTGGCAGGCATTTCCAAGAGACTGGCCTCTTGTAGTAATAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR GCA 90 bp ACAGATTTGTGTATGAATTGGCCTAAAAGTCCTGTTGGAGAATGGGAGGTAGGAATACCTAGCATTGGGTaGAGCCAATTAATGTCCCCT +
Preference number: 2 (lower is better)
Translates to: TDLCMNWPKSPVGEWEVGIPSIG*SQLMSP
Trigger: AGGGGACATTAATTGGCTGCACCCAATGCTAGGTAT...TCCTACCTCCCATTCTCCAACAGGACTTTTAGGCCAATTCATACACAAATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR CCA 90 bp ACAGATTTGTGTATGAATTGGCCTAAAAGTCCTGTTGGAGAATGGGAGGTAGGACTAGTGGCAAAGCAGTaGGTGGAGGAGAAATATCAA +
Preference number: 2 (lower is better)
Translates to: TDLCMNWPKSPVGEWEVGLVAKQ*VEEKYQ
Trigger: TTGATATTTCTCCTCCACCCACTGCTTTGCCACTAG...TCCTACCTCCCATTCTCCAACAGGACTTTTAGGCCAATTCATACACAAATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 90 bp TCCCATGCTGTGGCCTGTTGTTGGGAATCCAAGGGAACAATAATTTaGTCTGGATCACATCCCATAAACATTTTTGATCTATGCCTACCT +
Preference number: 2 (lower is better)
Translates to: SHAVACCWESKGTII*SGSHPINIFDLCLP
Trigger: AGGTAGGCATAGATCAAAAATGTTTATGGGATGTGATCCAGACAAAATTATTGTTCCCTTGGATTCCCAACAACAGGCCACAGCATGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR TCA 90 bp AATGACAATGCAATTGCTGCTGCAACTTCAGGCTTTGTATTTGTTATCCTAGCCACTAATTCTGAGCATTaGGCTGAAACTCCAGAGGTC +
Preference number: 2 (lower is better)
Translates to: NDNAIAAATSGFVFVILATNSEH*AETPEV
Trigger: GACCTCTGGAGTTTCAGCTCAATGCTCAGAATTAGT...GGCTAGGATAACAAATACAAAGCCTGAAGTTGCAGCAGCAATTGCATTGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR CCA 90 bp CCTTTGTATTTATTAGGTAGAATCAACAGGGAGGAAGAGGTAATGGTTGGTCAGAGTCCTGTTGGAGAATaGGAGGTAGGAAGAATAAAC +
Preference number: 2 (lower is better)
Translates to: PLYLLGRINREEEVMVGQSPVGE*EVGRIN
Trigger: GTTTATTCTTCCTACCTCCCATTCTCCAACAGGACT...CTGACCAACCATTACCTCTTCCTCCCTGTTGATTCTACCTAATAAATACAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR TCA 90 bp TTTCCCTCTAACATTTGCCAATGTCATTCTGCCAGAGTCTTAATATCCATACCAGTGGCAGTCTCAATGTaGCTGGCTACATTTACAATA +
Preference number: 2 (lower is better)
Translates to: FPSNICQCHSARVLISIPVAVSM*LATFTI
Trigger: TATTGTAAATGTAGCCAGTCACATTGAGACTGCCAC...TGGTATGGATATTAAGACTCTGGCAGAATGACATTGGCAAATGTTAGAGGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR TCA 90 bp CCTTTGTATTTATTAGGTAGAATCAACAGGGAGGAAGAGGTAATGGTTGGTCAGGAAGATTGGGCTTGTTaGAATACAGAACCGATTAGT +
Preference number: 2 (lower is better)
Translates to: PLYLLGRINREEEVMVGQEDWAC*NTEPIS
Trigger: ACTAATCGGTTCTGTATTTCAACAAGCCCAATCTTC...CTGACCAACCATTACCTCTTCCTCCCTGTTGATTCTACCTAATAAATACAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR GCA 90 bp ACAGATTTGTGTATGAATTGGCCTAAAAGTCCTGTTGGAGAATGGGAGGTAGGATGGGTTAGGAATATATaGCCAATAAGTTTTTGCCTC +
Preference number: 2 (lower is better)
Translates to: TDLCMNWPKSPVGEWEVGWVRNI*PISFCL
Trigger: GAGGCAAAAACTTATTGGGCATATATTCCTAACCCA...TCCTACCTCCCATTCTCCAACAGGACTTTTAGGCCAATTCATACACAAATCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR GCA 90 bp TTTCCCTCTAACATTTGCCAATGTCATTCTGCCAGAGTCTTAATATCCATACCATCCTTGTTCTGTCTTTaGATTCAGATTCAACTAGCT +
Preference number: 2 (lower is better)
Translates to: FPSNICQCHSARVLISIPSLFCL*IQIQLA
Trigger: AGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGA...TGGTATGGATATTAAGACTCTGGCAGAATGACATTGGCAAATGTTAGAGGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CCA 72 bp CATATGGAGCCAAGCCTAGTGGGTTACATCCTTCCATaGGTGCAACGCCAGGGACAGGCTGGCAAGTGGGGT +
Preference number: 3 (lower is better)
Translates to: HMEPSLVGYILP*VQRQGQAGKWG
Trigger: ACCCCACTTGCCAGCCTGTCCCTGGCGTTGCACCCATGGAAGGATGTAACCCACTAGGCTTGGCTCCATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR TCA 72 bp GCTCATGGCTCGTACTGGAGGAGCTGGGCCCACAGTTaGGATCCATGGATTTCTCCAGTCTCCCGTTCCATG +
Preference number: 3 (lower is better)
Translates to: AHGSYWRSWAHS*DPWISPVSRSM
Trigger: CATGGAACGGGAGACTGGAGAAATCCATGGATCTCAACTGTGGGCCCAGCTCCTCCAGTACGAGCCATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
3UTR CCA 72 bp CACGTGGGGTATGACTGCCCTCAGCATTCCTTCTGGTaGCAGATGCAGTTGTCAGCTTGCCAGCATCCTGCA +
Preference number: 3 (lower is better)
Translates to: HVGYDCPQHSFW*QMQLSACQHPA
Trigger: TGCAGGATGCTGGCAAGCTGACAACTGCATCTGCCACCAGAAGGAATGCTGAGGGCAGTCATACCCCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CCA 72 bp CTGCACGTGGGGTATGACTGCCCTCAGCATTCCTTCTaGTGGCAGATGCAGTTGTCAGCTTGCCAGCATCCT +
Preference number: 3 (lower is better)
Translates to: LHVGYDCPQHSF*WQMQLSACQHP
Trigger: AGGATGCTGGCAAGCTGACAACTGCATCTGCCACCAGAAGGAATGCTGAGGGCAGTCATACCCCACGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR TCA 72 bp TTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTTaGGGGCACCCACACGGATTGTCCATCTCCTGTAAA +
Preference number: 3 (lower is better)
Translates to: FLQSPVPWSHTP*GHPHGLSISCK
Trigger: TTTACAGGAGATGGACAATCCGTGTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR TCA 72 bp TTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTTaGGGGCACCCACACGGATTGTCCATCTCCTTATAT +
Preference number: 3 (lower is better)
Translates to: FLQSPVPWSHTP*GHPHGLSISLY
Trigger: ATATAAGGAGATGGACAATCCGTGTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597061.1
3UTR GCA 72 bp GGCACCCACACGGATTGTCCATCTCCTTATATCCACTaGCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCT +
Preference number: 3 (lower is better)
Translates to: GTHTDCPSPYIH*QQTCPGVSHSS
Trigger: AGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGGATATAAGGAGATGGACAATCCGTGTGGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597061.1
3UTR-3UTR CAA 90 bp GTGCAGTGGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTAAGTCAGGTCATATaGATTCAGCGACAGTCTAAG +
Preference number: 3 (lower is better)
Translates to: VQWRDLSSPQTLPPRFMPLSQVI*IQRQSK
Trigger: CTTAGACTGTCGCTGAATCAATATGACCTGACTTAA...TGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCCACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
3UTR GCA 72 bp TGTCAGTGTGACTCCAGTCGGTCCTTGTTCTGTCTTTaGATTCAGATTCAACTAGCTCATGGCTCGTACTGG +
Preference number: 3 (lower is better)
Translates to: CQCDSSRSLFCL*IQIQLAHGSYW
Trigger: CCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTCACACTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
3UTR GCA 72 bp AAGATCTATTACTACAAGAGGCCAGTCTCTTGGAAATaGCTGCCAGGGATGGCAGACCTTGCTGTAATGCAC +
Preference number: 3 (lower is better)
Translates to: KIYYYKRPVSWK*LPGMADLAVMH
Trigger: GTGCATTACAGCAAGGTCTGCCATCCCTGGCAGGCATTTCCAAGAGACTGGCCTCTTGTAGTAATAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR GCA 72 bp TGTGAGAGTGATTTGCCATGCAGTCGACATTTCCCATaGTGTGGCCTGTTGTTGGGAATCCAAGGGAACAAT +
Preference number: 3 (lower is better)
Translates to: CESDLPCSRHFP*CGLLLGIQGNN
Trigger: ATTGTTCCCTTGGATTCCCAACAACAGGCCACAGCATGGGAAATGTCGACTGCATGGCAAATCACTCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CCA 72 bp TTCACCCCAGTTTTCCACATCAAGAGTGTCTGTCTGTaGAAACCATGGGTTATGCGTGATAACCTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: FTPVFHIKSVCL*KPWVMRDNLLQ
Trigger: CTGCAGGAGGTTATCACGCATAACCCATGGTTTCCACAGACAGACACTCTTGATGTGGAAAACTGGGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR CAA 90 bp CTGAATTGGACCTCTCTTTCCTTGATAATGCCATTGAGGCAAAGGTGGGCTAAAGGGCACCCACACGGATaGTCCATCTCCTGTAAAAAC +
Preference number: 3 (lower is better)
Translates to: LNWTSLSLIMPLRQRWAKGHPHG*SISCKN
Trigger: GTTTTTACAGGAGATGGACAATCCGTGTGGGTGCCC...TTTAGCCCACCTTTGCCTCAATGGCATTATCAAGGAAAGAGAGGTCCAATTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR TCA 72 bp ATATGGGCAAAAGGTGACAGACAATGTCATCAGACATaGCCAGCTGTTTCCCCAGTTTGGCACGTGACATGT +
Preference number: 3 (lower is better)
Translates to: IWAKGDRQCHQT*PAVSPVWHVTC
Trigger: ACATGTCACGTGCCAAACTGGGGAAACAGCTGGTCATGTCTGATGACATTGTCTGTCACCTTTTGCCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR GCA 72 bp ACATCAAGAGTGTCTGTCTGTGGAAACCATGGGTTATaGGTGATAACCTCCTGCAGCAGCTTAGCTAGTGTT +
Preference number: 3 (lower is better)
Translates to: TSRVSVCGNHGL*VITSCSSLASV
Trigger: AACACTAGCTAAGCTGCTGCAGGAGGTTATCACGCATAACCCATGGTTTCCACAGACAGACACTCTTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR GCA 72 bp AGTCTCTTGGAAATGCCTGCCAGGGATGGCAGACCTTaGTGTAATGCACCCATTGGTTTAATCTGTGCATTA +
Preference number: 3 (lower is better)
Translates to: SLLEMPARDGRP*CNAPIGLICAL
Trigger: TAATGCACAGATTAAACCAATGGGTGCATTACAGCAAGGTCTGCCATCCCTGGCAGGCATTTCCAAGAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CCA 72 bp ACCTCTCTTTCCTTGATAATGCCATTGAGGCAAAGGTaGGCTAAAGCCCATTCTGTGCCAAGCAAGTTGTGT +
Preference number: 3 (lower is better)
Translates to: TSLSLIMPLRQR*AKAHSVPSKLC
Trigger: ACACAACTTGCTTGGCACAGAATGGGCTTTAGCCCACCTTTGCCTCAATGGCATTATCAAGGAAAGAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR CAA 90 bp TTTCCCTCTAACATTTGCCAATGTCATTCTGCCAGAGTCTTAATATCCATACCACAAGAGGCCAGTCTCTaGGAAATGCCTGCCAGGGAT +
Preference number: 3 (lower is better)
Translates to: FPSNICQCHSARVLISIPQEASL*EMPARD
Trigger: ATCCCTGGCAGGCATTTCCAAGAGACTGGCCTCTTG...TGGTATGGATATTAAGACTCTGGCAGAATGACATTGGCAAATGTTAGAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CCA 72 bp AACAATAAGATCTATTACTACAAGAGGCCAGTCTCTTaGAAATGCCTGCCAGGGATGGCAGACCTTGCTGTA +
Preference number: 3 (lower is better)
Translates to: NNKIYYYKRPVS*KCLPGMADLAV
Trigger: TACAGCAAGGTCTGCCATCCCTGGCAGGCATTTCCAAGAGACTGGCCTCTTGTAGTAATAGATCTTATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CCA 72 bp CATGCAGTCGACATTTCCCATGCTGTGGCCTGTTGTTaGGAATCCAAGGGAACAATAATTTTGTCTGGATCA +
Preference number: 3 (lower is better)
Translates to: HAVDISHAVACC*ESKGTIILSGS
Trigger: TGATCCAGACAAAATTATTGTTCCCTTGGATTCCCAACAACAGGCCACAGCATGGGAAATGTCGACTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CCA 72 bp TGCACATCCAATTTTTCACACATTGAGCTGTTTGAATaGAGCTGTGCAGTGCTACTGAGGACAACACAGCAG +
Preference number: 3 (lower is better)
Translates to: CTSNFSHIELFE*SCAVLLRTTQQ
Trigger: CTGCTGTGTTGTCCTCAGTAGCACTGCACAGCTCCATTCAAACAGCTCAATGTGTGAAAAATTGGATGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR TCA 72 bp GGCTTTTGTGGCTGTAACCAGGTGGCATGTTGTTGCTaGAGCATCTGTTCTACAAGCTATAATTCAGCTTCT +
Preference number: 3 (lower is better)
Translates to: GFCGCNQVACCC*SICSTSYNSAS
Trigger: AGAAGCTGAATTATAGCTTGTAGAACAGATGCTTCAGCAACAACATGCCACCTGGTTACAGCCACAAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR GCA 72 bp ACAAGCTATAATTCAGCTTCTGCCTCCTTAGTAAGTTaGCGAGGAGAGTCTAATGAAGAATCTCCTTGGAGG +
Preference number: 3 (lower is better)
Translates to: TSYNSASASLVS*RGESNEESPWR
Trigger: CCTCCAAGGAGATTCTTCATTAGACTCTCCTCGGCAACTTACTAAGGAGGCAGAAGCTGAATTATAGCTTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CCA 72 bp ATCAAAGGGAGCCCATTCTGTACAATCAATACAATTTaGGTGATGGGGCCAGGAGTGATTAGTAACTACACC +
Preference number: 3 (lower is better)
Translates to: IKGSPFCTINTI*VMGPGVISNYT
Trigger: GGTGTAGTTACTAATCACTCCTGGCCCCATCACCCAAATTGTATTGATTGTACAGAATGGGCTCCCTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR CAA 90 bp TTTCCCTCTAACATTTGCCAATGTCATTCTGCCAGAGTCTTAATATCCATACCACCAGGTGGCATGTTGTaGCTGAAGCATCTGTTCTAC +
Preference number: 3 (lower is better)
Translates to: FPSNICQCHSARVLISIPPGGML*LKHLFY
Trigger: GTAGAACAGATGCTTCAGCAACAACATGCCACCTGG...TGGTATGGATATTAAGACTCTGGCAGAATGACATTGGCAAATGTTAGAGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR CAA 90 bp GCCACCAGTGCCAGCAAAATTTATGCCATGAGGTCTGATTCTCACTTCTCCCATTATGATTCCTTGTCCTaGAGGATTGTAAGGAATTTC +
Preference number: 3 (lower is better)
Translates to: ATSASKIYAMRSDSHFSHYDSLS*RIVRNF
Trigger: GAAATTCCTTACAATCCTCAAGGACAAGGAATCATA...ATGGGAGAAGTGAGAATCAGACCTCATGGCATAAATTTTGCTGGCACTGGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR TCA 72 bp GCTGCCATTCATAAATGGGAGTGCTGTCTTCCATATTaGCTCCTGAATTGGACCTCTCTTTCCTTGATAATG +
Preference number: 3 (lower is better)
Translates to: AAIHKWECCLPY*LLNWTSLSLIM
Trigger: CATTATCAAGGAAAGAGAGGTCCAATTCAGGAGTCAATATGGAAGACAGCACTCCCATTTATGAATGGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR GCA 72 bp TGGGTTAGGAATATATGCCCAATAAGTTTTTGCCTCTaGACAGGGAAAACATACCGCACAGGATATTACAGC +
Preference number: 3 (lower is better)
Translates to: WVRNICPISFCL*TGKTYRTGYYS
Trigger: GCTGTAATATCCTGTGCGGTATGTTTTCCCTGTGCAGAGGCAAAAACTTATTGGGCATATATTCCTAACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
3UTR GCA 72 bp TATTATTCCTACAAAATCTGTGAGAGTGATTTGCCATaGAGTCGACATTTCCCATGCTGTGGCCTGTTGTTG +
Preference number: 3 (lower is better)
Translates to: YYSYKICESDLP*SRHFPCCGLLL
Trigger: CAACAACAGGCCACAGCATGGGAAATGTCGACTGCATGGCAAATCACTCTCACAGATTTTGTAGGAATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR-3UTR CAA 90 bp CCTTTGTATTTATTAGGTAGAATCAACAGGGAGGAAGAGGTAATGGTTGGTCAGTACAATCAATACAATTaGGGTGATGGGGCCAGGAGT +
Preference number: 3 (lower is better)
Translates to: PLYLLGRINREEEVMVGQYNQYN*GDGARS
Trigger: ACTCCTGGCCCCATCACCCAAATTGTATTGATTGTA...CTGACCAACCATTACCTCTTCCTCCCTGTTGATTCTACCTAATAAATACAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR GCA 72 bp TTATCTATTATTCCTACAAAATCTGTGAGAGTGATTTaGCATGCAGTCGACATTTCCCATGCTGTGGCCTGT +
Preference number: 3 (lower is better)
Translates to: LSIIPTKSVRVI*HAVDISHAVAC
Trigger: ACAGGCCACAGCATGGGAAATGTCGACTGCATGGCAAATCACTCTCACAGATTTTGTAGGAATAATAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CCA 72 bp TTTAGAAGAGTCATCAGTAAAATAGGTCTGTCTGCCTaGAATAGGCTTGTGATGAGTGATTACAGGAAGGGT +
Preference number: 3 (lower is better)
Translates to: FRRVISKIGLSA*NRLVMSDYRKG
Trigger: ACCCTTCCTGTAATCACTCATCACAAGCCTATTCCAGGCAGACAGACCTATTTTACTGATGACTCTTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR TCA 72 bp TTTTTGGTATTACAAATACTGGTGAATTCCAGGGGCTaGCTCTTCAATATGTCCTGCATCCAATCGCTCTTT +
Preference number: 3 (lower is better)
Translates to: FLVLQILVNSRG*LFNMSCIQSLF
Trigger: AAAGAGCGATTGGATGCAGGACATATTGAAGAGTCAGCCCCTGGAATTCACCAGTATTTGTAATACCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR GCA 72 bp TGTAGTCACATGAACATAGCTGAGTTTGCCAAAGGCTaGTATATGTGTAACATCCATCTGCCAGATTTCATA +
Preference number: 3 (lower is better)
Translates to: CSHMNIAEFAKG*YMCNIHLPDFI
Trigger: TATGAAATCTGGCAGATGGATGTTACACATATAGCAGCCTTTGGCAAACTCAGCTATGTTCATGTGACTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR TCA 72 bp TCGGACAGATTTACAGGAATCTATAATCCAGGAATGTaGCCTAGAATTATTAGGGTGGATATGCTGTGTGTT +
Preference number: 3 (lower is better)
Translates to: SDRFTGIYNPGM*PRIIRVDMLCV
Trigger: AACACACAGCATATCCACCCTAATAATTCTAGGTCACATTCCTGGATTATAGATTCCTGTAAATCTGTCCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CCA 72 bp ATTGGGTGCAGCCAATTAATGTCCCCTGATAATTGTTaGAAATCATTCAAAGTTTGTAATCTGTCCCTACAG +
Preference number: 3 (lower is better)
Translates to: IGCSQLMSPDNC*KSFKVCNLSLQ
Trigger: CTGTAGGGACAGATTACAAACTTTGAATGATTTCCAACAATTATCAGGGGACATTAATTGGCTGCACCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CCA 72 bp AGCCATTCTAATACTATTACAGATTTGTGTATGAATTaGCCTAAAAGTCCTGTTGGAGAATGGGAGGTAGGA +
Preference number: 3 (lower is better)
Translates to: SHSNTITDLCMN*PKSPVGEWEVG
Trigger: TCCTACCTCCCATTCTCCAACAGGACTTTTAGGCCAATTCATACACAAATCTGTAATAGTATTAGAATGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR GCA 72 bp ATTGCCAATAGTTTAATTTGTAAGTCTCATATCCTATaGCGTAAGCAAATCTTCACCCCAGTTTTCCACATC +
Preference number: 3 (lower is better)
Translates to: IANSLICKSHIL*RKQIFTPVFHI
Trigger: GATGTGGAAAACTGGGGTGAAGATTTGCTTACGGCATAGGATATGAGACTTACAAATTAAACTATTGGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR GCA 72 bp CTTTATTGTTTCAGTATGCTTAGGTCCATAAATAGCTaGACAGCCTTTAGAAGAGTCATCAGTAAAATAGGT +
Preference number: 3 (lower is better)
Translates to: LYCFSMLRSINS*TAFRRVISKIG
Trigger: ACCTATTTTACTGATGACTCTTCTAAAGGCTGTGCAGCTATTTATGGACCTAAGCATACTGAAACAATAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp CCGCCCGCTTCAGCCTCCCAAAGTGGTGAGAATAACAGGTGTCAGCCACCACGCGACCCGCCTCTGAGCTaGGAGAACACAGCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: PPASASQSGENNRCQPPRDPPLS*ENTARP
Trigger: GGGACGCGCTGTGTTCTCGCAGCTCAGAGGCGGGTC...GCGTGGTGGCTGACACCTGTTATTCTCACCACTTTGGGAGGCTGAAGCGGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR TCA 90 bp CCCGCTTCAGCCTCCCAAAGTGGTGAGAATAACAGGTGTCAGCCACCACGCCTGCGGAGCCTGTGGCGGTaGGACAACGACCGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PASASQSGENNRCQPPRLRSLWR*DNDRGK
Trigger: CTTTCCTCGGTCGTTGTCTCACCGCCACAGGCTCCG...CAGGCGTGGTGGCTGACACCTGTTATTCTCACCACTTTGGGAGGCTGAAGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
3UTR CAA 72 bp TGCAACGCCAGGGACAGGCTGGCAAGTGGGGTAGGCTaGCGCAATAGCTCAAGCCTGGCTGCAAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: CNARDRLASGVG*RNSSSLAARQM
Trigger: CATCTGCCTTGCAGCCAGGCTTGAGCTATTGCGCAAGCCTACCCCACTTGCCAGCCTGTCCCTGGCGTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp CAGTGGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTCGACCCGCCTCTGAGCTaGGAGAACACAGCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: QWRDLSSPQTLPPRFMPFDPPLS*ENTARP
Trigger: GGGACGCGCTGTGTTCTCGCAGCTCAGAGGCGGGTC...GAATGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR GCA 90 bp ACTGGAGGAGCTGGGCCCACAGTTGAGATCCATGGATTTCTCCAGTCTCCCGTTGACCCGCCTCTGAGCTaGGAGAACACAGCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: TGGAGPTVEIHGFLQSPVDPPLS*ENTARP
Trigger: GGGACGCGCTGTGTTCTCGCAGCTCAGAGGCGGGTC...AACGGGAGACTGGAGAAATCCATGGATCTCAACTGTGGGCCCAGCTCCTCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR GCA 90 bp CCGCCCGCTTCAGCCTCCCAAAGTGGTGAGAATAACAGGTGTCAGCCACCACGCACTCTGCTCAGCAGCTaGCTCAGCCTTGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PPASASQSGENNRCQPPRTLLSS*LSLGSL
Trigger: CAAGGAGCCAAGGCTGAGGCAGCTGCTGAGCAGAGT...GCGTGGTGGCTGACACCTGTTATTCTCACCACTTTGGGAGGCTGAAGCGGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR GCA 90 bp CCGCCCGCTTCAGCCTCCCAAAGTGGTGAGAATAACAGGTGTCAGCCACCACGCTCACCCAGTCTGGAGTaGAGTGGCGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PPASASQSGENNRCQPPRSPSLE*SGVISA
Trigger: AGCTGAGATCACGCCACTGCACTCCAGACTGGGTGA...GCGTGGTGGCTGACACCTGTTATTCTCACCACTTTGGGAGGCTGAAGCGGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR TCA 90 bp TGGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTCTTCCGGAGCCTGTGGCGGTaGGACAACGACCGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: WRDLSSPQTLPPRFMPFFRSLWR*DNDRGK
Trigger: CTTTCCTCGGTCGTTGTCTCACCGCCACAGGCTCCG...GAAGAATGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR GCA 90 bp CCGCCCGCTTCAGCCTCCCAAAGTGGTGAGAATAACAGGTGTCAGCCACCACGCTGCCTCCTAGGTTCATaGCATTCTTCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PPASASQSGENNRCQPPRCLLGS*HSSASA
Trigger: GGCTGAGGCAGAAGAATGGCATGAACCTAGGAGGCA...GCGTGGTGGCTGACACCTGTTATTCTCACCACTTTGGGAGGCTGAAGCGGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR TCA 90 bp CAGTGGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTCTGGAGTGCAGTGGCGTaGTCTCGGCTCAATGCAACC +
Preference number: 4 (lower is better)
Translates to: QWRDLSSPQTLPPRFMPFWSAVA*SRLNAT
Trigger: GGTTGCATTGAGCCGAGATCACGCCACTGCACTCCA...GAATGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282292.9
CDS-3UTR GCA 90 bp CCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTGACCCGCCTCTGAGCTaGGAGAACACAGCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: PLPADLSWGFSFFWSVSLDPPLS*ENTARP
Trigger: GGGACGCGCTGTGTTCTCGCAGCTCAGAGGCGGGTC...AAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593916.5
ENST00000597061.1
ENST00000599847.5
CDS-3UTR GCA 90 bp CAGTGGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTCACTCTGCTCAGCAGCTaGCTCAGCCTTGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QWRDLSSPQTLPPRFMPFTLLSS*LSLGSL
Trigger: CAAGGAGCCAAGGCTGAGGCAGCTGCTGAGCAGAGT...GAATGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR GCA 90 bp AGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCCACACGGATTGTCCACACGTGGGGTATGACTaGCCTCAGCATTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLPFHGHTHLEGTHTDCPHVGYD*PQHSFW
Trigger: CCAGAAGGAATGCTGAGGGCAGTCATACCCCACGTG...TGGACAATCCGTGTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp TCCATGGATTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCAGGGAACAAGGGCCCTaGGCTTCTACAGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SMDFSSLPFHGHTHLEGTREQGP*ASTALC
Trigger: ACAAAGGGCTGTAGAAGCTCAGGGCCCTTGTTCCCT...GGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAATCCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp GTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGCTGGACCCGCCTCTGAGCTaGGAGAACACAGCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: VLSLHSDSTSSWLVLEELDPPLS*ENTARP
Trigger: GGGACGCGCTGTGTTCTCGCAGCTCAGAGGCGGGTC...CAGCTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR GCA 90 bp CCCGCTTCAGCCTCCCAAAGTGGTGAGAATAACAGGTGTCAGCCACCACGCCTGTCAGCCTTGGCTCCTTaGCAACTACCTCTCAGTATG +
Preference number: 4 (lower is better)
Translates to: PASASQSGENNRCQPPRLSALAP*QLPLSM
Trigger: CATACTGAGAGGTAGTTGGCAAGGAGCCAAGGCTGA...CAGGCGTGGTGGCTGACACCTGTTATTCTCACCACTTTGGGAGGCTGAAGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR GCA 90 bp CAGTGGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTCTCACCCAGTCTGGAGTaGAGTGGCGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QWRDLSSPQTLPPRFMPFSPSLE*SGVISA
Trigger: AGCTGAGATCACGCCACTGCACTCCAGACTGGGTGA...GAATGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR GCA 90 bp GGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTCTTCTTCACCCAAGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GVISAHRKLCLLGSCHSSSPKLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCTTGGGTGA...AGAAGAATGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282292.9
CDS-3UTR CCA 90 bp CACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTCGCGCTTTCCGGAGCTaGTCGCCGCAGCGAACAACC +
Preference number: 4 (lower is better)
Translates to: HCQQTCPGVSHSSGQFHFRAFRS*SPQRTT
Trigger: GGTTGTTCGCTGCGGCGACCAGCTCCGGAAAGCGCG...AAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593916.5
3UTR CAA 72 bp AGCTCATGGCTCGTACTGGAGGAGCTGGGCCCACAGTaGAGATCCATGGATTTCTCCAGTCTCCCGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SSWLVLEELGPQ*RSMDFSSLPFH
Trigger: ATGGAACGGGAGACTGGAGAAATCCATGGATCTCAACTGTGGGCCCAGCTCCTCCAGTACGAGCCATGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR TCA 90 bp ACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTCCGGAGCCTGTGGCGGTaGGACAACGACCGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: TASRLVLGFLILLVSFTFRSLWR*DNDRGK
Trigger: CTTTCCTCGGTCGTTGTCTCACCGCCACAGGCTCCG...GAAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593916.5
ENST00000597061.1
ENST00000599847.5
CDS-3UTR TCA 90 bp GACTCCAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCCGGAGCCTGTGGCGGTaGGACAACGACCGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: DSSRSLFCLCIQIQLAHGRSLWR*DNDRGK
Trigger: CTTTCCTCGGTCGTTGTCTCACCGCCACAGGCTCCG...GCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR TCA 90 bp ACTGGAGGAGCTGGGCCCACAGTTGAGATCCATGGATTTCTCCAGTCTCCCGTTAGCTGGGCCCACAGTTaGGATCCATGGATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TGGAGPTVEIHGFLQSPVSWAHS*DPWISP
Trigger: TGGAGAAATCCATGGATCTCAACTGTGGGCCCAGCT...AACGGGAGACTGGAGAAATCCATGGATCTCAACTGTGGGCCCAGCTCCTCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR TCA 90 bp ATGGATTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCCACAGCTGGGCCCACAGTTaGGATCCATGGATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: MDFSSLPFHGHTHLEGTHSWAHS*DPWISP
Trigger: TGGAGAAATCCATGGATCTCAACTGTGGGCCCAGCT...GTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR GCA 90 bp CAGTGGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTCTGCCTCCTAGGTTCATaGCATTCTTCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QWRDLSSPQTLPPRFMPFCLLGS*HSSASA
Trigger: GGCTGAGGCAGAAGAATGGCATGAACCTAGGAGGCA...GAATGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR CCA 90 bp AGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCCACACGGATTGTCCACCAGCAGACTTGTCCTaGGGTTTCTCATTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLPFHGHTHLEGTHTDCPPADLS*GFSFFW
Trigger: CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGG...TGGACAATCCGTGTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR TCA 90 bp TGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGCTGGGCCCACAGTGGGTTGATGTCAGTGTaGCTCCAGTCGGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: CIQIQLAHGSYWRSWAHSGLMSV*LQSVLV
Trigger: AACAAGGACCGACTGGAGTCACACTGACATCAACCC...ACTGTGGGCCCAGCTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR TCA 90 bp ATGGATTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCCACACCTCTTTAGGGCACTaGCCTTATATCCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: MDFSSLPFHGHTHLEGTHTSLGH*PYIHCQ
Trigger: CTGGCAGTGGATATAAGGTCAGTGCCCTAAAGAGGT...GTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAATCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp CAGTGGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTCTCAGCCTTGGCTCCTTaGCAACTACCTCTCAGTATG +
Preference number: 4 (lower is better)
Translates to: QWRDLSSPQTLPPRFMPFSALAP*QLPLSM
Trigger: CATACTGAGAGGTAGTTGGCAAGGAGCCAAGGCTGA...GAATGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR GCA 90 bp ACTGGAGGAGCTGGGCCCACAGTTGAGATCCATGGATTTCTCCAGTCTCCCGTTTCTCCTTATATCCACTaGCAGCAGACTTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TGGAGPTVEIHGFLQSPVSPYIH*QQTCPG
Trigger: CCCAGGACAAGTCTGCTGGCAGTGGATATAAGGAGA...AACGGGAGACTGGAGAAATCCATGGATCTCAACTGTGGGCCCAGCTCCTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597061.1
3UTR CAA 72 bp GACTGCCCTCAGCATTCCTTCTGGTGGCAGATGCAGTaGTCAGCTTGCCAGCATCCTGCATTCATGAGAACA +
Preference number: 4 (lower is better)
Translates to: DCPQHSFWWQMQ*SACQHPAFMRT
Trigger: TGTTCTCATGAATGCAGGATGCTGGCAAGCTGACAACTGCATCTGCCACCAGAAGGAATGCTGAGGGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp CCCGCTTCAGCCTCCCAAAGTGGTGAGAATAACAGGTGTCAGCCACCACGCCTGACGCCTGGCTGTTTCTaGTTTAAGTCAGGTCATATT +
Preference number: 4 (lower is better)
Translates to: PASASQSGENNRCQPPRLTPGCF*FKSGHI
Trigger: AATATGACCTGACTTAAAGCAGAAACAGCCAGGCGT...CAGGCGTGGTGGCTGACACCTGTTATTCTCACCACTTTGGGAGGCTGAAGCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR GCA 90 bp ACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTCACATCCTTCCATGGGTaGAACGCCAGGGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: TASRLVLGFLILLVSFTFTSFHG*NARDRL
Trigger: CAGCCTGTCCCTGGCGTTGCACCCATGGAAGGATGT...GAAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp AGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCCACACGGATTGTCCATATTACAAATACTGGTaGATTCCAGGGGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: SLPFHGHTHLEGTHTDCPYYKYW*IPGADS
Trigger: AGAGTCAGCCCCTGGAATTCACCAGTATTTGTAATA...TGGACAATCCGTGTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp CTGACCTTATATCCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGGTCCAAGGACAGGGGTaGGAATTATCAAAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LTLYPLPADLSWGFSFFWVQGQG*ELSKGA
Trigger: GGCTCCCTTTGATAATTCTCACCCCTGTCCTTGGAC...CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGGATATAAGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp GACTCCAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCACTGCACGTGGGGTATaGCTGCCCTCAGCATTCCTT +
Preference number: 4 (lower is better)
Translates to: DSSRSLFCLCIQIQLAHGTARGV*LPSAFL
Trigger: AAGGAATGCTGAGGGCAGTCATACCCCACGTGCAGT...GCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp CAGTGGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTCAGGCGCCCACCACCATaGCCAGTAAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: QWRDLSSPQTLPPRFMPFRRPPP*PVNFCI
Trigger: AATACAAAAATTTACTGGGCATGGTGGTGGGCGCCT...GAATGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR GCA 90 bp TGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGCTGGGCCCACAGTTGCGTGATAACCTCCTaGAGCAGCTTAGCTAGTGTT +
Preference number: 4 (lower is better)
Translates to: CIQIQLAHGSYWRSWAHSCVITS*SSLASV
Trigger: AACACTAGCTAAGCTGCTGCAGGAGGTTATCACGCA...ACTGTGGGCCCAGCTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp AGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCCACACGGATTGTCCAAAGTTTCGCCACCAGTaGCAGCAAAATTTATGCCAT +
Preference number: 4 (lower is better)
Translates to: SLPFHGHTHLEGTHTDCPKFRHQ*QQNLCH
Trigger: ATGGCATAAATTTTGCTGGCACTGGTGGCGAAACTT...TGGACAATCCGTGTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp TCCATGGATTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCTGGCAAAGCAGTGGGTaGAGGAGAAATATCAATGAC +
Preference number: 4 (lower is better)
Translates to: SMDFSSLPFHGHTHLEGTWQSSG*RRNIND
Trigger: GTCATTGATATTTCTCCTCCACCCACTGCTTTGCCA...GGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAATCCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp GACTCCAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCGGTTACATCCTTCCATaGGTGCAACGCCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: DSSRSLFCLCIQIQLAHGGYILP*VQRQGQ
Trigger: CTGTCCCTGGCGTTGCACCCATGGAAGGATGTAACC...GCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 72 bp ATTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTaGAGGGCACCCACACGGATTGTCCATCTCCTTATA +
Preference number: 4 (lower is better)
Translates to: ISPVSRSMVTHT*RAPTRIVHLLI
Trigger: TATAAGGAGATGGACAATCCGTGTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597061.1
CDS-3UTR TCA 90 bp AAGCAAACCCTCGTCCCCATATCAGTAAGTCTACCGGGCCTTTCCATTGTCCTTGTGAATTCCAGGGGCTaGCTCTTCAATATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KQTLVPISVSLPGLSIVLVNSRG*LFNMSC
Trigger: GCAGGACATATTGAAGAGTCAGCCCCTGGAATTCAC...AAGGACAATGGAAAGGCCCGGTAGACTTACTGATATGGGGACGAGGGTTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp AGATCCATGGATTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCTTATGCCATGAGGTCTaGTTCTCACTTCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: RSMDFSSLPFHGHTHLEGLCHEV*FSLLPS
Trigger: AGATGGGAGAAGTGAGAATCAGACCTCATGGCATAA...GCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAATCCATGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp CCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTGGAGTCAGGGGTTTTaGTCCAGCAGTTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PLPADLSWGFSFFWSVSLWSQGF*SSSFSA
Trigger: AGCTGAGAAACTGCTGGAGCAAAACCCCTGACTCCA...AAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR GCA 90 bp GCCACCAGTGCCAGCAAAATTTATGCCATGAGGTCTGATTCTCACTTCTCCCATTCTCTTGGAAATGCCTaGCAGGGATGGCAGACCTTG +
Preference number: 4 (lower is better)
Translates to: ATSASKIYAMRSDSHFSHSLGNA*QGWQTL
Trigger: CAAGGTCTGCCATCCCTGGCAGGCATTTCCAAGAGA...ATGGGAGAAGTGAGAATCAGACCTCATGGCATAAATTTTGCTGGCACTGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp CTGACCTTATATCCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGCAGCATTCCTTCTGGTaGCAGATGCAGTTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LTLYPLPADLSWGFSFFWQHSFW*QMQLSA
Trigger: AGCTGACAACTGCATCTGCCACCAGAAGGAATGCTG...CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGGATATAAGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp ACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTCGAGACAGGCTCCCTTTaGTTAACAGAAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: TASRLVLGFLILLVSFTFETGSL*LTEGTE
Trigger: CTCTGTGCCTTCTGTTAATCAAAGGGAGCCTGTCTC...GAAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp AGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCCACACGGATTGTCCAGTGAGCTGTAAAACTTaGATAACTGCCACTAATTCT +
Preference number: 4 (lower is better)
Translates to: SLPFHGHTHLEGTHTDCPVSCKT*ITATNS
Trigger: AGAATTAGTGGCAGTTATTCAAGTTTTACAGCTCAC...TGGACAATCCGTGTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp ACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTCTGGCTGCAAGGCAGATaGAACATACGAGTAAGGGCA +
Preference number: 4 (lower is better)
Translates to: TASRLVLGFLILLVSFTFWLQGR*NIRVRA
Trigger: TGCCCTTACTCGTATGTTTCATCTGCCTTGCAGCCA...GAAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp ACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTCGTGATGCATCCTGGGTaGCACATAAAGAAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TASRLVLGFLILLVSFTFVMHPG*HIKKSL
Trigger: GAGGGACTTCTTTATGTGTCACCCAGGATGCATCAC...GAAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp TGTGACTCCAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATCTTCTCCCATCTAAATaGCCATGGGGACCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: CDSSRSLFCLCIQIQLAHLLPSK*PWGPQS
Trigger: CGACTGGGGTCCCCATGGTCATTTAGATGGGAGAAG...ATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp AGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCCACACGGATTGTCCAGTGTTAATTTTATTTTaGAGCATCCATTCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: SLPFHGHTHLEGTHTDCPVLILF*SIHSWS
Trigger: CGACCAGGAATGGATGCTTCAAAATAAAATTAACAC...TGGACAATCCGTGTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp GGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTCTTCTACGCCTGGCTGTTTCTaGTTTAAGTCAGGTCATATT +
Preference number: 4 (lower is better)
Translates to: GVISAHRKLCLLGSCHSSTPGCF*FKSGHI
Trigger: AATATGACCTGACTTAAAGCAGAAACAGCCAGGCGT...AGAAGAATGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR GCA 90 bp CTGACCTTATATCCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGATGCAGTTGTCAGCTTaGCAGCATCCTGCATTCATG +
Preference number: 4 (lower is better)
Translates to: LTLYPLPADLSWGFSFFWMQLSA*QHPAFM
Trigger: CATGAATGCAGGATGCTGGCAAGCTGACAACTGCAT...CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGGATATAAGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp ACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTCCCAGCAGACTTGTCCTaGGGTTTCTCATTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TASRLVLGFLILLVSFTFPADLS*GFSFFW
Trigger: CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGG...GAAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593916.5
ENST00000597061.1
ENST00000599847.5
3UTR CAA 72 bp CCACGCCTGGCTGTTTCTGCTTTAAGTCAGGTCATATaGATTCAGCGACAGTCTAAGGCCTTTCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: PRLAVSALSQVI*IQRQSKAFLQS
Trigger: AGACTGGAGAAAGGCCTTAGACTGTCGCTGAATCAATATGACCTGACTTAAAGCAGAAACAGCCAGGCGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
3UTR CAA 72 bp CAAAGGTGGGCTAAAGCCCATTCTGTGCCAAGCAAGTaGTGTAGCAGATTGGGATGTAGCGAAGAGATGTTC +
Preference number: 4 (lower is better)
Translates to: QRWAKAHSVPSK*CSRLGCSEEMF
Trigger: GAACATCTCTTCGCTACATCCCAATCTGCTACACAACTTGCTTGGCACAGAATGGGCTTTAGCCCACCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 72 bp CTCCTGAATTGGACCTCTCTTTCCTTGATAATGCCATaGAGGCAAAGGTGGGCTAAAGCCCATTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LLNWTSLSLIMP*RQRWAKAHSVP
Trigger: TGGCACAGAATGGGCTTTAGCCCACCTTTGCCTCAATGGCATTATCAAGGAAAGAGAGGTCCAATTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp CTGACCTTATATCCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGACTAATTCTGAGCATTaGGCTGAAACTCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LTLYPLPADLSWGFSFFWTNSEH*AETPEV
Trigger: GACCTCTGGAGTTTCAGCTCAATGCTCAGAATTAGT...CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGGATATAAGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp ACTGGAGGAGCTGGGCCCACAGTTGAGATCCATGGATTTCTCCAGTCTCCCGTTATGCATTGTAATGTTTaGTGTGCCCACTCTATGATT +
Preference number: 4 (lower is better)
Translates to: TGGAGPTVEIHGFLQSPVMHCNV*CAHSMI
Trigger: AATCATAGAGTGGGCACATCAAACATTACAATGCAT...AACGGGAGACTGGAGAAATCCATGGATCTCAACTGTGGGCCCAGCTCCTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp ATGGATTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCCACTTATTAGGGTGGATATaGTGTGTGTTTGTATTGTGC +
Preference number: 4 (lower is better)
Translates to: MDFSSLPFHGHTHLEGTHLLGWI*CVFVLC
Trigger: GCACAATACAAACACACAGCATATCCACCCTAATAA...GTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAATCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp TGTGACTCCAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATAAGAGGCCAGTCTCTTaGAAATGCCTGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: CDSSRSLFCLCIQIQLAHKRPVS*KCLPGM
Trigger: CATCCCTGGCAGGCATTTCCAAGAGACTGGCCTCTT...ATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp CTGACCTTATATCCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGGCATCACAAATCGATTaGGCATTGTTTACCCGGAGT +
Preference number: 4 (lower is better)
Translates to: LTLYPLPADLSWGFSFFWASQID*ALFTRS
Trigger: ACTCCGGGTAAACAATGCCCAATCGATTTGTGATGC...CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGGATATAAGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp TCCATGGATTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCAAAACTCCCTGTAAATaGGCCTTTACAAAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SMDFSSLPFHGHTHLEGTKTPCK*AFTKFL
Trigger: AAGGAACTTTGTAAAGGCCCATTTACAGGGAGTTTT...GGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAATCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp CTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGGTGGCATGTTGTTGCTaGAGCATCTGTTCTACAAGC +
Preference number: 4 (lower is better)
Translates to: LVLSLHSDSTSSWLVLEEVACCC*SICSTS
Trigger: GCTTGTAGAACAGATGCTTCAGCAACAACATGCCAC...CTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp CTGACCTTATATCCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGGTGGCAGTCTCAATGTaGCTGGCTACATTTACAATA +
Preference number: 4 (lower is better)
Translates to: LTLYPLPADLSWGFSFFWVAVSM*LATFTI
Trigger: TATTGTAAATGTAGCCAGTCACATTGAGACTGCCAC...CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGGATATAAGGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp ACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTCCATATGGGCAAAAGGTaGCAGACAATGTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: TASRLVLGFLILLVSFTFHMGKR*QTMSSD
Trigger: GTCTGATGACATTGTCTGTCACCTTTTGCCCATATG...GAAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp CACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTTGCTGTCTTCCATATTaGCTCCTGAATTGGACCTCT +
Preference number: 4 (lower is better)
Translates to: HCQQTCPGVSHSSGQFHFCCLPY*LLNWTS
Trigger: AGAGGTCCAATTCAGGAGTCAATATGGAAGACAGCA...AAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp TGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGCTGGGCCCACAGTTATAATCCAGGAATGTaGCCTAGAATTATTAGGGTG +
Preference number: 4 (lower is better)
Translates to: CIQIQLAHGSYWRSWAHSYNPGM*PRIIRV
Trigger: CACCCTAATAATTCTAGGTCACATTCCTGGATTATA...ACTGTGGGCCCAGCTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp CCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTATAAGTTTTTGCCTCTaGACAGGGAAAACATACCGC +
Preference number: 4 (lower is better)
Translates to: PLPADLSWGFSFFWSVSLISFCL*TGKTYR
Trigger: GCGGTATGTTTTCCCTGTGCAGAGGCAAAAACTTAT...AAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR GCA 90 bp CTGAATTGGACCTCTCTTTCCTTGATAATGCCATTGAGGCAAAGGTGGGCTAAAAGTCGACATTTCCCATaGTGTGGCCTGTTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LNWTSLSLIMPLRQRWAKSRHFP*CGLLLG
Trigger: TCCCAACAACAGGCCACAGCATGGGAAATGTCGACT...TTTAGCCCACCTTTGCCTCAATGGCATTATCAAGGAAAGAGAGGTCCAATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp CTGAATTGGACCTCTCTTTCCTTGATAATGCCATTGAGGCAAAGGTGGGCTAAATGCTTGGGACTGAATTaGAAGGCAACTGCGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LNWTSLSLIMPLRQRWAKCLGLN*KATAVE
Trigger: CTCAACCGCAGTTGCCTTGCAATTCAGTCCCAAGCA...TTTAGCCCACCTTTGCCTCAATGGCATTATCAAGGAAAGAGAGGTCCAATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp TGTGACTCCAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATCCAGCAGACTTGTCCTaGGGTTTCTCATTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: CDSSRSLFCLCIQIQLAHPADLS*GFSFFW
Trigger: CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGG...ATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR CCA 90 bp ACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTCAAGAGTGTCTGTCTGTaGAAACCATGGGTTATGCGT +
Preference number: 4 (lower is better)
Translates to: TASRLVLGFLILLVSFTFKSVCL*KPWVMR
Trigger: ACGCATAACCCATGGTTTCCACAGACAGACACTCTT...GAAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp CTGAATTGGACCTCTCTTTCCTTGATAATGCCATTGAGGCAAAGGTGGGCTAAAGTGGCTGTAACCAGGTaGCATGTTGTTGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LNWTSLSLIMPLRQRWAKVAVTR*HVVAEA
Trigger: TGCTTCAGCAACAACATGCCACCTGGTTACAGCCAC...TTTAGCCCACCTTTGCCTCAATGGCATTATCAAGGAAAGAGAGGTCCAATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp CACTCTAGTGGCAAAGCAGTGGGTGGAGGAGAAATATCAATGACCCACATCAGAACAATCAATACAATTTaGGTGATGGGGCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: HSSGKAVGGGEISMTHIRTINTI*VMGPGV
Trigger: CACTCCTGGCCCCATCACCCAAATTGTATTGATTGT...TCTGATGTGGGTCATTGATATTTCTCCTCCACCCACTGCTTTGCCACTAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp CTGAATTGGACCTCTCTTTCCTTGATAATGCCATTGAGGCAAAGGTGGGCTAAACCATTGAGGCAAAGGTaGGCTAAAGCCCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: LNWTSLSLIMPLRQRWAKPLRQR*AKAHSV
Trigger: CACAGAATGGGCTTTAGCCCACCTTTGCCTCAATGG...TTTAGCCCACCTTTGCCTCAATGGCATTATCAAGGAAAGAGAGGTCCAATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp ACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTCATTGAGCTGTTTGAATaGAGCTGTGCAGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: TASRLVLGFLILLVSFTFIELFE*SCAVLL
Trigger: CAGTAGCACTGCACAGCTCCATTCAAACAGCTCAAT...GAAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 72 bp CCATGCAGTCGACATTTCCCATGCTGTGGCCTGTTGTaGGGAATCCAAGGGAACAATAATTTTGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: PCSRHFPCCGLL*GIQGNNNFVWI
Trigger: GATCCAGACAAAATTATTGTTCCCTTGGATTCCCAACAACAGGCCACAGCATGGGAAATGTCGACTGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 72 bp TTGCCATGCAGTCGACATTTCCCATGCTGTGGCCTGTaGTTGGGAATCCAAGGGAACAATAATTTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LPCSRHFPCCGL*LGIQGNNNFVW
Trigger: CCAGACAAAATTATTGTTCCCTTGGATTCCCAACAACAGGCCACAGCATGGGAAATGTCGACTGCATGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 72 bp GTCAGCTTGCCAGCATCCTGCATTCATGAGAACAGTTaGCTGTTTGCTCATATAGCCTCCAGTGGTATACTG +
Preference number: 4 (lower is better)
Translates to: VSLPASCIHENS*LFAHIASSGIL
Trigger: CAGTATACCACTGGAGGCTATATGAGCAAACAGCAAACTGTTCTCATGAATGCAGGATGCTGGCAAGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp AATGACAATGCAATTGCTGCTGCAACTTCAGGCTTTGTATTTGTTATCCTAGCCGGGTTGATGTCAGTGTaGCTCCAGTCGGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: NDNAIAAATSGFVFVILAGLMSV*LQSVLV
Trigger: AACAAGGACCGACTGGAGTCACACTGACATCAACCC...GGCTAGGATAACAAATACAAAGCCTGAAGTTGCAGCAGCAATTGCATTGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp GATCTATTACTACAAGAGGCCAGTCTCTTGGAAATGCCTGCCAGGGATGGCAGAGAAGATTGGGCTTGTTaGAATACAGAACCGATTAGT +
Preference number: 4 (lower is better)
Translates to: DLLLQEASLLEMPARDGREDWAC*NTEPIS
Trigger: ACTAATCGGTTCTGTATTTCAACAAGCCCAATCTTC...TCTGCCATCCCTGGCAGGCATTTCCAAGAGACTGGCCTCTTGTAGTAATAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp GATCTATTACTACAAGAGGCCAGTCTCTTGGAAATGCCTGCCAGGGATGGCAGAAAGTCTCATATCCTATaGCGTAAGCAAATCTTCACC +
Preference number: 4 (lower is better)
Translates to: DLLLQEASLLEMPARDGRKSHIL*RKQIFT
Trigger: GGTGAAGATTTGCTTACGGCATAGGATATGAGACTT...TCTGCCATCCCTGGCAGGCATTTCCAAGAGACTGGCCTCTTGTAGTAATAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp CTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGATACCTAGCATTGGGTaGAGCCAATTAATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LVLSLHSDSTSSWLVLEEIPSIG*SQLMSP
Trigger: AGGGGACATTAATTGGCTGCACCCAATGCTAGGTAT...CTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp ACAGATTTGTGTATGAATTGGCCTAAAAGTCCTGTTGGAGAATGGGAGGTAGGAAGGCTCCCTAAACCTTaGTGGAATTCTGCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: TDLCMNWPKSPVGEWEVGRLPKP*WNSAQA
Trigger: AGCTTGGGCAGAATTCCAGCAAGGTTTAGGGAGCCT...TCCTACCTCCCATTCTCCAACAGGACTTTTAGGCCAATTCATACACAAATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp TTTCCCTCTAACATTTGCCAATGTCATTCTGCCAGAGTCTTAATATCCATACCACCTTCTGGTGGCAGATaGAGTTGTCAGCTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: FPSNICQCHSARVLISIPPSGGR*SCQLAS
Trigger: GCTGGCAAGCTGACAACTGCATCTGCCACCAGAAGG...TGGTATGGATATTAAGACTCTGGCAGAATGACATTGGCAAATGTTAGAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp CTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGATAGGTCTGTCTGCCTaGAATAGGCTTGTGATGAGT +
Preference number: 4 (lower is better)
Translates to: LVLSLHSDSTSSWLVLEEIGLSA*NRLVMS
Trigger: ACTCATCACAAGCCTATTCCAGGCAGACAGACCTAT...CTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp TGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGCTGGGCCCACAGTCTAGAATTATTAGGGTaGATATGCTGTGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: CIQIQLAHGSYWRSWAHSLELLG*ICCVFV
Trigger: TACAAACACACAGCATATCCACCCTAATAATTCTAG...ACTGTGGGCCCAGCTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 72 bp AGGCAGATGAAACATACGAGTAAGGGCAGAGGTGTTTaGATGCAGGAATGCATGAGAAGATTGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RQMKHTSKGRGV*MQECMRRLGLL
Trigger: CAACAAGCCCAATCTTCTCATGCATTCCTGCATCAAAACACCTCTGCCCTTACTCGTATGTTTCATCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 72 bp AAGGTAATTGCAGGCTGTGCAGCTCTCAATTGCCGGTaGGTGGTCCAGCTGATTTTACAGACTATGAACAAA +
Preference number: 4 (lower is better)
Translates to: KVIAGCAALNCR*VVQLILQTMNK
Trigger: TTTGTTCATAGTCTGTAAAATCAGCTGGACCACCAACCGGCAATTGAGAGCTGCACAGCCTGCAATTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp CTGAATTGGACCTCTCTTTCCTTGATAATGCCATTGAGGCAAAGGTGGGCTAAAAGCATCCTGCATTCATaGGAACAGTTTGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LNWTSLSLIMPLRQRWAKSILHS*EQFAVC
Trigger: GCAAACAGCAAACTGTTCTCATGAATGCAGGATGCT...TTTAGCCCACCTTTGCCTCAATGGCATTATCAAGGAAAGAGAGGTCCAATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp ACAGATTTGTGTATGAATTGGCCTAAAAGTCCTGTTGGAGAATGGGAGGTAGGAGGTTGGTCAGCTGCTTaGTTTATCACAGGCTCACAT +
Preference number: 4 (lower is better)
Translates to: TDLCMNWPKSPVGEWEVGGWSAA*FITGSH
Trigger: ATGTGAGCCTGTGATAAATCAAGCAGCTGACCAACC...TCCTACCTCCCATTCTCCAACAGGACTTTTAGGCCAATTCATACACAAATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp CCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTCCTTGTTCTGTCTTTaGATTCAGATTCAACTAGCT +
Preference number: 4 (lower is better)
Translates to: PLPADLSWGFSFFWSVSLSLFCL*IQIQLA
Trigger: AGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGA...AAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR GCA 90 bp CTGAATTGGACCTCTCTTTCCTTGATAATGCCATTGAGGCAAAGGTGGGCTAAATCTGTGAGAGTGATTTaGCATGCAGTCGACATTTCC +
Preference number: 4 (lower is better)
Translates to: LNWTSLSLIMPLRQRWAKSVRVI*HAVDIS
Trigger: GGAAATGTCGACTGCATGGCAAATCACTCTCACAGA...TTTAGCCCACCTTTGCCTCAATGGCATTATCAAGGAAAGAGAGGTCCAATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp CTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGGTTTTGATGCAGGAATaGATGAGAAGATTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LVLSLHSDSTSSWLVLEEVLMQE*MRRLGL
Trigger: CAAGCCCAATCTTCTCATGCATTCCTGCATCAAAAC...CTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp CACTCTAGTGGCAAAGCAGTGGGTGGAGGAGAAATATCAATGACCCACATCAGATTGAATAAAGGTAATTaGAGGCTGTGCAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: HSSGKAVGGGEISMTHIRLNKGN*RLCSSQ
Trigger: TTGAGAGCTGCACAGCCTGCAATTACCTTTATTCAA...TCTGATGTGGGTCATTGATATTTCTCCTCCACCCACTGCTTTGCCACTAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp TGTGACTCCAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATCTAGTGGCAAAGCAGTaGGTGGAGGAGAAATATCAA +
Preference number: 4 (lower is better)
Translates to: CDSSRSLFCLCIQIQLAHLVAKQ*VEEKYQ
Trigger: TTGATATTTCTCCTCCACCCACTGCTTTGCCACTAG...ATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 72 bp AGGACTGTTAAGCACGCCTTGGGGCAAAACTTTCCATaGATAACAAGAGACAGGCTCCCTTTGATTAACAGA +
Preference number: 4 (lower is better)
Translates to: RTVKHALGQNFP*ITRDRLPLINR
Trigger: TCTGTTAATCAAAGGGAGCCTGTCTCTTGTTATCAATGGAAAGTTTTGCCCCAAGGCGTGCTTAACAGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp GACTCCAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCTCCTTGTTCTGTCTTTaGATTCAGATTCAACTAGCT +
Preference number: 4 (lower is better)
Translates to: DSSRSLFCLCIQIQLAHGSLFCL*IQIQLA
Trigger: AGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGA...GCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR CCA 90 bp AATGACAATGCAATTGCTGCTGCAACTTCAGGCTTTGTATTTGTTATCCTAGCCGCTGTTTCCCCAGTTTaGCACGTGACATGTAGCATA +
Preference number: 4 (lower is better)
Translates to: NDNAIAAATSGFVFVILAAVSPV*HVTCSI
Trigger: TATGCTACATGTCACGTGCCAAACTGGGGAAACAGC...GGCTAGGATAACAAATACAAAGCCTGAAGTTGCAGCAGCAATTGCATTGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 72 bp GTTATCTATTATTCCTACAAAATCTGTGAGAGTGATTaGCCATGCAGTCGACATTTCCCATGCTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VIYYSYKICESD*PCSRHFPCCGL
Trigger: CAGGCCACAGCATGGGAAATGTCGACTGCATGGCAAATCACTCTCACAGATTTTGTAGGAATAATAGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp CTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGTGGGTTAGGAATATATaGCCAATAAGTTTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LVLSLHSDSTSSWLVLEEWVRNI*PISFCL
Trigger: GAGGCAAAAACTTATTGGGCATATATTCCTAACCCA...CTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR GCA 90 bp CTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGTTCCTAAGCCTTGTCTaGTCTGATATCTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: LVLSLHSDSTSSWLVLEEFLSLV*SDISFS
Trigger: AGAAAATGAGATATCAGAGCAGACAAGGCTTAGGAA...CTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp GACTCCAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCCCTTTTCTATCTGTTTaGCCAGTTATTGATATAGGA +
Preference number: 4 (lower is better)
Translates to: DSSRSLFCLCIQIQLAHGPFLSV*PVIDIG
Trigger: TCCTATATCAATAACTGGGCAAACAGATAGAAAAGG...GCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp AATGACAATGCAATTGCTGCTGCAACTTCAGGCTTTGTATTTGTTATCCTAGCCCTAAAGCCCATTCTGTaGCAAGCAAGTTGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: NDNAIAAATSGFVFVILALKPIL*QASCVA
Trigger: TGCTACACAACTTGCTTGGCACAGAATGGGCTTTAG...GGCTAGGATAACAAATACAAAGCCTGAAGTTGCAGCAGCAATTGCATTGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp TTTCCCTCTAACATTTGCCAATGTCATTCTGCCAGAGTCTTAATATCCATACCAACATTTCCCATGCTGTaGCCTGTTGTTGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: FPSNICQCHSARVLISIPTFPML*PVVGNP
Trigger: TGGATTCCCAACAACAGGCCACAGCATGGGAAATGT...TGGTATGGATATTAAGACTCTGGCAGAATGACATTGGCAAATGTTAGAGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp AATGACAATGCAATTGCTGCTGCAACTTCAGGCTTTGTATTTGTTATCCTAGCCATGGTAACTCAAGCATaGTTGGGACTGAATTGCAAG +
Preference number: 4 (lower is better)
Translates to: NDNAIAAATSGFVFVILAMVTQA*LGLNCK
Trigger: CTTGCAATTCAGTCCCAAGCATGCTTGAGTTACCAT...GGCTAGGATAACAAATACAAAGCCTGAAGTTGCAGCAGCAATTGCATTGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp AATGACAATGCAATTGCTGCTGCAACTTCAGGCTTTGTATTTGTTATCCTAGCCAGTCCTGTTGGAGAATaGGAGGTAGGAAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: NDNAIAAATSGFVFVILASPVGE*EVGRIN
Trigger: GTTTATTCTTCCTACCTCCCATTCTCCAACAGGACT...GGCTAGGATAACAAATACAAAGCCTGAAGTTGCAGCAGCAATTGCATTGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp AATGACAATGCAATTGCTGCTGCAACTTCAGGCTTTGTATTTGTTATCCTAGCCAAATGTAATTTTGTTTaGGGTGGTAGCTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: NDNAIAAATSGFVFVILAKCNFV*GGSWSP
Trigger: AGGAGACCAGCTACCACCTCAAACAAAATTACATTT...GGCTAGGATAACAAATACAAAGCCTGAAGTTGCAGCAGCAATTGCATTGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp ACAGATTTGTGTATGAATTGGCCTAAAAGTCCTGTTGGAGAATGGGAGGTAGGATTGATACCATTGTTCTaGGAATCTAATCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: TDLCMNWPKSPVGEWEVGLIPLF*ESNHSL
Trigger: CAGAGAGTGATTAGATTCTCAGAACAATGGTATCAA...TCCTACCTCCCATTCTCCAACAGGACTTTTAGGCCAATTCATACACAAATCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp TTTCCCTCTAACATTTGCCAATGTCATTCTGCCAGAGTCTTAATATCCATACCATTCCATATTGACTCCTaGATTGGACCTCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FPSNICQCHSARVLISIPFHIDS*IGPLFP
Trigger: AGGAAAGAGAGGTCCAATTCAGGAGTCAATATGGAA...TGGTATGGATATTAAGACTCTGGCAGAATGACATTGGCAAATGTTAGAGGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp TTTCCTGTAGGGACTTTCCTAAGCCTTGTCTGCTCTGATATCTCATTTTCTTTAATAAGTTTTTGCCTCTaGACAGGGAAAACATACCGC +
Preference number: 4 (lower is better)
Translates to: FPVGTFLSLVCSDISFSLISFCL*TGKTYR
Trigger: GCGGTATGTTTTCCCTGTGCAGAGGCAAAAACTTAT...TAAAGAAAATGAGATATCAGAGCAGACAAGGCTTAGGAAAGTCCCTACAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR TCA 90 bp CCTTTGTATTTATTAGGTAGAATCAACAGGGAGGAAGAGGTAATGGTTGGTCAGGGAATTTCTGTTTTATaGGTGATTGCCCATAACTGT +
Preference number: 4 (lower is better)
Translates to: PLYLLGRINREEEVMVGQGISVL*VIAHNC
Trigger: ACAGTTATGGGCAATCACTCATAAAACAGAAATTCC...CTGACCAACCATTACCTCTTCCTCCCTGTTGATTCTACCTAATAAATACAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CCA 90 bp CCTTTGTATTTATTAGGTAGAATCAACAGGGAGGAAGAGGTAATGGTTGGTCAGGATTTGTGTATGAATTaGCCTAAAAGTCCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: PLYLLGRINREEEVMVGQDLCMN*PKSPVG
Trigger: TCCAACAGGACTTTTAGGCCAATTCATACACAAATC...CTGACCAACCATTACCTCTTCCTCCCTGTTGATTCTACCTAATAAATACAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 72 bp GTGGCCTGTTGTTGGGAATCCAAGGGAACAATAATTTaGTCTGGATCACATCCCATAAACATTTTTGATCTA +
Preference number: 4 (lower is better)
Translates to: VACCWESKGTII*SGSHPINIFDL
Trigger: TAGATCAAAAATGTTTATGGGATGTGATCCAGACAAAATTATTGTTCCCTTGGATTCCCAACAACAGGCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR GCA 90 bp TTTCCCTCTAACATTTGCCAATGTCATTCTGCCAGAGTCTTAATATCCATACCAACAGGCTCACATAATTaGTTTCTTTATACAACAGCC +
Preference number: 4 (lower is better)
Translates to: FPSNICQCHSARVLISIPTGSHN*FLYTTA
Trigger: GGCTGTTGTATAAAGAAAGCAATTATGTGAGCCTGT...TGGTATGGATATTAAGACTCTGGCAGAATGACATTGGCAAATGTTAGAGGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
3UTR CAA 72 bp TACACAAATATGAATAGGGTTAAAATGACAATGCAATaGCTGCTGCAACTTCAGGCTTTGTATTTGTTATCC +
Preference number: 4 (lower is better)
Translates to: YTNMNRVKMTMQ*LLQLQALYLLS
Trigger: GGATAACAAATACAAAGCCTGAAGTTGCAGCAGCAATTGCATTGTCATTTTAACCCTATTCATATTTGTGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp CCCGCTTCAGCCTCCCAAAGTGGTGAGAATAACAGGTGTCAGCCACCACGCCTGCTCAGCCTTGGCTCCTaGCCAACTACCTCTCAGTAT +
Preference number: 5 (lower is better)
Translates to: PASASQSGENNRCQPPRLLSLGS*PTTSQY
Trigger: ATACTGAGAGGTAGTTGGCAAGGAGCCAAGGCTGAG...CAGGCGTGGTGGCTGACACCTGTTATTCTCACCACTTTGGGAGGCTGAAGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR CAA 90 bp AGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCCACACGGATTGTCCATGGTGGCAGATGCAGTaGTCAGCTTGCCAGCATCCT +
Preference number: 5 (lower is better)
Translates to: SLPFHGHTHLEGTHTDCPWWQMQ*SACQHP
Trigger: AGGATGCTGGCAAGCTGACAACTGCATCTGCCACCA...TGGACAATCCGTGTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp ATGGATTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCCACGAGCTGGGCCCACAGTaGAGATCCATGGATTTCTCC +
Preference number: 5 (lower is better)
Translates to: MDFSSLPFHGHTHLEGTHELGPQ*RSMDFS
Trigger: GGAGAAATCCATGGATCTCAACTGTGGGCCCAGCTC...GTGGGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR CAA 90 bp GGCGTGATCTCAGCTCACCGCAAACTCTGCCTCCTAGGTTCATGCCATTCTTCTCTCAGCCTTGGCTCCTaGCCAACTACCTCTCAGTAT +
Preference number: 5 (lower is better)
Translates to: GVISAHRKLCLLGSCHSSLSLGS*PTTSQY
Trigger: ATACTGAGAGGTAGTTGGCAAGGAGCCAAGGCTGAG...AGAAGAATGGCATGAACCTAGGAGGCAGAGTTTGCGGTGAGCTGAGATCACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR CAA 90 bp CCGCCCGCTTCAGCCTCCCAAAGTGGTGAGAATAACAGGTGTCAGCCACCACGCTTAAGTCAGGTCATATaGATTCAGCGACAGTCTAAG +
Preference number: 5 (lower is better)
Translates to: PPASASQSGENNRCQPPRLSQVI*IQRQSK
Trigger: CTTAGACTGTCGCTGAATCAATATGACCTGACTTAA...GCGTGGTGGCTGACACCTGTTATTCTCACCACTTTGGGAGGCTGAAGCGGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282292.9
ENST00000598770.5
CDS-3UTR CAA 90 bp CCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTGAGCTGGGCCCACAGTaGAGATCCATGGATTTCTCC +
Preference number: 5 (lower is better)
Translates to: PLPADLSWGFSFFWSVSLELGPQ*RSMDFS
Trigger: GGAGAAATCCATGGATCTCAACTGTGGGCCCAGCTC...AAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR CAA 90 bp CTGACCTTATATCCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGGGGCACCCACACGGATaGTCCATCTCCTGTAAAAAC +
Preference number: 5 (lower is better)
Translates to: LTLYPLPADLSWGFSFFWGHPHG*SISCKN
Trigger: GTTTTTACAGGAGATGGACAATCCGTGTGGGTGCCC...CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGGATATAAGGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp TGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGCTGGGCCCACAGTGTGCTGTCTTCCATATaGACTCCTGAATTGGACCTC +
Preference number: 5 (lower is better)
Translates to: CIQIQLAHGSYWRSWAHSVLSSI*TPELDL
Trigger: GAGGTCCAATTCAGGAGTCAATATGGAAGACAGCAC...ACTGTGGGCCCAGCTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp ACTGGAGGAGCTGGGCCCACAGTTGAGATCCATGGATTTCTCCAGTCTCCCGTTGTCCTTGTTCTGTCTTaGCATTCAGATTCAACTAGC +
Preference number: 5 (lower is better)
Translates to: TGGAGPTVEIHGFLQSPVVLVLS*HSDSTS
Trigger: GCTAGTTGAATCTGAATGCAAAGACAGAACAAGGAC...AACGGGAGACTGGAGAAATCCATGGATCTCAACTGTGGGCCCAGCTCCTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR CAA 90 bp CTGACCTTATATCCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGCCAGGTGGCATGTTGTaGCTGAAGCATCTGTTCTAC +
Preference number: 5 (lower is better)
Translates to: LTLYPLPADLSWGFSFFWPGGML*LKHLFY
Trigger: GTAGAACAGATGCTTCAGCAACAACATGCCACCTGG...CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGGATATAAGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp TCCATGGATTTCTCCAGTCTCCCGTTCCATGGTCACACACACCTTGAGGGCACCGGAGTTGGTCCTTTTTaGCTGCTAGAAAAACATACG +
Preference number: 5 (lower is better)
Translates to: SMDFSSLPFHGHTHLEGTGVGPF*LLEKHT
Trigger: CGTATGTTTTTCTAGCAGCAAAAAAGGACCAACTCC...GGTGCCCTCAAGGTGTGTGTGACCATGGAACGGGAGACTGGAGAAATCCATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp TGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGCTGGGCCCACAGTAAGGCAATGATACAGTaGACAGGCATCACAAATCGA +
Preference number: 5 (lower is better)
Translates to: CIQIQLAHGSYWRSWAHSKAMIQ*TGITNR
Trigger: TCGATTTGTGATGCCTGTCAACTGTATCATTGCCTT...ACTGTGGGCCCAGCTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp GACTCCAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCAAGGGCAGAGGTGTTTaGATGCAGGAATGCATGAGA +
Preference number: 5 (lower is better)
Translates to: DSSRSLFCLCIQIQLAHGKGRGV*MQECMR
Trigger: TCTCATGCATTCCTGCATCAAAACACCTCTGCCCTT...GCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp ACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTCGTAACTCAAGCATGCTaGGGACTGAATTGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: TASRLVLGFLILLVSFTFVTQAC*GLNCKA
Trigger: TGCCTTGCAATTCAGTCCCAAGCATGCTTGAGTTAC...GAAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp ACTGGAGGAGCTGGGCCCACAGTTGAGATCCATGGATTTCTCCAGTCTCCCGTTGGATATGCTGTGTGTTaGTATTGTGCTATGATTAAG +
Preference number: 5 (lower is better)
Translates to: TGGAGPTVEIHGFLQSPVGYAVC*YCAMIK
Trigger: CTTAATCATAGCACAATACAAACACACAGCATATCC...AACGGGAGACTGGAGAAATCCATGGATCTCAACTGTGGGCCCAGCTCCTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp CACTCTAGTGGCAAAGCAGTGGGTGGAGGAGAAATATCAATGACCCACATCAGATGGTTGGTCAGCTGCTaGATTTATCACAGGCTCACA +
Preference number: 5 (lower is better)
Translates to: HSSGKAVGGGEISMTHIRWLVSC*IYHRLT
Trigger: TGTGAGCCTGTGATAAATCAAGCAGCTGACCAACCA...TCTGATGTGGGTCATTGATATTTCTCCTCCACCCACTGCTTTGCCACTAGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp ATCTCCTTATATCCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGATGCCCAATAAGTTTTaGCCTCTGCACAGGGAAAAC +
Preference number: 5 (lower is better)
Translates to: ISLYPLPADLSWGFSFFWMPNKF*PLHREN
Trigger: GTTTTCCCTGTGCAGAGGCAAAAACTTATTGGGCAT...CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGGATATAAGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597061.1
CDS-3UTR CAA 90 bp GACTCCAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCATGCCCAATAAGTTTTaGCCTCTGCACAGGGAAAAC +
Preference number: 5 (lower is better)
Translates to: DSSRSLFCLCIQIQLAHGMPNKF*PLHREN
Trigger: GTTTTCCCTGTGCAGAGGCAAAAACTTATTGGGCAT...GCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS-3UTR CAA 90 bp CACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTGGGCAAAACTTTCCATaGATAACAAGAGACAGGCTC +
Preference number: 5 (lower is better)
Translates to: HCQQTCPGVSHSSGQFHFGQNFP*ITRDRL
Trigger: GAGCCTGTCTCTTGTTATCAATGGAAAGTTTTGCCC...AAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp TGTGACTCCAGTCGGTCCTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATCAAATCGATTGGGCATaGTTTACCCGGAGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: CDSSRSLFCLCIQIQLAHQIDWA*FTRSWS
Trigger: GGACCAACTCCGGGTAAACAATGCCCAATCGATTTG...ATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAGGACCGACTGGAGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp ATCTCCTTATATCCACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGGTCCTTGTTCTGTCTTaGCATTCAGATTCAACTAGC +
Preference number: 5 (lower is better)
Translates to: ISLYPLPADLSWGFSFFWVLVLS*HSDSTS
Trigger: GCTAGTTGAATCTGAATGCAAAGACAGAACAAGGAC...CCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTGGATATAAGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597061.1
CDS-3UTR CAA 90 bp ACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTCATTGTCAGTTTTTCATaGTGTAGGGACCCCCATATG +
Preference number: 5 (lower is better)
Translates to: TASRLVLGFLILLVSFTFIVSFS*CRDPHM
Trigger: CATATGGGGGTCCCTACACAATGAAAAACTGACAAT...GAAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp GATCTATTACTACAAGAGGCCAGTCTCTTGGAAATGCCTGCCAGGGATGGCAGAAGGCTAAATGTAATTTaGTTTGAGGTGGTAGCTGGT +
Preference number: 5 (lower is better)
Translates to: DLLLQEASLLEMPARDGRRLNVI*FEVVAG
Trigger: ACCAGCTACCACCTCAAACAAAATTACATTTAGCCT...TCTGCCATCCCTGGCAGGCATTTCCAAGAGACTGGCCTCTTGTAGTAATAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp CTTGTTCTGTCTTTGCATTCAGATTCAACTAGCTCATGGCTCGTACTGGAGGAGTACAATCAATACAATTaGGGTGATGGGGCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: LVLSLHSDSTSSWLVLEEYNQYN*GDGARS
Trigger: ACTCCTGGCCCCATCACCCAAATTGTATTGATTGTA...CTCCTCCAGTACGAGCCATGAGCTAGTTGAATCTGAATGCAAAGACAGAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp AAGCAAACCCTCGTCCCCATATCAGTAAGTCTACCGGGCCTTTCCATTGTCCTTTATGATTCCTTGTCCTaGAGGATTGTAAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: KQTLVPISVSLPGLSIVLYDSLS*RIVRNF
Trigger: GAAATTCCTTACAATCCTCAAGGACAAGGAATCATA...AAGGACAATGGAAAGGCCCGGTAGACTTACTGATATGGGGACGAGGGTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp CACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTATATTGACTCCTGAATaGGACCTCTCTTTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: HCQQTCPGVSHSSGQFHFILTPE*DLSFLD
Trigger: ATCAAGGAAAGAGAGGTCCAATTCAGGAGTCAATAT...AAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp CACTCTAGTGGCAAAGCAGTGGGTGGAGGAGAAATATCAATGACCCACATCAGACCAATTTTTCACACATaGAGCTGTTTGAATGGAGCT +
Preference number: 5 (lower is better)
Translates to: HSSGKAVGGGEISMTHIRPIFHT*SCLNGA
Trigger: AGCTCCATTCAAACAGCTCAATGTGTGAAAAATTGG...TCTGATGTGGGTCATTGATATTTCTCCTCCACCCACTGCTTTGCCACTAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp ACAGATTTGTGTATGAATTGGCCTAAAAGTCCTGTTGGAGAATGGGAGGTAGGATCCTTGATAATGCCATaGAGGCAAAGGTGGGCTAAA +
Preference number: 5 (lower is better)
Translates to: TDLCMNWPKSPVGEWEVGSLIMP*RQRWAK
Trigger: TTTAGCCCACCTTTGCCTCAATGGCATTATCAAGGA...TCCTACCTCCCATTCTCCAACAGGACTTTTAGGCCAATTCATACACAAATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp CACTGCCAGCAGACTTGTCCTGGGGTTTCTCATTCTTCTGGTCAGTTTCACTTTGCATTATTACTATTATaGGATAGTGTCCCAACCCAA +
Preference number: 5 (lower is better)
Translates to: HCQQTCPGVSHSSGQFHFALLLL*DSVPTQ
Trigger: TTGGGTTGGGACACTATCCAATAATAGTAATAATGC...AAAGTGAAACTGACCAGAAGAATGAGAAACCCCAGGACAAGTCTGCTGGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp ACAGATTTGTGTATGAATTGGCCTAAAAGTCCTGTTGGAGAATGGGAGGTAGGAAGAGGGCTGAAGCACTaGAGTCTGCTTATTCAAGTT +
Preference number: 5 (lower is better)
Translates to: TDLCMNWPKSPVGEWEVGRGLKH*SLLIQV
Trigger: AACTTGAATAAGCAGACTCAAGTGCTTCAGCCCTCT...TCCTACCTCCCATTCTCCAACAGGACTTTTAGGCCAATTCATACACAAATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS-3UTR CAA 90 bp ACAGATTTGTGTATGAATTGGCCTAAAAGTCCTGTTGGAGAATGGGAGGTAGGAAAGGGAACAATAATTTaGTCTGGATCACATCCCATA +
Preference number: 5 (lower is better)
Translates to: TDLCMNWPKSPVGEWEVGKGTII*SGSHPI
Trigger: TATGGGATGTGATCCAGACAAAATTATTGTTCCCTT...TCCTACCTCCCATTCTCCAACAGGACTTTTAGGCCAATTCATACACAAATCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599847.5
CDS CCA 72 bp CCTTCTTCACTCACGTCCCTGTTCGGGCGCCACTTGTaGCTGTCGGTTCGGGAAGAATATCTGAGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: PSSLTSLFGRHL*LSVREEYLSEE
Trigger: CTCCTCACTCAGATATTCTTCCCGAACCGACAGCCACAAGTGGCGCCCGAACAGGGACGTGAGTGAAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS CAA 72 bp AGACCTTCTTCACTCACGTCCCTGTTCGGGCGCCACTaGTGGCTGTCGGTTCGGGAAGAATATCTGAGTGAG +
Preference number: 6 (lower is better)
Translates to: RPSSLTSLFGRH*WLSVREEYLSE
Trigger: CTCACTCAGATATTCTTCCCGAACCGACAGCCACAAGTGGCGCCCGAACAGGGACGTGAGTGAAGAAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5
CDS GCA 72 bp CTGTCGGTTCGGGAAGAATATCTGAGTGAGGAGATTTaGCGACCTGTTACGCAGCCAAACTCTCAGTATGGC +
Preference number: 6 (lower is better)
Translates to: LSVREEYLSEEI*RPVTQPNSQYG
Trigger: GCCATACTGAGAGTTTGGCTGCGTAACAGGTCGGCAAATCTCCTCACTCAGATATTCTTCCCGAACCGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597061.1
ENST00000599847.5