RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF772 (Homo sapiens)

Ensembl gene IDs: ENSG00000197128

Ensembl transcript IDs: ENST00000343280.8, ENST00000356584.8, ENST00000425074.3, ENST00000427512.6, ENST00000450712.2, ENST00000600175.5, ENST00000601768.1, ENST00000610548.2, ENST00000615214.3

Found 452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCCGTGTTGTGTTCTTCTGTGCCTGGGCAGCACCAGGTTCCAATaGAGTCCCACACTCACTTCGTGCTCTCTTCTACAAGCACACAGA +
Preference number: 1 (lower is better)
Translates to: VPCCVLLCLGSTRFQ*SPTLTSCSLLQAHR
Trigger: TCTGTGTGCTTGTAGAAGAGAGCACGAAGTGAGTGTGGGACTGCATTGGAACCTGGTGCTGCCCAGGCACAGAAGAACACAACACGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600175.5
3UTR CCA 90 bp CTGAGACTCAGGTTCCTTTCACGGGGGTTGAAAGGAATTTGCTTCTaGCCCCAGGCTGGTGTAAATGCTGTCTCCATGGGCACAAGTAGA +
Preference number: 1 (lower is better)
Translates to: LRLRFLSRGLKGICF*PQAGVNAVSMGTSR
Trigger: TCTACTTGTGCCCATGGAGACAGCATTTACACCAGCCTGGGGCCAGAAGCAAATTCCTTTCAACCCCCGTGAAAGGAACCTGAGTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600175.5
3UTR CCA 90 bp GGGTTACTTTGGCACAAGGCAGGACTCTTCCAGCACAAAGACAGATaGCTTCTAACAGGCACTGCCTTGACGAAATTCCAGCAAGAGTCT +
Preference number: 1 (lower is better)
Translates to: GLLWHKAGLFQHKDR*LLTGTALTKFQQES
Trigger: AGACTCTTGCTGGAATTTCGTCAAGGCAGTGCCTGTTAGAAGCCATCTGTCTTTGTGCTGGAAGAGTCCTGCCTTGTGCCAAAGTAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR CCA 90 bp TTCACCTGCCCCTCTAAGTATTTTGCACAGGCTGGTTCCTGTGCCTaGAACAACCTTCCAACCTTATTCCAATGGTTGGCAGAAATGGAA +
Preference number: 1 (lower is better)
Translates to: FTCPSKYFAQAGSCA*NNLPTLFQWLAEME
Trigger: TTCCATTTCTGCCAACCATTGGAATAAGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATACTTAGAGGGGCAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450712.2
3UTR CCA 90 bp CTACAAGCACACAGATTTTTCTCTGCATGTTGGTCTGCCAAGGGATaGGAAAGGGGTGGTTTAAGCAATGCAAGACTACCTTTCCTACCC +
Preference number: 1 (lower is better)
Translates to: LQAHRFFSACWSAKG*ERGGLSNARLPFLP
Trigger: GGGTAGGAAAGGTAGTCTTGCATTGCTTAAACCACCCCTTTCCCATCCCTTGGCAGACCAACATGCAGAGAAAAATCTGTGTGCTTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
3UTR GCA 90 bp TGCATGTTGGTCTGCCAAGGGATGGGAAAGGGGTGGTTTAAGCAATaGAAGACTACCTTTCCTACCCACTTCAATGCCTTTCTTCTTGAT +
Preference number: 1 (lower is better)
Translates to: CMLVCQGMGKGWFKQ*KTTFPTHFNAFLLD
Trigger: ATCAAGAAGAAAGGCATTGAAGTGGGTAGGAAAGGTAGTCTTGCATTGCTTAAACCACCCCTTTCCCATCCCTTGGCAGACCAACATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
3UTR TCA 90 bp CTTGTAGTTAGATGCTGTCCTACAAAACACACTTCAGGGCCAGAGTaGCAGACAGACAACACACACACAGACAGATGTACATATAACTTG +
Preference number: 1 (lower is better)
Translates to: LVVRCCPTKHTSGPE*QTDNTHTDRCTYNL
Trigger: CAAGTTATATGTACATCTGTCTGTGTGTGTGTTGTCTGTCTGTCACTCTGGCCCTGAAGTGTGTTTTGTAGGACAGCATCTAACTACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR CCA 90 bp ATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATGCTTaGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACG +
Preference number: 1 (lower is better)
Translates to: IKFYFWLSATHKGYA*SFSLMSVIMLNKET
Trigger: CGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
3UTR GCA 90 bp ACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCTaGAGTTTTCTCATTCCTTTATTAATCTGGGTTTCTGCACCAACT +
Preference number: 1 (lower is better)
Translates to: TCGCTFRRVIFPIVC*SFLIPLLIWVSAPT
Trigger: AGTTGGTGCAGAAACCCAGATTAATAAAGGAATGAGAAAACTGCAGCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR TCA 90 bp GCAATGCAAGACTACCTTTCCTACCCACTTCAATGCCTTTCTTCTTaGTATTATGTTAAAATCAGGTACTCCGATCACTCATCTAGTTTT +
Preference number: 1 (lower is better)
Translates to: AMQDYLSYPLQCLSS*YYVKIRYSDHSSSF
Trigger: AAAACTAGATGAGTGATCGGAGTACCTGATTTTAACATAATATCAAGAAGAAAGGCATTGAAGTGGGTAGGAAAGGTAGTCTTGCATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
3UTR TCA 90 bp TGGTACACTATAAATATGTGCAGTTTATTGCAAAAATGTTTAGACTaGCTTCTGGACAGTAACCTTAGCCATAAGAGACACAGGTATGGA +
Preference number: 1 (lower is better)
Translates to: WYTINMCSLLQKCLD*LLDSNLSHKRHRYG
Trigger: TCCATACCTGTGTCTCTTATGGCTAAGGTTACTGTCCAGAAGTCAGTCTAAACATTTTTGCAATAAACTGCACATATTTATAGTGTACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp AGGAATTTGCTTCTGGCCCCAGGCTGGTGTAAATGCTGTCTCCATGGGCACAAGGTGTTCTTCTGTGCCTaGGCAGCACCAGGTTCCAAT +
Preference number: 2 (lower is better)
Translates to: RNLLLAPGWCKCCLHGHKVFFCA*AAPGSN
Trigger: ATTGGAACCTGGTGCTGCCCAGGCACAGAAGAACAC...CTTGTGCCCATGGAGACAGCATTTACACCAGCCTGGGGCCAGAAGCAAATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600175.5
3UTR-3UTR CCA 90 bp GGTTCCAATGCAGTCCCACACTCACTTCGTGCTCTCTTCTACAAGCACACAGATTGGTCTGCCAAGGGATaGGAAAGGGGTGGTTTAAGC +
Preference number: 2 (lower is better)
Translates to: GSNAVPHSLRALFYKHTDWSAKG*ERGGLS
Trigger: GCTTAAACCACCCCTTTCCCATCCCTTGGCAGACCA...ATCTGTGTGCTTGTAGAAGAGAGCACGAAGTGAGTGTGGGACTGCATTGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
3UTR-3UTR CCA 90 bp TGCTTCTGGCCCCAGGCTGGTGTAAATGCTGTCTCCATGGGCACAAGTAGAATTGGGATGGGAAAGGGGTaGTTTAAGCAATGCAAGACT +
Preference number: 2 (lower is better)
Translates to: CFWPQAGVNAVSMGTSRIGMGKG*FKQCKT
Trigger: AGTCTTGCATTGCTTAAACCACCCCTTTCCCATCCC...AATTCTACTTGTGCCCATGGAGACAGCATTTACACCAGCCTGGGGCCAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600175.5
3UTR CAA 90 bp AGTACACGAACACGTCCTCAAAGTTCACCTGCCCCTCTAAGTATTTaGCACAGGCTGGTTCCTGTGCCTGGAACAACCTTCCAACCTTAT +
Preference number: 2 (lower is better)
Translates to: STRTRPQSSPAPLSI*HRLVPVPGTTFQPY
Trigger: ATAAGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATACTTAGAGGGGCAGGTGAACTTTGAGGACGTGTTCGTGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450712.2
3UTR-3UTR CCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCGGAAACCTCTGCCAGTaGTCAGCAGAACAAAGCTCC +
Preference number: 2 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGGNLCQ*SAEQSS
Trigger: GGAGCTTTGTTCTGCTGACCACTGGCAGAGGTTTCC...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCCCTACCTGGGCCTTCTaGAGGACAGCCAATATCAAC +
Preference number: 2 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFPTWAF*RTANIN
Trigger: GTTGATATTGGCTGTCCTCCAGAAGGCCCAGGTAGG...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR CAA 90 bp GGGAATAGTACAGAGGTCTGTCTTTTGAAACACATTGGGGTTACTTaGGCACAAGGCAGGACTCTTCCAGCACAAAGACAGATGGCTTCT +
Preference number: 2 (lower is better)
Translates to: GNSTEVCLLKHIGVT*AQGRTLPAQRQMAS
Trigger: AGAAGCCATCTGTCTTTGTGCTGGAAGAGTCCTGCCTTGTGCCAAAGTAACCCCAATGTGTTTCAAAAGACAGACCTCTGTACTATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR CAA 90 bp GCCTCCCCTGTCACAAAAGACATCTCCATTGATTGCACAGCACAGTaGTTCAGAAGAAAGGGCCTGCTCTTATCACTTCTAAAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: ASPVTKDISIDCTAQ*FRRKGLLLSLLKGF
Trigger: GAAACCCTTTAGAAGTGATAAGAGCAGGCCCTTTCTTCTGAACAACTGTGCTGTGCAATCAATGGAGATGTCTTTTGTGACAGGGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425074.3
3UTR-3UTR TCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCATGCAAAACCAGAATATaGGGCAGCCAATTTCAGGTC +
Preference number: 2 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSCKTRI*GSQFQV
Trigger: GACCTGAAATTGGCTGCCTCATATTCTGGTTTTGCA...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCGCTTCTAACAGGCACTaGCTTGACGAAATTCCAGCA +
Preference number: 2 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGASNRH*LDEIPA
Trigger: TGCTGGAATTTCGTCAAGGCAGTGCCTGTTAGAAGC...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCATGAAGGGAAACCTCTaGCAGTGGTCAGCAGAACAA +
Preference number: 2 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGMKGNL*QWSAEQ
Trigger: TTGTTCTGCTGACCACTGGCAGAGGTTTCCCTTCAT...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGATTATCACAACAAATaGCCACTGCTTAGGGTGACC +
Preference number: 2 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSDYHNK*PLLRVT
Trigger: GGTCACCCTAAGCAGTGGGCATTTGTTGTGATAATC...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATAGGCTTCCCATATAGCTaGCACTCGGAAGAACCTCCC +
Preference number: 2 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIGFPYS*HSEEPP
Trigger: GGGAGGTTCTTCCGAGTGCCAGCTATATGGGAAGCC...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCTGCAAAACCAGAATATaGGGCAGCCAATTTCAGGTC +
Preference number: 2 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGCKTRI*GSQFQV
Trigger: GACCTGAAATTGGCTGCCTCATATTCTGGTTTTGCA...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCTTTCTGCACCAACTATaGTTCCTACCTGGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFFLHQL*FLPGPS
Trigger: AGAAGGCCCAGGTAGGAATCATAGTTGGTGCAGAAA...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGATGCCTTTTTCCACAGTaGGAGGCCTCCTCACACTTG +
Preference number: 2 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGCLFPQ*EASSHL
Trigger: CAAGTGTGAGGAGGCCTCTCACTGTGGAAAAAGGCA...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425074.3
3UTR-3UTR GCA 90 bp AGTCCCACACTCACTTCGTGCTCTCTTCTACAAGCACACAGATTTTTCTCTGCAGGGTGGTTTAAGCAATaGAAGACTACCTTTCCTACC +
Preference number: 2 (lower is better)
Translates to: SPTLTSCSLLQAHRFFSAGWFKQ*KTTFPT
Trigger: GGTAGGAAAGGTAGTCTTGCATTGCTTAAACCACCC...TGCAGAGAAAAATCTGTGTGCTTGTAGAAGAGAGCACGAAGTGAGTGTGGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
3UTR-3UTR CCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCGGCTTCCCATATAGCTaGCACTCGGAAGAACCTCCC +
Preference number: 2 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISGFPYS*HSEEPP
Trigger: GGGAGGTTCTTCCGAGTGCCAGCTATATGGGAAGCC...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCGGCTTCCCATATAGCTaGCACTCGGAAGAACCTCCC +
Preference number: 2 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFGFPYS*HSEEPP
Trigger: GGGAGGTTCTTCCGAGTGCCAGCTATATGGGAAGCC...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAGGAAACCTCTGCCAGTaGTCAGCAGAACAAAGCTCC +
Preference number: 2 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGGNLCQ*SAEQSS
Trigger: GGAGCTTTGTTCTGCTGACCACTGGCAGAGGTTTCC...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGACCTACCTGGGCCTTCTaGAGGACAGCCAATATCAAC +
Preference number: 2 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGPTWAF*RTANIN
Trigger: GTTGATATTGGCTGTCCTCCAGAAGGCCCAGGTAGG...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR CAA 90 bp GTTGCAAAACCAGAATATGAGGCAGCCAATTTCAGGTCAGGTGTCTaGAAGGCTAGAAAAATTCGTCCCAAGTGCCATGTGAGATCAACT +
Preference number: 2 (lower is better)
Translates to: VAKPEYEAANFRSGV*KARKIRPKCHVRST
Trigger: AGTTGATCTCACATGGCACTTGGGACGAATTTTTCTAGCCTTCAAGACACCTGACCTGAAATTGGCTGCCTCATATTCTGGTTTTGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp TCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGGGCTTCCACTCATTGTaGGGGGCATGGTGCTCGAAA +
Preference number: 2 (lower is better)
Translates to: SDVSYYVEQGNGIISHPKGFHSL*GAWCSK
Trigger: TTTCGAGCACCATGCCCCTCACAATGAGTGGAAGCC...CTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425074.3
3UTR-3UTR GCA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCAATGAAGGGAAACCTCTaGCAGTGGTCAGCAGAACAA +
Preference number: 2 (lower is better)
Translates to: SSEHVTHTKIAHILGHKAMKGNL*QWSAEQ
Trigger: TTGTTCTGCTGACCACTGGCAGAGGTTTCCCTTCAT...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp GTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGGCCTTTCTCCCACATGTATGGTTTCTaGCCTGGGTGTGTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: VIMLNKETELSPILRPFSHMYGF*PGCVSW
Trigger: CCAGGAAACACACCCAGGGCAGAAACCATACATGTG...GGAGAAAGGCCTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425074.3
3UTR-3UTR GCA 90 bp GTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGGCCTTTCTCCCCTCACACTTGGTGTTaGTGTGTGGCTTCCACTCAT +
Preference number: 2 (lower is better)
Translates to: VIMLNKETELSPILRPFSPHTWC*CVASTH
Trigger: ATGAGTGGAAGCCACACAGCAACACCAAGTGTGAGG...GGAGAAAGGCCTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425074.3
3UTR-3UTR CCA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCAACATTGGGGTTACTTTaGCACAAGGCAGGACTCTTC +
Preference number: 2 (lower is better)
Translates to: SSEHVTHTKIAHILGHKATLGLL*HKAGLF
Trigger: GAAGAGTCCTGCCTTGTGCCAAAGTAACCCCAATGT...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp ACAAGGGACGTAATTCATGTTGCTCCCAGACACATTAGAGATTATCACAACAAAGGAAACCTCTGCCAGTaGTCAGCAGAACAAAGCTCC +
Preference number: 2 (lower is better)
Translates to: TRDVIHVAPRHIRDYHNKGNLCQ*SAEQSS
Trigger: GGAGCTTTGTTCTGCTGACCACTGGCAGAGGTTTCC...TTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAACATGAATTACGTCCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCACTATGATTCCTACCTaGGCCTTCTGGAGGACAGCC +
Preference number: 2 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCTMIPT*AFWRTA
Trigger: GGCTGTCCTCCAGAAGGCCCAGGTAGGAATCATAGT...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCCAGAGGTCTGTCTTTTaGAACACATTGGGGTTACTT +
Preference number: 2 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFQRSVF*NTLGLL
Trigger: AAGTAACCCCAATGTGTTTCAAAAGACAGACCTCTG...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGATTTCTGCACCAACTATaGTTCCTACCTGGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGFLHQL*FLPGPS
Trigger: AGAAGGCCCAGGTAGGAATCATAGTTGGTGCAGAAA...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTGCTTCTAACAGGCACTaGCTTGACGAAATTCCAGCA +
Preference number: 2 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPASNRH*LDEIPA
Trigger: TGCTGGAATTTCGTCAAGGCAGTGCCTGTTAGAAGC...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCAGCACAAAGACAGATaGCTTCTAACAGGCACTGCC +
Preference number: 2 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNQHKDR*LLTGTA
Trigger: GGCAGTGCCTGTTAGAAGCCATCTGTCTTTGTGCTG...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCCAGCACAAAGACAGATaGCTTCTAACAGGCACTGCC +
Preference number: 2 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFQHKDR*LLTGTA
Trigger: GGCAGTGCCTGTTAGAAGCCATCTGTCTTTGTGCTG...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCAGAGATACAGATAGTTaGAGCTCTCACAAAAGCTGT +
Preference number: 2 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGRDTDS*SSHKSC
Trigger: ACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCT...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATCCTACCTGGGCCTTCTaGAGGACAGCCAATATCAAC +
Preference number: 2 (lower is better)
Translates to: NISVNPHNGARVMETHVDPTWAF*RTANIN
Trigger: GTTGATATTGGCTGTCCTCCAGAAGGCCCAGGTAGG...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCAGCACACACATGTATaGTTTCTGCCCTGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISQHTHV*FLPWVC
Trigger: ACACACCCAGGGCAGAAACCATACATGTGTGTGCTG...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425074.3
3UTR-3UTR CCA 90 bp ATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGGCCTCTTGGTGTTGCTGTGTaGCTTCCACTCATTGTGAGG +
Preference number: 2 (lower is better)
Translates to: MSVIMLNKETELSPILRPLGVAV*LPLIVR
Trigger: CCTCACAATGAGTGGAAGCCACACAGCAACACCAAG...AGGCCTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425074.3
3UTR-3UTR TCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACAGAACCTCCCCAGGGTaGGTGTTTGAGTGTATAAAG +
Preference number: 2 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNRTSPG*VFECIK
Trigger: CTTTATACACTCAAACACTCACCCTGGGGAGGTTCT...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp ACAAGGGACGTAATTCATGTTGCTCCCAGACACATTAGAGATTATCACAACAAAAGAACCTCCCCAGGGTaGGTGTTTGAGTGTATAAAG +
Preference number: 2 (lower is better)
Translates to: TRDVIHVAPRHIRDYHNKRTSPG*VFECIK
Trigger: CTTTATACACTCAAACACTCACCCTGGGGAGGTTCT...TTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAACATGAATTACGTCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCAGAACCTCCCCAGGGTaGGTGTTTGAGTGTATAAAG +
Preference number: 2 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCRTSPG*VFECIK
Trigger: CTTTATACACTCAAACACTCACCCTGGGGAGGTTCT...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGATCAGGTCAGGTGTCTTaGAGGCTAGAAAAATTCGTC +
Preference number: 2 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGSGQVS*RLEKFV
Trigger: GACGAATTTTTCTAGCCTTCAAGACACCTGACCTGA...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACGCTTCTAACAGGCACTaGCTTGACGAAATTCCAGCA +
Preference number: 2 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNASNRH*LDEIPA
Trigger: TGCTGGAATTTCGTCAAGGCAGTGCCTGTTAGAAGC...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCCTCTCCTGGATCACTTaGTTTGAAACTATTTCTCTA +
Preference number: 2 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGLSWIT*FETISL
Trigger: TAGAGAAATAGTTTCAAAGCAAGTGATCCAGGAGAG...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCACATAAAGGCTATGCTTaGAGCTTCTCTCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: SSEHVTHTKIAHILGHKAHKGYA*SFSLMS
Trigger: TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATCAGCACAAAGACAGATaGCTTCTAACAGGCACTGCC +
Preference number: 2 (lower is better)
Translates to: NISVNPHNGARVMETHVDQHKDR*LLTGTA
Trigger: GGCAGTGCCTGTTAGAAGCCATCTGTCTTTGTGCTG...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCACATTGGGGTTACTTTaGCACAAGGCAGGACTCTTC +
Preference number: 2 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISTLGLL*HKAGLF
Trigger: GAAGAGTCCTGCCTTGTGCCAAAGTAACCCCAATGT...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTCCCAGGGTGAGTGTTTaGGTGTATAAAGTTCTACTT +
Preference number: 2 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPPRVSV*VYKVLL
Trigger: AAGTAGAACTTTATACACTCAAACACTCACCCTGGG...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp ACAAGGGACGTAATTCATGTTGCTCCCAGACACATTAGAGATTATCACAACAAATCAGGTCAGGTGTCTTaGAGGCTAGAAAAATTCGTC +
Preference number: 2 (lower is better)
Translates to: TRDVIHVAPRHIRDYHNKSGQVS*RLEKFV
Trigger: GACGAATTTTTCTAGCCTTCAAGACACCTGACCTGA...TTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAACATGAATTACGTCCCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACTCAGGTCAGGTGTCTTaGAGGCTAGAAAAATTCGTC +
Preference number: 2 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNSGQVS*RLEKFV
Trigger: GACGAATTTTTCTAGCCTTCAAGACACCTGACCTGA...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACTGCAAAACCAGAATATaGGGCAGCCAATTTCAGGTC +
Preference number: 2 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNCKTRI*GSQFQV
Trigger: GACCTGAAATTGGCTGCCTCATATTCTGGTTTTGCA...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATTTTCTGCACCAACTATaGTTCCTACCTGGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: NISVNPHNGARVMETHVDFLHQL*FLPGPS
Trigger: AGAAGGCCCAGGTAGGAATCATAGTTGGTGCAGAAA...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCAAGGAAACTTTTGGTTTaGGAAGTGCCAACATGTATC +
Preference number: 2 (lower is better)
Translates to: SSEHVTHTKIAHILGHKARKLLV*EVPTCI
Trigger: GATACATGTTGGCACTTCTCAAACCAAAAGTTTCCT...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATGACATCTCCATTGATTaGACAGCACAGTTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: VFECIKFYFWLSATHKGYDISID*TAQLFR
Trigger: TCTGAACAACTGTGCTGTGCAATCAATGGAGATGTC...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425074.3
3UTR-3UTR CCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATCATAAAGGCTATGCTTaGAGCTTCTCTCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: VFECIKFYFWLSATHKGYHKGYA*SFSLMS
Trigger: TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
3UTR-3UTR CCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGACATAAAGGCTATGCTTaGAGCTTCTCTCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGHKGYA*SFSLMS
Trigger: TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
3UTR-3UTR TCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCAGAGGTCTGTCTTTTaGAACACATTGGGGTTACTT +
Preference number: 2 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNQRSVF*NTLGLL
Trigger: AAGTAACCCCAATGTGTTTCAAAAGACAGACCTCTG...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCAGATCAACTATATCCATaGAGGGAAACCTCTGCCAGT +
Preference number: 2 (lower is better)
Translates to: THKANRILKISDSLKIKADQLYP*RETSAS
Trigger: ACTGGCAGAGGTTTCCCTTCATGGATATAGTTGATC...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATGATCAACTATATCCATaGAGGGAAACCTCTGCCAGT +
Preference number: 2 (lower is better)
Translates to: NISVNPHNGARVMETHVDDQLYP*RETSAS
Trigger: ACTGGCAGAGGTTTCCCTTCATGGATATAGTTGATC...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTAGGAAACTTTTGGTTTaGGAAGTGCCAACATGTATC +
Preference number: 2 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPRKLLV*EVPTCI
Trigger: GATACATGTTGGCACTTCTCAAACCAAAAGTTTCCT...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCCATAAAGGCTATGCTTaGAGCTTCTCTCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFHKGYA*SFSLMS
Trigger: TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCAGAATCAGGAAACTTTTaGTTTGAGAAGTGCCAACAT +
Preference number: 2 (lower is better)
Translates to: SSEHVTHTKIAHILGHKAESGNF*FEKCQH
Trigger: ATGTTGGCACTTCTCAAACCAAAAGTTTCCTGATTC...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp TCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGCGAAAATGCTTGAGCTaGCTAGGAAGTCCTTACAAG +
Preference number: 2 (lower is better)
Translates to: SDVSYYVEQGNGIISHPKRKCLS*LGSPYK
Trigger: CTTGTAAGGACTTCCTAGCCAGCTCAAGCATTTTCG...CTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425074.3
3UTR-3UTR TCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCACCCAGGGTGAGTGTTTaGGTGTATAAAGTTCTACTT +
Preference number: 2 (lower is better)
Translates to: THKANRILKISDSLKIKAPRVSV*VYKVLL
Trigger: AAGTAGAACTTTATACACTCAAACACTCACCCTGGG...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTCAAAAATGTTTAGACTaGCTTCTGGACAGTAACCTT +
Preference number: 2 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPQKCLD*LLDSNL
Trigger: AAGGTTACTGTCCAGAAGTCAGTCTAAACATTTTTG...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATAAAAATTCGTCCCAAGTaGCATGTGAGATCAACTATA +
Preference number: 2 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIKIRPK*HVRSTI
Trigger: TATAGTTGATCTCACATGGCACTTGGGACGAATTTT...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTAAAATTCGTCCCAAGTaGCATGTGAGATCAACTATA +
Preference number: 2 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPKIRPK*HVRSTI
Trigger: TATAGTTGATCTCACATGGCACTTGGGACGAATTTT...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATAAGAGCTAGTCTTTaGCATCCTACTATCACTTCA +
Preference number: 2 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGIRASL*HPTITS
Trigger: TGAAGTGATAGTAGGATGGCAAAGACTAGCTCTTAT...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTAATCTGGGTTTCTaGACCAACTATGATTCCTAC +
Preference number: 2 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGINLGF*TNYDSY
Trigger: GTAGGAATCATAGTTGGTGCAGAAACCCAGATTAAT...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCAAAACTTGTAGTTAGATaGTGTCCTACAAAACACACT +
Preference number: 2 (lower is better)
Translates to: SSEHVTHTKIAHILGHKAKLVVR*CPTKHT
Trigger: AGTGTGTTTTGTAGGACAGCATCTAACTACAAGTTT...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATAATAAAGTTCTACTTCTaGCTGTCGGCTACACATAAA +
Preference number: 2 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIIKFYF*LSATHK
Trigger: TTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTAT...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCTCTTTTGAAACACATTaGGGTTACTTTGGCACAAGG +
Preference number: 2 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCSFETH*GYFGTR
Trigger: CCTTGTGCCAAAGTAACCCCAATGTGTTTCAAAAGA...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR TCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCCAAAAATGTTTAGACTaGCTTCTGGACAGTAACCTT +
Preference number: 2 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFQKCLD*LLDSNL
Trigger: AAGGTTACTGTCCAGAAGTCAGTCTAAACATTTTTG...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACATAAGAGCTAGTCTTTaGCATCCTACTATCACTTCA +
Preference number: 2 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNIRASL*HPTITS
Trigger: TGAAGTGATAGTAGGATGGCAAAGACTAGCTCTTAT...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp ACAAGGGACGTAATTCATGTTGCTCCCAGACACATTAGAGATTATCACAACAAAATAAGAGCTAGTCTTTaGCATCCTACTATCACTTCA +
Preference number: 2 (lower is better)
Translates to: TRDVIHVAPRHIRDYHNKIRASL*HPTITS
Trigger: TGAAGTGATAGTAGGATGGCAAAGACTAGCTCTTAT...TTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAACATGAATTACGTCCCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTCTCCTGGATCACTTaGTTTGAAACTATTTCTCTA +
Preference number: 2 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNLSWIT*FETISL
Trigger: TAGAGAAATAGTTTCAAAGCAAGTGATCCAGGAGAG...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATTCTTTTGAAACACATTaGGGTTACTTTGGCACAAGG +
Preference number: 2 (lower is better)
Translates to: NISVNPHNGARVMETHVDSFETH*GYFGTR
Trigger: CCTTGTGCCAAAGTAACCCCAATGTGTTTCAAAAGA...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACAACCATATAGGATTATaGTCACCAGAGTCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNNHIGL*SPESKK
Trigger: TTTCTTGGACTCTGGTGACCATAATCCTATATGGTT...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCAAAAATTCGTCCCAAGTaGCATGTGAGATCAACTATA +
Preference number: 2 (lower is better)
Translates to: THKANRILKISDSLKIKAKIRPK*HVRSTI
Trigger: TATAGTTGATCTCACATGGCACTTGGGACGAATTTT...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACATATTCCCTATAGTTTaGTGCAGTTTTCTCATTCCT +
Preference number: 2 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNIFPIV*CSFLIP
Trigger: AGGAATGAGAAAACTGCAGCAAACTATAGGGAATAT...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCATTCCTTTATTAATCTaGGTTTCTGCACCAACTATG +
Preference number: 2 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFIPLLI*VSAPTM
Trigger: CATAGTTGGTGCAGAAACCCAGATTAATAAAGGAAT...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCATTCCTTTATTAATCTaGGTTTCTGCACCAACTATG +
Preference number: 2 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCIPLLI*VSAPTM
Trigger: CATAGTTGGTGCAGAAACCCAGATTAATAAAGGAAT...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR GCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATATATTCCCTATAGTTTaGTGCAGTTTTCTCATTCCT +
Preference number: 2 (lower is better)
Translates to: NISVNPHNGARVMETHVDIFPIV*CSFLIP
Trigger: AGGAATGAGAAAACTGCAGCAAACTATAGGGAATAT...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR GCA 72 bp GGCACAAGTAGAATTGTGCCGTGTTGTGTTCTTCTGTaGCTGGGCAGCACCAGGTTCCAATGCAGTCCCACA +
Preference number: 3 (lower is better)
Translates to: GTSRIVPCCVLL*LGSTRFQCSPT
Trigger: TGTGGGACTGCATTGGAACCTGGTGCTGCCCAGGCACAGAAGAACACAACACGGCACAATTCTACTTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600175.5
3UTR CCA 72 bp AGGTTCCTTTCACGGGGGTTGAAAGGAATTTGCTTCTaGCCCCAGGCTGGTGTAAATGCTGTCTCCATGGGC +
Preference number: 3 (lower is better)
Translates to: RFLSRGLKGICF*PQAGVNAVSMG
Trigger: GCCCATGGAGACAGCATTTACACCAGCCTGGGGCCAGAAGCAAATTCCTTTCAACCCCCGTGAAAGGAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600175.5
3UTR GCA 72 bp TGTGTTCTTCTGTGCCTGGGCAGCACCAGGTTCCAATaGAGTCCCACACTCACTTCGTGCTCTCTTCTACAA +
Preference number: 3 (lower is better)
Translates to: CVLLCLGSTRFQ*SPTLTSCSLLQ
Trigger: TTGTAGAAGAGAGCACGAAGTGAGTGTGGGACTGCATTGGAACCTGGTGCTGCCCAGGCACAGAAGAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600175.5
3UTR CCA 72 bp CAAGTAGAATTGTGCCGTGTTGTGTTCTTCTGTGCCTaGGCAGCACCAGGTTCCAATGCAGTCCCACACTCA +
Preference number: 3 (lower is better)
Translates to: QVELCRVVFFCA*AAPGSNAVPHS
Trigger: TGAGTGTGGGACTGCATTGGAACCTGGTGCTGCCCAGGCACAGAAGAACACAACACGGCACAATTCTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600175.5
3UTR CCA 72 bp CTCTGCATGTTGGTCTGCCAAGGGATGGGAAAGGGGTaGTTTAAGCAATGCAAGACTACCTTTCCTACCCAC +
Preference number: 3 (lower is better)
Translates to: LCMLVCQGMGKG*FKQCKTTFPTH
Trigger: GTGGGTAGGAAAGGTAGTCTTGCATTGCTTAAACCACCCCTTTCCCATCCCTTGGCAGACCAACATGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
3UTR GCA 72 bp CAAGCCTCCCCTGTCACAAAAGACATCTCCATTGATTaGACAGCACAGTTGTTCAGAAGAAAGGGCCTGCTC +
Preference number: 3 (lower is better)
Translates to: QASPVTKDISID*TAQLFRRKGLL
Trigger: GAGCAGGCCCTTTCTTCTGAACAACTGTGCTGTGCAATCAATGGAGATGTCTTTTGTGACAGGGGAGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425074.3
3UTR-3UTR CAA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCACTAACAGGCACTGCCTaGACGAAATTCCAGCAAGAG +
Preference number: 3 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSLTGTA*TKFQQE
Trigger: CTCTTGCTGGAATTTCGTCAAGGCAGTGCCTGTTAG...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR GCA 72 bp AGCACCAGGTTCCAATGCAGTCCCACACTCACTTCGTaGTCTCTTCTACAAGCACACAGATTTTTCTCTGCA +
Preference number: 3 (lower is better)
Translates to: STRFQCSPTLTS*SLLQAHRFFSA
Trigger: TGCAGAGAAAAATCTGTGTGCTTGTAGAAGAGAGCACGAAGTGAGTGTGGGACTGCATTGGAACCTGGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
3UTR CCA 72 bp CCCTCTAAGTATTTTGCACAGGCTGGTTCCTGTGCCTaGAACAACCTTCCAACCTTATTCCAATGGTTGGCA +
Preference number: 3 (lower is better)
Translates to: PSKYFAQAGSCA*NNLPTLFQWLA
Trigger: TGCCAACCATTGGAATAAGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATACTTAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450712.2
3UTR TCA 72 bp AGATGCTGTCCTACAAAACACACTTCAGGGCCAGAGTaGCAGACAGACAACACACACACAGACAGATGTACA +
Preference number: 3 (lower is better)
Translates to: RCCPTKHTSGPE*QTDNTHTDRCT
Trigger: TGTACATCTGTCTGTGTGTGTGTTGTCTGTCTGTCACTCTGGCCCTGAAGTGTGTTTTGTAGGACAGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR CCA 72 bp CACAGATTTTTCTCTGCATGTTGGTCTGCCAAGGGATaGGAAAGGGGTGGTTTAAGCAATGCAAGACTACCT +
Preference number: 3 (lower is better)
Translates to: HRFFSACWSAKG*ERGGLSNARLP
Trigger: AGGTAGTCTTGCATTGCTTAAACCACCCCTTTCCCATCCCTTGGCAGACCAACATGCAGAGAAAAATCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
3UTR-3UTR CAA 90 bp GTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGGCCTTTCTCCGTAGAAGGACCTCCCTaGGGAATCCTGATCTGTGAC +
Preference number: 3 (lower is better)
Translates to: VIMLNKETELSPILRPFSVEGPP*GILICD
Trigger: GTCACAGATCAGGATTCCCAAGGGAGGTCCTTCTAC...GGAGAAAGGCCTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425074.3
3UTR TCA 72 bp GGGCCTTCTGGAGGACAGCCAATATCAACTGCCTACTaGAAAATAGACTTCAGAGATCTTGACATGTCCACT +
Preference number: 3 (lower is better)
Translates to: GPSGGQPISTAY*KIDFRDLDMST
Trigger: AGTGGACATGTCAAGATCTCTGAAGTCTATTTTTCAGTAGGCAGTTGATATTGGCTGTCCTCCAGAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CAA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTCTAACAGGCACTGCCTaGACGAAATTCCAGCAAGAG +
Preference number: 3 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPLTGTA*TKFQQE
Trigger: CTCTTGCTGGAATTTCGTCAAGGCAGTGCCTGTTAG...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CAA 90 bp ATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGGCCTGGTGCTCGAAAATGCTaGAGCTGGCTAGGAAGTCCT +
Preference number: 3 (lower is better)
Translates to: MSVIMLNKETELSPILRPGARKC*SWLGSP
Trigger: AGGACTTCCTAGCCAGCTCAAGCATTTTCGAGCACC...AGGCCTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425074.3
3UTR-3UTR CAA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCTAACAGGCACTGCCTaGACGAAATTCCAGCAAGAG +
Preference number: 3 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISLTGTA*TKFQQE
Trigger: CTCTTGCTGGAATTTCGTCAAGGCAGTGCCTGTTAG...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CAA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCTTCAGGTCAGGTGTCTaGAAGGCTAGAAAAATTCGT +
Preference number: 3 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFFRSGV*KARKIR
Trigger: ACGAATTTTTCTAGCCTTCAAGACACCTGACCTGAA...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR CCA 72 bp TACTTCTGGCTGTCGGCTACACATAAAGGCTATGCTTaGAGCTTCTCTCTGATGTCAGTTATTATGTTGAAC +
Preference number: 3 (lower is better)
Translates to: YFWLSATHKGYA*SFSLMSVIMLN
Trigger: GTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
3UTR-3UTR CAA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCAACAGAGGTCTGTCTTTaGAAACACATTGGGGTTACT +
Preference number: 3 (lower is better)
Translates to: SSEHVTHTKIAHILGHKATEVCL*KHIGVT
Trigger: AGTAACCCCAATGTGTTTCAAAAGACAGACCTCTGT...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR GCA 72 bp GTTGCTCCCAGACACATTAGAGATTATCACAACAAATaGCCACTGCTTAGGGTGACCTCAATTACACAAAAA +
Preference number: 3 (lower is better)
Translates to: VAPRHIRDYHNK*PLLRVTSITQK
Trigger: TTTTTGTGTAATTGAGGTCACCCTAAGCAGTGGGCATTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR CCA 72 bp TTGCCATCCTACTATCACTTCAGAGATACAGATAGTTaGAGCTCTCACAAAAGCTGTTCTTCCCTTCATACT +
Preference number: 3 (lower is better)
Translates to: LPSYYHFRDTDS*SSHKSCSSLHT
Trigger: AGTATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGTGATAGTAGGATGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CAA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATAACAGAGGTCTGTCTTTaGAAACACATTGGGGTTACT +
Preference number: 3 (lower is better)
Translates to: TSEIQIVGALTKAVLPFITEVCL*KHIGVT
Trigger: AGTAACCCCAATGTGTTTCAAAAGACAGACCTCTGT...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CAA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCAAGATGTACATATAACTaGTACAGCCCTCTATCTACC +
Preference number: 3 (lower is better)
Translates to: SSEHVTHTKIAHILGHKARCTYN*YSPLST
Trigger: GGTAGATAGAGGGCTGTACAAGTTATATGTACATCT...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CAA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTTCAGGTCAGGTGTCTaGAAGGCTAGAAAAATTCGT +
Preference number: 3 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFFRSGV*KARKIR
Trigger: ACGAATTTTTCTAGCCTTCAAGACACCTGACCTGAA...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CAA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACACAGATACTGTGGCTTaGTTCTTGTGTGAGTTCTCT +
Preference number: 3 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNTDTVA*FLCEFS
Trigger: AGAGAACTCACACAAGAACAAAGCCACAGTATCTGT...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CAA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCATTCAGGTCAGGTGTCTaGAAGGCTAGAAAAATTCGT +
Preference number: 3 (lower is better)
Translates to: THKANRILKISDSLKIKAFRSGV*KARKIR
Trigger: ACGAATTTTTCTAGCCTTCAAGACACCTGACCTGAA...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CAA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCATATTCCCTATAGTTaGCTGCAGTTTTCTCATTCC +
Preference number: 3 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNHIPYS*LQFSHS
Trigger: GGAATGAGAAAACTGCAGCAAACTATAGGGAATATG...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CAA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCCATATTCCCTATAGTTaGCTGCAGTTTTCTCATTCC +
Preference number: 3 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFHIPYS*LQFSHS
Trigger: GGAATGAGAAAACTGCAGCAAACTATAGGGAATATG...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CAA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCCAGGAAACTTTTGGTTaGAGAAGTGCCAACATGTAT +
Preference number: 3 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFQETFG*RSANMY
Trigger: ATACATGTTGGCACTTCTCAAACCAAAAGTTTCCTG...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR-3UTR CAA 90 bp TCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGCAAAAGACATCTCCATaGATTGCACAGCACAGTTGT +
Preference number: 3 (lower is better)
Translates to: SDVSYYVEQGNGIISHPKQKTSP*IAQHSC
Trigger: ACAACTGTGCTGTGCAATCAATGGAGATGTCTTTTG...CTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425074.3
3UTR-3UTR CAA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATCATATTCCCTATAGTTaGCTGCAGTTTTCTCATTCC +
Preference number: 3 (lower is better)
Translates to: NISVNPHNGARVMETHVDHIPYS*LQFSHS
Trigger: GGAATGAGAAAACTGCAGCAAACTATAGGGAATATG...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR TCA 72 bp TACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTaGTACCAAAGCCAAACCTGGGCAAGATATAAAATT +
Preference number: 3 (lower is better)
Translates to: YFPTYSIKLALC*YQSQTWARYKI
Trigger: AATTTTATATCTTGCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR GCA 72 bp GGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTaGTGCAGTTTTCTCATTCCTTTATTAATCTGGGTT +
Preference number: 3 (lower is better)
Translates to: GCTFRRVIFPIV*CSFLIPLLIWV
Trigger: AACCCAGATTAATAAAGGAATGAGAAAACTGCAGCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR TCA 72 bp ATAAATATGTGCAGTTTATTGCAAAAATGTTTAGACTaGCTTCTGGACAGTAACCTTAGCCATAAGAGACAC +
Preference number: 3 (lower is better)
Translates to: INMCSLLQKCLD*LLDSNLSHKRH
Trigger: GTGTCTCTTATGGCTAAGGTTACTGTCCAGAAGTCAGTCTAAACATTTTTGCAATAAACTGCACATATTTAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR TCA 72 bp AATAATACCAATTATTCACAAACTCTTCCAGAGAGCTaGAGAGCAGGAATACTTCCCAACTTACTCTATAAA +
Preference number: 3 (lower is better)
Translates to: NNTNYSQTLPES*RAGILPNLLYK
Trigger: TTTATAGAGTAAGTTGGGAAGTATTCCTGCTCTTCAGCTCTCTGGAAGAGTTTGTGAATAATTGGTATTATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp TGGGCCCCAGGCCACTTCGGTCAGCTGTTGGTGGTGCCAGCTGAGACTCAGGTTTGGACTACGGAAGGGTaGCGACAAGTGCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: WAPGHFGQLLVVPAETQVWTTEG*RQVQEP
Trigger: AGGTTCCTGCACTTGTCGCCACCCTTCCGTAGTCCA...AACCTGAGTCTCAGCTGGCACCACCAACAGCTGACCGAAGTGGCCTGGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR GCA 90 bp GGGGCATGGTGCTCGAAAATGCTTGAGCTGGCTAGGAAGTCCTTACAAGCCTCCGTTCATGGGAACCTGTaGCGGGCCCATCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GAWCSKMLELARKSLQASVHGNL*RAHRLS
Trigger: GCTGAGCCGATGGGCCCGGCACAGGTTCCCATGAAC...GGAGGCTTGTAAGGACTTCCTAGCCAGCTCAAGCATTTTCGAGCACCATGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425074.3
CDS-3UTR TCA 90 bp GCCCCTCTAAGTATTTTGCACAGGCTGGTTCCTGTGCCTGGAACAACCTTCCAATGGGGGTGGGATCGGTaGGAGCATGGACATTCTCCC +
Preference number: 4 (lower is better)
Translates to: APLSILHRLVPVPGTTFQWGWDR*EHGHSP
Trigger: GGGAGAATGTCCATGCTCTCACCGATCCCACCCCCA...TTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATACTTAGAGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR GCA 90 bp CTACAAGCACACAGATTTTTCTCTGCATGTTGGTCTGCCAAGGGATGGGAAAGGCAGCTCGTGTTCCTGTaGCGGGCCCATCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LQAHRFFSACWSAKGWERQLVFL*RAHRLS
Trigger: GCTGAGCCGATGGGCCCGGCACAGGAACACGAGCTG...CCTTTCCCATCCCTTGGCAGACCAACATGCAGAGAAAAATCTGTGTGCTTGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601768.1
CDS-3UTR CCA 90 bp GCACCAGGTTCCAATGCAGTCCCACACTCACTTCGTGCTCTCTTCTACAAGCACACAAGTGCAGGAACCTaGGATCAGCTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: APGSNAVPHSLRALFYKHTSAGT*DQLSRA
Trigger: GGCCCTGGACAGCTGATCCCAGGTTCCTGCACTTGT...GTGCTTGTAGAAGAGAGCACGAAGTGAGTGTGGGACTGCATTGGAACCTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
3UTR CAA 72 bp TGGTGCCAGCTGAGACTCAGGTTCCTTTCACGGGGGTaGAAAGGAATTTGCTTCTGGCCCCAGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: WCQLRLRFLSRG*KGICFWPQAGV
Trigger: TACACCAGCCTGGGGCCAGAAGCAAATTCCTTTCAACCCCCGTGAAAGGAACCTGAGTCTCAGCTGGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR TCA 90 bp GGCCACTTCGGTCAGCTGTTGGTGGTGCCAGCTGAGACTCAGGTTCCTTTCACGGTCCACAATTACTTCTaGGTTCATGGGAACCTGTGC +
Preference number: 4 (lower is better)
Translates to: GHFGQLLVVPAETQVPFTVHNYF*VHGNLC
Trigger: GCACAGGTTCCCATGAACTCAGAAGTAATTGTGGAC...CGTGAAAGGAACCTGAGTCTCAGCTGGCACCACCAACAGCTGACCGAAGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR GCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTCATGGGAACCTGTaGCGGGCCCATCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSVHGNL*RAHRLS
Trigger: GCTGAGCCGATGGGCCCGGCACAGGTTCCCATGAAC...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
CDS-3UTR GCA 90 bp CCAGCTGAGACTCAGGTTCCTTTCACGGGGGTTGAAAGGAATTTGCTTCTGGCCGTCAGCTGTTGGTGGTaGCAGCTGAGACTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PAETQVPFTGVERNLLLAVSCWW*QLRLRF
Trigger: GAACCTGAGTCTCAGCTGGCACCACCAACAGCTGAC...GGCCAGAAGCAAATTCCTTTCAACCCCCGTGAAAGGAACCTGAGTCTCAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR CCA 90 bp CTACAAGCACACAGATTTTTCTCTGCATGTTGGTCTGCCAAGGGATGGGAAAGGCCGCCATCAGGCCTGTaGACTACGGAAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LQAHRFFSACWSAKGWERPPSGL*TTEGWR
Trigger: TCGCCACCCTTCCGTAGTCCACAGGCCTGATGGCGG...CCTTTCCCATCCCTTGGCAGACCAACATGCAGAGAAAAATCTGTGTGCTTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
CDS-3UTR CCA 90 bp TACAAGCACACAGATTTTTCTCTGCATGTTGGTCTGCCAAGGGATGGGAAAGGGCCGCCATCAGGCCTGTaGACTACGGAAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: YKHTDFSLHVGLPRDGKGPPSGL*TTEGWR
Trigger: TCGCCACCCTTCCGTAGTCCACAGGCCTGATGGCGG...CCCTTTCCCATCCCTTGGCAGACCAACATGCAGAGAAAAATCTGTGTGCTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
CDS-3UTR CCA 90 bp CGAACACGTCCTCAAAGTTCACCTGCCCCTCTAAGTATTTTGCACAGGCTGGTTTGCTGGAGAGCGTATTaGGTGGGGGTGGGATCGGTG +
Preference number: 4 (lower is better)
Translates to: RTRPQSSPAPLSILHRLVCWRAY*VGVGSV
Trigger: CACCGATCCCACCCCCACCCAATACGCTCTCCAGCA...AACCAGCCTGTGCAAAATACTTAGAGGGGCAGGTGAACTTTGAGGACGTGTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR CCA 90 bp CTCAGGTTCCTTTCACGGGGGTTGAAAGGAATTTGCTTCTGGCCCCAGGCTGGTTGGTCTGCCAAGGGATaGGAAAGGGGTGGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: LRFLSRGLKGICFWPQAGWSAKG*ERGGLS
Trigger: GCTTAAACCACCCCTTTCCCATCCCTTGGCAGACCA...ACCAGCCTGGGGCCAGAAGCAAATTCCTTTCAACCCCCGTGAAAGGAACCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR GCA 90 bp TGCTCTCTTCTACAAGCACACAGATTTTTCTCTGCATGTTGGTCTGCCAAGGGAGTTCATGGGAACCTGTaGCGGGCCCATCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: CSLLQAHRFFSACWSAKGVHGNL*RAHRLS
Trigger: GCTGAGCCGATGGGCCCGGCACAGGTTCCCATGAAC...TCCCTTGGCAGACCAACATGCAGAGAAAAATCTGTGTGCTTGTAGAAGAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR CCA 90 bp CCTGTGCCTGGAACAACCTTCCAACCTTATTCCAATGGTTGGCAGAAATGGAAACCGCCATCAGGCCTGTaGACTACGGAAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: PVPGTTFQPYSNGWQKWKPPSGL*TTEGWR
Trigger: TCGCCACCCTTCCGTAGTCCACAGGCCTGATGGCGG...TTTCCATTTCTGCCAACCATTGGAATAAGGTTGGAAGGTTGTTCCAGGCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR CCA 90 bp GGGGCATGGTGCTCGAAAATGCTTGAGCTGGCTAGGAAGTCCTTACAAGCCTCCCAGCACACACATGTATaGTTTCTGCCCTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GAWCSKMLELARKSLQASQHTHV*FLPWVC
Trigger: ACACACCCAGGGCAGAAACCATACATGTGTGTGCTG...GGAGGCTTGTAAGGACTTCCTAGCCAGCTCAAGCATTTTCGAGCACCATGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425074.3
CDS-3UTR CCA 90 bp GGCCACTTCGGTCAGCTGTTGGTGGTGCCAGCTGAGACTCAGGTTCCTTTCACGAAAGGAATTTGCTTCTaGCCCCAGGCTGGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: GHFGQLLVVPAETQVPFTKGICF*PQAGVN
Trigger: ATTTACACCAGCCTGGGGCCAGAAGCAAATTCCTTT...CGTGAAAGGAACCTGAGTCTCAGCTGGCACCACCAACAGCTGACCGAAGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR TCA 90 bp AAGCACACAGATTTTTCTCTGCATGTTGGTCTGCCAAGGGATGGGAAAGGGGTGGTTGGTGGTGCCAGCTaGGACTCAGGTTCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: KHTDFSLHVGLPRDGKGVVGGAS*DSGSFH
Trigger: GTGAAAGGAACCTGAGTCTCAGCTGGCACCACCAAC...CACCCCTTTCCCATCCCTTGGCAGACCAACATGCAGAGAAAAATCTGTGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR GCA 90 bp GAACAACCTTCCAACCTTATTCCAATGGTTGGCAGAAATGGAAACCCCTCCATAGTTCATGGGAACCTGTaGCGGGCCCATCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: EQPSNLIPMVGRNGNPSIVHGNL*RAHRLS
Trigger: GCTGAGCCGATGGGCCCGGCACAGGTTCCCATGAAC...TATGGAGGGGTTTCCATTTCTGCCAACCATTGGAATAAGGTTGGAAGGTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR GCA 90 bp GCACAGGCTGGTTCCTGTGCCTGGAACAACCTTCCAACCTTATTCCAATGGTTGACAGGCTGGTTCCTGTaGCTGGAACAACCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: AQAGSCAWNNLPTLFQWLTGWFL*LEQPSN
Trigger: GTTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGT...CAACCATTGGAATAAGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR GCA 90 bp CAGGCCACTTCGGTCAGCTGTTGGTGGTGCCAGCTGAGACTCAGGTTCCTTTCAGGGTGGTTTAAGCAATaGAAGACTACCTTTCCTACC +
Preference number: 4 (lower is better)
Translates to: QATSVSCWWCQLRLRFLSGWFKQ*KTTFPT
Trigger: GGTAGGAAAGGTAGTCTTGCATTGCTTAAACCACCC...TGAAAGGAACCTGAGTCTCAGCTGGCACCACCAACAGCTGACCGAAGTGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR GCA 90 bp AGCACACAGATTTTTCTCTGCATGTTGGTCTGCCAAGGGATGGGAAAGGGGTGGTGTTGTGTTCTTCTGTaGCTGGGCAGCACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: STQIFLCMLVCQGMGKGWCCVLL*LGSTRF
Trigger: GAACCTGGTGCTGCCCAGGCACAGAAGAACACAACA...CCACCCCTTTCCCATCCCTTGGCAGACCAACATGCAGAGAAAAATCTGTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR CCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAACAAGTGCAGGAACCTaGGATCAGCTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSTSAGT*DQLSRA
Trigger: GGCCCTGGACAGCTGATCCCAGGTTCCTGCACTTGT...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR TCA 90 bp TGCCCCTCTAAGTATTTTGCACAGGCTGGTTCCTGTGCCTGGAACAACCTTCCACTGTCACCTCAGGTCTaGCATTGCGTTCTGGAAACT +
Preference number: 4 (lower is better)
Translates to: CPSKYFAQAGSCAWNNLPLSPQV*HCVLET
Trigger: AGTTTCCAGAACGCAATGTCAGACCTGAGGTGACAG...TGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATACTTAGAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR TCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGGCTTCCACTCATTGTaGGGGGCATGGTGCTCGAAA +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSGFHSL*GAWCSK
Trigger: TTTCGAGCACCATGCCCCTCACAATGAGTGGAAGCC...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR GCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAAAGGGTGGCGACAAGTaGAGGAACCTGGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSKGGDK*RNLGSA
Trigger: AGCTGATCCCAGGTTCCTGCACTTGTCGCCACCCTT...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR GCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCCCGAGATCGCGCCACTaGACTCCAACCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGPRSRH*TPTWMT
Trigger: TGTCATCCAGGTTGGAGTGCAGTGGCGCGATCTCGG...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp AAGTATTTTGCACAGGCTGGTTCCTGTGCCTGGAACAACCTTCCAACCTTATTCACAAGTGCAGGAACCTaGGATCAGCTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KYFAQAGSCAWNNLPTLFTSAGT*DQLSRA
Trigger: GGCCCTGGACAGCTGATCCCAGGTTCCTGCACTTGT...GAATAAGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR CCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGGCTTCCCATATAGCTaGCACTCGGAAGAACCTCCC +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSGFPYS*HSEEPP
Trigger: GGGAGGTTCTTCCGAGTGCCAGCTATATGGGAAGCC...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR CAA 72 bp ACACGTCCTCAAAGTTCACCTGCCCCTCTAAGTATTTaGCACAGGCTGGTTCCTGTGCCTGGAACAACCTTC +
Preference number: 4 (lower is better)
Translates to: TRPQSSPAPLSI*HRLVPVPGTTF
Trigger: GAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATACTTAGAGGGGCAGGTGAACTTTGAGGACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR TCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCGGCTTCCACTCATTGTaGGGGGCATGGTGCTCGAAA +
Preference number: 4 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGGFHSL*GAWCSK
Trigger: TTTCGAGCACCATGCCCCTCACAATGAGTGGAAGCC...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAACTTCAGGGCCAGAGTaGCAGACAGACAACACACAC +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSTSGPE*QTDNTH
Trigger: GTGTGTGTTGTCTGTCTGTCACTCTGGCCCTGAAGT...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp TCTAAGTATTTTGCACAGGCTGGTTCCTGTGCCTGGAACAACCTTCCAACCTTAAAGGGTGGCGACAAGTaGAGGAACCTGGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: SKYFAQAGSCAWNNLPTLKGGDK*RNLGSA
Trigger: AGCTGATCCCAGGTTCCTGCACTTGTCGCCACCCTT...TAAGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATACTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR CCA 90 bp CCTGTGCCTGGAACAACCTTCCAACCTTATTCCAATGGTTGGCAGAAATGGAAATGGACTACGGAAGGGTaGCGACAAGTGCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: PVPGTTFQPYSNGWQKWKWTTEG*RQVQEP
Trigger: AGGTTCCTGCACTTGTCGCCACCCTTCCGTAGTCCA...TTTCCATTTCTGCCAACCATTGGAATAAGGTTGGAAGGTTGTTCCAGGCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR CCA 90 bp CCCACACTCACTTCGTGCTCTCTTCTACAAGCACACAGATTTTTCTCTGCATGTTGGACTACGGAAGGGTaGCGACAAGTGCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: PTLTSCSLLQAHRFFSACWTTEG*RQVQEP
Trigger: AGGTTCCTGCACTTGTCGCCACCCTTCCGTAGTCCA...ACATGCAGAGAAAAATCTGTGTGCTTGTAGAAGAGAGCACGAAGTGAGTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
CDS-3UTR CCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATCCGCCATCAGGCCTGTaGACTACGGAAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYPPSGL*TTEGWR
Trigger: TCGCCACCCTTCCGTAGTCCACAGGCCTGATGGCGG...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR GCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCGTTCATGGGAACCTGTaGCGGGCCCATCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFVHGNL*RAHRLS
Trigger: GCTGAGCCGATGGGCCCGGCACAGGTTCCCATGAAC...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343280.8
ENST00000356584.8
CDS-3UTR GCA 90 bp AGCACACAGATTTTTCTCTGCATGTTGGTCTGCCAAGGGATGGGAAAGGGGTGGGGGTGGTTTAAGCAATaGAAGACTACCTTTCCTACC +
Preference number: 4 (lower is better)
Translates to: STQIFLCMLVCQGMGKGWGWFKQ*KTTFPT
Trigger: GGTAGGAAAGGTAGTCTTGCATTGCTTAAACCACCC...CCACCCCTTTCCCATCCCTTGGCAGACCAACATGCAGAGAAAAATCTGTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
CDS-3UTR GCA 90 bp AGCACACAGATTTTTCTCTGCATGTTGGTCTGCCAAGGGATGGGAAAGGGGTGGACACAGATTTTTCTCTaGATGTTGGTCTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: STQIFLCMLVCQGMGKGWTQIFL*MLVCQG
Trigger: CCCTTGGCAGACCAACATGCAGAGAAAAATCTGTGT...CCACCCCTTTCCCATCCCTTGGCAGACCAACATGCAGAGAAAAATCTGTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
CDS-3UTR CCA 90 bp ATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGGCCTCCGCCATCAGGCCTGTaGACTACGGAAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: MSVIMLNKETELSPILRPPPSGL*TTEGWR
Trigger: TCGCCACCCTTCCGTAGTCCACAGGCCTGATGGCGG...AGGCCTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425074.3
CDS-3UTR CCA 90 bp ACAAGGGACGTAATTCATGTTGCTCCCAGACACATTAGAGATTATCACAACAAACCGCCATCAGGCCTGTaGACTACGGAAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: TRDVIHVAPRHIRDYHNKPPSGL*TTEGWR
Trigger: TCGCCACCCTTCCGTAGTCCACAGGCCTGATGGCGG...TTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAACATGAATTACGTCCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCACAGCACACACATGTATaGTTTCTGCCCTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSQHTHV*FLPWVC
Trigger: ACACACCCAGGGCAGAAACCATACATGTGTGTGCTG...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCACTTGGTGTTGCTGTGTaGCTTCCACTCATTGTGAGG +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSLGVAV*LPLIVR
Trigger: CCTCACAATGAGTGGAAGCCACACAGCAACACCAAG...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCGGCTTCCCATATAGCTaGCACTCGGAAGAACCTCCC +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFGFPYS*HSEEPP
Trigger: GGGAGGTTCTTCCGAGTGCCAGCTATATGGGAAGCC...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CTTCGTGCTCTCTTCTACAAGCACACAGATTTTTCTCTGCATGTTGGTCTGCCACTTCTGGCCCCAGGCTaGTGTAAATGCTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LRALFYKHTDFSLHVGLPLLAPG*CKCCLH
Trigger: ATGGAGACAGCATTTACACCAGCCTGGGGCCAGAAG...TGGCAGACCAACATGCAGAGAAAAATCTGTGTGCTTGTAGAAGAGAGCACGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR TCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTCCACAATTACTTCTaGGTTCATGGGAACCTGTGC +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSVHNYF*VHGNLC
Trigger: GCACAGGTTCCCATGAACTCAGAAGTAATTGTGGAC...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
CDS-3UTR TCA 90 bp AGTATTTTGCACAGGCTGGTTCCTGTGCCTGGAACAACCTTCCAACCTTATTCCGTCCACAATTACTTCTaGGTTCATGGGAACCTGTGC +
Preference number: 4 (lower is better)
Translates to: SILHRLVPVPGTTFQPYSVHNYF*VHGNLC
Trigger: GCACAGGTTCCCATGAACTCAGAAGTAATTGTGGAC...GGAATAAGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR TCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCTGCCTTTTTCCACAGTaGGAGGCCTCCTCACACTTG +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFCLFPQ*EASSHL
Trigger: CAAGTGTGAGGAGGCCTCTCACTGTGGAAAAAGGCA...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAAGAACCTCCCCAGGGTaGGTGTTTGAGTGTATAAAG +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSRTSPG*VFECIK
Trigger: CTTTATACACTCAAACACTCACCCTGGGGAGGTTCT...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAAAGCTGGCATTATGCTaGTACCAAAGCCAAACCTGG +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSKLALC*YQSQTW
Trigger: CCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTT...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp GGTTCCAATGCAGTCCCACACTCACTTCGTGCTCTCTTCTACAAGCACACAGATATGTGCTTTCTTGCATaGGTAGTTGTTCAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: GSNAVPHSLRALFYKHTDMCFLA*VVVQLV
Trigger: CACGAGCTGAACAACTACTCATGCAAGAAAGCACAT...ATCTGTGTGCTTGTAGAAGAGAGCACGAAGTGAGTGTGGGACTGCATTGGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
CDS-3UTR TCA 90 bp CCCACACTCACTTCGTGCTCTCTTCTACAAGCACACAGATTTTTCTCTGCATGTTCCTTTCACGGGGGTTaGAAGGAATTTGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PTLTSCSLLQAHRFFSACSFHGG*KEFASG
Trigger: GCCAGAAGCAAATTCCTTTCAACCCCCGTGAAAGGA...ACATGCAGAGAAAAATCTGTGTGCTTGTAGAAGAGAGCACGAAGTGAGTGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR GCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCACATGGTGCTCGAAAATaGTTGAGCTGGCTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSHGARK*LSWLGS
Trigger: ACTTCCTAGCCAGCTCAAGCATTTTCGAGCACCATG...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR GCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATCATGCCAACAACCTGTaGCGGGCCCATCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: NISVNPHNGARVMETHVDHANNL*RAHRLS
Trigger: GCTGAGCCGATGGGCCCGGCACAGGTTGTTGGCATG...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427512.6
CDS-3UTR GCA 90 bp CAGGCTGGTTCCTGTGCCTGGAACAACCTTCCAACCTTATTCCAATGGTTGGCATATATAACACCACAATaGTGGAGAGCGTATTGGGTG +
Preference number: 4 (lower is better)
Translates to: QAGSCAWNNLPTLFQWLAYITPQ*WRAYWV
Trigger: CACCCAATACGCTCTCCAGCATTGTGGTGTTATATA...TGCCAACCATTGGAATAAGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR CCA 90 bp CCAGCTGAGACTCAGGTTCCTTTCACGGGGGTTGAAAGGAATTTGCTTCTGGCCTCTGACATTGCGTTCTaGAAACTAAACCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: PAETQVPFTGVERNLLLASDIAF*KLNQWI
Trigger: AATCCACTGGTTTAGTTTCCAGAACGCAATGTCAGA...GGCCAGAAGCAAATTCCTTTCAACCCCCGTGAAAGGAACCTGAGTCTCAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR CCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATCCGCCATCAGGCCTGTaGACTACGGAAGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: NISVNPHNGARVMETHVDPPSGL*TTEGWR
Trigger: TCGCCACCCTTCCGTAGTCCACAGGCCTGATGGCGG...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCGGAAACCTCTGCCAGTaGTCAGCAGAACAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFGNLCQ*SAEQSS
Trigger: GGAGCTTTGTTCTGCTGACCACTGGCAGAGGTTTCC...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCGGATCAATAGTTGCCTaGGGATGGGTGAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGGSIVA*GWVKER
Trigger: CCTTTCCTTCACCCATCCCCAGGCAACTATTGATCC...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CCTGTGCCTGGAACAACCTTCCAACCTTATTCCAATGGTTGGCAGAAATGGAAAATAACACCACAATGCTaGAGAGCGTATTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PVPGTTFQPYSNGWQKWKITPQC*RAYWVG
Trigger: CCCCACCCAATACGCTCTCCAGCATTGTGGTGTTAT...TTTCCATTTCTGCCAACCATTGGAATAAGGTTGGAAGGTTGTTCCAGGCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR CCA 90 bp TCTAAGTATTTTGCACAGGCTGGTTCCTGTGCCTGGAACAACCTTCCAACCTTAGCTGGTTCCTGTGCCTaGAACAACCTTCCAACCTTA +
Preference number: 4 (lower is better)
Translates to: SKYFAQAGSCAWNNLPTLAGSCA*NNLPTL
Trigger: TAAGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGC...TAAGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATACTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR CCA 90 bp CACACTCACTTCGTGCTCTCTTCTACAAGCACACAGATTTTTCTCTGCATGTTGGTGTTCTTCTGTGCCTaGGCAGCACCAGGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: HTHFVLSSTSTQIFLCMLVFFCA*AAPGSN
Trigger: ATTGGAACCTGGTGCTGCCCAGGCACAGAAGAACAC...CAACATGCAGAGAAAAATCTGTGTGCTTGTAGAAGAGAGCACGAAGTGAGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR TCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCATCAGGTCAGGTGTCTTaGAGGCTAGAAAAATTCGTC +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSSGQVS*RLEKFV
Trigger: GACGAATTTTTCTAGCCTTCAAGACACCTGACCTGA...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCTTTCTGCACCAACTATaGTTCCTACCTGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGFLHQL*FLPGPS
Trigger: AGAAGGCCCAGGTAGGAATCATAGTTGGTGCAGAAA...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTAAGGGTGGCGACAAGTaGAGGAACCTGGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPKGGDK*RNLGSA
Trigger: AGCTGATCCCAGGTTCCTGCACTTGTCGCCACCCTT...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCTCCTCAAAGTTCACCTaGCCCTGTATAGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFSSKFT*PCIGST
Trigger: TGTGGACCCTATACAGGGGCAGGTGAACTTTGAGGA...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343280.8
ENST00000356584.8
CDS-3UTR GCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCCGAGATCGCGCCACTaGACTCCAACCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISPRSRH*TPTWMT
Trigger: TGTCATCCAGGTTGGAGTGCAGTGGCGCGATCTCGG...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp GGGGCATGGTGCTCGAAAATGCTTGAGCTGGCTAGGAAGTCCTTACAAGCCTCCTGGAAACTAAACCAGTaGATTAATGGAAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: GAWCSKMLELARKSLQASWKLNQ*INGKAN
Trigger: GTTTGCTTTTCCATTAATCCACTGGTTTAGTTTCCA...GGAGGCTTGTAAGGACTTCCTAGCCAGCTCAAGCATTTTCGAGCACCATGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425074.3
CDS-3UTR CCA 90 bp CCTCAAAGTTCACCTGCCCCTCTAAGTATTTTGCACAGGCTGGTTCCTGTGCCTTCTGACATTGCGTTCTaGAAACTAAACCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: PQSSPAPLSILHRLVPVPSDIAF*KLNQWI
Trigger: AATCCACTGGTTTAGTTTCCAGAACGCAATGTCAGA...AGGCACAGGAACCAGCCTGTGCAAAATACTTAGAGGGGCAGGTGAACTTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR CCA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGACAAGTGCAGGAACCTaGGATCAGCTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKTSAGT*DQLSRA
Trigger: GGCCCTGGACAGCTGATCCCAGGTTCCTGCACTTGT...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCACAAGTGCAGGAACCTaGGATCAGCTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISTSAGT*DQLSRA
Trigger: GGCCCTGGACAGCTGATCCCAGGTTCCTGCACTTGT...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACAGGGTCACTCCCACCTaGAGTCTCTGTGGCAACAGC +
Preference number: 4 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNRVTPT*SLCGNS
Trigger: GCTGTTGCCACAGAGACTCCAGGTGGGAGTGACCCT...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343280.8
CDS-3UTR CCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCCTTGGTGTTGCTGTGTaGCTTCCACTCATTGTGAGG +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFLGVAV*LPLIVR
Trigger: CCTCACAATGAGTGGAAGCCACACAGCAACACCAAG...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCCAGCACAAAGACAGATaGCTTCTAACAGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFQHKDR*LLTGTA
Trigger: GGCAGTGCCTGTTAGAAGCCATCTGTCTTTGTGCTG...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCACCTACCTGGGCCTTCTaGAGGACAGCCAATATCAAC +
Preference number: 4 (lower is better)
Translates to: SSEHVTHTKIAHILGHKAPTWAF*RTANIN
Trigger: GTTGATATTGGCTGTCCTCCAGAAGGCCCAGGTAGG...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp TCTAAGTATTTTGCACAGGCTGGTTCCTGTGCCTGGAACAACCTTCCAACCTTAGTATTTTGCACAGGCTaGTTCCTGTGCCTGGAACAA +
Preference number: 4 (lower is better)
Translates to: SKYFAQAGSCAWNNLPTLVFCTG*FLCLEQ
Trigger: TTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATAC...TAAGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATACTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR CCA 90 bp TTTTTCTCTGCATGTTGGTCTGCCAAGGGATGGGAAAGGGGTGGTTTAAGCAATGGGATGGGAAAGGGGTaGTTTAAGCAATGCAAGACT +
Preference number: 4 (lower is better)
Translates to: FFSACWSAKGWERGGLSNGMGKG*FKQCKT
Trigger: AGTCTTGCATTGCTTAAACCACCCCTTTCCCATCCC...ATTGCTTAAACCACCCCTTTCCCATCCCTTGGCAGACCAACATGCAGAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
CDS-3UTR CCA 90 bp GAAAGGGGTGGTTTAAGCAATGCAAGACTACCTTTCCTACCCACTTCAATGCCTGGGATGGGAAAGGGGTaGTTTAAGCAATGCAAGACT +
Preference number: 4 (lower is better)
Translates to: ERGGLSNARLPFLPTSMPGMGKG*FKQCKT
Trigger: AGTCTTGCATTGCTTAAACCACCCCTTTCCCATCCC...AGGCATTGAAGTGGGTAGGAAAGGTAGTCTTGCATTGCTTAAACCACCCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
3UTR CAA 72 bp CCAGAATATGAGGCAGCCAATTTCAGGTCAGGTGTCTaGAAGGCTAGAAAAATTCGTCCCAAGTGCCATGTG +
Preference number: 4 (lower is better)
Translates to: PEYEAANFRSGV*KARKIRPKCHV
Trigger: CACATGGCACTTGGGACGAATTTTTCTAGCCTTCAAGACACCTGACCTGAAATTGGCTGCCTCATATTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CCTGTCACAAAAGACATCTCCATTGATTGCACAGCACAGTTGTTCAGAAGAAAGCTGTCACCTCAGGTCTaGCATTGCGTTCTGGAAACT +
Preference number: 4 (lower is better)
Translates to: PVTKDISIDCTAQLFRRKLSPQV*HCVLET
Trigger: AGTTTCCAGAACGCAATGTCAGACCTGAGGTGACAG...CTTTCTTCTGAACAACTGTGCTGTGCAATCAATGGAGATGTCTTTTGTGACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425074.3
CDS-3UTR TCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCGTCCACAATTACTTCTaGGTTCATGGGAACCTGTGC +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFVHNYF*VHGNLC
Trigger: GCACAGGTTCCCATGAACTCAGAAGTAATTGTGGAC...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343280.8
ENST00000356584.8
CDS-3UTR TCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCGGCTTCCACTCATTGTaGGGGGCATGGTGCTCGAAA +
Preference number: 4 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFGFHSL*GAWCSK
Trigger: TTTCGAGCACCATGCCCCTCACAATGAGTGGAAGCC...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp GTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGGCCTTTCTCCTGCCTTTTTCCACAGTaGGAGGCCTCCTCACACTTG +
Preference number: 4 (lower is better)
Translates to: VIMLNKETELSPILRPFSCLFPQ*EASSHL
Trigger: CAAGTGTGAGGAGGCCTCTCACTGTGGAAAAAGGCA...GGAGAAAGGCCTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425074.3
CDS-3UTR TCA 90 bp CTTCTACAAGCACACAGATTTTTCTCTGCATGTTGGTCTGCCAAGGGATGGGAAATGTGCTTTCTTGCATaGGTAGTTGTTCAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: LLQAHRFFSACWSAKGWEMCFLA*VVVQLV
Trigger: CACGAGCTGAACAACTACTCATGCAAGAAAGCACAT...TTCCCATCCCTTGGCAGACCAACATGCAGAGAAAAATCTGTGTGCTTGTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
CDS-3UTR GCA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGAAGGGTGGCGACAAGTaGAGGAACCTGGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKKGGDK*RNLGSA
Trigger: AGCTGATCCCAGGTTCCTGCACTTGTCGCCACCCTT...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR GCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGACATCTCCATTGATTaGACAGCACAGTTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSDISID*TAQLFR
Trigger: TCTGAACAACTGTGCTGTGCAATCAATGGAGATGTC...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR GCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCATGAAGGGAAACCTCTaGCAGTGGTCAGCAGAACAA +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFMKGNL*QWSAEQ
Trigger: TTGTTCTGCTGACCACTGGCAGAGGTTTCCCTTCAT...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp AGTCCCACACTCACTTCGTGCTCTCTTCTACAAGCACACAGATTTTTCTCTGCAACACAGATTTTTCTCTaGATGTTGGTCTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: SPTLTSCSLLQAHRFFSATQIFL*MLVCQG
Trigger: CCCTTGGCAGACCAACATGCAGAGAAAAATCTGTGT...TGCAGAGAAAAATCTGTGTGCTTGTAGAAGAGAGCACGAAGTGAGTGTGGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
CDS-3UTR CCA 90 bp CCAGCTGAGACTCAGGTTCCTTTCACGGGGGTTGAAAGGAATTTGCTTCTGGCCTGGAAACTAAACCAGTaGATTAATGGAAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: PAETQVPFTGVERNLLLAWKLNQ*INGKAN
Trigger: GTTTGCTTTTCCATTAATCCACTGGTTTAGTTTCCA...GGCCAGAAGCAAATTCCTTTCAACCCCCGTGAAAGGAACCTGAGTCTCAGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR CCA 90 bp TCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGACAAGTGCAGGAACCTaGGATCAGCTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SDVSYYVEQGNGIISHPKTSAGT*DQLSRA
Trigger: GGCCCTGGACAGCTGATCCCAGGTTCCTGCACTTGT...CTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425074.3
CDS-3UTR CCA 90 bp ACAAGGGACGTAATTCATGTTGCTCCCAGACACATTAGAGATTATCACAACAAATGGACTACGGAAGGGTaGCGACAAGTGCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: TRDVIHVAPRHIRDYHNKWTTEG*RQVQEP
Trigger: AGGTTCCTGCACTTGTCGCCACCCTTCCGTAGTCCA...TTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAACATGAATTACGTCCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACTGGACTACGGAAGGGTaGCGACAAGTGCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNWTTEG*RQVQEP
Trigger: AGGTTCCTGCACTTGTCGCCACCCTTCCGTAGTCCA...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCTGGACTACGGAAGGGTaGCGACAAGTGCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISWTTEG*RQVQEP
Trigger: AGGTTCCTGCACTTGTCGCCACCCTTCCGTAGTCCA...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATACACCTGGAGTCTCTGTaGCAACAGCTAGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIHLESL*QQLGSC
Trigger: ACATGACCCTAGCTGTTGCCACAGAGACTCCAGGTG...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343280.8
CDS-3UTR CCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATAACTATGATTCCTACCTaGGCCTTCTGGAGGACAGCC +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFITMIPT*AFWRTA
Trigger: GGCTGTCCTCCAGAAGGCCCAGGTAGGAATCATAGT...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp GTATTTTGCACAGGCTGGTTCCTGTGCCTGGAACAACCTTCCAACCTTATTCCACCAACCTTATTCCAATaGTTGGCAGAAATGGAAACC +
Preference number: 4 (lower is better)
Translates to: VFCTGWFLCLEQPSNLIPPTLFQ*LAEMET
Trigger: GGTTTCCATTTCTGCCAACCATTGGAATAAGGTTGG...TGGAATAAGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR TCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATCTGTCACCTCAGGTCTaGCATTGCGTTCTGGAAACT +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYLSPQV*HCVLET
Trigger: AGTTTCCAGAACGCAATGTCAGACCTGAGGTGACAG...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR TCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTCTGTCACCTCAGGTCTaGCATTGCGTTCTGGAAACT +
Preference number: 4 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPLSPQV*HCVLET
Trigger: AGTTTCCAGAACGCAATGTCAGACCTGAGGTGACAG...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTACTACCCATCACCAGTaGGGCAACTATGTGGGACAT +
Preference number: 4 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPTTHHQ*GNYVGH
Trigger: ATGTCCCACATAGTTGCCTCACTGGTGATGGGTAGT...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343280.8
CDS-3UTR TCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCGGGAATCCTGATCTGTaGCATTCCTATAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGGNPDL*HSYRKA
Trigger: AGCTTTTCTATAGGAATGTCACAGATCAGGATTCCC...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGTGCCTTTTTCCACAGTaGGAGGCCTCCTCACACTTG +
Preference number: 4 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKCLFPQ*EASSHL
Trigger: CAAGTGTGAGGAGGCCTCTCACTGTGGAAAAAGGCA...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR TCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCCCCAGGGTGAGTGTTTaGGTGTATAAAGTTCTACTT +
Preference number: 4 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGPRVSV*VYKVLL
Trigger: AAGTAGAACTTTATACACTCAAACACTCACCCTGGG...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCACTTCAGGGCCAGAGTaGCAGACAGACAACACACAC +
Preference number: 4 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFTSGPE*QTDNTH
Trigger: GTGTGTGTTGTCTGTCTGTCACTCTGGCCCTGAAGT...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACACTTCAGGGCCAGAGTaGCAGACAGACAACACACAC +
Preference number: 4 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNTSGPE*QTDNTH
Trigger: GTGTGTGTTGTCTGTCTGTCACTCTGGCCCTGAAGT...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAAAACCACATCAAGCTTaGTGGGAGGTAATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSKPHQA*WEVIKA
Trigger: TGCTTTAATTACCTCCCATCAAGCTTGATGTGGTTT...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCAAAGGGTGGCGACAAGTaGAGGAACCTGGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: THKANRILKISDSLKIKAKGGDK*RNLGSA
Trigger: AGCTGATCCCAGGTTCCTGCACTTGTCGCCACCCTT...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATACACATGTATGGTTTCTaGCCTGGGTGTGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIHMYGF*PGCVSW
Trigger: CCAGGAAACACACCCAGGGCAGAAACCATACATGTG...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATACCTCACACTTGGTGTTaGTGTGTGGCTTCCACTCAT +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIPHTWC*CVASTH
Trigger: ATGAGTGGAAGCCACACAGCAACACCAAGTGTGAGG...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATCCTCACACTTGGTGTTaGTGTGTGGCTTCCACTCAT +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYPHTWC*CVASTH
Trigger: ATGAGTGGAAGCCACACAGCAACACCAAGTGTGAGG...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR GCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTCCTCACACTTGGTGTTaGTGTGTGGCTTCCACTCAT +
Preference number: 4 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPPHTWC*CVASTH
Trigger: ATGAGTGGAAGCCACACAGCAACACCAAGTGTGAGG...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATCAACGGATCAATAGTTaGCTGGGGATGGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYQRINS*LGMGEG
Trigger: TCCTTCACCCATCCCCAGGCAACTATTGATCCGTTG...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGACAACGGATCAATAGTTaGCTGGGGATGGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGQRINS*LGMGEG
Trigger: TCCTTCACCCATCCCCAGGCAACTATTGATCCGTTG...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACAAGGGACGTAATTCATGTTGCTCCCAGACACATTAGAGATTATCACAACAAATCATCCTCCATTCCATaGCAACAACCCAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: TRDVIHVAPRHIRDYHNKSSSIP*QQPREA
Trigger: GGCCTCTCTGGGTTGTTGGCATGGAATGGAGGATGA...TTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAACATGAATTACGTCCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356584.8
CDS-3UTR CCA 90 bp TCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGTGGACTACGGAAGGGTaGCGACAAGTGCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: SDVSYYVEQGNGIISHPKWTTEG*RQVQEP
Trigger: AGGTTCCTGCACTTGTCGCCACCCTTCCGTAGTCCA...CTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425074.3
CDS-3UTR CCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATCAGCACACACATGTATaGTTTCTGCCCTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYQHTHV*FLPWVC
Trigger: ACACACCCAGGGCAGAAACCATACATGTGTGTGCTG...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATACAGCACACACATGTATaGTTTCTGCCCTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIQHTHV*FLPWVC
Trigger: ACACACCCAGGGCAGAAACCATACATGTGTGTGCTG...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATCTTGGTGTTGCTGTGTaGCTTCCACTCATTGTGAGG +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYLGVAV*LPLIVR
Trigger: CCTCACAATGAGTGGAAGCCACACAGCAACACCAAG...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCAGGCTTCCCATATAGCTaGCACTCGGAAGAACCTCCC +
Preference number: 4 (lower is better)
Translates to: THKANRILKISDSLKIKAGFPYS*HSEEPP
Trigger: GGGAGGTTCTTCCGAGTGCCAGCTATATGGGAAGCC...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTCAGCACAAAGACAGATaGCTTCTAACAGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPQHKDR*LLTGTA
Trigger: GGCAGTGCCTGTTAGAAGCCATCTGTCTTTGTGCTG...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCATCTTTTGAAACACATTaGGGTTACTTTGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSSFETH*GYFGTR
Trigger: CCTTGTGCCAAAGTAACCCCAATGTGTTTCAAAAGA...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCGGAAACCTCTGCCAGTaGTCAGCAGAACAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISGNLCQ*SAEQSS
Trigger: GGAGCTTTGTTCTGCTGACCACTGGCAGAGGTTTCC...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCCTACCTGGGCCTTCTaGAGGACAGCCAATATCAAC +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISPTWAF*RTANIN
Trigger: GTTGATATTGGCTGTCCTCCAGAAGGCCCAGGTAGG...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCACTATGATTCCTACCTaGGCCTTCTGGAGGACAGCC +
Preference number: 4 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFTMIPT*AFWRTA
Trigger: GGCTGTCCTCCAGAAGGCCCAGGTAGGAATCATAGT...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCCTGTCACCTCAGGTCTaGCATTGCGTTCTGGAAACT +
Preference number: 4 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCLSPQV*HCVLET
Trigger: AGTTTCCAGAACGCAATGTCAGACCTGAGGTGACAG...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATGTCCACAATTACTTCTaGGTTCATGGGAACCTGTGC +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYVHNYF*VHGNLC
Trigger: GCACAGGTTCCCATGAACTCAGAAGTAATTGTGGAC...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
CDS-3UTR TCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATATTTCTGCACCAACTATaGTTCCTACCTGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIFLHQL*FLPGPS
Trigger: AGAAGGCCCAGGTAGGAATCATAGTTGGTGCAGAAA...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCAGGAAACTTTTGGTTTaGGAAGTGCCAACATGTATC +
Preference number: 4 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGRKLLV*EVPTCI
Trigger: GATACATGTTGGCACTTCTCAAACCAAAAGTTTCCT...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATGGCTTTGTTCTTGTGTaGGTTCTCTCCTGGATCACT +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYGFVLV*VLSWIT
Trigger: AGTGATCCAGGAGAGAACTCACACAAGAACAAAGCC...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATAAAGCTGGCATTATGCTaGTACCAAAGCCAAACCTGG +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIKLALC*YQSQTW
Trigger: CCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTT...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp ACAAGGGACGTAATTCATGTTGCTCCCAGACACATTAGAGATTATCACAACAAAACTCTTCCAGAGAGCTaGAGAGCAGGAATACTTCCC +
Preference number: 4 (lower is better)
Translates to: TRDVIHVAPRHIRDYHNKTLPES*RAGILP
Trigger: GGGAAGTATTCCTGCTCTTCAGCTCTCTGGAAGAGT...TTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAACATGAATTACGTCCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCACTCTTCCAGAGAGCTaGAGAGCAGGAATACTTCCC +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISTLPES*RAGILP
Trigger: GGGAAGTATTCCTGCTCTTCAGCTCTCTGGAAGAGT...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATCCCAAAGGTTTGAAATaGAGGACCTCAGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYPKGLK*RTSASM
Trigger: CATGGAAGCTGAGGTCCTTCATTTCAAACCTTTGGG...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGACCCAAAGGTTTGAAATaGAGGACCTCAGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGPKGLK*RTSASM
Trigger: CATGGAAGCTGAGGTCCTTCATTTCAAACCTTTGGG...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCTCCTCAAAGTTCACCTaGCCCTGTATAGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCSSKFT*PCIGST
Trigger: TGTGGACCCTATACAGGGGCAGGTGAACTTTGAGGA...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343280.8
ENST00000356584.8
CDS-3UTR GCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCCACATGTATGGTTTCTaGCCTGGGTGTGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCHMYGF*PGCVSW
Trigger: CCAGGAAACACACCCAGGGCAGAAACCATACATGTG...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGGCCTCACATGTATGGTTTCTaGCCTGGGTGTGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: MSVIMLNKETELSPILRPHMYGF*PGCVSW
Trigger: CCAGGAAACACACCCAGGGCAGAAACCATACATGTG...AGGCCTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425074.3
CDS-3UTR GCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATCATGGTGCTCGAAAATaGTTGAGCTGGCTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYHGARK*LSWLGS
Trigger: ACTTCCTAGCCAGCTCAAGCATTTTCGAGCACCATG...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR GCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCCCTCACACTTGGTGTTaGTGTGTGGCTTCCACTCAT +
Preference number: 4 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCPHTWC*CVASTH
Trigger: ATGAGTGGAAGCCACACAGCAACACCAAGTGTGAGG...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAGCTTCTAACAGGCACTaGCTTGACGAAATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGASNRH*LDEIPA
Trigger: TGCTGGAATTTCGTCAAGGCAGTGCCTGTTAGAAGC...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGCAACGGATCAATAGTTaGCTGGGGATGGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKQRINS*LGMGEG
Trigger: TCCTTCACCCATCCCCAGGCAACTATTGATCCGTTG...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCTCTGACATTGCGTTCTaGAAACTAAACCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGSDIAF*KLNQWI
Trigger: AATCCACTGGTTTAGTTTCCAGAACGCAATGTCAGA...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTTGGTGTTGCTGTGTaGCTTCCACTCATTGTGAGG +
Preference number: 4 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNLGVAV*LPLIVR
Trigger: CCTCACAATGAGTGGAAGCCACACAGCAACACCAAG...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCCATAAAGGCTATGCTTaGAGCTTCTCTCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFHKGYA*SFSLMS
Trigger: TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCCAGCACAAAGACAGATaGCTTCTAACAGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCQHKDR*LLTGTA
Trigger: GGCAGTGCCTGTTAGAAGCCATCTGTCTTTGTGCTG...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATAACATTGGGGTTACTTTaGCACAAGGCAGGACTCTTC +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFITLGLL*HKAGLF
Trigger: GAAGAGTCCTGCCTTGTGCCAAAGTAACCCCAATGT...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCTCTTTTGAAACACATTaGGGTTACTTTGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGSFETH*GYFGTR
Trigger: CCTTGTGCCAAAGTAACCCCAATGTGTTTCAAAAGA...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAAACCATATAGGATTATaGTCACCAGAGTCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSNHIGL*SPESKK
Trigger: TTTCTTGGACTCTGGTGACCATAATCCTATATGGTT...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCAGGAGTGACAAACAGATaGACGGACAGACAGATGTAT +
Preference number: 4 (lower is better)
Translates to: SSEHVTHTKIAHILGHKAGVTNR*TDRQMY
Trigger: ATACATCTGTCTGTCCGTCCATCTGTTTGTCACTCC...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCCACTCTAGAGATAGATaGATGGATGGAGTGACAAAC +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFHSRDR*MDGVTN
Trigger: GTTTGTCACTCCATCCATCCATCTATCTCTAGAGTG...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp ACCCACTTCAATGCCTTTCTTCTTGATATTATGTTAAAATCAGGTACTCCGATCTGGTCTGCCAAGGGATaGGAAAGGGGTGGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: THFNAFLLDIMLKSGTPIWSAKG*ERGGLS
Trigger: GCTTAAACCACCCCTTTCCCATCCCTTGGCAGACCA...GATCGGAGTACCTGATTTTAACATAATATCAAGAAGAAAGGCATTGAAGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
3UTR CAA 72 bp GTCACAAAAGACATCTCCATTGATTGCACAGCACAGTaGTTCAGAAGAAAGGGCCTGCTCTTATCACTTCTA +
Preference number: 4 (lower is better)
Translates to: VTKDISIDCTAQ*FRRKGLLLSLL
Trigger: TAGAAGTGATAAGAGCAGGCCCTTTCTTCTGAACAACTGTGCTGTGCAATCAATGGAGATGTCTTTTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425074.3
CDS-3UTR TCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCAGAACCTCCCCAGGGTaGGTGTTTGAGTGTATAAAG +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISRTSPG*VFECIK
Trigger: CTTTATACACTCAAACACTCACCCTGGGGAGGTTCT...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTGATCAACTATATCCATaGAGGGAAACCTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPDQLYP*RETSAS
Trigger: ACTGGCAGAGGTTTCCCTTCATGGATATAGTTGATC...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATTCAGGTCAGGTGTCTTaGAGGCTAGAAAAATTCGTC +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYSGQVS*RLEKFV
Trigger: GACGAATTTTTCTAGCCTTCAAGACACCTGACCTGA...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTTGCAAAACCAGAATATaGGGCAGCCAATTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPCKTRI*GSQFQV
Trigger: GACCTGAAATTGGCTGCCTCATATTCTGGTTTTGCA...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCAGGAAACTTTTGGTTTaGGAAGTGCCAACATGTATC +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFRKLLV*EVPTCI
Trigger: GATACATGTTGGCACTTCTCAAACCAAAAGTTTCCT...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGAAGCTGGCATTATGCTaGTACCAAAGCCAAACCTGG +
Preference number: 4 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKKLALC*YQSQTW
Trigger: CCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTT...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCAACTCTTCCAGAGAGCTaGAGAGCAGGAATACTTCCC +
Preference number: 4 (lower is better)
Translates to: THKANRILKISDSLKIKATLPES*RAGILP
Trigger: GGGAAGTATTCCTGCTCTTCAGCTCTCTGGAAGAGT...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCCCAAAGGTTTGAAATaGAGGACCTCAGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISPKGLK*RTSASM
Trigger: CATGGAAGCTGAGGTCCTTCATTTCAAACCTTTGGG...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCATCATCCTCCATTCCATaGCAACAACCAGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: THKANRILKISDSLKIKASSSIP*QQPGSL
Trigger: GAGTGACCCTGGTTGTTGGCATGGAATGGAGGATGA...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343280.8
CDS-3UTR GCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATCACATGTATGGTTTCTaGCCTGGGTGTGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NISVNPHNGARVMETHVDHMYGF*PGCVSW
Trigger: CCAGGAAACACACCCAGGGCAGAAACCATACATGTG...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCCATGGTGCTCGAAAATaGTTGAGCTGGCTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCHGARK*LSWLGS
Trigger: ACTTCCTAGCCAGCTCAAGCATTTTCGAGCACCATG...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCGCTTCTAACAGGCACTaGCTTGACGAAATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFASNRH*LDEIPA
Trigger: TGCTGGAATTTCGTCAAGGCAGTGCCTGTTAGAAGC...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCGCTTCTAACAGGCACTaGCTTGACGAAATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCASNRH*LDEIPA
Trigger: TGCTGGAATTTCGTCAAGGCAGTGCCTGTTAGAAGC...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACATGAAGGGAAACCTCTaGCAGTGGTCAGCAGAACAA +
Preference number: 4 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNMKGNL*QWSAEQ
Trigger: TTGTTCTGCTGACCACTGGCAGAGGTTTCCCTTCAT...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAATATTCCCTATAGTTTaGTGCAGTTTTCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSIFPIV*CSFLIP
Trigger: AGGAATGAGAAAACTGCAGCAAACTATAGGGAATAT...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp AGTCCCACACTCACTTCGTGCTCTCTTCTACAAGCACACAGATTTTTCTCTGCAATGAATGTGCTTTCTTaGATGAGTAGTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SPTLTSCSLLQAHRFFSAMNVLS*MSSCSA
Trigger: AGCTGAACAACTACTCATGCAAGAAAGCACATTCAT...TGCAGAGAAAAATCTGTGTGCTTGTAGAAGAGAGCACGAAGTGAGTGTGGGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
CDS-3UTR CCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCTCTGACATTGCGTTCTaGAAACTAAACCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFSDIAF*KLNQWI
Trigger: AATCCACTGGTTTAGTTTCCAGAACGCAATGTCAGA...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTCGAAAATGCTTGAGCTaGCTAGGAAGTCCTTACAAG +
Preference number: 4 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPRKCLS*LGSPYK
Trigger: CTTGTAAGGACTTCCTAGCCAGCTCAAGCATTTTCG...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCAGAGATACAGATAGTTaGAGCTCTCACAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFRDTDS*SSHKSC
Trigger: ACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCT...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATGGATCAATAGTTGCCTaGGGATGGGTGAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: NISVNPHNGARVMETHVDGSIVA*GWVKER
Trigger: CCTTTCCTTCACCCATCCCCAGGCAACTATTGATCC...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATGGAGTGACAAACAGATaGACGGACAGACAGATGTAT +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYGVTNR*TDRQMY
Trigger: ATACATCTGTCTGTCCGTCCATCTGTTTGTCACTCC...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATGGGAATCCTGATCTGTaGCATTCCTATAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYGNPDL*HSYRKA
Trigger: AGCTTTTCTATAGGAATGTCACAGATCAGGATTCCC...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR TCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGACCCAGGGTGAGTGTTTaGGTGTATAAAGTTCTACTT +
Preference number: 4 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGPRVSV*VYKVLL
Trigger: AAGTAGAACTTTATACACTCAAACACTCACCCTGGG...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTCAGAGGTCTGTCTTTTaGAACACATTGGGGTTACTT +
Preference number: 4 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPQRSVF*NTLGLL
Trigger: AAGTAACCCCAATGTGTTTCAAAAGACAGACCTCTG...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATCAGAGGTCTGTCTTTTaGAACACATTGGGGTTACTT +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYQRSVF*NTLGLL
Trigger: AAGTAACCCCAATGTGTTTCAAAAGACAGACCTCTG...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGATCAACTATATCCATaGAGGGAAACCTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKDQLYP*RETSAS
Trigger: ACTGGCAGAGGTTTCCCTTCATGGATATAGTTGATC...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCTGCAAAACCAGAATATaGGGCAGCCAATTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISCKTRI*GSQFQV
Trigger: GACCTGAAATTGGCTGCCTCATATTCTGGTTTTGCA...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGTGCAAAACCAGAATATaGGGCAGCCAATTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKCKTRI*GSQFQV
Trigger: GACCTGAAATTGGCTGCCTCATATTCTGGTTTTGCA...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATGAAGCCTTGGGAATATaGAGTATCTTCTGGGAACAA +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYEALGI*SIFWEQ
Trigger: TTGTTCCCAGAAGATACTTCATATTCCCAAGGCTTC...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATAGAAGCCTTGGGAATATaGAGTATCTTCTGGGAACAA +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIEALGI*SIFWEQ
Trigger: TTGTTCCCAGAAGATACTTCATATTCCCAAGGCTTC...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAGAAGCCTTGGGAATATaGAGTATCTTCTGGGAACAA +
Preference number: 4 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGEALGI*SIFWEQ
Trigger: TTGTTCCCAGAAGATACTTCATATTCCCAAGGCTTC...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCCAAAAATGTTTAGACTaGCTTCTGGACAGTAACCTT +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFQKCLD*LLDSNL
Trigger: AAGGTTACTGTCCAGAAGTCAGTCTAAACATTTTTG...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTCACAGAACACCACCATaGGCCTTAATTTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPHRTPP*ALISEF
Trigger: AAACTCTGAAATTAAGGCTCATGGTGGTGTTCTGTG...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATACACAGAACACCACCATaGGCCTTAATTTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIHRTPP*ALISEF
Trigger: AAACTCTGAAATTAAGGCTCATGGTGGTGTTCTGTG...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATGGCTTTGTTCTTGTGTaGGTTCTCTCCTGGATCACT +
Preference number: 4 (lower is better)
Translates to: NISVNPHNGARVMETHVDGFVLV*VLSWIT
Trigger: AGTGATCCAGGAGAGAACTCACACAAGAACAAAGCC...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATAGACATCTCCATTGATTaGACAGCACAGTTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIDISID*TAQLFR
Trigger: TCTGAACAACTGTGCTGTGCAATCAATGGAGATGTC...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCACATGGTGCTCGAAAATaGTTGAGCTGGCTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: THKANRILKISDSLKIKAHGARK*LSWLGS
Trigger: ACTTCCTAGCCAGCTCAAGCATTTTCGAGCACCATG...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCAATGAAGGGAAACCTCTaGCAGTGGTCAGCAGAACAA +
Preference number: 4 (lower is better)
Translates to: THKANRILKISDSLKIKAMKGNL*QWSAEQ
Trigger: TTGTTCTGCTGACCACTGGCAGAGGTTTCCCTTCAT...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCAAAATTCGTCCCAAGTaGCATGTGAGATCAACTATA +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFKIRPK*HVRSTI
Trigger: TATAGTTGATCTCACATGGCACTTGGGACGAATTTT...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACAAGGGACGTAATTCATGTTGCTCCCAGACACATTAGAGATTATCACAACAAAGATTATCACAACAAATaGCCACTGCTTAGGGTGACC +
Preference number: 4 (lower is better)
Translates to: TRDVIHVAPRHIRDYHNKDYHNK*PLLRVT
Trigger: GGTCACCCTAAGCAGTGGGCATTTGTTGTGATAATC...TTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAACATGAATTACGTCCCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGATTATCACAACAAATaGCCACTGCTTAGGGTGACC +
Preference number: 4 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKDYHNK*PLLRVT
Trigger: GGTCACCCTAAGCAGTGGGCATTTGTTGTGATAATC...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCATATTCCCTATAGTTTaGTGCAGTTTTCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGIFPIV*CSFLIP
Trigger: AGGAATGAGAAAACTGCAGCAAACTATAGGGAATAT...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCCGAAAATGCTTGAGCTaGCTAGGAAGTCCTTACAAG +
Preference number: 4 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFRKCLS*LGSPYK
Trigger: CTTGTAAGGACTTCCTAGCCAGCTCAAGCATTTTCG...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCGAAAATGCTTGAGCTaGCTAGGAAGTCCTTACAAG +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISRKCLS*LGSPYK
Trigger: CTTGTAAGGACTTCCTAGCCAGCTCAAGCATTTTCG...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATACATAAAGGCTATGCTTaGAGCTTCTCTCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIHKGYA*SFSLMS
Trigger: TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATACATTGGGGTTACTTTaGCACAAGGCAGGACTCTTC +
Preference number: 4 (lower is better)
Translates to: NISVNPHNGARVMETHVDTLGLL*HKAGLF
Trigger: GAAGAGTCCTGCCTTGTGCCAAAGTAACCCCAATGT...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCGAATCAGGAAACTTTTaGTTTGAGAAGTGCCAACAT +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFESGNF*FEKCQH
Trigger: ATGTTGGCACTTCTCAAACCAAAAGTTTCCTGATTC...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATCACTCTAGAGATAGATaGATGGATGGAGTGACAAAC +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYHSRDR*MDGVTN
Trigger: GTTTGTCACTCCATCCATCCATCTATCTCTAGAGTG...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATCAACTATGTGGGACATaGAAGATGTATGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: NISVNPHNGARVMETHVDQLCGT*KMYVPE
Trigger: CTCTGGGACATACATCTTTCATGTCCCACATAGTTG...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343280.8
CDS-3UTR TCA 90 bp ATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGGCCTGGGAATCCTGATCTGTaGCATTCCTATAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: MSVIMLNKETELSPILRPGNPDL*HSYRKA
Trigger: AGCTTTTCTATAGGAATGTCACAGATCAGGATTCCC...AGGCCTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425074.3
CDS-3UTR TCA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGGGAATCCTGATCTGTaGCATTCCTATAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKGNPDL*HSYRKA
Trigger: AGCTTTTCTATAGGAATGTCACAGATCAGGATTCCC...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR TCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCCAGAGGTCTGTCTTTTaGAACACATTGGGGTTACTT +
Preference number: 4 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCQRSVF*NTLGLL
Trigger: AAGTAACCCCAATGTGTTTCAAAAGACAGACCTCTG...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCACAAAAATGTTTAGACTaGCTTCTGGACAGTAACCTT +
Preference number: 4 (lower is better)
Translates to: SSEHVTHTKIAHILGHKAQKCLD*LLDSNL
Trigger: AAGGTTACTGTCCAGAAGTCAGTCTAAACATTTTTG...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCACCTATAGAAAAGCTCTaGTCAAAAGGTATCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSEHVTHTKIAHILGHKAPIEKL*SKGISS
Trigger: TGAAGAGATACCTTTTGAGCAGAGCTTTTCTATAGG...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCGACATCTCCATTGATTaGACAGCACAGTTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISDISID*TAQLFR
Trigger: TCTGAACAACTGTGCTGTGCAATCAATGGAGATGTC...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR GCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCGACATCTCCATTGATTaGACAGCACAGTTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCDISID*TAQLFR
Trigger: TCTGAACAACTGTGCTGTGCAATCAATGGAGATGTC...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCAGATTATCACAACAAATaGCCACTGCTTAGGGTGACC +
Preference number: 4 (lower is better)
Translates to: THKANRILKISDSLKIKADYHNK*PLLRVT
Trigger: GGTCACCCTAAGCAGTGGGCATTTGTTGTGATAATC...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCATATTCCCTATAGTTTaGTGCAGTTTTCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFIFPIV*CSFLIP
Trigger: AGGAATGAGAAAACTGCAGCAAACTATAGGGAATAT...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATAAAGGCTATGCTTaGAGCTTCTCTCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISHKGYA*SFSLMS
Trigger: TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CCA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCAATAAAGTTCTACTTCTaGCTGTCGGCTACACATAAA +
Preference number: 4 (lower is better)
Translates to: SSEHVTHTKIAHILGHKAIKFYF*LSATHK
Trigger: TTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTAT...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATAAGAGATACAGATAGTTaGAGCTCTCACAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIRDTDS*SSHKSC
Trigger: ACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCT...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAAGAGATACAGATAGTTaGAGCTCTCACAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGRDTDS*SSHKSC
Trigger: ACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCT...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGCACTCTAGAGATAGATaGATGGATGGAGTGACAAAC +
Preference number: 4 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKHSRDR*MDGVTN
Trigger: GTTTGTCACTCCATCCATCCATCTATCTCTAGAGTG...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR CAA 72 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTaGTGTGAGTTCTCTCCTGGATCACTTGCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: QFKVMTDTVALF*CEFSPGSLALK
Trigger: TTTCAAAGCAAGTGATCCAGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATCACAGAACACCACCATaGGCCTTAATTTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: NISVNPHNGARVMETHVDHRTPP*ALISEF
Trigger: AAACTCTGAAATTAAGGCTCATGGTGGTGTTCTGTG...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCAAACCACATCAAGCTTaGTGGGAGGTAATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISKPHQA*WEVIKA
Trigger: TGCTTTAATTACCTCCCATCAAGCTTGATGTGGTTT...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGTCTGACATTGCGTTCTaGAAACTAAACCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKSDIAF*KLNQWI
Trigger: AATCCACTGGTTTAGTTTCCAGAACGCAATGTCAGA...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCAGTGAGGCAACTATGTaGGACATGAAAGATGTATGT +
Preference number: 4 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFSEATM*DMKDVC
Trigger: ACATACATCTTTCATGTCCCACATAGTTGCCTCACT...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343280.8
CDS-3UTR CCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCACATAAAGGCTATGCTTaGAGCTTCTCTCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: THKANRILKISDSLKIKAHKGYA*SFSLMS
Trigger: TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATAAAGTTCTACTTCTaGCTGTCGGCTACACATAAA +
Preference number: 4 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGIKFYF*LSATHK
Trigger: TTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTAT...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATAAACCATATAGGATTATaGTCACCAGAGTCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFINHIGL*SPESKK
Trigger: TTTCTTGGACTCTGGTGACCATAATCCTATATGGTT...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATAACCATATAGGATTATaGTCACCAGAGTCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYNHIGL*SPESKK
Trigger: TTTCTTGGACTCTGGTGACCATAATCCTATATGGTT...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
3UTR CAA 72 bp TTGTTCTTGTGTGAGTTCTCTCCTGGATCACTTGCTTaGAAACTATTTCTCTACAATGGAACACTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: LFLCEFSPGSLA*KLFLYNGTLLA
Trigger: TGCTAAGAGTGTTCCATTGTAGAGAAATAGTTTCAAAGCAAGTGATCCAGGAGAGAACTCACACAAGAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR TCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATAAACCACATCAAGCTTaGTGGGAGGTAATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: NISVNPHNGARVMETHVDKPHQA*WEVIKA
Trigger: TGCTTTAATTACCTCCCATCAAGCTTGATGTGGTTT...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCCTATAGAAAAGCTCTaGTCAAAAGGTATCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISPIEKL*SKGISS
Trigger: TGAAGAGATACCTTTTGAGCAGAGCTTTTCTATAGG...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR GCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCAAAATTCGTCCCAAGTaGCATGTGAGATCAACTATA +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISKIRPK*HVRSTI
Trigger: TATAGTTGATCTCACATGGCACTTGGGACGAATTTT...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCATTAATCTGGGTTTCTaGACCAACTATGATTCCTAC +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISINLGF*TNYDSY
Trigger: GTAGGAATCATAGTTGGTGCAGAAACCCAGATTAAT...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCATTAATCTGGGTTTCTaGACCAACTATGATTCCTAC +
Preference number: 4 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFINLGF*TNYDSY
Trigger: GTAGGAATCATAGTTGGTGCAGAAACCCAGATTAAT...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCTCTCCTGGATCACTTaGTTTGAAACTATTTCTCTA +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISLSWIT*FETISL
Trigger: TAGAGAAATAGTTTCAAAGCAAGTGATCCAGGAGAG...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCAGGAATAGAAGAGGTTaGACCACTACAAATTCTACA +
Preference number: 4 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCRNRRG*TTTNST
Trigger: TGTAGAATTTGTAGTGGTGCAACCTCTTCTATTCCT...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCAGGAATAGAAGAGGTTaGACCACTACAAATTCTACA +
Preference number: 4 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFRNRRG*TTTNST
Trigger: TGTAGAATTTGTAGTGGTGCAACCTCTTCTATTCCT...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCAGGAATAGAAGAGGTTaGACCACTACAAATTCTACA +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISRNRRG*TTTNST
Trigger: TGTAGAATTTGTAGTGGTGCAACCTCTTCTATTCCT...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGACCACAATGGAATTATTaGAGAAACTACCAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGPQWNY*RNYQKD
Trigger: ATCTTTCTGGTAGTTTCTGCAATAATTCCATTGTGG...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTCCACAATGGAATTATTaGAGAAACTACCAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPPQWNY*RNYQKD
Trigger: ATCTTTCTGGTAGTTTCTGCAATAATTCCATTGTGG...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATTCTGACATTGCGTTCTaGAAACTAAACCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: NISVNPHNGARVMETHVDSDIAF*KLNQWI
Trigger: AATCCACTGGTTTAGTTTCCAGAACGCAATGTCAGA...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACATAAAGTTCTACTTCTaGCTGTCGGCTACACATAAA +
Preference number: 4 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNIKFYF*LSATHK
Trigger: TTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTAT...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGATAAAGTTCTACTTCTaGCTGTCGGCTACACATAAA +
Preference number: 4 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKIKFYF*LSATHK
Trigger: TTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTAT...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CCA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATATTCCTTTATTAATCTaGGTTTCTGCACCAACTATG +
Preference number: 4 (lower is better)
Translates to: VFECIKFYFWLSATHKGYIPLLI*VSAPTM
Trigger: CATAGTTGGTGCAGAAACCCAGATTAATAAAGGAAT...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCGAATCAGGAAACTTTTaGTTTGAGAAGTGCCAACAT +
Preference number: 4 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCESGNF*FEKCQH
Trigger: ATGTTGGCACTTCTCAAACCAAAAGTTTCCTGATTC...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp ACAAGGGACGTAATTCATGTTGCTCCCAGACACATTAGAGATTATCACAACAAAGAATCAGGAAACTTTTaGTTTGAGAAGTGCCAACAT +
Preference number: 4 (lower is better)
Translates to: TRDVIHVAPRHIRDYHNKESGNF*FEKCQH
Trigger: ATGTTGGCACTTCTCAAACCAAAAGTTTCCTGATTC...TTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAACATGAATTACGTCCCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATATACCAAAGCCAAACCTaGGCAAGATATAAAATTACA +
Preference number: 4 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIYQSQT*ARYKIT
Trigger: TGTAATTTTATATCTTGCCCAGGTTTGGCTTTGGTA...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCACCTATAGAAAAGCTCTaGTCAAAAGGTATCTCTTCA +
Preference number: 4 (lower is better)
Translates to: THKANRILKISDSLKIKAPIEKL*SKGISS
Trigger: TGAAGAGATACCTTTTGAGCAGAGCTTTTCTATAGG...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCACTCTCCTGGATCACTTaGTTTGAAACTATTTCTCTA +
Preference number: 4 (lower is better)
Translates to: THKANRILKISDSLKIKALSWIT*FETISL
Trigger: TAGAGAAATAGTTTCAAAGCAAGTGATCCAGGAGAG...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCAAACTTGTAGTTAGATaGTGTCCTACAAAACACACT +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISKLVVR*CPTKHT
Trigger: AGTGTGTTTTGTAGGACAGCATCTAACTACAAGTTT...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACAAGGGACGTAATTCATGTTGCTCCCAGACACATTAGAGATTATCACAACAAAAAACTTGTAGTTAGATaGTGTCCTACAAAACACACT +
Preference number: 4 (lower is better)
Translates to: TRDVIHVAPRHIRDYHNKKLVVR*CPTKHT
Trigger: AGTGTGTTTTGTAGGACAGCATCTAACTACAAGTTT...TTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAACATGAATTACGTCCCTTGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGCCACAATGGAATTATTaGAGAAACTACCAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKPQWNY*RNYQKD
Trigger: ATCTTTCTGGTAGTTTCTGCAATAATTCCATTGTGG...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp TGCAAGACTACCTTTCCTACCCACTTCAATGCCTTTCTTCTTGATATTATGTTAATGAATGTGCTTTCTTaGATGAGTAGTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: CKTTFPTHFNAFLLDIMLMNVLS*MSSCSA
Trigger: AGCTGAACAACTACTCATGCAAGAAAGCACATTCAT...TAACATAATATCAAGAAGAAAGGCATTGAAGTGGGTAGGAAAGGTAGTCTTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600175.5
ENST00000601768.1
CDS-3UTR CCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCTGGAAACTAAACCAGTaGATTAATGGAAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISWKLNQ*INGKAN
Trigger: GTTTGCTTTTCCATTAATCCACTGGTTTAGTTTCCA...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CCA 90 bp ACAAGGGACGTAATTCATGTTGCTCCCAGACACATTAGAGATTATCACAACAAATGGAAACTAAACCAGTaGATTAATGGAAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: TRDVIHVAPRHIRDYHNKWKLNQ*INGKAN
Trigger: GTTTGCTTTTCCATTAATCCACTGGTTTAGTTTCCA...TTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAACATGAATTACGTCCCTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACATTCCTTTATTAATCTaGGTTTCTGCACCAACTATG +
Preference number: 4 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNIPLLI*VSAPTM
Trigger: CATAGTTGGTGCAGAAACCCAGATTAATAAAGGAAT...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCTACCAAAGCCAAACCTaGGCAAGATATAAAATTACA +
Preference number: 4 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISYQSQT*ARYKIT
Trigger: TGTAATTTTATATCTTGCCCAGGTTTGGCTTTGGTA...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR GCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCAAAACTTGTAGTTAGATaGTGTCCTACAAAACACACT +
Preference number: 4 (lower is better)
Translates to: THKANRILKISDSLKIKAKLVVR*CPTKHT
Trigger: AGTGTGTTTTGTAGGACAGCATCTAACTACAAGTTT...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCATGGAAACTAAACCAGTaGATTAATGGAAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: THKANRILKISDSLKIKAWKLNQ*INGKAN
Trigger: GTTTGCTTTTCCATTAATCCACTGGTTTAGTTTCCA...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CCA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATATTCCTTTATTAATCTaGGTTTCTGCACCAACTATG +
Preference number: 4 (lower is better)
Translates to: NISVNPHNGARVMETHVDIPLLI*VSAPTM
Trigger: CATAGTTGGTGCAGAAACCCAGATTAATAAAGGAAT...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS GCA 90 bp AGCCGCCGCCATCAGGCCTGTGGACTACGGAAGGGTGGCGACAAGTaGAGGAACCTGGGATCAGCTGTCCAGGGCCCAGCCCAGCGGCTA +
Preference number: 5 (lower is better)
Translates to: SRRHQACGLRKGGDK*RNLGSAVQGPAQRL
Trigger: TAGCCGCTGGGCTGGGCCCTGGACAGCTGATCCCAGGTTCCTGCACTTGTCGCCACCCTTCCGTAGTCCACAGGCCTGATGGCGGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
ENST00000450712.2
ENST00000600175.5
ENST00000601768.1
ENST00000610548.2
ENST00000615214.3
CDS-3UTR CAA 90 bp CCTCTAAGTATTTTGCACAGGCTGGTTCCTGTGCCTGGAACAACCTTCCAACCTATGCTGGAGAGCGTATaGGGTGGGGGTGGGATCGGT +
Preference number: 5 (lower is better)
Translates to: PLSILHRLVPVPGTTFQPMLESV*GGGGIG
Trigger: ACCGATCCCACCCCCACCCAATACGCTCTCCAGCAT...AGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATACTTAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR CAA 90 bp GCCTGGGCAGCACCAGGTTCCAATGCAGTCCCACACTCACTTCGTGCTCTCTTCTTCCTTTCACGGGGGTaGAAAGGAATTTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: AWAAPGSNAVPHSLRALFFLSRG*KGICFW
Trigger: CCAGAAGCAAATTCCTTTCAACCCCCGTGAAAGGAA...GAAGAGAGCACGAAGTGAGTGTGGGACTGCATTGGAACCTGGTGCTGCCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS CCA 90 bp AGCAGGAGAGTGTTCTATATAACACCACAATGCTGGAGAGCGTATTaGGTGGGGGTGGGATCGGTGAGAGCATGGACATTCTCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: SRRVFYITPQCWRAY*VGVGSVRAWTFSPH
Trigger: GTGAGGGGAGAATGTCCATGCTCTCACCGATCCCACCCCCACCCAATACGCTCTCCAGCATTGTGGTGTTATATAGAACACTCTCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS GCA 90 bp AAGAGATCGGAGAGTAGCAGGAGAGTGTTCTATATAACACCACAATaGTGGAGAGCGTATTGGGTGGGGGTGGGATCGGTGAGAGCATGG +
Preference number: 5 (lower is better)
Translates to: KRSESSRRVFYITPQ*WRAYWVGVGSVRAW
Trigger: CCATGCTCTCACCGATCCCACCCCCACCCAATACGCTCTCCAGCATTGTGGTGTTATATAGAACACTCTCCTGCTACTCTCCGATCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS CCA 90 bp AGATCGGAGAGTAGCAGGAGAGTGTTCTATATAACACCACAATGCTaGAGAGCGTATTGGGTGGGGGTGGGATCGGTGAGAGCATGGACA +
Preference number: 5 (lower is better)
Translates to: RSESSRRVFYITPQC*RAYWVGVGSVRAWT
Trigger: TGTCCATGCTCTCACCGATCCCACCCCCACCCAATACGCTCTCCAGCATTGTGGTGTTATATAGAACACTCTCCTGCTACTCTCCGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR CAA 90 bp ACACAGATTTTTCTCTGCATGTTGGTCTGCCAAGGGATGGGAAAGGGGTGGTTTGGGGTTGAAAGGAATTaGCTTCTGGCCCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: TQIFLCMLVCQGMGKGWFGVERN*LLAPGW
Trigger: CCAGCCTGGGGCCAGAAGCAAATTCCTTTCAACCCC...AAACCACCCCTTTCCCATCCCTTGGCAGACCAACATGCAGAGAAAAATCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS-3UTR CAA 90 bp GCTGGTTCCTGTGCCTGGAACAACCTTCCAACCTTATTCCAATGGTTGGCAGAAGCCCCTCTAAGTATTTaGCACAGGCTGGTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: AGSCAWNNLPTLFQWLAEAPLSI*HRLVPV
Trigger: CACAGGAACCAGCCTGTGCAAAATACTTAGAGGGGC...TTCTGCCAACCATTGGAATAAGGTTGGAAGGTTGTTCCAGGCACAGGAACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS-3UTR CAA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCATCCTCACACTTGGTGTaGCTGTGTGGCTTCCACTCA +
Preference number: 5 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSSSHLV*LCGFHS
Trigger: TGAGTGGAAGCCACACAGCAACACCAAGTGTGAGGA...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CAA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCGGTGCTCGAAAATGCTaGAGCTGGCTAGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGGARKC*SWLGSP
Trigger: AGGACTTCCTAGCCAGCTCAAGCATTTTCGAGCACC...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCTCCTCACACTTGGTGTaGCTGTGTGGCTTCCACTCA +
Preference number: 5 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGSSHLV*LCGFHS
Trigger: TGAGTGGAAGCCACACAGCAACACCAAGTGTGAGGA...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp TGCCCCTCTAAGTATTTTGCACAGGCTGGTTCCTGTGCCTGGAACAACCTTCCAACCTTATTCCAATGGTaGGCAGAAATGGAAACCCCT +
Preference number: 5 (lower is better)
Translates to: CPSKYFAQAGSCAWNNLPTLFQW*AEMETP
Trigger: AGGGGTTTCCATTTCTGCCAACCATTGGAATAAGGT...TGGAAGGTTGTTCCAGGCACAGGAACCAGCCTGTGCAAAATACTTAGAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS GCA 90 bp TCCGATCACTCATCTAGTTTTCTGGTTCTTATGAATGTGCTTTCTTaGATGAGTAGTTGTTCAGCTCGTGTTCCTGTGCCGGGCCCATCG +
Preference number: 5 (lower is better)
Translates to: SDHSSSFLVLMNVLS*MSSCSARVPVPGPS
Trigger: CGATGGGCCCGGCACAGGAACACGAGCTGAACAACTACTCATGCAAGAAAGCACATTCATAAGAACCAGAAAACTAGATGAGTGATCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601768.1
CDS-3UTR CAA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCCTAACAGGCACTGCCTaGACGAAATTCCAGCAAGAG +
Preference number: 5 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGLTGTA*TKFQQE
Trigger: CTCTTGCTGGAATTTCGTCAAGGCAGTGCCTGTTAG...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCACAAAAGACATCTCCATaGATTGCACAGCACAGTTGT +
Preference number: 5 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSQKTSP*IAQHSC
Trigger: ACAACTGTGCTGTGCAATCAATGGAGATGTCTTTTG...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CAA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATAGGTGCTCGAAAATGCTaGAGCTGGCTAGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: TSEIQIVGALTKAVLPFIGARKC*SWLGSP
Trigger: AGGACTTCCTAGCCAGCTCAAGCATTTTCGAGCACC...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATGGTGCTCGAAAATGCTaGAGCTGGCTAGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: VFECIKFYFWLSATHKGYGARKC*SWLGSP
Trigger: AGGACTTCCTAGCCAGCTCAAGCATTTTCGAGCACC...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CAA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCATTCAGGTCAGGTGTCTaGAAGGCTAGAAAAATTCGT +
Preference number: 5 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSFRSGV*KARKIR
Trigger: ACGAATTTTTCTAGCCTTCAAGACACCTGACCTGAA...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCGCCCAGACAGCTTCCTaGGTGAATTCTACCAAACAT +
Preference number: 5 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFAQTAS*VNSTKH
Trigger: ATGTTTGGTAGAATTCACCAAGGAAGCTGTCTGGGC...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGTAGAAGGACCTCCCTaGGGAATCCTGATCTGTGAC +
Preference number: 5 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKVEGPP*GILICD
Trigger: GTCACAGATCAGGATTCCCAAGGGAGGTCCTTCTAC...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CAA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCGTAGAAGGACCTCCCTaGGGAATCCTGATCTGTGAC +
Preference number: 5 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISVEGPP*GILICD
Trigger: GTCACAGATCAGGATTCCCAAGGGAGGTCCTTCTAC...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CAA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCGTAGAAGGACCTCCCTaGGGAATCCTGATCTGTGAC +
Preference number: 5 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCVEGPP*GILICD
Trigger: GTCACAGATCAGGATTCCCAAGGGAGGTCCTTCTAC...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCGGTGCTCGAAAATGCTaGAGCTGGCTAGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFGARKC*SWLGSP
Trigger: AGGACTTCCTAGCCAGCTCAAGCATTTTCGAGCACC...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp ATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCCATCCTAAGGCCTTCCTCACACTTGGTGTaGCTGTGTGGCTTCCACTCA +
Preference number: 5 (lower is better)
Translates to: MSVIMLNKETELSPILRPSSHLV*LCGFHS
Trigger: TGAGTGGAAGCCACACAGCAACACCAAGTGTGAGGA...AGGCCTTAGGATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425074.3
CDS-3UTR CAA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACTCCTCACACTTGGTGTaGCTGTGTGGCTTCCACTCA +
Preference number: 5 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNSSHLV*LCGFHS
Trigger: TGAGTGGAAGCCACACAGCAACACCAAGTGTGAGGA...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCATCCCTATTTTCACCTTaGTGTAGTTCTCTTCCACTT +
Preference number: 5 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSSLFSP*CSSLPL
Trigger: AAGTGGAAGAGAACTACACAAAGGTGAAAATAGGGA...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGATTGCACAGCACAGTaGTTCAGAAGAAAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKDCTAQ*FRRKGL
Trigger: CAGGCCCTTTCTTCTGAACAACTGTGCTGTGCAATC...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS-3UTR CAA 90 bp TTCTGGCTGTCGGCTACACATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCACCTGGATCACTTGCTTaGAAACTATTTCTCTACAAT +
Preference number: 5 (lower is better)
Translates to: FWLSATHKGYAWSFSLMSPGSLA*KLFLYN
Trigger: ATTGTAGAGAAATAGTTTCAAAGCAAGTGATCCAGG...TGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAGCCGACAGCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCAGATGTACATATAACTaGTACAGCCCTCTATCTACC +
Preference number: 5 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGRCTYN*YSPLST
Trigger: GGTAGATAGAGGGCTGTACAAGTTATATGTACATCT...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATGATTGCACAGCACAGTaGTTCAGAAGAAAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: NISVNPHNGARVMETHVDDCTAQ*FRRKGL
Trigger: CAGGCCCTTTCTTCTGAACAACTGTGCTGTGCAATC...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATCTAACAGGCACTGCCTaGACGAAATTCCAGCAAGAG +
Preference number: 5 (lower is better)
Translates to: NISVNPHNGARVMETHVDLTGTA*TKFQQE
Trigger: CTCTTGCTGGAATTTCGTCAAGGCAGTGCCTGTTAG...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACGCCCAGACAGCTTCCTaGGTGAATTCTACCAAACAT +
Preference number: 5 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNAQTAS*VNSTKH
Trigger: ATGTTTGGTAGAATTCACCAAGGAAGCTGTCTGGGC...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp AGAAACTTTCCTACAAAACAAACTCCAGGCCCAGACAGCTTCCTTGGTGAATTCAGATGTACATATAACTaGTACAGCCCTCTATCTACC +
Preference number: 5 (lower is better)
Translates to: RNFPTKQTPGPDSFLGEFRCTYN*YSPLST
Trigger: GGTAGATAGAGGGCTGTACAAGTTATATGTACATCT...GAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp CCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCTGGGCACCACAATGGAATTATaGCAGAAACTACCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: PNLLYKAGIMLIPKPNLGTTMEL*QKLPER
Trigger: TCTTTCTGGTAGTTTCTGCAATAATTCCATTGTGGT...GCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp TCAAGTGAACATGTAACTCATACCAAGATAGCCCATATTCTGGGCCACAAAGCACATATTCCCTATAGTTaGCTGCAGTTTTCTCATTCC +
Preference number: 5 (lower is better)
Translates to: SSEHVTHTKIAHILGHKAHIPYS*LQFSHS
Trigger: GGAATGAGAAAACTGCAGCAAACTATAGGGAATATG...TGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp ACTTCAGAGATACAGATAGTTGGAGCTCTCACAAAAGCTGTTCTTCCCTTCATAACAGATACTGTGGCTTaGTTCTTGTGTGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: TSEIQIVGALTKAVLPFITDTVA*FLCEFS
Trigger: AGAGAACTCACACAAGAACAAAGCCACAGTATCTGT...TATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATGCCCAGACAGCTTCCTaGGTGAATTCTACCAAACAT +
Preference number: 5 (lower is better)
Translates to: NISVNPHNGARVMETHVDAQTAS*VNSTKH
Trigger: ATGTTTGGTAGAATTCACCAAGGAAGCTGTCTGGGC...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp CACTTTCAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCCAAAAGACATCTCCATaGATTGCACAGCACAGTTGT +
Preference number: 5 (lower is better)
Translates to: HFQFKVMTDTVALFLCEFQKTSP*IAQHSC
Trigger: ACAACTGTGCTGTGCAATCAATGGAGATGTCTTTTG...GAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp ATACTTCCCAACTTACTCTATAAAGCTGGCATTATGCTGATACCAAAGCCAAACCAAAAGACATCTCCATaGATTGCACAGCACAGTTGT +
Preference number: 5 (lower is better)
Translates to: ILPNLLYKAGIMLIPKPNQKTSP*IAQHSC
Trigger: ACAACTGTGCTGTGCAATCAATGGAGATGTCTTTTG...GTTTGGCTTTGGTATCAGCATAATGCCAGCTTTATAGAGTAAGTTGGGAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGACAGAGGTCTGTCTTTaGAAACACATTGGGGTTACT +
Preference number: 5 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKTEVCL*KHIGVT
Trigger: AGTAACCCCAATGTGTTTCAAAAGACAGACCTCTGT...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCACAGAGGTCTGTCTTTaGAAACACATTGGGGTTACT +
Preference number: 5 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISTEVCL*KHIGVT
Trigger: AGTAACCCCAATGTGTTTCAAAAGACAGACCTCTGT...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp CAGTTTAAGGTAATGACAGATACTGTGGCTTTGTTCTTGTGTGAGTTCTCTCCTCATATTCCCTATAGTTaGCTGCAGTTTTCTCATTCC +
Preference number: 5 (lower is better)
Translates to: QFKVMTDTVALFLCEFSPHIPYS*LQFSHS
Trigger: GGAATGAGAAAACTGCAGCAAACTATAGGGAATATG...AGGAGAGAACTCACACAAGAACAAAGCCACAGTATCTGTCATTACCTTAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGACAGGAAACTTTTGGTTaGAGAAGTGCCAACATGTAT +
Preference number: 5 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGQETFG*RSANMY
Trigger: ATACATGTTGGCACTTCTCAAACCAAAAGTTTCCTG...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp GAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGAATTATCTCCACAGATACTGTGGCTTaGTTCTTGTGTGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: ELLSDVSYYVEQGNGIISTDTVA*FLCEFS
Trigger: AGAGAACTCACACAAGAACAAAGCCACAGTATCTGT...GGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp CTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGGAAACGGATCCCTATTTTCACCTTaGTGTAGTTCTCTTCCACTT +
Preference number: 5 (lower is better)
Translates to: LCLELLSDVSYYVEQGNGSLFSP*CSSLPL
Trigger: AAGTGGAAGAGAACTACACAAAGGTGAAAATAGGGA...TCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCAACAGAGGTCTGTCTTTaGAAACACATTGGGGTTACT +
Preference number: 5 (lower is better)
Translates to: THKANRILKISDSLKIKATEVCL*KHIGVT
Trigger: AGTAACCCCAATGTGTTTCAAAAGACAGACCTCTGT...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp AATATTTCTGTAAACCCTCATAATGGAGCCAGAGTAATGGAAACACATGTGGATTTCAGGTCAGGTGTCTaGAAGGCTAGAAAAATTCGT +
Preference number: 5 (lower is better)
Translates to: NISVNPHNGARVMETHVDFRSGV*KARKIR
Trigger: ACGAATTTTTCTAGCCTTCAAGACACCTGACCTGAA...ATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGCATATTCCCTATAGTTaGCTGCAGTTTTCTCATTCC +
Preference number: 5 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKHIPYS*LQFSHS
Trigger: GGAATGAGAAAACTGCAGCAAACTATAGGGAATATG...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp ACAAGGGACGTAATTCATGTTGCTCCCAGACACATTAGAGATTATCACAACAAACAGGAAACTTTTGGTTaGAGAAGTGCCAACATGTAT +
Preference number: 5 (lower is better)
Translates to: TRDVIHVAPRHIRDYHNKQETFG*RSANMY
Trigger: ATACATGTTGGCACTTCTCAAACCAAAAGTTTCCTG...TTTGTTGTGATAATCTCTAATGTGTCTGGGAGCAACATGAATTACGTCCCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp AATGGAAACACATGTGGATGTACCTTTAGAAGGGTCATATTCCCTATAGTTTGCAGATGTACATATAACTaGTACAGCCCTCTATCTACC +
Preference number: 5 (lower is better)
Translates to: NGNTCGCTFRRVIFPIVCRCTYN*YSPLST
Trigger: GGTAGATAGAGGGCTGTACAAGTTATATGTACATCT...GCAAACTATAGGGAATATGACCCTTCTAAAGGTACATCCACATGTGTTTCCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp GTGTTTGAGTGTATAAAGTTCTACTTCTGGCTGTCGGCTACACATAAAGGCTATACCACAATGGAATTATaGCAGAAACTACCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: VFECIKFYFWLSATHKGYTTMEL*QKLPER
Trigger: TCTTTCTGGTAGTTTCTGCAATAATTCCATTGTGGT...ATAGCCTTTATGTGTAGCCGACAGCCAGAAGTAGAACTTTATACACTCAAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCACAGGAAACTTTTGGTTaGAGAAGTGCCAACATGTAT +
Preference number: 5 (lower is better)
Translates to: THKANRILKISDSLKIKAQETFG*RSANMY
Trigger: ATACATGTTGGCACTTCTCAAACCAAAAGTTTCCTG...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCATCCCTATTTTCACCTTaGTGTAGTTCTCTTCCACTT +
Preference number: 5 (lower is better)
Translates to: THKANRILKISDSLKIKASLFSP*CSSLPL
Trigger: AAGTGGAAGAGAACTACACAAAGGTGAAAATAGGGA...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp CATAAAGGCTATGCTTGGAGCTTCTCTCTGATGTCAGTTATTATGTTGAACAAGACCACAATGGAATTATaGCAGAAACTACCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: HKGYAWSFSLMSVIMLNKTTMEL*QKLPER
Trigger: TCTTTCTGGTAGTTTCTGCAATAATTCCATTGTGGT...CTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS-3UTR CAA 90 bp ACCCACAAAGCGAACAGAATCCTCAAGATTTCAGATAGTCTAAAAATTAAGGCACCTGGATCACTTGCTTaGAAACTATTTCTCTACAAT +
Preference number: 5 (lower is better)
Translates to: THKANRILKISDSLKIKAPGSLA*KLFLYN
Trigger: ATTGTAGAGAAATAGTTTCAAAGCAAGTGATCCAGG...TGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000427512.6
CDS GCA 72 bp CATCAGGCCTGTGGACTACGGAAGGGTGGCGACAAGTaGAGGAACCTGGGATCAGCTGTCCAGGGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: HQACGLRKGGDK*RNLGSAVQGPA
Trigger: GGCTGGGCCCTGGACAGCTGATCCCAGGTTCCTGCACTTGTCGCCACCCTTCCGTAGTCCACAGGCCTGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
ENST00000450712.2
ENST00000600175.5
ENST00000601768.1
ENST00000610548.2
ENST00000615214.3
CDS TCA 72 bp GTTCACCTGCCCCTGTATAGGGTCCACAATTACTTCTaGGTTCATGGGAACCTGTGCCGGGCCCATCGGCTC +
Preference number: 6 (lower is better)
Translates to: VHLPLYRVHNYF*VHGNLCRAHRL
Trigger: GAGCCGATGGGCCCGGCACAGGTTCCCATGAACTCAGAAGTAATTGTGGACCCTATACAGGGGCAGGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000610548.2
CDS TCA 72 bp AATGCTGGAGAGCGTATTGGGTGGGGGTGGGATCGGTaGGAGCATGGACATTCTCCCCTCACCTGTATAGGG +
Preference number: 6 (lower is better)
Translates to: NAGERIGWGWDR*EHGHSPLTCIG
Trigger: CCCTATACAGGTGAGGGGAGAATGTCCATGCTCTCACCGATCCCACCCCCACCCAATACGCTCTCCAGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS TCA 72 bp CAGCTCGTGTTCCTGTATAGGGTCCACAATTACTTCTaGGTTCATGGGAACCTGTGCCGGGCCCATCGGCTC +
Preference number: 6 (lower is better)
Translates to: QLVFLYRVHNYF*VHGNLCRAHRL
Trigger: GAGCCGATGGGCCCGGCACAGGTTCCCATGAACTCAGAAGTAATTGTGGACCCTATACAGGAACACGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600175.5
CDS TCA 72 bp CATGCCAACAACCTGTATAGGGTCCACAATTACTTCTaGGTTCATGGGAACCTGTGCCGGGCCCATCGGCTC +
Preference number: 6 (lower is better)
Translates to: HANNLYRVHNYF*VHGNLCRAHRL
Trigger: GAGCCGATGGGCCCGGCACAGGTTCCCATGAACTCAGAAGTAATTGTGGACCCTATACAGGTTGTTGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425074.3
CDS GCA 72 bp GAGAGTAGCAGGAGAGTGTTCTATATAACACCACAATaGTGGAGAGCGTATTGGGTGGGGGTGGGATCGGTG +
Preference number: 6 (lower is better)
Translates to: ESSRRVFYITPQ*WRAYWVGVGSV
Trigger: CACCGATCCCACCCCCACCCAATACGCTCTCCAGCATTGTGGTGTTATATAGAACACTCTCCTGCTACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS CCA 72 bp CAGGGCTCACTACCCATCACCAGTGAGGCAACTATGTaGGACATGAAAGATGTATGTCCCAGAGAGGCCATA +
Preference number: 6 (lower is better)
Translates to: QGSLPITSEATM*DMKDVCPREAI
Trigger: TATGGCCTCTCTGGGACATACATCTTTCATGTCCCACATAGTTGCCTCACTGGTGATGGGTAGTGAGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343280.8
ENST00000610548.2
ENST00000615214.3
CDS CCA 72 bp GTGTTCTATATAACACCACAATGCTGGAGAGCGTATTaGGTGGGGGTGGGATCGGTGAGAGCATGGACATTC +
Preference number: 6 (lower is better)
Translates to: VFYITPQCWRAY*VGVGSVRAWTF
Trigger: GAATGTCCATGCTCTCACCGATCCCACCCCCACCCAATACGCTCTCCAGCATTGTGGTGTTATATAGAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS CCA 72 bp AGTAGCAGGAGAGTGTTCTATATAACACCACAATGCTaGAGAGCGTATTGGGTGGGGGTGGGATCGGTGAGA +
Preference number: 6 (lower is better)
Translates to: SSRRVFYITPQC*RAYWVGVGSVR
Trigger: TCTCACCGATCCCACCCCCACCCAATACGCTCTCCAGCATTGTGGTGTTATATAGAACACTCTCCTGCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS CAA 72 bp AGTGTTCTATATAACACCACAATGCTGGAGAGCGTATaGGGTGGGGGTGGGATCGGTGAGAGCATGGACATT +
Preference number: 6 (lower is better)
Translates to: SVLYNTTMLESV*GGGGIGESMDI
Trigger: AATGTCCATGCTCTCACCGATCCCACCCCCACCCAATACGCTCTCCAGCATTGTGGTGTTATATAGAACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450712.2
CDS TCA 72 bp CTGAGTAGAAGGACCTCCCTTGGGAATCCTGATCTGTaGCATTCCTATAGAAAAGCTCTGCTCAAAAGGTAT +
Preference number: 6 (lower is better)
Translates to: LSRRTSLGNPDL*HSYRKALLKRY
Trigger: ATACCTTTTGAGCAGAGCTTTTCTATAGGAATGTCACAGATCAGGATTCCCAAGGGAGGTCCTTCTACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
CDS CCA 72 bp CTCAGGTCTGACATTGCGTTCTGGAAACTAAACCAGTaGATTAATGGAAAAGCAAACAAAATGTCCACCCGA +
Preference number: 6 (lower is better)
Translates to: LRSDIAFWKLNQ*INGKANKMSTR
Trigger: TCGGGTGGACATTTTGTTTGCTTTTCCATTAATCCACTGGTTTAGTTTCCAGAACGCAATGTCAGACCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
ENST00000600175.5
ENST00000610548.2
ENST00000615214.3
CDS CCA 72 bp TCCCTTTTCTGTCACCTCAGGTCTGACATTGCGTTCTaGAAACTAAACCAGTGGATTAATGGAAAAGCAAAC +
Preference number: 6 (lower is better)
Translates to: SLFCHLRSDIAF*KLNQWINGKAN
Trigger: GTTTGCTTTTCCATTAATCCACTGGTTTAGTTTCCAGAACGCAATGTCAGACCTGAGGTGACAGAAAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343280.8
ENST00000356584.8
ENST00000425074.3
ENST00000427512.6
ENST00000600175.5
ENST00000610548.2
ENST00000615214.3