RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF771 (Homo sapiens)

Ensembl gene IDs: ENSG00000179965

Ensembl transcript IDs: ENST00000319296.10, ENST00000434417.1, ENST00000564550.1, ENST00000566625.2

Found 357 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCTCCACGTGGTCGGGAAGCGGGCTGGCAGCGGGGCTCGGGTCCTaGCTCTGTGGGCTGTCCCTGGGTGAGCCTTCTTACCTCATCTGC +
Preference number: 1 (lower is better)
Translates to: SSTWSGSGLAAGLGS*LCGLSLGEPSYLIC
Trigger: GCAGATGAGGTAAGAAGGCTCACCCAGGGACAGCCCACAGAGCCAGGACCCGAGCCCCGCTGCCAGCCCGCTTCCCGACCACGTGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 90 bp CGTAATTGGTCGGAGCTCTGGAGGCGGGGCTTCGAGCGTGGCTCGTaGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCGGCATGTCTG +
Preference number: 1 (lower is better)
Translates to: RNWSELWRRGFERGS*VFREVAVQRWAACL
Trigger: CAGACATGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACGCTCGAAGCCCCGCCTCCAGAGCTCCGACCAATTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 90 bp CCCTGTGACTCGCCACCTCGCGTATTCCCTGGTGTGAGTGGAGCCTaGAGTTCTCGTGTGTGGGGTGGAGGAGCCGTGCTGGGGACCCAT +
Preference number: 1 (lower is better)
Translates to: PCDSPPRVFPGVSGA*SSRVWGGGAVLGTH
Trigger: ATGGGTCCCCAGCACGGCTCCTCCACCCCACACACGAGAACTCCAGGCTCCACTCACACCAGGGAATACGCGAGGTGGCGAGTCACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR TCA 90 bp GAAAGCAGCAACCCTGTGACTCGCCACCTCGCGTATTCCCTGGTGTaGGTGGAGCCTGGAGTTCTCGTGTGTGGGGTGGAGGAGCCGTGC +
Preference number: 1 (lower is better)
Translates to: ESSNPVTRHLAYSLV*VEPGVLVCGVEEPC
Trigger: GCACGGCTCCTCCACCCCACACACGAGAACTCCAGGCTCCACTCACACCAGGGAATACGCGAGGTGGCGAGTCACAGGGTTGCTGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR GCA 90 bp AAATGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTaGCTCCGAGTGGTAACTAGGAACGCCCTTCAGCCTAGCCCTGGG +
Preference number: 1 (lower is better)
Translates to: KWAQRCTPEAREIGW*LRVVTRNALQPSPG
Trigger: CCCAGGGCTAGGCTGAAGGGCGTTCCTAGTTACCACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 90 bp CAATGTACGTTGCGCTGGGGCCTACTGCCTCCCTTAGGACAGGGATaGGGCGACCTCCATCGTTTCAACCACAGGACACAGCGATGGCGG +
Preference number: 1 (lower is better)
Translates to: QCTLRWGLLPPLGQG*GDLHRFNHRTQRWR
Trigger: CCGCCATCGCTGTGTCCTGTGGTTGAAACGATGGAGGTCGCCCCATCCCTGTCCTAAGGGAGGCAGTAGGCCCCAGCGCAACGTACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 90 bp CCAGACCATAAGGGGCCACGTGTTTCAGGGCAATGTACGTTGCGCTaGGGCCTACTGCCTCCCTTAGGACAGGGATGGGGCGACCTCCAT +
Preference number: 1 (lower is better)
Translates to: PDHKGPRVSGQCTLR*GLLPPLGQGWGDLH
Trigger: ATGGAGGTCGCCCCATCCCTGTCCTAAGGGAGGCAGTAGGCCCCAGCGCAACGTACATTGCCCTGAAACACGTGGCCCCTTATGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 90 bp GCAAAATGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTaGTGCCTCCGAGTGGTAACTAGGAACGCCCTTCAGCCTAGCCCT +
Preference number: 1 (lower is better)
Translates to: AKWAQRCTPEAREIG*CLRVVTRNALQPSP
Trigger: AGGGCTAGGCTGAAGGGCGTTCCTAGTTACCACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCATTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 90 bp CAGGGATGGGGCGACCTCCATCGTTTCAACCACAGGACACAGCGATaGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCTTACTCCGCTC +
Preference number: 1 (lower is better)
Translates to: QGWGDLHRFNHRTQR*RGAEVLLPSDLTPL
Trigger: GAGCGGAGTAAGATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCTGTGTCCTGTGGTTGAAACGATGGAGGTCGCCCCATCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR GCA 90 bp CCCTGGGTGAGCCTTCTTACCTCATCTGCAAAATGGGCGCAGCGGTaGACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCCGAGTGGTA +
Preference number: 1 (lower is better)
Translates to: PWVSLLTSSAKWAQR*TPEAREIGWCLRVV
Trigger: TACCACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCATTTTGCAGATGAGGTAAGAAGGCTCACCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 90 bp TATTTCAGCCGCCGCCTCCATGCTGAGTTTGCTGCGGAACGAGACTaGGAACAGTTCCATCAGCCTCGGAATCTCCTCCTGGCCTTGGTT +
Preference number: 1 (lower is better)
Translates to: YFSRRLHAEFAAERD*EQFHQPRNLLLALV
Trigger: AACCAAGGCCAGGAGGAGATTCCGAGGCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGCAAACTCAGCATGGAGGCGGCGGCTGAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR GCA 90 bp ATGGCCAGTGGGAGCCAGGATGGACTCAGGGTGCCCATGAGACCATaGCGTCATTCAGGCTACACTGTTCTGAACTCACGTGACCAAGAT +
Preference number: 1 (lower is better)
Translates to: MASGSQDGLRVPMRP*RHSGYTVLNSRDQD
Trigger: ATCTTGGTCACGTGAGTTCAGAACAGTGTAGCCTGAATGACGGCATGGTCTCATGGGCACCCTGAGTCCATCCTGGCTCCCACTGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR TCA 90 bp TTGGACTTACACTCCTTTGTCCTATTTCAGCCGCCGCCTCCATGCTaGGTTTGCTGCGGAACGAGACTGGGAACAGTTCCATCAGCCTCG +
Preference number: 1 (lower is better)
Translates to: LDLHSFVLFQPPPPC*VCCGTRLGTVPSAS
Trigger: CGAGGCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGCAAACTCAGCATGGAGGCGGCGGCTGAAATAGGACAAAGGAGTGTAAGTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR GCA 90 bp GTTTCAACCACAGGACACAGCGATGGCGGGGAGCTGAAGTCCTACTaGCGTCTGATCTTACTCCGCTCTTCCCCTTCAATCCCATCCAAA +
Preference number: 1 (lower is better)
Translates to: VSTTGHSDGGELKSY*RLILLRSSPSIPSK
Trigger: TTTGGATGGGATTGAAGGGGAAGAGCGGAGTAAGATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCTGTGTCCTGTGGTTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR TCA 90 bp CATGAGACCATGCCGTCATTCAGGCTACACTGTTCTGAACTCACGTaGCCAAGATGTGACAGAGGCTGGATTCCACGTCCCTGGCACACT +
Preference number: 1 (lower is better)
Translates to: HETMPSFRLHCSELT*PRCDRGWIPRPWHT
Trigger: AGTGTGCCAGGGACGTGGAATCCAGCCTCTGTCACATCTTGGTCACGTGAGTTCAGAACAGTGTAGCCTGAATGACGGCATGGTCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR TCA 90 bp AAGATCTCTGCTCCTCCCATGGCCAATAACTCAGTGGTTCTGATTTaGAAGCAGCAACCCTGTGACTCGCCACCTCGCGTATTCCCTGGT +
Preference number: 1 (lower is better)
Translates to: KISAPPMANNSVVLI*KQQPCDSPPRVFPG
Trigger: ACCAGGGAATACGCGAGGTGGCGAGTCACAGGGTTGCTGCTTTCAAATCAGAACCACTGAGTTATTGGCCATGGGAGGAGCAGAGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR GCA 90 bp GATCTGAGGGTCGTGCCTTGCTCACTGGAGCTCTGCCGAATGCAGTaGGTGTCTGATCGTGAACATAGTATATTTATGGGCCCTTTCAGG +
Preference number: 1 (lower is better)
Translates to: DLRVVPCSLELCRMQ*VSDREHSIFMGPFR
Trigger: CCTGAAAGGGCCCATAAATATACTATGTTCACGATCAGACACGCACTGCATTCGGCAGAGCTCCAGTGAGCAAGGCACGACCCTCAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319296.10
3UTR TCA 90 bp GAGGAAGGGTCTGTGGAACTACCTTCTGTAAGAGAAATTGCATTTTaGTGTGCGGCGATTCCAGGTGGAGGAAACTGCAGAAGTAGCAGC +
Preference number: 1 (lower is better)
Translates to: EEGSVELPSVREIAF*CAAIPGGGNCRSSS
Trigger: GCTGCTACTTCTGCAGTTTCCTCCACCTGGAATCGCCGCACATCAAAATGCAATTTCTCTTACAGAAGGTAGTTCCACAGACCCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 90 bp AGAACTTGTCTCATCAGATCTACATTTTTCTGGCCCGTTTTTCCTTaGCACCCTCTTTCAGGTGACTTTGGACAGCCTGAGGGCTTCCTC +
Preference number: 1 (lower is better)
Translates to: RTCLIRSTFFWPVFP*HPLSGDFGQPEGFL
Trigger: GAGGAAGCCCTCAGGCTGTCCAAAGTCACCTGAAAGAGGGTGCCAAGGAAAAACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR TCA 90 bp ATCGTGAACATAGTATATTTATGGGCCCTTTCAGGTCTAAGGTTATaGGGACGTAACCAAGGGCCAAGTGTGCGATCACCTCCAACCAAC +
Preference number: 1 (lower is better)
Translates to: IVNIVYLWALSGLRL*GRNQGPSVRSPPTN
Trigger: GTTGGTTGGAGGTGATCGCACACTTGGCCCTTGGTTACGTCCTCATAACCTTAGACCTGAAAGGGCCCATAAATATACTATGTTCACGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319296.10
3UTR GCA 90 bp CTTCTTAGAGGAAGGGTCTGTGGAACTACCTTCTGTAAGAGAAATTaGATTTTGATGTGCGGCGATTCCAGGTGGAGGAAACTGCAGAAG +
Preference number: 1 (lower is better)
Translates to: LLRGRVCGTTFCKRN*ILMCGDSRWRKLQK
Trigger: CTTCTGCAGTTTCCTCCACCTGGAATCGCCGCACATCAAAATGCAATTTCTCTTACAGAAGGTAGTTCCACAGACCCTTCCTCTAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 90 bp ATTCAAGGTCACATTTTCCAGTCTTGCCCTGGTTTTGAAATCTATTaGTTTATTTCAATACATCAGCCACTGTGGAGAGAACTTGTCTCA +
Preference number: 1 (lower is better)
Translates to: IQGHIFQSCPGFEIY*FISIHQPLWRELVS
Trigger: TGAGACAAGTTCTCTCCACAGTGGCTGATGTATTGAAATAAACCAATAGATTTCAAAACCAGGGCAAGACTGGAAAATGTGACCTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR-3UTR CCA 90 bp CGTGGCTCGTGGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCGGCATGTCTGGGTCGGGAAGCGGGCTaGCAGCGGGGCTCGGGTCCT +
Preference number: 2 (lower is better)
Translates to: RGSWVFREVAVQRWAACLGREAG*QRGSGP
Trigger: AGGACCCGAGCCCCGCTGCCAGCCCGCTTCCCGACC...CAGACATGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR TCA 90 bp GGAGGGTTCCTCCACGTGGTCGGGAAGCGGGCTGGCAGCGGGGCTCGGGTCCTGTGGGCTGTCCCTGGGTaGGCCTTCTTACCTCATCTG +
Preference number: 2 (lower is better)
Translates to: GGFLHVVGKRAGSGARVLWAVPG*AFLPHL
Trigger: CAGATGAGGTAAGAAGGCTCACCCAGGGACAGCCCA...CAGGACCCGAGCCCCGCTGCCAGCCCGCTTCCCGACCACGTGGAGGAACCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR GCA 90 bp GCGCCCATAAACGAAGTGACGCGCCTGCGCTTCCCCCACCCTCTGCCCTTCGTCTCCGTGAAGTCGCGGTaGAGCGGTGGGCGGCATGTC +
Preference number: 2 (lower is better)
Translates to: APINEVTRLRFPHPLPFVSVKSR*SGGRHV
Trigger: GACATGCCGCCCACCGCTGCACCGCGACTTCACGGA...GACGAAGGGCAGAGGGTGGGGGAAGCGCAGGCGCGTCACTTCGTTTATGGGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR GCA 90 bp GCGCTGGGGCCTACTGCCTCCCTTAGGACAGGGATGGGGCGACCTCCATCGTTTCGGGCCCTCTTCCGCTaGCGTTTCGCTTTGGCGCCC +
Preference number: 2 (lower is better)
Translates to: ALGPTASLRTGMGRPPSFRALFR*RFALAP
Trigger: GGGCGCCAAAGCGAAACGGCAGCGGAAGAGGGCCCG...AAACGATGGAGGTCGCCCCATCCCTGTCCTAAGGGAGGCAGTAGGCCCCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CCA 90 bp CTGTCTCCCAGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCGGGCGAGGAGGAGCCTaGGTTAGTGCAGCCAGGTCG +
Preference number: 2 (lower is better)
Translates to: LSPSSRAAGPAVPSISQTGRGGA*VSAARS
Trigger: CGACCTGGCTGCACTAACCCAGGCTCCTCCTCGCCC...GGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACTGGGAGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
3UTR-3UTR CCA 90 bp CGTGGCTCGTGGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCGGCATGTCTGTGGCCCAGCTCGGGGTaGGGAAGTCGCCCCTTTCTC +
Preference number: 2 (lower is better)
Translates to: RGSWVFREVAVQRWAACLWPSSG*GSRPFL
Trigger: GAGAAAGGGGCGACTTCCCCACCCCGAGCTGGGCCA...CAGACATGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR GCA 90 bp TGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCCGAGTGACCAGATACCGCCTCTaGTCTCCAGGCGCCGGGGGT +
Preference number: 2 (lower is better)
Translates to: WAQRCTPEAREIGWCLRVTRYRL*SPGAGG
Trigger: ACCCCCGGCGCCTGGAGAGCAGAGGCGGTATCTGGT...CACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR TCA 90 bp CGTGGCTCGTGGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCGGCATGTCTGGCAGCGGTGCACACCTaGGGCAAGGGAAATTGGGTG +
Preference number: 2 (lower is better)
Translates to: RGSWVFREVAVQRWAACLAAVHT*GKGNWV
Trigger: CACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGC...CAGACATGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CCA 90 bp GCGCTGGGGCCTACTGCCTCCCTTAGGACAGGGATGGGGCGACCTCCATCGTTTTGGGCGGCATGTCTGTaGCCGGTGGGGAGATTCGTG +
Preference number: 2 (lower is better)
Translates to: ALGPTASLRTGMGRPPSFWAACL*PVGRFV
Trigger: CACGAATCTCCCCACCGGCCACAGACATGCCGCCCA...AAACGATGGAGGTCGCCCCATCCCTGTCCTAAGGGAGGCAGTAGGCCCCAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CCA 90 bp CACAGGCCAGACCATAAGGGGCCACGTGTTTCAGGGCAATGTACGTTGCGCTGGGAGGGTTCCTCCACGTaGTCGGGAAGCGGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: HRPDHKGPRVSGQCTLRWEGSST*SGSGLA
Trigger: TGCCAGCCCGCTTCCCGACCACGTGGAGGAACCCTC...CCAGCGCAACGTACATTGCCCTGAAACACGTGGCCCCTTATGGTCTGGCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR TCA 90 bp CAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCCGAGTGGTAACTCTTCCTGGTAGAGTCTaGGTTGTGGGGGAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: QRCTPEAREIGWCLRVVTLPGRV*VVGEGR
Trigger: CCTCCCCTCCCCCACAACTCAGACTCTACCAGGAAG...AGTTACCACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CAA 90 bp GGGCCTAGCGGAAGAATTCCAGGGCCTAAGACTAGAAACGCGCGCTaGAAGCTCCCTCAGATTGGTCCAGTGAGGGAAGGGGAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: GPSGRIPGPKTRNAR*KLPQIGPVREGEGC
Trigger: ACAGCCCTCCCCTTCCCTCACTGGACCAATCTGAGGGAGCTTCAAGCGCGCGTTTCTAGTCTTAGGCCCTGGAATTCTTCCGCTAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR GCA 90 bp GGAGGGTTCCTCCACGTGGTCGGGAAGCGGGCTGGCAGCGGGGCTCGGGTCCTGAAAGAGGAAATGACCTaGACAATACCATCCAATGAA +
Preference number: 2 (lower is better)
Translates to: GGFLHVVGKRAGSGARVLKEEMT*TIPSNE
Trigger: TTCATTGGATGGTATTGTGCAGGTCATTTCCTCTTT...CAGGACCCGAGCCCCGCTGCCAGCCCGCTTCCCGACCACGTGGAGGAACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CCA 90 bp TGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCCGAGTGAGTTGCAGAATCTCCTaGTCCCAGGCCCCATTACAT +
Preference number: 2 (lower is better)
Translates to: WAQRCTPEAREIGWCLRVSCRIS*SQAPLH
Trigger: ATGTAATGGGGCCTGGGACCAGGAGATTCTGCAACT...CACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CCA 90 bp CACAGGCCAGACCATAAGGGGCCACGTGTTTCAGGGCAATGTACGTTGCGCTGGGCTGCGGAACGAGACTaGGAACAGTTCCATCAGCCT +
Preference number: 2 (lower is better)
Translates to: HRPDHKGPRVSGQCTLRWAAERD*EQFHQP
Trigger: AGGCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGC...CCAGCGCAACGTACATTGCCCTGAAACACGTGGCCCCTTATGGTCTGGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CAA 90 bp GCCCCTGCATCACCCTCTAACCCGGAGACTTGGACTTACACTCCTTaGTCCTATTTCAGCCGCCGCCTCCATGCTGAGTTTGCTGCGGAA +
Preference number: 2 (lower is better)
Translates to: APASPSNPETWTYTP*SYFSRRLHAEFAAE
Trigger: TTCCGCAGCAAACTCAGCATGGAGGCGGCGGCTGAAATAGGACAAAGGAGTGTAAGTCCAAGTCTCCGGGTTAGAGGGTGATGCAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR GCA 90 bp TCAACCACAGGACACAGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCTTGCTGTTGTTGGGATaGAGAGAGGACTCACGGGTC +
Preference number: 2 (lower is better)
Translates to: STTGHSDGGELKSYCRLILLLLG*REDSRV
Trigger: GACCCGTGAGTCCTCTCTGCATCCCAACAACAGCAA...GATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCTGTGTCCTGTGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR GCA 90 bp AGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCTTACTCCGCTCTTCCCCAGGTGGAGGAAACTaGAGAAGTAGCAGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: SDGGELKSYCRLILLRSSPGGGN*RSSSRR
Trigger: TCTCCTGCTGCTACTTCTGCAGTTTCCTCCACCTGG...GGAAGAGCGGAGTAAGATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR TCA 90 bp TGTGGGGGTTGGCCTCGAGGTTTCTCAACGTCCTTAAGCCCTGATTTAATACCTCCGCCGCCTCCATGCTaGGTTTGCTGCGGAACGAGA +
Preference number: 2 (lower is better)
Translates to: CGGWPRGFSTSLSPDLIPPPPPC*VCCGTR
Trigger: TCTCGTTCCGCAGCAAACTCAGCATGGAGGCGGCGG...AGGTATTAAATCAGGGCTTAAGGACGTTGAGAAACCTCGAGGCCAACCCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR GCA 90 bp CCTCAGATTGGTCCAGTGAGGGAAGGGGAGGGCTGTAGCAAACTCCACAAAAGTAAATGGGCGCAGCGGTaGACACCTGAGGCAAGGGAA +
Preference number: 2 (lower is better)
Translates to: PQIGPVREGEGCSKLHKSKWAQR*TPEARE
Trigger: TTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCATTT...ACTTTTGTGGAGTTTGCTACAGCCCTCCCCTTCCCTCACTGGACCAATCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CCA 90 bp GCTGTAGCAAACTCCACAAAAGTCATTGGTCTCTTTCCTCAGGCTCCGCCCCGTCTTTCTCCCGCGTTTTaGGGAGGGTTCCTCCACGTG +
Preference number: 2 (lower is better)
Translates to: AVANSTKVIGLFPQAPPRLSPAF*GGFLHV
Trigger: CACGTGGAGGAACCCTCCCCAAAACGCGGGAGAAAG...ACGGGGCGGAGCCTGAGGAAAGAGACCAATGACTTTTGTGGAGTTTGCTACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CAA 90 bp CTTACACTCCTTTGTCCTATTTCAGCCGCCGCCTCCATGCTGAGTTaGCTGCGGAACGAGACTGGGAACAGTTCCATCAGCCTCGGAATC +
Preference number: 2 (lower is better)
Translates to: LTLLCPISAAASMLS*LRNETGNSSISLGI
Trigger: GATTCCGAGGCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGCAAACTCAGCATGGAGGCGGCGGCTGAAATAGGACAAAGGAGTGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CAA 90 bp GTCTCCAGCCCAGGAGAAGGGGCCTTGGATGCCCGAGGAAAAATCTaGGTAAGAGGAGCTGAATCCAGCTCATTAAGATCCTCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: VSSPGEGALDARGKI*VRGAESSSLRSSSA
Trigger: GGCAGAGGAGGATCTTAATGAGCTGGATTCAGCTCCTCTTACCAAGATTTTTCCTCGGGCATCCAAGGCCCCTTCTCCTGGGCTGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR-3UTR TCA 90 bp TCAACCACAGGACACAGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCCGCCCATTTTATAGATaGGGGAACCAAGTTCCGGAA +
Preference number: 2 (lower is better)
Translates to: STTGHSDGGELKSYCRLIRPFYR*GNQVPE
Trigger: TTCCGGAACTTGGTTCCCTCATCTATAAAATGGGCG...GATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCTGTGTCCTGTGGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR GCA 90 bp TCCTCTGCCCCAGTGTCCCGAGAAAGGCCAGGTAGGCTAAGTGAGATCAAATTCCCAGGTGTGGTGGGGTaGACTTGTAGTCCCAACAAC +
Preference number: 2 (lower is better)
Translates to: SSAPVSRERPGRLSEIKFPGVVG*TCSPNN
Trigger: GTTGTTGGGACTACAAGTGCACCCCACCACACCTGG...GAATTTGATCTCACTTAGCCTACCTGGCCTTTCTCGGGACACTGGGGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR-3UTR CCA 90 bp CACCTCACTCACAGGCACGGGTGGGGTGAGGATATAATACTTTATTCACTAACAGGGCGAGGAGGAGCCTaGGTTAGTGCAGCCAGGTCG +
Preference number: 2 (lower is better)
Translates to: HLTHRHGWGEDIILYSLTGRGGA*VSAARS
Trigger: CGACCTGGCTGCACTAACCCAGGCTCCTCCTCGCCC...TGTTAGTGAATAAAGTATTATATCCTCACCCCACCCGTGCCTGTGAGTGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319296.10
3UTR-3UTR CCA 90 bp CTCTGTGGGCTGTCCCTGGGTGAGCCTTCTTACCTCATCTGCAAAATGGGCGCAGCTCTTTGCTGTTGTTaGGATGCAGAGAGGACTCAC +
Preference number: 2 (lower is better)
Translates to: LCGLSLGEPSYLICKMGAALCCC*DAERTH
Trigger: GTGAGTCCTCTCTGCATCCCAACAACAGCAAAGAGC...TGCGCCCATTTTGCAGATGAGGTAAGAAGGCTCACCCAGGGACAGCCCACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CCA 90 bp CTTCAATCCCATCCAAATAGTGTGGGGGTTGGCCTCGAGGTTTCTCAACGTCCTCTCGGAATCTCCTCCTaGCCTTGGTTGGGGAAGTGG +
Preference number: 2 (lower is better)
Translates to: LQSHPNSVGVGLEVSQRPLGISS*PWLGKW
Trigger: CCACTTCCCCAACCAAGGCCAGGAGGAGATTCCGAG...AGGACGTTGAGAAACCTCGAGGCCAACCCCCACACTATTTGGATGGGATTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CAA 90 bp CTCCATACAAGCACTGTTGATGTCTCCAGCCCAGGAGAAGGGGCCTaGGATGCCCGAGGAAAAATCTTGGTAAGAGGAGCTGAATCCAGC +
Preference number: 2 (lower is better)
Translates to: LHTSTVDVSSPGEGA*DARGKILVRGAESS
Trigger: GCTGGATTCAGCTCCTCTTACCAAGATTTTTCCTCGGGCATCCAAGGCCCCTTCTCCTGGGCTGGAGACATCAACAGTGCTTGTATGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR-3UTR TCA 90 bp TCAACCACAGGACACAGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCAGAGAAATTGCATTTTaGTGTGCGGCGATTCCAGGT +
Preference number: 2 (lower is better)
Translates to: STTGHSDGGELKSYCRLIREIAF*CAAIPG
Trigger: ACCTGGAATCGCCGCACATCAAAATGCAATTTCTCT...GATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCTGTGTCCTGTGGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR TCA 90 bp CATGCTGAGTTTGCTGCGGAACGAGACTGGGAACAGTTCCATCAGCCTCGGAATTTCAGTTTCCCCTCCTaGTTGCTAGGCTCTTTGCTG +
Preference number: 2 (lower is better)
Translates to: HAEFAAERDWEQFHQPRNFSFPS*LLGSLL
Trigger: CAGCAAAGAGCCTAGCAATCAGGAGGGGAAACTGAA...ATTCCGAGGCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGCAAACTCAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR GCA 90 bp CTTCAATCCCATCCAAATAGTGTGGGGGTTGGCCTCGAGGTTTCTCAACGTCCTAGGGAAATTGGGTGGTaGCTCCGAGTGGTAACTAGG +
Preference number: 2 (lower is better)
Translates to: LQSHPNSVGVGLEVSQRPREIGW*LRVVTR
Trigger: CCTAGTTACCACTCGGAGGCACCACCCAATTTCCCT...AGGACGTTGAGAAACCTCGAGGCCAACCCCCACACTATTTGGATGGGATTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR TCA 90 bp CATGCTGAGTTTGCTGCGGAACGAGACTGGGAACAGTTCCATCAGCCTCGGAATCTGGCAGAACTCTTGTaGGTAGATGGAAAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: HAEFAAERDWEQFHQPRNLAELL*VDGKLP
Trigger: AGGAAGCTTTCCATCTACTCACAAGAGTTCTGCCAG...ATTCCGAGGCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGCAAACTCAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CCA 90 bp GCTGTAGCAAACTCCACAAAAGTCATTGGTCTCTTTCCTCAGGCTCCGCCCCGTTCTAACCCGGAGACTTaGACTTACACTCCTTTGTCC +
Preference number: 2 (lower is better)
Translates to: AVANSTKVIGLFPQAPPRSNPET*TYTPLS
Trigger: GGACAAAGGAGTGTAAGTCCAAGTCTCCGGGTTAGA...ACGGGGCGGAGCCTGAGGAAAGAGACCAATGACTTTTGTGGAGTTTGCTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CCA 90 bp ACTGTTCTGAACTCACGTGACCAAGATGTGACAGAGGCTGGATTCCACGTCCCTAAAATTAGCCAGGTGTaGTGGGGTGCACTTGTAGTC +
Preference number: 2 (lower is better)
Translates to: TVLNSRDQDVTEAGFHVPKISQV*WGALVV
Trigger: GACTACAAGTGCACCCCACCACACCTGGCTAATTTT...AGGGACGTGGAATCCAGCCTCTGTCACATCTTGGTCACGTGAGTTCAGAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR-3UTR TCA 90 bp TCATTAATTTCTCTAGGGCATATACCTAGAATTGCAATTGTCACAGCCTTGGGATCAGGCTCCGCCCCGTaGGGCAATAGAGAACTCCCG +
Preference number: 2 (lower is better)
Translates to: SLISLGHIPRIAIVTALGSGSAP*GNRELP
Trigger: CGGGAGTTCTCTATTGCCTCACGGGGCGGAGCCTGA...TCCCAAGGCTGTGACAATTGCAATTCTAGGTATATGCCCTAGAGAAATTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR GCA 90 bp CGAATGCAGTGCGTGTCTGATCGTGAACATAGTATATTTATGGGCCCTTTCAGGCAACACAAACCGAGGTaGCGGGAACCCCTTTTAGGT +
Preference number: 2 (lower is better)
Translates to: RMQCVSDREHSIFMGPFRQHKPR*REPLLG
Trigger: ACCTAAAAGGGGTTCCCGGCACCTCGGTTTGTGTTG...CCTGAAAGGGCCCATAAATATACTATGTTCACGATCAGACACGCACTGCATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
3UTR-3UTR GCA 90 bp TGTGGGGGTTGGCCTCGAGGTTTCTCAACGTCCTTAAGCCCTGATTTAATACCTAATTGCATTTTGATGTaGGGCGATTCCAGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: CGGWPRGFSTSLSPDLIPNCILM*GDSRWR
Trigger: CCTCCACCTGGAATCGCCGCACATCAAAATGCAATT...AGGTATTAAATCAGGGCTTAAGGACGTTGAGAAACCTCGAGGCCAACCCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR GCA 90 bp GACACAGGGCCTAGCGGAAGAATTCCAGGGCCTAAGACTAGAAACGCGCGCTTGTTCTGTAAGAGAAATTaGATTTTGATGTGCGGCGAT +
Preference number: 2 (lower is better)
Translates to: DTGPSGRIPGPKTRNARLFCKRN*ILMCGD
Trigger: ATCGCCGCACATCAAAATGCAATTTCTCTTACAGAA...CAAGCGCGCGTTTCTAGTCTTAGGCCCTGGAATTCTTCCGCTAGGCCCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CCA 90 bp TCATTAATTTCTCTAGGGCATATACCTAGAATTGCAATTGTCACAGCCTTGGGAGGGGGTAGCTGCCTCTaGCCCCTGCATCACCCTCTA +
Preference number: 2 (lower is better)
Translates to: SLISLGHIPRIAIVTALGGGSCL*PLHHPL
Trigger: TAGAGGGTGATGCAGGGGCCAGAGGCAGCTACCCCC...TCCCAAGGCTGTGACAATTGCAATTCTAGGTATATGCCCTAGAGAAATTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR TCA 90 bp CTGTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTGGCCCGTTTTTCCTTGGAAGGAGGATCACTTaGGCCCAAGAGTTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: LWRELVSSDLHFSGPFFLGRRIT*AQEFKA
Trigger: AGCCTTGAACTCTTGGGCTCAAGTGATCCTCCTTCC...AAGGAAAAACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR-3UTR CCA 90 bp TCATTAATTTCTCTAGGGCATATACCTAGAATTGCAATTGTCACAGCCTTGGGAGAGAACTCCCGTAATTaGTCGGAGCTCTGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: SLISLGHIPRIAIVTALGENSRN*SELWRR
Trigger: CCGCCTCCAGAGCTCCGACCAATTACGGGAGTTCTC...TCCCAAGGCTGTGACAATTGCAATTCTAGGTATATGCCCTAGAGAAATTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR GCA 90 bp TGTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTGGCCCGTTTTTCCTTGATTAAGATCCTCCTCTaGCCCAGTGTCCCGAGAAAG +
Preference number: 2 (lower is better)
Translates to: CGENLSHQIYIFLARFSLIKILL*PSVPRK
Trigger: CTTTCTCGGGACACTGGGGCAGAGGAGGATCTTAAT...CAAGGAAAAACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR-3UTR CCA 90 bp TCAATACATCAGCCACTGTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTCAGGAGAAGGGGCCTTaGATGCCCGAGGAAAAATCT +
Preference number: 2 (lower is better)
Translates to: SIHQPLWRELVSSDLHFSQEKGP*MPEEKS
Trigger: AGATTTTTCCTCGGGCATCCAAGGCCCCTTCTCCTG...AGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAGTGGCTGATGTATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR-3UTR CCA 90 bp GTGTCTGATCGTGAACATAGTATATTTATGGGCCCTTTCAGGTCTAAGGTTATGACTCACAGGCACGGGTaGGGTGAGGATATAATACTT +
Preference number: 2 (lower is better)
Translates to: VSDREHSIFMGPFRSKVMTHRHG*GEDIIL
Trigger: AAGTATTATATCCTCACCCCACCCGTGCCTGTGAGT...CATAACCTTAGACCTGAAAGGGCCCATAAATATACTATGTTCACGATCAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319296.10
3UTR-3UTR TCA 90 bp TCAATACATCAGCCACTGTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTCTTGGTAAGAGGAGCTaGATCCAGCTCATTAAGATC +
Preference number: 2 (lower is better)
Translates to: SIHQPLWRELVSSDLHFSLGKRS*IQLIKI
Trigger: GATCTTAATGAGCTGGATTCAGCTCCTCTTACCAAG...AGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAGTGGCTGATGTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR CAA 90 bp AAATCTATTGGTTTATTTCAATACATCAGCCACTGTGGAGAGAACTaGTCTCATCAGATCTACATTTTTCTGGCCCGTTTTTCCTTGGCA +
Preference number: 2 (lower is better)
Translates to: KSIGLFQYISHCGEN*SHQIYIFLARFSLA
Trigger: TGCCAAGGAAAAACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAGTGGCTGATGTATTGAAATAAACCAATAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR CCA 72 bp ATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGCCTaGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCC +
Preference number: 3 (lower is better)
Translates to: ISQTRRPGRGGA*VSAARSKPQRA
Trigger: GGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
3UTR CCA 72 bp TTGGGGAGGGTTCCTCCACGTGGTCGGGAAGCGGGCTaGCAGCGGGGCTCGGGTCCTGGCTCTGTGGGCTGT +
Preference number: 3 (lower is better)
Translates to: LGRVPPRGREAG*QRGSGPGSVGC
Trigger: ACAGCCCACAGAGCCAGGACCCGAGCCCCGCTGCCAGCCCGCTTCCCGACCACGTGGAGGAACCCTCCCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp TGGTCGGGAAGCGGGCTGGCAGCGGGGCTCGGGTCCTaGCTCTGTGGGCTGTCCCTGGGTGAGCCTTCTTAC +
Preference number: 3 (lower is better)
Translates to: WSGSGLAAGLGS*LCGLSLGEPSY
Trigger: GTAAGAAGGCTCACCCAGGGACAGCCCACAGAGCCAGGACCCGAGCCCCGCTGCCAGCCCGCTTCCCGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp TCGGAGCTCTGGAGGCGGGGCTTCGAGCGTGGCTCGTaGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCG +
Preference number: 3 (lower is better)
Translates to: SELWRRGFERGS*VFREVAVQRWA
Trigger: CGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACGCTCGAAGCCCCGCCTCCAGAGCTCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR TCA 72 bp GAGGCGGGGCTTCGAGCGTGGCTCGTGGGTTTTCCGTaGAGTCGCGGTGCAGCGGTGGGCGGCATGTCTGTG +
Preference number: 3 (lower is better)
Translates to: EAGLRAWLVGFP*SRGAAVGGMSV
Trigger: CACAGACATGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACGCTCGAAGCCCCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR GCA 72 bp TCGAGCGTGGCTCGTGGGTTTTCCGTGAAGTCGCGGTaGAGCGGTGGGCGGCATGTCTGTGGCCGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: SSVARGFSVKSR*SGGRHVCGRWG
Trigger: TCCCCACCGGCCACAGACATGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACGCTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp GGCTCGTGGGTTTTCCGTGAAGTCGCGGTGCAGCGGTaGGCGGCATGTCTGTGGCCGGTGGGGAGATTCGTG +
Preference number: 3 (lower is better)
Translates to: GSWVFREVAVQR*AACLWPVGRFV
Trigger: CACGAATCTCCCCACCGGCCACAGACATGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp CCACCTGACGGGCCCTCTTCCGCTGCCGTTTCGCTTTaGCGCCCTCTGGCGCCCATAAACGAAGTGACGCGC +
Preference number: 3 (lower is better)
Translates to: PPDGPSSAAVSL*RPLAPINEVTR
Trigger: GCGCGTCACTTCGTTTATGGGCGCCAGAGGGCGCCAAAGCGAAACGGCAGCGGAAGAGGGCCCGTCAGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CAA 90 bp GGAGGGTTCCTCCACGTGGTCGGGAAGCGGGCTGGCAGCGGGGCTCGGGTCCTGCTAGGCTCTTTGCTGTaGTTGGGATGCAGAGAGGAC +
Preference number: 3 (lower is better)
Translates to: GGFLHVVGKRAGSGARVLLGSLL*LGCRED
Trigger: GTCCTCTCTGCATCCCAACAACAGCAAAGAGCCTAG...CAGGACCCGAGCCCCGCTGCCAGCCCGCTTCCCGACCACGTGGAGGAACCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp GCTCCGCCCCGTGAGGCAATAGAGAACTCCCGTAATTaGTCGGAGCTCTGGAGGCGGGGCTTCGAGCGTGGC +
Preference number: 3 (lower is better)
Translates to: APPREAIENSRN*SELWRRGFERG
Trigger: GCCACGCTCGAAGCCCCGCCTCCAGAGCTCCGACCAATTACGGGAGTTCTCTATTGCCTCACGGGGCGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp CAGCGGGGCTCGGGTCCTGGCTCTGTGGGCTGTCCCTaGGTGAGCCTTCTTACCTCATCTGCAAAATGGGCG +
Preference number: 3 (lower is better)
Translates to: QRGSGPGSVGCP*VSLLTSSAKWA
Trigger: CGCCCATTTTGCAGATGAGGTAAGAAGGCTCACCCAGGGACAGCCCACAGAGCCAGGACCCGAGCCCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp TCGCCACCTCGCGTATTCCCTGGTGTGAGTGGAGCCTaGAGTTCTCGTGTGTGGGGTGGAGGAGCCGTGCTG +
Preference number: 3 (lower is better)
Translates to: SPPRVFPGVSGA*SSRVWGGGAVL
Trigger: CAGCACGGCTCCTCCACCCCACACACGAGAACTCCAGGCTCCACTCACACCAGGGAATACGCGAGGTGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CAA 90 bp CACAGGCCAGACCATAAGGGGCCACGTGTTTCAGGGCAATGTACGTTGCGCTGGCGCTGCCGTTTCGCTTaGGCGCCCTCTGGCGCCCAT +
Preference number: 3 (lower is better)
Translates to: HRPDHKGPRVSGQCTLRWRCRFA*APSGAH
Trigger: ATGGGCGCCAGAGGGCGCCAAAGCGAAACGGCAGCG...CCAGCGCAACGTACATTGCCCTGAAACACGTGGCCCCTTATGGTCTGGCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp AAGGGGCCACGTGTTTCAGGGCAATGTACGTTGCGCTaGGGCCTACTGCCTCCCTTAGGACAGGGATGGGGC +
Preference number: 3 (lower is better)
Translates to: KGPRVSGQCTLR*GLLPPLGQGWG
Trigger: GCCCCATCCCTGTCCTAAGGGAGGCAGTAGGCCCCAGCGCAACGTACATTGCCCTGAAACACGTGGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR TCA 72 bp AACCCTGTGACTCGCCACCTCGCGTATTCCCTGGTGTaGGTGGAGCCTGGAGTTCTCGTGTGTGGGGTGGAG +
Preference number: 3 (lower is better)
Translates to: NPVTRHLAYSLV*VEPGVLVCGVE
Trigger: CTCCACCCCACACACGAGAACTCCAGGCTCCACTCACACCAGGGAATACGCGAGGTGGCGAGTCACAGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp GCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTaGTGCCTCCGAGTGGTAACTAGGAACGCCCTTCAG +
Preference number: 3 (lower is better)
Translates to: AQRCTPEAREIG*CLRVVTRNALQ
Trigger: CTGAAGGGCGTTCCTAGTTACCACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp TTGCGCTGGGGCCTACTGCCTCCCTTAGGACAGGGATaGGGCGACCTCCATCGTTTCAACCACAGGACACAG +
Preference number: 3 (lower is better)
Translates to: LRWGLLPPLGQG*GDLHRFNHRTQ
Trigger: CTGTGTCCTGTGGTTGAAACGATGGAGGTCGCCCCATCCCTGTCCTAAGGGAGGCAGTAGGCCCCAGCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CAA 90 bp GCTGCCGTTTCGCTTTGGCGCCCTCTGGCGCCCATAAACGAAGTGACGCGCCTGGGCTCTTTGCTGTTGTaGGGATGCAGAGAGGACTCA +
Preference number: 3 (lower is better)
Translates to: AAVSLWRPLAPINEVTRLGSLLL*GCREDS
Trigger: TGAGTCCTCTCTGCATCCCAACAACAGCAAAGAGCC...CAGGCGCGTCACTTCGTTTATGGGCGCCAGAGGGCGCCAAAGCGAAACGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CAA 90 bp GCGCCCATAAACGAAGTGACGCGCCTGCGCTTCCCCCACCCTCTGCCCTTCGTCCTTCCCCAGGTCGAATaGGTACCTCTACCTTTAGAC +
Preference number: 3 (lower is better)
Translates to: APINEVTRLRFPHPLPFVLPQVE*VPLPLD
Trigger: GTCTAAAGGTAGAGGTACCAATTCGACCTGGGGAAG...GACGAAGGGCAGAGGGTGGGGGAAGCGCAGGCGCGTCACTTCGTTTATGGGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR GCA 72 bp CAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTaGCTCCGAGTGGTAACTAGGAACGCCCTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: QRCTPEAREIGW*LRVVTRNALQP
Trigger: AGGCTGAAGGGCGTTCCTAGTTACCACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp CGCCGCCTCCATGCTGAGTTTGCTGCGGAACGAGACTaGGAACAGTTCCATCAGCCTCGGAATCTCCTCCTG +
Preference number: 3 (lower is better)
Translates to: RRLHAEFAAERD*EQFHQPRNLLL
Trigger: CAGGAGGAGATTCCGAGGCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGCAAACTCAGCATGGAGGCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp GAGGCAATAGAGAACTCCCGTAATTGGTCGGAGCTCTaGAGGCGGGGCTTCGAGCGTGGCTCGTGGGTTTTC +
Preference number: 3 (lower is better)
Translates to: EAIENSRNWSEL*RRGFERGSWVF
Trigger: GAAAACCCACGAGCCACGCTCGAAGCCCCGCCTCCAGAGCTCCGACCAATTACGGGAGTTCTCTATTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CAA 90 bp CGTGGCTCGTGGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCGGCATGTCTGAAGAGAAATTGCATTTaGATGTGCGGCGATTCCAGG +
Preference number: 3 (lower is better)
Translates to: RGSWVFREVAVQRWAACLKRNCI*MCGDSR
Trigger: CCTGGAATCGCCGCACATCAAAATGCAATTTCTCTT...CAGACATGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp GGCGACCTCCATCGTTTCAACCACAGGACACAGCGATaGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCTT +
Preference number: 3 (lower is better)
Translates to: GDLHRFNHRTQR*RGAEVLLPSDL
Trigger: AAGATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCTGTGTCCTGTGGTTGAAACGATGGAGGTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CAA 90 bp GCTGTAGCAAACTCCACAAAAGTCATTGGTCTCTTTCCTCAGGCTCCGCCCCGTGCCTCCATGCTGAGTTaGCTGCGGAACGAGACTGGG +
Preference number: 3 (lower is better)
Translates to: AVANSTKVIGLFPQAPPRASMLS*LRNETG
Trigger: CCCAGTCTCGTTCCGCAGCAAACTCAGCATGGAGGC...ACGGGGCGGAGCCTGAGGAAAGAGACCAATGACTTTTGTGGAGTTTGCTACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CAA 90 bp GCTGCCGTTTCGCTTTGGCGCCCTCTGGCGCCCATAAACGAAGTGACGCGCCTGGGGAGACGTTATTTTTaGCTGGAGGAGGTCAAGAAA +
Preference number: 3 (lower is better)
Translates to: AAVSLWRPLAPINEVTRLGRRYF*LEEVKK
Trigger: TTTCTTGACCTCCTCCAGCAAAAAATAACGTCTCCC...CAGGCGCGTCACTTCGTTTATGGGCGCCAGAGGGCGCCAAAGCGAAACGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR GCA 72 bp ACAGGACACAGCGATGGCGGGGAGCTGAAGTCCTACTaGCGTCTGATCTTACTCCGCTCTTCCCCTTCAATC +
Preference number: 3 (lower is better)
Translates to: TGHSDGGELKSY*RLILLRSSPSI
Trigger: GATTGAAGGGGAAGAGCGGAGTAAGATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCTGTGTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR TCA 72 bp CACTCCTTTGTCCTATTTCAGCCGCCGCCTCCATGCTaGGTTTGCTGCGGAACGAGACTGGGAACAGTTCCA +
Preference number: 3 (lower is better)
Translates to: HSFVLFQPPPPC*VCCGTRLGTVP
Trigger: TGGAACTGTTCCCAGTCTCGTTCCGCAGCAAACTCAGCATGGAGGCGGCGGCTGAAATAGGACAAAGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CAA 90 bp TGTGGGGGTTGGCCTCGAGGTTTCTCAACGTCCTTAAGCCCTGATTTAATACCTCTGAGGCAAGGGAAATaGGGTGGTGCCTCCGAGTGG +
Preference number: 3 (lower is better)
Translates to: CGGWPRGFSTSLSPDLIPLRQGK*GGASEW
Trigger: CCACTCGGAGGCACCACCCAATTTCCCTTGCCTCAG...AGGTATTAAATCAGGGCTTAAGGACGTTGAGAAACCTCGAGGCCAACCCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR TCA 72 bp GCTCCTCCCATGGCCAATAACTCAGTGGTTCTGATTTaGAAGCAGCAACCCTGTGACTCGCCACCTCGCGTA +
Preference number: 3 (lower is better)
Translates to: APPMANNSVVLI*KQQPCDSPPRV
Trigger: TACGCGAGGTGGCGAGTCACAGGGTTGCTGCTTTCAAATCAGAACCACTGAGTTATTGGCCATGGGAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CAA 90 bp TGCGCTTTCTTACGCTTTCACTTCCAGCAAGCTGGAAGCCTCTTTAAACGTGGACCTTTCTCCCGCGTTTaGGGGAGGGTTCCTCCACGT +
Preference number: 3 (lower is better)
Translates to: CAFLRFHFQQAGSLFKRGPFSRV*GRVPPR
Trigger: ACGTGGAGGAACCCTCCCCAAAACGCGGGAGAAAGG...TCCACGTTTAAAGAGGCTTCCAGCTTGCTGGAAGTGAAAGCGTAAGAAAGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CAA 90 bp GTAAGAGGAGCTGAATCCAGCTCATTAAGATCCTCCTCTGCCCCAGTGTCCCGAAGGAAGGAGGATTACTaGAGGCCAGGAGTTGGACAC +
Preference number: 3 (lower is better)
Translates to: VRGAESSSLRSSSAPVSRRKEDY*RPGVGH
Trigger: GTGTCCAACTCCTGGCCTCAAGTAATCCTCCTTCCT...TCGGGACACTGGGGCAGAGGAGGATCTTAATGAGCTGGATTCAGCTCCTCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR TCA 72 bp ATCCCCATTTGGTTCCTTGACAACTCACTTGGCACCTaGGCCTGGAGAACCCCAACTTTCTTCCTCTCCCAC +
Preference number: 3 (lower is better)
Translates to: IPIWFLDNSLGT*AWRTPTFFLSH
Trigger: GTGGGAGAGGAAGAAAGTTGGGGTTCTCCAGGCTCAGGTGCCAAGTGAGTTGTCAAGGAACCAAATGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
3UTR TCA 72 bp ATGCCGTCATTCAGGCTACACTGTTCTGAACTCACGTaGCCAAGATGTGACAGAGGCTGGATTCCACGTCCC +
Preference number: 3 (lower is better)
Translates to: MPSFRLHCSELT*PRCDRGWIPRP
Trigger: GGGACGTGGAATCCAGCCTCTGTCACATCTTGGTCACGTGAGTTCAGAACAGTGTAGCCTGAATGACGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR CCA 72 bp ACTCCGCTCTTCCCCTTCAATCCCATCCAAATAGTGTaGGGGTTGGCCTCGAGGTTTCTCAACGTCCTTAAG +
Preference number: 3 (lower is better)
Translates to: TPLFPFNPIQIV*GLASRFLNVLK
Trigger: CTTAAGGACGTTGAGAAACCTCGAGGCCAACCCCCACACTATTTGGATGGGATTGAAGGGGAAGAGCGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CAA 90 bp CTTCAATCCCATCCAAATAGTGTGGGGGTTGGCCTCGAGGTTTCTCAACGTCCTACTAGAAACGCGCGCTaGAAGCTCCCTCAGATTGGT +
Preference number: 3 (lower is better)
Translates to: LQSHPNSVGVGLEVSQRPTRNAR*KLPQIG
Trigger: ACCAATCTGAGGGAGCTTCAAGCGCGCGTTTCTAGT...AGGACGTTGAGAAACCTCGAGGCCAACCCCCACACTATTTGGATGGGATTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CAA 90 bp CCTCAGATTGGTCCAGTGAGGGAAGGGGAGGGCTGTAGCAAACTCCACAAAAGTGAGGGGAGCATTTATTaGGTCTTCAAACATTCATGG +
Preference number: 3 (lower is better)
Translates to: PQIGPVREGEGCSKLHKSEGSIY*VFKHSW
Trigger: CCATGAATGTTTGAAGACCAAATAAATGCTCCCCTC...ACTTTTGTGGAGTTTGCTACAGCCCTCCCCTTCCCTCACTGGACCAATCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR-3UTR CAA 90 bp CTTCAATCCCATCCAAATAGTGTGGGGGTTGGCCTCGAGGTTTCTCAACGTCCTATAATGAAGAGGGTTTaGTTAGTTTTGGCGAGATGT +
Preference number: 3 (lower is better)
Translates to: LQSHPNSVGVGLEVSQRPIMKRV*LVLARC
Trigger: ACATCTCGCCAAAACTAACAAAACCCTCTTCATTAT...AGGACGTTGAGAAACCTCGAGGCCAACCCCCACACTATTTGGATGGGATTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR TCA 72 bp ATAGTATATTTATGGGCCCTTTCAGGTCTAAGGTTATaGGGACGTAACCAAGGGCCAAGTGTGCGATCACCT +
Preference number: 3 (lower is better)
Translates to: IVYLWALSGLRL*GRNQGPSVRSP
Trigger: AGGTGATCGCACACTTGGCCCTTGGTTACGTCCTCATAACCTTAGACCTGAAAGGGCCCATAAATATACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319296.10
3UTR TCA 72 bp TCTGTGGAACTACCTTCTGTAAGAGAAATTGCATTTTaGTGTGCGGCGATTCCAGGTGGAGGAAACTGCAGA +
Preference number: 3 (lower is better)
Translates to: SVELPSVREIAF*CAAIPGGGNCR
Trigger: TCTGCAGTTTCCTCCACCTGGAATCGCCGCACATCAAAATGCAATTTCTCTTACAGAAGGTAGTTCCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CCA 72 bp GAAATCTATTGGTTTATTTCAATACATCAGCCACTGTaGAGAGAACTTGTCTCATCAGATCTACATTTTTCT +
Preference number: 3 (lower is better)
Translates to: EIYWFISIHQPL*RELVSSDLHFS
Trigger: AGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAGTGGCTGATGTATTGAAATAAACCAATAGATTTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR GCA 90 bp GGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGCCGCCCGCACTCGGTaGACCCGAAGGGCCGTTCGC +
Preference number: 4 (lower is better)
Translates to: GQPGLPSPQFPRPGGRGEAARTR*TRRAVR
Trigger: GCGAACGGCCCTTCGGGTGCACCGAGTGCGGGCGGC...CTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp GGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAACGCTCGGTGGCAGTaGCGGCCGTGGCGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSRACRPLNFPDPEAGARNARWQ*RPWRQG
Trigger: CCCCTGGCGCCACGGCCGCCACTGCCACCGAGCGTT...CCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp CCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGGTGTGCGTGCGCGCGTaGTTCGCCAGCGTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PGLPSPQFPRPGGRGEEEVCVRA*FASVER
Trigger: CCGCTCCACGCTGGCGAAGCACGCGCGCACGCACAC...CTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp GCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGCCTGGTGTGCCGCCGCCGGTaGTGCCGCAGGTTCGAGGCG +
Preference number: 4 (lower is better)
Translates to: ACRPLNFPDPEAGARRSLVCRRR*CRRFEA
Trigger: CGCCTCGAACCTGCGGCAGCACCGGCGGCGGCACAC...CAGGCTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp CCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGAGGCGGCGCCGCATGTaGGCGCGTCGGTGGCGAATG +
Preference number: 4 (lower is better)
Translates to: PGLPSPQFPRPGGRGEEERRRRM*ARRWRM
Trigger: CATTCGCCACCGACGCGCGCACATGCGGCGCCGCCT...CTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR TCA 90 bp AGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGCGCCAGGGGGCAGCTTaGAGTCCCTGCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SSRAAGPAVPSISQTRRPRQGAA*SPCRSR
Trigger: CCGGCTGCGGCAGGGACTTCAAGCTGCCCCCTGGCG...CGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR TCA 90 bp GGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGGGCATCTTGGTGTCCTaGGGCGGGGAGCAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: GSRACRPLNFPDPEAGARGILVS*GGEQPK
Trigger: CTTCGGCTGCTCCCCGCCTCAGGACACCAAGATGCC...CCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000434417.1
CDS-3UTR GCA 90 bp AGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGCCGCCCGCACTCGGTaGACCCGAAGGGCCGTTCGC +
Preference number: 4 (lower is better)
Translates to: SSRAAGPAVPSISQTRRPAARTR*TRRAVR
Trigger: GCGAACGGCCCTTCGGGTGCACCGAGTGCGGGCGGC...CGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp GGAGCCTGGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCGCTCGCCCGTGTGCGTaGGGCCGTGTTTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: GAWVSAARSKPQRAPPQPARPCA*GRVWSA
Trigger: CGCTGACCAAACACGGCCGCACGCACACGGGCGAGC...GGGCTGCGGAGGGGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp AGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGCGCCAGGCACGAGCTaGCGCCAAAGGCGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: SSRAAGPAVPSISQTRRPAPGTS*RQRRVR
Trigger: GCGGACGCGCCTTTGGCGGCAGCTCGTGCCTGGCGC...CGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp GGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGTCTGAGCGAAGCGCGTaGCGCAGTCGGCGCAAGCGT +
Preference number: 4 (lower is better)
Translates to: GQPGLPSPQFPRPGGRGESERSA*RSRRKR
Trigger: ACGCTTGCGCCGACTGCGGCACGCGCTTCGCTCAGA...CTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp GAGCCTGGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCTAGGCGGCGCCGCATGTaGGCGCGTCGGTGGCGAATG +
Preference number: 4 (lower is better)
Translates to: EPGLVQPGRSPSAPLRSPRRRRM*ARRWRM
Trigger: CATTCGCCACCGACGCGCGCACATGCGGCGCCGCCT...AGGGCTGCGGAGGGGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp GAGCCTGGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCTGCCCCTCCGCAGCCCTaGGGGACTCAGCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: EPGLVQPGRSPSAPLRSPAPPQP*GTQLPS
Trigger: TGAGGGCAGCTGAGTCCCGCAGGGCTGCGGAGGGGC...AGGGCTGCGGAGGGGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp GGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGCAGGGCAGCCGGGCCTaGCGTCCCCTCAATTTCCCA +
Preference number: 4 (lower is better)
Translates to: GSRACRPLNFPDPEAGARQGSRA*RPLNFP
Trigger: TGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTG...CCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp AGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGAACGCTCGGTGGCAGTaGCGGCCGTGGCGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSRAAGPAVPSISQTRRPNARWQ*RPWRQG
Trigger: CCCCTGGCGCCACGGCCGCCACTGCCACCGAGCGTT...CGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp GCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGACGGCGAGCTCAGACTTaGCGTCCTCCGCAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: AGPAVPSISQTRRPGRGGRRAQT*RPPQSP
Trigger: GGGGGACTGCGGAGGACGCCAAGTCTGAGCTCGCCG...TCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434417.1
CDS-3UTR TCA 90 bp GAGCCTGGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCTCAGCGCCGACTTCTGTaGGAAGCGCCGCCCGCACTC +
Preference number: 4 (lower is better)
Translates to: EPGLVQPGRSPSAPLRSPQRRLL*EAPPAL
Trigger: GAGTGCGGGCGGCGCTTCTCACAGAAGTCGGCGCTG...AGGGCTGCGGAGGGGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp GCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGCCTGGCTCGCCCGTGTGCGTaGGGCCGTGTTTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: ACRPLNFPDPEAGARRSLARPCA*GRVWSA
Trigger: CGCTGACCAAACACGGCCGCACGCACACGGGCGAGC...CAGGCTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp CAGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGTGTGCACGCGCCGGTaGTTGGCCAGCGCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: QFQGSRACRPLNFPDPEAVCTRR*LASAEL
Trigger: GAGCTCGGCGCTGGCCAAGCACCGGCGCGTGCACAC...GGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp AGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGTGTGCACGCGCCGGTaGTTGGCCAGCGCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: SSRAAGPAVPSISQTRRPVCTRR*LASAEL
Trigger: GAGCTCGGCGCTGGCCAAGCACCGGCGCGTGCACAC...CGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp GAGCCTGGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCTCGTGCTCCGCCAGGTTaGAGCGGTGGCCGAAGCGAC +
Preference number: 4 (lower is better)
Translates to: EPGLVQPGRSPSAPLRSPRAPPG*SGGRSD
Trigger: GTCGCTTCGGCCACCGCTCCAACCTGGCGGAGCACG...AGGGCTGCGGAGGGGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp GCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGGGCGAGGAGGAGCCTaGGTTAGTGCAGCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: AGPAVPSISQTRRPGRGGGRGGA*VSAARS
Trigger: CGACCTGGCTGCACTAACCCAGGCTCCTCCTCGCCC...TCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp GGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGAGCCCCCTCAGTAGCTaGGATTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: GQPGLPSPQFPRPGGRGESPLSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAATCCCAGCTACTGAGGGGGCT...CTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR GCA 90 bp CCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGCCTGGCCTGCGGGACTCAGCTaGCCTCACACTCCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: PAVPSISQTRRPGRGGAWPAGLS*PHTPGN
Trigger: GTTGCCCGGAGTGTGAGGGCAGCTGAGTCCCGCAGG...CCAGGCTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp CCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGCCTGGCAGGGCAGCCGGGCCTaGCGTCCCCTCAATTTCCCA +
Preference number: 4 (lower is better)
Translates to: PAVPSISQTRRPGRGGAWQGSRA*RPLNFP
Trigger: TGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTG...CCAGGCTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp CGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGCGCGTGCGGCCGTGTTTaGTCAGCGCCGACTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RACRPLNFPDPEAGARRSACGRV*SAPTSV
Trigger: CACAGAAGTCGGCGCTGACCAAACACGGCCGCACGC...GCTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp CCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGGGTGCTGTGCGTAGTTaGAGCTCTGCGCGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: PGLPSPQFPRPGGRGEEEGAVRS*SSARSG
Trigger: GCCGCTTCGCGCAGAGCTCCAACTACGCACAGCACC...CTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp TTCGAGCGTGGCTCGTGGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCGGCAGGTCGGGAAGCGGGCTaGCAGCGGGGCTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FERGSWVFREVAVQRWAAGREAG*QRGSGP
Trigger: AGGACCCGAGCCCCGCTGCCAGCCCGCTTCCCGACC...TGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACGCTCGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp CCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGCCTGGCGCGTCGGTGGCGAATaGAGTGCGAGCTTAGGCGGA +
Preference number: 4 (lower is better)
Translates to: PAVPSISQTRRPGRGGAWRVGGE*SASLGG
Trigger: TCCGCCTAAGCTCGCACTTCATTCGCCACCGACGCG...CCAGGCTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp GGCACTGTTTCCAGGGACCCCGGCAGGGGATTCTCCCTGTCTCCCAGTTCCAGGGTGTGCCGCCGCCGGTaGTGCCGCAGGTTCGAGGCG +
Preference number: 4 (lower is better)
Translates to: GTVSRDPGRGFSLSPSSRVCRRR*CRRFEA
Trigger: CGCCTCGAACCTGCGGCAGCACCGGCGGCGGCACAC...CCTGGAACTGGGAGACAGGGAGAATCCCCTGCCGGGGTCCCTGGAAACAGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp AGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGCCTGCGGGACTCAGCTaGCCTCACACTCCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: SSRAAGPAVPSISQTRRPPAGLS*PHTPGN
Trigger: GTTGCCCGGAGTGTGAGGGCAGCTGAGTCCCGCAGG...CGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp GCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGCCTGGTTCGCCAGGCATCTTaGTGTCCTGAGGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: ACRPLNFPDPEAGARRSLVRQAS*CPEAGS
Trigger: GCTCCCCGCCTCAGGACACCAAGATGCCTGGCGAAC...CAGGCTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434417.1
CDS-3UTR TCA 90 bp AGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGCGCGTCGGTGGCGAATaGAGTGCGAGCTTAGGCGGA +
Preference number: 4 (lower is better)
Translates to: SSRAAGPAVPSISQTRRPRVGGE*SASLGG
Trigger: TCCGCCTAAGCTCGCACTTCATTCGCCACCGACGCG...CGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR TCA 90 bp GCGCTGGGGCCTACTGCCTCCCTTAGGACAGGGATGGGGCGACCTCCATCGTTTCGTGCTGGGGACCCATaGGGCTGGAGAGGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: ALGPTASLRTGMGRPPSFRAGDP*GWRGRH
Trigger: GTGCCGGCCTCTCCAGCCTCATGGGTCCCCAGCACG...AAACGATGGAGGTCGCCCCATCCCTGTCCTAAGGGAGGCAGTAGGCCCCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp CGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGCCTCGCCCTCCCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: RACRPLNFPDPEAGARRSLALPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGGGAGGGCGAG...GCTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CCA 90 bp CTGTCTCCCAGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGTGCTCCGCCAGGTTaGAGCGGTGGCCGAAGCGAC +
Preference number: 4 (lower is better)
Translates to: LSPSSRAAGPAVPSISQTRAPPG*SGGRSD
Trigger: GTCGCTTCGGCCACCGCTCCAACCTGGCGGAGCACG...GGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACTGGGAGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp CAGCCCGGAGCCCACGCTCGAGGACATGTAAGCAGGCCTGGCCCAGCTCGGGGTTTCTCGTGTGTGGGGTaGAGGAGCCGTGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QPGAHARGHVSRPGPARGFSCVG*RSRAGD
Trigger: GTCCCCAGCACGGCTCCTCCACCCCACACACGAGAA...ACCCCGAGCTGGGCCAGGCCTGCTTACATGTCCTCGAGCGTGGGCTCCGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp GGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGCCCCATTTGGTTCCTTaGCAACTCACTTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: GSRACRPLNFPDPEAGARPHLVP*QLTWHL
Trigger: CAGGTGCCAAGTGAGTTGTCAAGGAACCAAATGGGG...CCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR GCA 90 bp CCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGTCCTCTTCCTCTGCCTaGTGTTCGCCAGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: PGLPSPQFPRPGGRGEEESSSSA*CSPGIL
Trigger: CAAGATGCCTGGCGAACAGCAGGCAGAGGAAGAGGA...CTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp TCCCTGTCTCCCAGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGTCTGAGCGAAGCGCGTaGCGCAGTCGGCGCAAGCGT +
Preference number: 4 (lower is better)
Translates to: SLSPSSRAAGPAVPSISQSERSA*RSRRKR
Trigger: ACGCTTGCGCCGACTGCGGCACGCGCTTCGCTCAGA...CTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACTGGGAGACAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp GGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGCAACACAAACCGAGGTaGCGGGAACCCCTTTTAGGT +
Preference number: 4 (lower is better)
Translates to: GSRACRPLNFPDPEAGARQHKPR*REPLLG
Trigger: ACCTAAAAGGGGTTCCCGGCACCTCGGTTTGTGTTG...CCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR GCA 90 bp CGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGCTGGAGCTCTGCCGAATaGAGTGCGTGTCTGATCGTG +
Preference number: 4 (lower is better)
Translates to: RACRPLNFPDPEAGARRSWSSAE*SACLIV
Trigger: CACGATCAGACACGCACTGCATTCGGCAGAGCTCCA...GCTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR GCA 90 bp CAGCCCGGAGCCCACGCTCGAGGACATGTAAGCAGGCCTGGCCCAGCTCGGGGTCAGGGCAATGTACGTTaGGCTGGGGCCTACTGCCTC +
Preference number: 4 (lower is better)
Translates to: QPGAHARGHVSRPGPARGQGNVR*AGAYCL
Trigger: GAGGCAGTAGGCCCCAGCGCAACGTACATTGCCCTG...ACCCCGAGCTGGGCCAGGCCTGCTTACATGTCCTCGAGCGTGGGCTCCGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp GCTGCCGTTTCGCTTTGGCGCCCTCTGGCGCCCATAAACGAAGTGACGCGCCTGGGGGTGGAGGAGCCGTaGTGGGGACCCATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AAVSLWRPLAPINEVTRLGVEEP*WGPMRL
Trigger: CAGCCTCATGGGTCCCCAGCACGGCTCCTCCACCCC...CAGGCGCGTCACTTCGTTTATGGGCGCCAGAGGGCGCCAAAGCGAAACGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp GGCACTGTTTCCAGGGACCCCGGCAGGGGATTCTCCCTGTCTCCCAGTTCCAGGTATAGCCCCACCCCCTaGGGCGGAGCCCGAAGGACC +
Preference number: 4 (lower is better)
Translates to: GTVSRDPGRGFSLSPSSRYSPTP*GGARRT
Trigger: GGTCCTTCGGGCTCCGCCCCAGGGGGTGGGGCTATA...CCTGGAACTGGGAGACAGGGAGAATCCCCTGCCGGGGTCCCTGGAAACAGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000434417.1
CDS-3UTR CCA 90 bp TTCGAGCGTGGCTCGTGGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCGGCAGAGGGTTCCTCCACGTaGTCGGGAAGCGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: FERGSWVFREVAVQRWAAEGSST*SGSGLA
Trigger: TGCCAGCCCGCTTCCCGACCACGTGGAGGAACCCTC...TGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACGCTCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp CCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGTGGAGATTACAGGCATaGGCTGCTAGGTCCAATCGC +
Preference number: 4 (lower is better)
Translates to: PGLPSPQFPRPGGRGEEEWRLQA*AARSNR
Trigger: GCGATTGGACCTAGCAGCTCATGCCTGTAATCTCCA...CTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR GCA 90 bp CCAAGGGCCAAGTGTGCGATCACCTCCAACCAACACAAACCGAGGTGCCGGGAAGCGCCAGGCACGAGCTaGCGCCAAAGGCGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: PRAKCAITSNQHKPRCREAPGTS*RQRRVR
Trigger: GCGGACGCGCCTTTGGCGGCAGCTCGTGCCTGGCGC...TTCCCGGCACCTCGGTTTGTGTTGGTTGGAGGTGATCGCACACTTGGCCCTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR GCA 90 bp GCTGCCGTTTCGCTTTGGCGCCCTCTGGCGCCCATAAACGAAGTGACGCGCCTGTCCGTGAAGTCGCGGTaGAGCGGTGGGCGGCATGTC +
Preference number: 4 (lower is better)
Translates to: AAVSLWRPLAPINEVTRLSVKSR*SGGRHV
Trigger: GACATGCCGCCCACCGCTGCACCGCGACTTCACGGA...CAGGCGCGTCACTTCGTTTATGGGCGCCAGAGGGCGCCAAAGCGAAACGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp CTGTCTCCCAGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCGCGTGCGGCCGTGTTTaGTCAGCGCCGACTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSPSSRAAGPAVPSISQTACGRV*SAPTSV
Trigger: CACAGAAGTCGGCGCTGACCAAACACGGCCGCACGC...GGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACTGGGAGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp AGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGATGTGCGCGCGTCGGTaGCGAATGAAGTGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: SSRAAGPAVPSISQTRRPMCARR*RMKCEL
Trigger: AAGCTCGCACTTCATTCGCCACCGACGCGCGCACAT...CGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp AGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGACGGCCGGTCATTaGTCCGAACATATAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSRAAGPAVPSISQTRRPGTAGH*SEHIAP
Trigger: TGGGGCTATATGTTCGGACCAATGACCGGCCGTCCC...CGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434417.1
CDS-3UTR TCA 90 bp GCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGATCAGGTCTAAGGTTATaGGGACGTAACCAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: AGPAVPSISQTRRPGRGGSGLRL*GRNQGP
Trigger: TGGCCCTTGGTTACGTCCTCATAACCTTAGACCTGA...TCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR TCA 90 bp GAGCCTGGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCTTCTCCTTCACTAGACTaGGATCTGAGGGTCGTGCCT +
Preference number: 4 (lower is better)
Translates to: EPGLVQPGRSPSAPLRSPSPSLD*DLRVVP
Trigger: AGGCACGACCCTCAGATCTCAGTCTAGTGAAGGAGA...AGGGCTGCGGAGGGGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CCA 90 bp CAGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCTGTAGTGATGTGGGGTaGGCACTGTTTCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: QFQGSRACRPLNFPDPEACSDVG*ALFPGT
Trigger: GGTCCCTGGAAACAGTGCCCACCCCACATCACTACA...GGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp CAGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCTCGTGCCTTGCTCACTaGAGCTCTGCCGAATGCAGT +
Preference number: 4 (lower is better)
Translates to: QFQGSRACRPLNFPDPEASCLAH*SSAECS
Trigger: ACTGCATTCGGCAGAGCTCCAGTGAGCAAGGCACGA...GGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CCA 90 bp GCTGCCGTTTCGCTTTGGCGCCCTCTGGCGCCCATAAACGAAGTGACGCGCCTGGGGGGTAGCTGCCTCTaGCCCCTGCATCACCCTCTA +
Preference number: 4 (lower is better)
Translates to: AAVSLWRPLAPINEVTRLGGSCL*PLHHPL
Trigger: TAGAGGGTGATGCAGGGGCCAGAGGCAGCTACCCCC...CAGGCGCGTCACTTCGTTTATGGGCGCCAGAGGGCGCCAAAGCGAAACGGCAGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp TGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCCGAGTGTGGGCGGCATGTCTGTaGCCGGTGGGGAGATTCGTG +
Preference number: 4 (lower is better)
Translates to: WAQRCTPEAREIGWCLRVWAACL*PVGRFV
Trigger: CACGAATCTCCCCACCGGCCACAGACATGCCGCCCA...CACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp TTCGAGCGTGGCTCGTGGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCGGCAAATTGGTCGGAGCTCTaGAGGCGGGGCTTCGAGCGT +
Preference number: 4 (lower is better)
Translates to: FERGSWVFREVAVQRWAANWSEL*RRGFER
Trigger: ACGCTCGAAGCCCCGCCTCCAGAGCTCCGACCAATT...TGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACGCTCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp GGAGCCTGGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCTGTCCATGGGGATCTTaGGTTTCACCACCTCATACT +
Preference number: 4 (lower is better)
Translates to: GAWVSAARSKPQRAPPQPCPWGS*VSPPHT
Trigger: AGTATGAGGTGGTGAAACTCAAGATCCCCATGGACA...GGGCTGCGGAGGGGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR TCA 90 bp CGTGGCTCGTGGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCGGCATGTCTGTGGGCTGTCCCTGGGTaGGCCTTCTTACCTCATCTG +
Preference number: 4 (lower is better)
Translates to: RGSWVFREVAVQRWAACLWAVPG*AFLPHL
Trigger: CAGATGAGGTAAGAAGGCTCACCCAGGGACAGCCCA...CAGACATGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp TCTGGCGCCCATAAACGAAGTGACGCGCCTGCGCTTCCCCCACCCTCTGCCCTTATAGGGTTTTCCACCTaGCGGGCCCTCTTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SGAHKRSDAPALPPPSALIGFST*RALFRC
Trigger: GCAGCGGAAGAGGGCCCGTCAGGTGGAAAACCCTAT...AAGGGCAGAGGGTGGGGGAAGCGCAGGCGCGTCACTTCGTTTATGGGCGCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp GCAAAATGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCGGACTCACGGGTCCCTaGCCTCTAGGGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: AKWAQRCTPEAREIGWCLGLTGP*PLGALS
Trigger: GCTGAGTGCCCCTAGAGGGCAGGGACCCGTGAGTCC...GAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCATTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp AGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGAATGTAGTGATGTaGGGTGGGCACTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSRAAGPAVPSISQTRRPGNVVM*GGHCFQ
Trigger: CTGGAAACAGTGCCCACCCCACATCACTACATTCCC...CGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp GGAGCCTGGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCACTCACAGGCACGGGTaGGGTGAGGATATAATACTT +
Preference number: 4 (lower is better)
Translates to: GAWVSAARSKPQRAPPQPTHRHG*GEDIIL
Trigger: AAGTATTATATCCTCACCCCACCCGTGCCTGTGAGT...GGGCTGCGGAGGGGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CCA 90 bp AGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGCCATGTTGGCCAGGCTaGTATCGAACTCCTAACCTC +
Preference number: 4 (lower is better)
Translates to: SSRAAGPAVPSISQTRRPPCWPG*YRTPNL
Trigger: GAGGTTAGGAGTTCGATACCAGCCTGGCCAACATGG...CGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CCA 90 bp TTCGAGCGTGGCTCGTGGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCGGCACTTTCTCCCGCGTTTTaGGGAGGGTTCCTCCACGTG +
Preference number: 4 (lower is better)
Translates to: FERGSWVFREVAVQRWAALSPAF*GGFLHV
Trigger: CACGTGGAGGAACCCTCCCCAAAACGCGGGAGAAAG...TGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACGCTCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp ACAGGACACAGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCTTACTCGTCGCGGTGCAGCGGTaGGCGGCATGTCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TGHSDGGELKSYCRLILLVAVQR*AACLWP
Trigger: CGGCCACAGACATGCCGCCCACCGCTGCACCGCGAC...GAGTAAGATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCTGTGTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp GCGCCCATAAACGAAGTGACGCGCCTGCGCTTCCCCCACCCTCTGCCCTTCGTCACCTCGCGTATTCCCTaGTGTGAGTGGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: APINEVTRLRFPHPLPFVTSRIP*CEWSLE
Trigger: CTCCAGGCTCCACTCACACCAGGGAATACGCGAGGT...GACGAAGGGCAGAGGGTGGGGGAAGCGCAGGCGCGTCACTTCGTTTATGGGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp CCCTTCAGCCTAGCCCTGGGAAGATACCGGCACCAGATACCGCCTCTGCTCTCCCTTCCTGGTAGAGTCTaGGTTGTGGGGGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PFSLALGRYRHQIPPLLSLPGRV*VVGEGR
Trigger: CCTCCCCTCCCCCACAACTCAGACTCTACCAGGAAG...GGAGAGCAGAGGCGGTATCTGGTGCCGGTATCTTCCCAGGGCTAGGCTGAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp CTGTCTCCCAGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCTCCTCTTCCTCTGCCTaGTGTTCGCCAGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: LSPSSRAAGPAVPSISQTSSSSA*CSPGIL
Trigger: CAAGATGCCTGGCGAACAGCAGGCAGAGGAAGAGGA...GGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACTGGGAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp AGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCTTACTCCGCTCTTCCACCAGATACCGCCTCTaGTCTCCAGGCGCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: SDGGELKSYCRLILLRSSTRYRL*SPGAGG
Trigger: ACCCCCGGCGCCTGGAGAGCAGAGGCGGTATCTGGT...GGAAGAGCGGAGTAAGATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp TGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCCGAGTGGAGAACTCCCGTAATTaGTCGGAGCTCTGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: WAQRCTPEAREIGWCLRVENSRN*SELWRR
Trigger: CCGCCTCCAGAGCTCCGACCAATTACGGGAGTTCTC...CACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp AGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGTGTCCATGGGGATCTTaGGTTTCACCACCTCATACT +
Preference number: 4 (lower is better)
Translates to: SSRAAGPAVPSISQTRRPCPWGS*VSPPHT
Trigger: AGTATGAGGTGGTGAAACTCAAGATCCCCATGGACA...CGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR TCA 90 bp GAGGCAATAGAGAACTCCCGTAATTGGTCGGAGCTCTGGAGGCGGGGCTTCGAGCCGCCGCCTCCATGCTaGGTTTGCTGCGGAACGAGA +
Preference number: 4 (lower is better)
Translates to: EAIENSRNWSELWRRGFEPPPPC*VCCGTR
Trigger: TCTCGTTCCGCAGCAAACTCAGCATGGAGGCGGCGG...CTCGAAGCCCCGCCTCCAGAGCTCCGACCAATTACGGGAGTTCTCTATTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp AGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCTTACTCCGCTCTTCCCTCGTGGGTTTTCCGTaGAGTCGCGGTGCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: SDGGELKSYCRLILLRSSLVGFP*SRGAAV
Trigger: CACCGCTGCACCGCGACTTCACGGAAAACCCACGAG...GGAAGAGCGGAGTAAGATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp GGCACTGTTTCCAGGGACCCCGGCAGGGGATTCTCCCTGTCTCCCAGTTCCAGGTGCTCACTGGAGCTCTaGCGAATGCAGTGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: GTVSRDPGRGFSLSPSSRCSLEL*RMQCVS
Trigger: AGACACGCACTGCATTCGGCAGAGCTCCAGTGAGCA...CCTGGAACTGGGAGACAGGGAGAATCCCCTGCCGGGGTCCCTGGAAACAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR GCA 90 bp GGCACTGTTTCCAGGGACCCCGGCAGGGGATTCTCCCTGTCTCCCAGTTCCAGGTTCAAGAGATCCTCCTaGCTCCGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GTVSRDPGRGFSLSPSSRFKRSS*LRLPKC
Trigger: GCACTTTGGGAGGCGGAGGCAGGAGGATCTCTTGAA...CCTGGAACTGGGAGACAGGGAGAATCCCCTGCCGGGGTCCCTGGAAACAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR GCA 90 bp GCGCCCATAAACGAAGTGACGCGCCTGCGCTTCCCCCACCCTCTGCCCTTCGTCAGGGAAATTGGGTGGTaGCTCCGAGTGGTAACTAGG +
Preference number: 4 (lower is better)
Translates to: APINEVTRLRFPHPLPFVREIGW*LRVVTR
Trigger: CCTAGTTACCACTCGGAGGCACCACCCAATTTCCCT...GACGAAGGGCAGAGGGTGGGGGAAGCGCAGGCGCGTCACTTCGTTTATGGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp CTCTGTGGGCTGTCCCTGGGTGAGCCTTCTTACCTCATCTGCAAAATGGGCGCAGTGGAGGAGCCGTGCTaGGGACCCATGAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LCGLSLGEPSYLICKMGAVEEPC*GPMRLE
Trigger: CTCCAGCCTCATGGGTCCCCAGCACGGCTCCTCCAC...TGCGCCCATTTTGCAGATGAGGTAAGAAGGCTCACCCAGGGACAGCCCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp GCTGCCGTTTCGCTTTGGCGCCCTCTGGCGCCCATAAACGAAGTGACGCGCCTGGGGCAAACGAAGTGCTaGGAGGTGGGAGACGTTATT +
Preference number: 4 (lower is better)
Translates to: AAVSLWRPLAPINEVTRLGQTKC*EVGDVI
Trigger: AATAACGTCTCCCACCTCTCAGCACTTCGTTTGCCC...CAGGCGCGTCACTTCGTTTATGGGCGCCAGAGGGCGCCAAAGCGAAACGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp GACACAGGGCCTAGCGGAAGAATTCCAGGGCCTAAGACTAGAAACGCGCGCTTGTCAGGCTCCGCCCCGTaGGGCAATAGAGAACTCCCG +
Preference number: 4 (lower is better)
Translates to: DTGPSGRIPGPKTRNARLSGSAP*GNRELP
Trigger: CGGGAGTTCTCTATTGCCTCACGGGGCGGAGCCTGA...CAAGCGCGCGTTTCTAGTCTTAGGCCCTGGAATTCTTCCGCTAGGCCCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp CCCTTCAGCCTAGCCCTGGGAAGATACCGGCACCAGATACCGCCTCTGCTCTCCAGTCCTACTGCCGTCTaGTCTTACTCCGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PFSLALGRYRHQIPPLLSSPTAV*SYSALP
Trigger: GGGAAGAGCGGAGTAAGATCAGACGGCAGTAGGACT...GGAGAGCAGAGGCGGTATCTGGTGCCGGTATCTTCCCAGGGCTAGGCTGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp GCAAAATGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCGCGTATTCCCTGGTGTaGGTGGAGCCTGGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: AKWAQRCTPEAREIGWCLAYSLV*VEPGVL
Trigger: GAGAACTCCAGGCTCCACTCACACCAGGGAATACGC...GAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCATTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp AGATCTGAGGGTCGTGCCTTGCTCACTGGAGCTCTGCCGAATGCAGTGCGTGTCCGGTGGCGAATGAAGTaGGAGCTTAGGCGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: RSEGRALLTGALPNAVRVRWRMK*ELRRKR
Trigger: CCGCTTCCGCCTAAGCTCGCACTTCATTCGCCACCG...GACACGCACTGCATTCGGCAGAGCTCCAGTGAGCAAGGCACGACCCTCAGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR GCA 90 bp TCTGGCGCCCATAAACGAAGTGACGCGCCTGCGCTTCCCCCACCCTCTGCCCTTTTGCTGTTGTTGGGATaGAGAGAGGACTCACGGGTC +
Preference number: 4 (lower is better)
Translates to: SGAHKRSDAPALPPPSALLLLLG*REDSRV
Trigger: GACCCGTGAGTCCTCTCTGCATCCCAACAACAGCAA...AAGGGCAGAGGGTGGGGGAAGCGCAGGCGCGTCACTTCGTTTATGGGCGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp CATGCTGAGTTTGCTGCGGAACGAGACTGGGAACAGTTCCATCAGCCTCGGAATCGGGCCCTCTTCCGCTaGCGTTTCGCTTTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: HAEFAAERDWEQFHQPRNRALFR*RFALAP
Trigger: GGGCGCCAAAGCGAAACGGCAGCGGAAGAGGGCCCG...ATTCCGAGGCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGCAAACTCAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp GGCACTGTTTCCAGGGACCCCGGCAGGGGATTCTCCCTGTCTCCCAGTTCCAGGCGGGTTTCACCATGTTaGCCAGGCTGGTATCGAACT +
Preference number: 4 (lower is better)
Translates to: GTVSRDPGRGFSLSPSSRRVSPC*PGWYRT
Trigger: AGTTCGATACCAGCCTGGCCAACATGGTGAAACCCG...CCTGGAACTGGGAGACAGGGAGAATCCCCTGCCGGGGTCCCTGGAAACAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CCA 90 bp CCCTTCAGCCTAGCCCTGGGAAGATACCGGCACCAGATACCGCCTCTGCTCTCCCAATGTACGTTGCGCTaGGGCCTACTGCCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: PFSLALGRYRHQIPPLLSQCTLR*GLLPPL
Trigger: TAAGGGAGGCAGTAGGCCCCAGCGCAACGTACATTG...GGAGAGCAGAGGCGGTATCTGGTGCCGGTATCTTCCCAGGGCTAGGCTGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CAA 72 bp GACCATAAGGGGCCACGTGTTTCAGGGCAATGTACGTaGCGCTGGGGCCTACTGCCTCCCTTAGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: DHKGPRVSGQCT*RWGLLPPLGQG
Trigger: TCCCTGTCCTAAGGGAGGCAGTAGGCCCCAGCGCAACGTACATTGCCCTGAAACACGTGGCCCCTTATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp GCCAAGTGTGCGATCACCTCCAACCAACACAAACCGAGGTGCCGGGAACCCCTTGCAGTCTTCCTCTGTTaGCCAGGCCGGAGTGCAATG +
Preference number: 4 (lower is better)
Translates to: AKCAITSNQHKPRCREPLAVFLC*PGRSAM
Trigger: CATTGCACTCCGGCCTGGGCAACAGAGGAAGACTGC...AAGGGGTTCCCGGCACCTCGGTTTGTGTTGGTTGGAGGTGATCGCACACTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CCA 90 bp GAGGCAATAGAGAACTCCCGTAATTGGTCGGAGCTCTGGAGGCGGGGCTTCGAGGTTCGCCAGGCATCTTaGTGTCCAGCCGAAGGTTCG +
Preference number: 4 (lower is better)
Translates to: EAIENSRNWSELWRRGFEVRQAS*CPAEGS
Trigger: CGAACCTTCGGCTGGACACCAAGATGCCTGGCGAAC...CTCGAAGCCCCGCCTCCAGAGCTCCGACCAATTACGGGAGTTCTCTATTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp GAGAAAGCTGAGGCTGAGGGCGATGAAATTCACATGGCCAGTGGGAGCCAGGATGTTCGCCAGGCATCTTaGTGTCCTGAGGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: EKAEAEGDEIHMASGSQDVRQAS*CPEAGS
Trigger: GCTCCCCGCCTCAGGACACCAAGATGCCTGGCGAAC...ATCCTGGCTCCCACTGGCCATGTGAATTTCATCGCCCTCAGCCTCAGCTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CCA 90 bp TCTGGCGCCCATAAACGAAGTGACGCGCCTGCGCTTCCCCCACCCTCTGCCCTTGCTCTTTGCTGTTGTTaGGATGCAGAGAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: SGAHKRSDAPALPPPSALALCCC*DAERTH
Trigger: GTGAGTCCTCTCTGCATCCCAACAACAGCAAAGAGC...AAGGGCAGAGGGTGGGGGAAGCGCAGGCGCGTCACTTCGTTTATGGGCGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp CACAGGCCAGACCATAAGGGGCCACGTGTTTCAGGGCAATGTACGTTGCGCTGGCACAGGACACAGCGATaGCGGGGAGCTGAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: HRPDHKGPRVSGQCTLRWHRTQR*RGAEVL
Trigger: TAGGACTTCAGCTCCCCGCCATCGCTGTGTCCTGTG...CCAGCGCAACGTACATTGCCCTGAAACACGTGGCCCCTTATGGTCTGGCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp ACAGGACACAGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCTTACTCTGGAGTTCTCGTGTGTaGGGTGGAGGAGCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: TGHSDGGELKSYCRLILLWSSRV*GGGAVL
Trigger: CAGCACGGCTCCTCCACCCCACACACGAGAACTCCA...GAGTAAGATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCTGTGTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp CGAATGCAGTGCGTGTCTGATCGTGAACATAGTATATTTATGGGCCCTTTCAGGCGCCAGGGGGCAGCTTaGAGTCCCTGCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RMQCVSDREHSIFMGPFRRQGAA*SPCRSR
Trigger: CCGGCTGCGGCAGGGACTTCAAGCTGCCCCCTGGCG...CCTGAAAGGGCCCATAAATATACTATGTTCACGATCAGACACGCACTGCATTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR TCA 90 bp AGATCTGAGGGTCGTGCCTTGCTCACTGGAGCTCTGCCGAATGCAGTGCGTGTCTCTCCCAGGTTCAAGTaGTTCTCATGCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RSEGRALLTGALPNAVRVSPRFK*FSCLSP
Trigger: GGGGCTGAGGCATGAGAATCACTTGAACCTGGGAGA...GACACGCACTGCATTCGGCAGAGCTCCAGTGAGCAAGGCACGACCCTCAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR TCA 90 bp TCAACCACAGGACACAGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCCTAGAAACGCGCGCTTaGAGCTCCCTCAGATTGGTC +
Preference number: 4 (lower is better)
Translates to: STTGHSDGGELKSYCRLILETRA*SSLRLV
Trigger: GACCAATCTGAGGGAGCTTCAAGCGCGCGTTTCTAG...GATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCTGTGTCCTGTGGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp CACAGGCCAGACCATAAGGGGCCACGTGTTTCAGGGCAATGTACGTTGCGCTGGAAAGCAGCAACCCTGTaGCTCGCCACCTCGCGTATT +
Preference number: 4 (lower is better)
Translates to: HRPDHKGPRVSGQCTLRWKAATL*LATSRI
Trigger: AATACGCGAGGTGGCGAGTCACAGGGTTGCTGCTTT...CCAGCGCAACGTACATTGCCCTGAAACACGTGGCCCCTTATGGTCTGGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp CATGCTGAGTTTGCTGCGGAACGAGACTGGGAACAGTTCCATCAGCCTCGGAATGGGAGAGGACACTGCTaGTCCCGGCCGGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HAEFAAERDWEQFHQPRNGRGHC*SRPVQL
Trigger: AAGCTGAACCGGCCGGGAGCAGCAGTGTCCTCTCCC...ATTCCGAGGCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGCAAACTCAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp TGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCCGAGTGTCTAACCCGGAGACTTaGACTTACACTCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: WAQRCTPEAREIGWCLRVSNPET*TYTPLS
Trigger: GGACAAAGGAGTGTAAGTCCAAGTCTCCGGGTTAGA...CACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp CAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCCGAGTGGTAACTTCTGTGGGCTGTCCCTaGGTGAGCCTTCTTACCTCA +
Preference number: 4 (lower is better)
Translates to: QRCTPEAREIGWCLRVVTSVGCP*VSLLTS
Trigger: TGAGGTAAGAAGGCTCACCCAGGGACAGCCCACAGA...AGTTACCACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp CCTCAGATTGGTCCAGTGAGGGAAGGGGAGGGCTGTAGCAAACTCCACAAAAGTGCTGCCGTTTCGCTTTaGCGCCCTCTGGCGCCCATA +
Preference number: 4 (lower is better)
Translates to: PQIGPVREGEGCSKLHKSAAVSL*RPLAPI
Trigger: TATGGGCGCCAGAGGGCGCCAAAGCGAAACGGCAGC...ACTTTTGTGGAGTTTGCTACAGCCCTCCCCTTCCCTCACTGGACCAATCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp GGCACTGTTTCCAGGGACCCCGGCAGGGGATTCTCCCTGTCTCCCAGTTCCAGGCTTTGTTCTCCAGGCTaGTCTCAAACTCTTGACTTC +
Preference number: 4 (lower is better)
Translates to: GTVSRDPGRGFSLSPSSRLCSPG*SQTLDF
Trigger: GAAGTCAAGAGTTTGAGATCAGCCTGGAGAACAAAG...CCTGGAACTGGGAGACAGGGAGAATCCCCTGCCGGGGTCCCTGGAAACAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR TCA 90 bp CTGAGGCTGAGGGCGATGAAATTCACATGGCCAGTGGGAGCCAGGATGGACTCACACGTGACCAAGATGTaGCAGAGGCTGGATTCCACG +
Preference number: 4 (lower is better)
Translates to: LRLRAMKFTWPVGARMDSHVTKM*QRLDST
Trigger: CGTGGAATCCAGCCTCTGTCACATCTTGGTCACGTG...TGAGTCCATCCTGGCTCCCACTGGCCATGTGAATTTCATCGCCCTCAGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CCA 90 bp TCAACCACAGGACACAGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCATTCCCTGGTGTGAGTaGAGCCTGGAGTTCTCGTGT +
Preference number: 4 (lower is better)
Translates to: STTGHSDGGELKSYCRLIIPWCE*SLEFSC
Trigger: ACACGAGAACTCCAGGCTCCACTCACACCAGGGAAT...GATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCTGTGTCCTGTGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp AGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCTTACTCCGCTCTTCCTTCAGTTTCCCCTCCTaGTTGCTAGGCTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SDGGELKSYCRLILLRSSFSFPS*LLGSLL
Trigger: CAGCAAAGAGCCTAGCAATCAGGAGGGGAAACTGAA...GGAAGAGCGGAGTAAGATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp GAGTTTGCTGCGGAACGAGACTGGGAACAGTTCCATCAGCCTCGGAATCTCCTCTCCTCTTCCTCTGCCTaGTGTTCGCCAGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: EFAAERDWEQFHQPRNLLSSSSA*CSPGIL
Trigger: CAAGATGCCTGGCGAACAGCAGGCAGAGGAAGAGGA...GAGGAGATTCCGAGGCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGCAAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp GGATATAATACTTTATTCACTAACACGGGCCGAGGGAATGTAGTGATGTGGGGTGCCCCTCCGCAGCCCTaGGGGACTCAGCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GYNTLFTNTGRGNVVMWGAPPQP*GTQLPS
Trigger: TGAGGGCAGCTGAGTCCCGCAGGGCTGCGGAGGGGC...ACCCCACATCACTACATTCCCTCGGCCCGTGTTAGTGAATAAAGTATTATATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CCA 90 bp TCCCTGTCTCCCAGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGGTTTACATCCCCATTTaGTTCCTTGACAACTCACTT +
Preference number: 4 (lower is better)
Translates to: SLSPSSRAAGPAVPSISQVYIPI*FLDNSL
Trigger: AAGTGAGTTGTCAAGGAACCAAATGGGGATGTAAAC...CTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACTGGGAGACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CCA 90 bp GCCAAGTGTGCGATCACCTCCAACCAACACAAACCGAGGTGCCGGGAACCCCTTCACTGTGCGCCGGGCTaGGTAAGCTTACATAACAAA +
Preference number: 4 (lower is better)
Translates to: AKCAITSNQHKPRCREPLHCAPG*VSLHNK
Trigger: TTTGTTATGTAAGCTTACCCAGCCCGGCGCACAGTG...AAGGGGTTCCCGGCACCTCGGTTTGTGTTGGTTGGAGGTGATCGCACACTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CCA 90 bp CCTCAGATTGGTCCAGTGAGGGAAGGGGAGGGCTGTAGCAAACTCCACAAAAGTCTCGGAATCTCCTCCTaGCCTTGGTTGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PQIGPVREGEGCSKLHKSLGISS*PWLGKW
Trigger: CCACTTCCCCAACCAAGGCCAGGAGGAGATTCCGAG...ACTTTTGTGGAGTTTGCTACAGCCCTCCCCTTCCCTCACTGGACCAATCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp GAGGCAATAGAGAACTCCCGTAATTGGTCGGAGCTCTGGAGGCGGGGCTTCGAGAGTTGCAGAATCTCCTaGTCCCAGGCCCCATTACAT +
Preference number: 4 (lower is better)
Translates to: EAIENSRNWSELWRRGFESCRIS*SQAPLH
Trigger: ATGTAATGGGGCCTGGGACCAGGAGATTCTGCAACT...CTCGAAGCCCCGCCTCCAGAGCTCCGACCAATTACGGGAGTTCTCTATTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp GACACAGGGCCTAGCGGAAGAATTCCAGGGCCTAAGACTAGAAACGCGCGCTTGGCAAGGGAAATTGGGTaGTGCCTCCGAGTGGTAACT +
Preference number: 4 (lower is better)
Translates to: DTGPSGRIPGPKTRNARLAREIG*CLRVVT
Trigger: AGTTACCACTCGGAGGCACCACCCAATTTCCCTTGC...CAAGCGCGCGTTTCTAGTCTTAGGCCCTGGAATTCTTCCGCTAGGCCCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp TGCGCTTTCTTACGCTTTCACTTCCAGCAAGCTGGAAGCCTCTTTAAACGTGGATGGCCCAGCTCGGGGTaGGGAAGTCGCCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: CAFLRFHFQQAGSLFKRGWPSSG*GSRPFL
Trigger: GAGAAAGGGGCGACTTCCCCACCCCGAGCTGGGCCA...TCCACGTTTAAAGAGGCTTCCAGCTTGCTGGAAGTGAAAGCGTAAGAAAGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CAA 72 bp CTTTGTCCTATTTCAGCCGCCGCCTCCATGCTGAGTTaGCTGCGGAACGAGACTGGGAACAGTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LCPISAAASMLS*LRNETGNSSIS
Trigger: GCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGCAAACTCAGCATGGAGGCGGCGGCTGAAATAGGACAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CAA 72 bp GGAAGAATTCCAGGGCCTAAGACTAGAAACGCGCGCTaGAAGCTCCCTCAGATTGGTCCAGTGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GRIPGPKTRNAR*KLPQIGPVREG
Trigger: CCCTTCCCTCACTGGACCAATCTGAGGGAGCTTCAAGCGCGCGTTTCTAGTCTTAGGCCCTGGAATTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp GCCAAGTGTGCGATCACCTCCAACCAACACAAACCGAGGTGCCGGGAACCCCTTCAGGCACGGGTGGGGTaGGGATATAATACTTTATTC +
Preference number: 4 (lower is better)
Translates to: AKCAITSNQHKPRCREPLQARVG*GYNTLF
Trigger: GAATAAAGTATTATATCCTCACCCCACCCGTGCCTG...AAGGGGTTCCCGGCACCTCGGTTTGTGTTGGTTGGAGGTGATCGCACACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR TCA 90 bp GGAGCTGAATCCAGCTCATTAAGATCCTCCTCTGCCCCAGTGTCCCGAGAAAGGCCATACAAGCACTGTTaGTGTCTCCAGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GAESSSLRSSSAPVSRERPYKHC*CLQPRR
Trigger: TCTCCTGGGCTGGAGACATCAACAGTGCTTGTATGG...CCTTTCTCGGGACACTGGGGCAGAGGAGGATCTTAATGAGCTGGATTCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR TCA 90 bp GTAAGAGGAGCTGAATCCAGCTCATTAAGATCCTCCTCTGCCCCAGTGTCCCGATCCTGTCACCCGCCTTaGGCTGGGTGTTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: VRGAESSSLRSSSAPVSRSCHPP*AGCSLF
Trigger: AAAGAGAGAACACCCAGCTCAAGGCGGGTGACAGGA...TCGGGACACTGGGGCAGAGGAGGATCTTAATGAGCTGGATTCAGCTCCTCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR TCA 90 bp GTTCAGTTTCCCCTCCTGATTGCTAGGCTCTTTGCTGTTGTTGGGATGCAGAGAGCAGCGGTGCACACCTaGGGCAAGGGAAATTGGGTG +
Preference number: 4 (lower is better)
Translates to: VQFPLLIARLFAVVGMQRAAVHT*GKGNWV
Trigger: CACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGC...TCTCTGCATCCCAACAACAGCAAAGAGCCTAGCAATCAGGAGGGGAAACTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp TCCTCTGCCCCAGTGTCCCGAGAAAGGCCAGGTAGGCTAAGTGAGATCAAATTCTCCTCTTCCTCTGCCTaGTGTTCGCCAGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: SSAPVSRERPGRLSEIKFSSSSA*CSPGIL
Trigger: CAAGATGCCTGGCGAACAGCAGGCAGAGGAAGAGGA...GAATTTGATCTCACTTAGCCTACCTGGCCTTTCTCGGGACACTGGGGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CCA 90 bp TGTGGGGGTTGGCCTCGAGGTTTCTCAACGTCCTTAAGCCCTGATTTAATACCTCATGTCTGTGGCCGGTaGGGAGATTCGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: CGGWPRGFSTSLSPDLIPHVCGR*GDSWGH
Trigger: GTGTCCCCACGAATCTCCCCACCGGCCACAGACATG...AGGTATTAAATCAGGGCTTAAGGACGTTGAGAAACCTCGAGGCCAACCCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp CCTCAGATTGGTCCAGTGAGGGAAGGGGAGGGCTGTAGCAAACTCCACAAAAGTGAAGCTCCCTCAGATTaGTCCAGTGAGGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: PQIGPVREGEGCSKLHKSEAPSD*SSEGRG
Trigger: TCCCCTTCCCTCACTGGACCAATCTGAGGGAGCTTC...ACTTTTGTGGAGTTTGCTACAGCCCTCCCCTTCCCTCACTGGACCAATCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp CTTCAATCCCATCCAAATAGTGTGGGGGTTGGCCTCGAGGTTTCTCAACGTCCTGGTGTGAGTGGAGCCTaGAGTTCTCGTGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LQSHPNSVGVGLEVSQRPGVSGA*SSRVWG
Trigger: ACCCCACACACGAGAACTCCAGGCTCCACTCACACC...AGGACGTTGAGAAACCTCGAGGCCAACCCCCACACTATTTGGATGGGATTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp GACACAGGGCCTAGCGGAAGAATTCCAGGGCCTAAGACTAGAAACGCGCGCTTGTGTCCATGGGGATCTTaGGTTTCACCACCTCATACT +
Preference number: 4 (lower is better)
Translates to: DTGPSGRIPGPKTRNARLCPWGS*VSPPHT
Trigger: AGTATGAGGTGGTGAAACTCAAGATCCCCATGGACA...CAAGCGCGCGTTTCTAGTCTTAGGCCCTGGAATTCTTCCGCTAGGCCCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp CTCTGTGGGCTGTCCCTGGGTGAGCCTTCTTACCTCATCTGCAAAATGGGCGCACTGGCAGAACTCTTGTaGGTAGATGGAAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LCGLSLGEPSYLICKMGALAELL*VDGKLP
Trigger: AGGAAGCTTTCCATCTACTCACAAGAGTTCTGCCAG...TGCGCCCATTTTGCAGATGAGGTAAGAAGGCTCACCCAGGGACAGCCCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp GACACAGGGCCTAGCGGAAGAATTCCAGGGCCTAAGACTAGAAACGCGCGCTTGCGCCCATTTTATAGATaGGGGAACCAAGTTCCGGAA +
Preference number: 4 (lower is better)
Translates to: DTGPSGRIPGPKTRNARLRPFYR*GNQVPE
Trigger: TTCCGGAACTTGGTTCCCTCATCTATAAAATGGGCG...CAAGCGCGCGTTTCTAGTCTTAGGCCCTGGAATTCTTCCGCTAGGCCCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp CTCTGTGGGCTGTCCCTGGGTGAGCCTTCTTACCTCATCTGCAAAATGGGCGCATCAGTGGTTCTGATTTaGAAGCAGCAACCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LCGLSLGEPSYLICKMGASVVLI*KQQPCD
Trigger: GTCACAGGGTTGCTGCTTTCAAATCAGAACCACTGA...TGCGCCCATTTTGCAGATGAGGTAAGAAGGCTCACCCAGGGACAGCCCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp CTCTGTGGGCTGTCCCTGGGTGAGCCTTCTTACCTCATCTGCAAAATGGGCGCAAATTGCATTTTGATGTaGGGCGATTCCAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LCGLSLGEPSYLICKMGANCILM*GDSRWR
Trigger: CCTCCACCTGGAATCGCCGCACATCAAAATGCAATT...TGCGCCCATTTTGCAGATGAGGTAAGAAGGCTCACCCAGGGACAGCCCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp GCTGCCGTTTCGCTTTGGCGCCCTCTGGCGCCCATAAACGAAGTGACGCGCCTGTTCTGTAAGAGAAATTaGATTTTGATGTGCGGCGAT +
Preference number: 4 (lower is better)
Translates to: AAVSLWRPLAPINEVTRLFCKRN*ILMCGD
Trigger: ATCGCCGCACATCAAAATGCAATTTCTCTTACAGAA...CAGGCGCGTCACTTCGTTTATGGGCGCCAGAGGGCGCCAAAGCGAAACGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp AGATGTGACAGAGGCTGGATTCCACGTCCCTGGCACACTCCAAGAGGGATTCAACAGGAGAAGGGGCCTTaGATGCCCGAGGAAAAATCT +
Preference number: 4 (lower is better)
Translates to: RCDRGWIPRPWHTPRGIQQEKGP*MPEEKS
Trigger: AGATTTTTCCTCGGGCATCCAAGGCCCCTTCTCCTG...TTGAATCCCTCTTGGAGTGTGCCAGGGACGTGGAATCCAGCCTCTGTCACATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CCA 90 bp GTTCAGTTTCCCCTCCTGATTGCTAGGCTCTTTGCTGTTGTTGGGATGCAGAGATTCGAGCGTGGCTCGTaGGTTTTCCGTGAAGTCGCG +
Preference number: 4 (lower is better)
Translates to: VQFPLLIARLFAVVGMQRFERGS*VFREVA
Trigger: CGCGACTTCACGGAAAACCCACGAGCCACGCTCGAA...TCTCTGCATCCCAACAACAGCAAAGAGCCTAGCAATCAGGAGGGGAAACTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CAA 72 bp TCACCCTCTAACCCGGAGACTTGGACTTACACTCCTTaGTCCTATTTCAGCCGCCGCCTCCATGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: SPSNPETWTYTP*SYFSRRLHAEF
Trigger: AAACTCAGCATGGAGGCGGCGGCTGAAATAGGACAAAGGAGTGTAAGTCCAAGTCTCCGGGTTAGAGGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp CCATTTGGTTCCTTGACAACTCACTTGGCACCTGAGCCTGGAGAACCCCAACTTACCAAGGGCCAAGTGTaGGATCACCTCCAACCAACA +
Preference number: 4 (lower is better)
Translates to: PFGSLTTHLAPEPGEPQLTKGQV*DHLQPT
Trigger: TGTTGGTTGGAGGTGATCGCACACTTGGCCCTTGGT...AAGTTGGGGTTCTCCAGGCTCAGGTGCCAAGTGAGTTGTCAAGGAACCAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR GCA 90 bp AGAGGAGCTGAATCCAGCTCATTAAGATCCTCCTCTGCCCCAGTGTCCCGAGAAATTAAGATCCTCCTCTaGCCCAGTGTCCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RGAESSSLRSSSAPVSREIKILL*PSVPRK
Trigger: CTTTCTCGGGACACTGGGGCAGAGGAGGATCTTAAT...TTCTCGGGACACTGGGGCAGAGGAGGATCTTAATGAGCTGGATTCAGCTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR GCA 90 bp CTTCAATCCCATCCAAATAGTGTGGGGGTTGGCCTCGAGGTTTCTCAACGTCCTCCAGGTGGAGGAAACTaGAGAAGTAGCAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LQSHPNSVGVGLEVSQRPPGGGN*RSSSRR
Trigger: TCTCCTGCTGCTACTTCTGCAGTTTCCTCCACCTGG...AGGACGTTGAGAAACCTCGAGGCCAACCCCCACACTATTTGGATGGGATTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp TGCGCTTTCTTACGCTTTCACTTCCAGCAAGCTGGAAGCCTCTTTAAACGTGGAAAATGGGCGCAGCGGTaGACACCTGAGGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: CAFLRFHFQQAGSLFKRGKWAQR*TPEARE
Trigger: TTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCATTT...TCCACGTTTAAAGAGGCTTCCAGCTTGCTGGAAGTGAAAGCGTAAGAAAGCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp TGCGCTTTCTTACGCTTTCACTTCCAGCAAGCTGGAAGCCTCTTTAAACGTGGACCCTTAGGACAGGGATaGGGCGACCTCCATCGTTTC +
Preference number: 4 (lower is better)
Translates to: CAFLRFHFQQAGSLFKRGPLGQG*GDLHRF
Trigger: GAAACGATGGAGGTCGCCCCATCCCTGTCCTAAGGG...TCCACGTTTAAAGAGGCTTCCAGCTTGCTGGAAGTGAAAGCGTAAGAAAGCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp GCTGTAGCAAACTCCACAAAAGTCATTGGTCTCTTTCCTCAGGCTCCGCCCCGTTCTCTGCTCCTCCCATaGCCAATAACTCAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: AVANSTKVIGLFPQAPPRSLLLP*PITQWF
Trigger: GAACCACTGAGTTATTGGCCATGGGAGGAGCAGAGA...ACGGGGCGGAGCCTGAGGAAAGAGACCAATGACTTTTGTGGAGTTTGCTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp GGATATAATACTTTATTCACTAACACGGGCCGAGGGAATGTAGTGATGTGGGGTCGGTGGCGAATGAAGTaGGAGCTTAGGCGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GYNTLFTNTGRGNVVMWGRWRMK*ELRRKR
Trigger: CCGCTTCCGCCTAAGCTCGCACTTCATTCGCCACCG...ACCCCACATCACTACATTCCCTCGGCCCGTGTTAGTGAATAAAGTATTATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR GCA 90 bp GGATATAATACTTTATTCACTAACACGGGCCGAGGGAATGTAGTGATGTGGGGTCTGAGGGTCGTGCCTTaGTCACTGGAGCTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: GYNTLFTNTGRGNVVMWGLRVVP*SLELCR
Trigger: TCGGCAGAGCTCCAGTGAGCAAGGCACGACCCTCAG...ACCCCACATCACTACATTCCCTCGGCCCGTGTTAGTGAATAAAGTATTATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR GCA 90 bp GCAAAATGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCAAAGAGGAAATGACCTaGACAATACCATCCAATGAA +
Preference number: 4 (lower is better)
Translates to: AKWAQRCTPEAREIGWCLKEEMT*TIPSNE
Trigger: TTCATTGGATGGTATTGTGCAGGTCATTTCCTCTTT...GAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCATTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR GCA 90 bp TGTGGGGGTTGGCCTCGAGGTTTCTCAACGTCCTTAAGCCCTGATTTAATACCTGAGCTGAAGTCCTACTaGCGTCTGATCTTACTCCGC +
Preference number: 4 (lower is better)
Translates to: CGGWPRGFSTSLSPDLIPELKSY*RLILLR
Trigger: GCGGAGTAAGATCAGACGGCAGTAGGACTTCAGCTC...AGGTATTAAATCAGGGCTTAAGGACGTTGAGAAACCTCGAGGCCAACCCCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp GTAAGAGGAGCTGAATCCAGCTCATTAAGATCCTCCTCTGCCCCAGTGTCCCGATCACCCGCCTTGAGCTaGGTGTTCTCTCTTTTGATA +
Preference number: 4 (lower is better)
Translates to: VRGAESSSLRSSSAPVSRSPALS*VFSLLI
Trigger: TATCAAAAGAGAGAACACCCAGCTCAAGGCGGGTGA...TCGGGACACTGGGGCAGAGGAGGATCTTAATGAGCTGGATTCAGCTCCTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR TCA 90 bp ACTGTTCTGAACTCACGTGACCAAGATGTGACAGAGGCTGGATTCCACGTCCCTTGTCCATGGGGATCTTaGGTTTCACCACCTCATACT +
Preference number: 4 (lower is better)
Translates to: TVLNSRDQDVTEAGFHVPCPWGS*VSPPHT
Trigger: AGTATGAGGTGGTGAAACTCAAGATCCCCATGGACA...AGGGACGTGGAATCCAGCCTCTGTCACATCTTGGTCACGTGAGTTCAGAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR TCA 90 bp AGAGGAGCTGAATCCAGCTCATTAAGATCCTCCTCTGCCCCAGTGTCCCGAGAACTTGGTAAGAGGAGCTaGATCCAGCTCATTAAGATC +
Preference number: 4 (lower is better)
Translates to: RGAESSSLRSSSAPVSRELGKRS*IQLIKI
Trigger: GATCTTAATGAGCTGGATTCAGCTCCTCTTACCAAG...TTCTCGGGACACTGGGGCAGAGGAGGATCTTAATGAGCTGGATTCAGCTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR GCA 90 bp ATCAGCCACTGTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTGGCCCGTCCAGGTGTGGTGGGGTaGACTTGTAGTCCCAACAAC +
Preference number: 4 (lower is better)
Translates to: ISHCGENLSHQIYIFLARPGVVG*TCSPNN
Trigger: GTTGTTGGGACTACAAGTGCACCCCACCACACCTGG...ACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAGTGGCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR GCA 90 bp CTGAGGGCGATGAAATTCACATGGCCAGTGGGAGCCAGGATGGACTCAGGGTGCCACATTTTCCAGTCTTaGCCTGGTTTTGAAATCTAT +
Preference number: 4 (lower is better)
Translates to: LRAMKFTWPVGARMDSGCHIFQS*PGFEIY
Trigger: ATAGATTTCAAAACCAGGGCAAGACTGGAAAATGTG...GCACCCTGAGTCCATCCTGGCTCCCACTGGCCATGTGAATTTCATCGCCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CCA 90 bp GGATATAATACTTTATTCACTAACACGGGCCGAGGGAATGTAGTGATGTGGGGTGTTCGCCAGGCATCTTaGTGTCCAGCCGAAGGTTCG +
Preference number: 4 (lower is better)
Translates to: GYNTLFTNTGRGNVVMWGVRQAS*CPAEGS
Trigger: CGAACCTTCGGCTGGACACCAAGATGCCTGGCGAAC...ACCCCACATCACTACATTCCCTCGGCCCGTGTTAGTGAATAAAGTATTATATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CCA 90 bp CGAATGCAGTGCGTGTCTGATCGTGAACATAGTATATTTATGGGCCCTTTCAGGTGTAGTGATGTGGGGTaGGCACTGTTTCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: RMQCVSDREHSIFMGPFRCSDVG*ALFPGT
Trigger: GGTCCCTGGAAACAGTGCCCACCCCACATCACTACA...CCTGAAAGGGCCCATAAATATACTATGTTCACGATCAGACACGCACTGCATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319296.10
3UTR CAA 72 bp AGGTTTACATCCCCATTTGGTTCCTTGACAACTCACTaGGCACCTGAGCCTGGAGAACCCCAACTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RFTSPFGSLTTH*APEPGEPQLSS
Trigger: GGAAGAAAGTTGGGGTTCTCCAGGCTCAGGTGCCAAGTGAGTTGTCAAGGAACCAAATGGGGATGTAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR TCA 90 bp ATCAGCCACTGTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTGGCCCGTAGTTCAAGGCTGCAGTaGGCTACAATCACGTGCCAC +
Preference number: 4 (lower is better)
Translates to: ISHCGENLSHQIYIFLARSSRLQ*ATITCH
Trigger: GTGGCACGTGATTGTAGCTCACTGCAGCCTTGAACT...ACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAGTGGCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR GCA 90 bp GGATATAATACTTTATTCACTAACACGGGCCGAGGGAATGTAGTGATGTGGGGTTTGCCCAGGCCGGAGTaGAATGGCACTATCTCGGTT +
Preference number: 4 (lower is better)
Translates to: GYNTLFTNTGRGNVVMWGLPRPE*NGTISV
Trigger: AACCGAGATAGTGCCATTGCACTCCGGCCTGGGCAA...ACCCCACATCACTACATTCCCTCGGCCCGTGTTAGTGAATAAAGTATTATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CCA 90 bp CACCTCACTCACAGGCACGGGTGGGGTGAGGATATAATACTTTATTCACTAACAGGGAATGTAGTGATGTaGGGTGGGCACTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: HLTHRHGWGEDIILYSLTGNVVM*GGHCFQ
Trigger: CTGGAAACAGTGCCCACCCCACATCACTACATTCCC...TGTTAGTGAATAAAGTATTATATCCTCACCCCACCCGTGCCTGTGAGTGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CCA 90 bp ATCAGCCACTGTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTGGCCCGTTGGATTCCACGTCCCTaGCACACTCCAAGAGGGATT +
Preference number: 4 (lower is better)
Translates to: ISHCGENLSHQIYIFLARWIPRP*HTPRGI
Trigger: AATCCCTCTTGGAGTGTGCCAGGGACGTGGAATCCA...ACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAGTGGCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR GCA 90 bp ATCAGCCACTGTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTGGCCCGTAGAAGGGGCCTTGGATaGCCGAGGAAAAATCTTGGT +
Preference number: 4 (lower is better)
Translates to: ISHCGENLSHQIYIFLARRRGLG*PRKNLG
Trigger: ACCAAGATTTTTCCTCGGGCATCCAAGGCCCCTTCT...ACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAGTGGCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CCA 90 bp ACTGTTCTGAACTCACGTGACCAAGATGTGACAGAGGCTGGATTCCACGTCCCTATACATCAGCCACTGTaGAGAGAACTTGTCTCATCA +
Preference number: 4 (lower is better)
Translates to: TVLNSRDQDVTEAGFHVPIHQPL*RELVSS
Trigger: TGATGAGACAAGTTCTCTCCACAGTGGCTGATGTAT...AGGGACGTGGAATCCAGCCTCTGTCACATCTTGGTCACGTGAGTTCAGAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CCA 90 bp GTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTGGCCCGTTTTTCCTTGGAATTCACATGGCCAGTaGGAGCCAGGATGGACTCAG +
Preference number: 4 (lower is better)
Translates to: VERTCLIRSTFFWPVFPWNSHGQ*EPGWTQ
Trigger: CTGAGTCCATCCTGGCTCCCACTGGCCATGTGAATT...CCAAGGAAAAACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CCA 90 bp CTGTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTGGCCCGTTTTTCCTTTGGCCCGTTTTTCCTTaGCACCCTCTTTCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LWRELVSSDLHFSGPFFLWPVFP*HPLSGD
Trigger: GTCACCTGAAAGAGGGTGCCAAGGAAAAACGGGCCA...AAGGAAAAACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR CAA 72 bp GTCTGTGGAACTACCTTCTGTAAGAGAAATTGCATTTaGATGTGCGGCGATTCCAGGTGGAGGAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: VCGTTFCKRNCI*MCGDSRWRKLQ
Trigger: CTGCAGTTTCCTCCACCTGGAATCGCCGCACATCAAAATGCAATTTCTCTTACAGAAGGTAGTTCCACAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
3UTR CAA 72 bp GCAAACGAAGTGCTGAGAGGTGGGAGACGTTATTTTTaGCTGGAGGAGGTCAAGAAAGGCTTCTTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: ANEVLRGGRRYF*LEEVKKGFLEE
Trigger: TTCCTCTAAGAAGCCTTTCTTGACCTCCTCCAGCAAAAAATAACGTCTCCCACCTCTCAGCACTTCGTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp CTATTGGTTTATTTCAATACATCAGCCACTGTGGAGAGAACTTGTCTCATCAGAAGATGTGACAGAGGCTaGATTCCACGTCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LLVYFNTSATVERTCLIRRCDRG*IPRPWH
Trigger: GTGCCAGGGACGTGGAATCCAGCCTCTGTCACATCT...TCTGATGAGACAAGTTCTCTCCACAGTGGCTGATGTATTGAAATAAACCAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CCA 90 bp TCATTAATTTCTCTAGGGCATATACCTAGAATTGCAATTGTCACAGCCTTGGGAGCTGCGGAACGAGACTaGGAACAGTTCCATCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLISLGHIPRIAIVTALGAAERD*EQFHQP
Trigger: AGGCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGC...TCCCAAGGCTGTGACAATTGCAATTCTAGGTATATGCCCTAGAGAAATTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR TCA 90 bp CTATTGGTTTATTTCAATACATCAGCCACTGTGGAGAGAACTTGTCTCATCAGAGGAAGGAGGATCACTTaGGCCCAAGAGTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LLVYFNTSATVERTCLIRGRRIT*AQEFKA
Trigger: AGCCTTGAACTCTTGGGCTCAAGTGATCCTCCTTCC...TCTGATGAGACAAGTTCTCTCCACAGTGGCTGATGTATTGAAATAAACCAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR GCA 90 bp GTGTCTGATCGTGAACATAGTATATTTATGGGCCCTTTCAGGTCTAAGGTTATGCTCTGCCGAATGCAGTaGGTGTCTGATCGTGAACAT +
Preference number: 4 (lower is better)
Translates to: VSDREHSIFMGPFRSKVMLCRMQ*VSDREH
Trigger: ATGTTCACGATCAGACACGCACTGCATTCGGCAGAG...CATAACCTTAGACCTGAAAGGGCCCATAAATATACTATGTTCACGATCAGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CCA 90 bp TGTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTGGCCCGTTTTTCCTTGAAAATTAGCCAGGTGTaGTGGGGTGCACTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: CGENLSHQIYIFLARFSLKISQV*WGALVV
Trigger: GACTACAAGTGCACCCCACCACACCTGGCTAATTTT...CAAGGAAAAACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CCA 90 bp GATTCCACGTCCCTGGCACACTCCAAGAGGGATTCAAGGTTAAAATACAACTTGTCCCCACAGTATGTTTaGTACCATCTGAATTCAAGG +
Preference number: 4 (lower is better)
Translates to: DSTSLAHSKRDSRLKYNLSPQYV*YHLNSR
Trigger: CCTTGAATTCAGATGGTACCAAACATACTGTGGGGA...CAAGTTGTATTTTAACCTTGAATCCCTCTTGGAGTGTGCCAGGGACGTGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CCA 90 bp TCATTAATTTCTCTAGGGCATATACCTAGAATTGCAATTGTCACAGCCTTGGGACCCATCCAAATAGTGTaGGGGTTGGCCTCGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SLISLGHIPRIAIVTALGPIQIV*GLASRF
Trigger: AAACCTCGAGGCCAACCCCCACACTATTTGGATGGG...TCCCAAGGCTGTGACAATTGCAATTCTAGGTATATGCCCTAGAGAAATTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CCA 90 bp GTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTGGCCCGTTTTTCCTTGGAGATCTACATTTTTCTaGCCCGTTTTTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VERTCLIRSTFFWPVFPWRSTFF*PVFPWH
Trigger: GTGCCAAGGAAAAACGGGCCAGAAAAATGTAGATCT...CCAAGGAAAAACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR GCA 90 bp TCAATACATCAGCCACTGTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTCCAAGAGTTCAAGGCTaGAGTGAGCTACAATCACGT +
Preference number: 4 (lower is better)
Translates to: SIHQPLWRELVSSDLHFSPRVQG*SELQSR
Trigger: ACGTGATTGTAGCTCACTGCAGCCTTGAACTCTTGG...AGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAGTGGCTGATGTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CCA 90 bp CGAATGCAGTGCGTGTCTGATCGTGAACATAGTATATTTATGGGCCCTTTCAGGAACATAGTATATTTATaGGCCCTTTCAGGTCTAAGG +
Preference number: 4 (lower is better)
Translates to: RMQCVSDREHSIFMGPFRNIVYL*ALSGLR
Trigger: CCTTAGACCTGAAAGGGCCCATAAATATACTATGTT...CCTGAAAGGGCCCATAAATATACTATGTTCACGATCAGACACGCACTGCATTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR TCA 90 bp AAATCTATTGGTTTATTTCAATACATCAGCCACTGTGGAGAGAACTTGTCTCATTGTTCTGAACTCACGTaGCCAAGATGTGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: KSIGLFQYISHCGENLSHCSELT*PRCDRG
Trigger: GCCTCTGTCACATCTTGGTCACGTGAGTTCAGAACA...ATGAGACAAGTTCTCTCCACAGTGGCTGATGTATTGAAATAAACCAATAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564550.1
3UTR CAA 72 bp GGTTTATTTCAATACATCAGCCACTGTGGAGAGAACTaGTCTCATCAGATCTACATTTTTCTGGCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: GLFQYISHCGEN*SHQIYIFLARF
Trigger: AAAACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAGTGGCTGATGTATTGAAATAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS GCA 90 bp GGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCTGCGGGACTCAGCTaGCCTCACACTCCGGGCAACGCTCGGTGGCAGTGGCGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: GRSPSAPLRSPAGLS*PHTPGNARWQWRPW
Trigger: CCACGGCCGCCACTGCCACCGAGCGTTGCCCGGAGTGTGAGGGCAGCTGAGTCCCGCAGGGCTGCGGAGGGGCGCGCTGGGGCTTCGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp GGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGCGTGCTCCGCCAGGTaGGAGCGGTGGCCGAAGCGA +
Preference number: 5 (lower is better)
Translates to: GQPGLPSPQFPRPGGRGEACSAR*ERWPKR
Trigger: TCGCTTCGGCCACCGCTCCAACCTGGCGGAGCACGC...CTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp GAGCCTGGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCTGCGCCAGGGGGCAGCTaGAAGTCCCTGCCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: EPGLVQPGRSPSAPLRSPAPGGS*KSLPQP
Trigger: CGGCTGCGGCAGGGACTTCAAGCTGCCCCCTGGCGC...AGGGCTGCGGAGGGGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS TCA 90 bp GGCAACGCTCGGTGGCAGTGGCGGCCGTGGCGCCAGGGGGCAGCTTaGAGTCCCTGCCGCAGCCGGCGCAAATATACAGGCGGCGCCGCA +
Preference number: 5 (lower is better)
Translates to: GNARWQWRPWRQGAA*SPCRSRRKYTGGAA
Trigger: TGCGGCGCCGCCTGTATATTTGCGCCGGCTGCGGCAGGGACTTCAAGCTGCCCCCTGGCGCCACGGCCGCCACTGCCACCGAGCGTTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp GGAGCCTGGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCGCGGCCGAGAAGCGTTaGTCGCACTCGGGGCACTCG +
Preference number: 5 (lower is better)
Translates to: GAWVSAARSKPQRAPPQPAAEKR*SHSGHS
Trigger: CGAGTGCCCCGAGTGCGACAAACGCTTCTCGGCCGC...GGGCTGCGGAGGGGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp GAGCCTGGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCTGCGGCGAGCTCAGACTaGGCGTCCTCCGCAGTCCCC +
Preference number: 5 (lower is better)
Translates to: EPGLVQPGRSPSAPLRSPAASSD*ASSAVP
Trigger: GGGGACTGCGGAGGACGCCAAGTCTGAGCTCGCCGC...AGGGCTGCGGAGGGGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434417.1
CDS CCA 90 bp CGCAGGGACGGCCGGTCATTGGTCCGAACATATAGCCCCACCCCCTaGGGCGGAGCCCGAAGGACCCAGGCGTCCGGCCCAAACGGCTCG +
Preference number: 5 (lower is better)
Translates to: RRDGRSLVRTYSPTP*GGARRTQASGPNGS
Trigger: CGAGCCGTTTGGGCCGGACGCCTGGGTCCTTCGGGCTCCGCCCCAGGGGGTGGGGCTATATGTTCGGACCAATGACCGGCCGTCCCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434417.1
CDS-3UTR CAA 90 bp TCCCTGTCTCCCAGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGGCGCCAGGGGGCAGCTaGAAGTCCCTGCCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: SLSPSSRAAGPAVPSISQAPGGS*KSLPQP
Trigger: CGGCTGCGGCAGGGACTTCAAGCTGCCCCCTGGCGC...CTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACTGGGAGACAGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp GGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGTGTTCGCCAGGCATCTaGGTGTCCAGCCGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: GQPGLPSPQFPRPGGRGECSPGI*VSSRRF
Trigger: GAACCTTCGGCTGGACACCAAGATGCCTGGCGAACA...CTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CAA 90 bp GGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGCCCGGGACCTCCTTGTaGTCCATGGGGATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: GQPGLPSPQFPRPGGRGEPGTSL*SMGILS
Trigger: ACTCAAGATCCCCATGGACAACAAGGAGGTCCCGGG...CTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp GAGCCTGGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCTTGCGTGCGGCCGTGTTaGGTCAGCGCCGACTTCTGT +
Preference number: 5 (lower is better)
Translates to: EPGLVQPGRSPSAPLRSPCVRPC*VSADFC
Trigger: ACAGAAGTCGGCGCTGACCAAACACGGCCGCACGCA...AGGGCTGCGGAGGGGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp GGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGCCGGGTTTCACCATGTaGGCCAGGCTGGTATCGAAC +
Preference number: 5 (lower is better)
Translates to: GSRACRPLNFPDPEAGARPGFTM*ARLVSN
Trigger: GTTCGATACCAGCCTGGCCAACATGGTGAAACCCGG...CCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CAA 90 bp GGAGCCTGGGTTAGTGCAGCCAGGTCGAAGCCCCAGCGCGCCCCTCCGCAGCCCAGGGACGGCCGGTCATaGGTCCGAACATATAGCCCC +
Preference number: 5 (lower is better)
Translates to: GAWVSAARSKPQRAPPQPRDGRS*VRTYSP
Trigger: GGGGCTATATGTTCGGACCAATGACCGGCCGTCCCT...GGGCTGCGGAGGGGCGCGCTGGGGCTTCGACCTGGCTGCACTAACCCAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434417.1
CDS-3UTR CAA 90 bp GCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGACCCGGGACCTCCTTGTaGTCCATGGGGATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: AGPAVPSISQTRRPGRGGPGTSL*SMGILS
Trigger: ACTCAAGATCCCCATGGACAACAAGGAGGTCCCGGG...TCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp TTCGAGCGTGGCTCGTGGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCGGCACGCTGCCGTTTCGCTTaGGCGCCCTCTGGCGCCCAT +
Preference number: 5 (lower is better)
Translates to: FERGSWVFREVAVQRWAARCRFA*APSGAH
Trigger: ATGGGCGCCAGAGGGCGCCAAAGCGAAACGGCAGCG...TGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACGCTCGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS GCA 90 bp AAGTCCCTGCCGCAGCCGGCGCAAATATACAGGCGGCGCCGCATGTaGGCGCGTCGGTGGCGAATGAAGTGCGAGCTTAGGCGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: KSLPQPAQIYRRRRM*ARRWRMKCELRRKR
Trigger: CCGCTTCCGCCTAAGCTCGCACTTCATTCGCCACCGACGCGCGCACATGCGGCGCCGCCTGTATATTTGCGCCGGCTGCGGCAGGGACTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp AGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGTCGCCCGGGACCTCCTaGTTGTCCATGGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: SSRAAGPAVPSISQTRRPSPGTS*LSMGIL
Trigger: CAAGATCCCCATGGACAACAAGGAGGTCCCGGGCGA...CGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp TCCCTGTCTCCCAGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGTGCGTGCGGCCGTGTTaGGTCAGCGCCGACTTCTGT +
Preference number: 5 (lower is better)
Translates to: SLSPSSRAAGPAVPSISQCVRPC*VSADFC
Trigger: ACAGAAGTCGGCGCTGACCAAACACGGCCGCACGCA...CTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACTGGGAGACAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp GCGCCCATAAACGAAGTGACGCGCCTGCGCTTCCCCCACCCTCTGCCCTTCGTCGCCTCCATGCTGAGTTaGCTGCGGAACGAGACTGGG +
Preference number: 5 (lower is better)
Translates to: APINEVTRLRFPHPLPFVASMLS*LRNETG
Trigger: CCCAGTCTCGTTCCGCAGCAAACTCAGCATGGAGGC...GACGAAGGGCAGAGGGTGGGGGAAGCGCAGGCGCGTCACTTCGTTTATGGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp GCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGATTGTCCATGGGGATCTaGAGTTTCACCACCTCATAC +
Preference number: 5 (lower is better)
Translates to: AGPAVPSISQTRRPGRGGLSMGI*SFTTSY
Trigger: GTATGAGGTGGTGAAACTCAAGATCCCCATGGACAA...TCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp GCCAAGTGTGCGATCACCTCCAACCAACACAAACCGAGGTGCCGGGAACCCCTTGCGGCCGAGAAGCGTTaGTCGCACTCGGGGCACTCG +
Preference number: 5 (lower is better)
Translates to: AKCAITSNQHKPRCREPLAAEKR*SHSGHS
Trigger: CGAGTGCCCCGAGTGCGACAAACGCTTCTCGGCCGC...AAGGGGTTCCCGGCACCTCGGTTTGTGTTGGTTGGAGGTGATCGCACACTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CAA 90 bp CCCAGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGTCCTTGACAACTCACTaGGCACCTGAGCCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: PSSRAAGPAVPSISQTRRSLTTH*APEPGE
Trigger: TTCTCCAGGCTCAGGTGCCAAGTGAGTTGTCAAGGA...CCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CAA 90 bp CAGCCCGGAGCCCACGCTCGAGGACATGTAAGCAGGCCTGGCCCAGCTCGGGGTGGCTCTTTGCTGTTGTaGGGATGCAGAGAGGACTCA +
Preference number: 5 (lower is better)
Translates to: QPGAHARGHVSRPGPARGGSLLL*GCREDS
Trigger: TGAGTCCTCTCTGCATCCCAACAACAGCAAAGAGCC...ACCCCGAGCTGGGCCAGGCCTGCTTACATGTCCTCGAGCGTGGGCTCCGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp GCTGCCGTTTCGCTTTGGCGCCCTCTGGCGCCCATAAACGAAGTGACGCGCCTGTGTTCGCCAGGCATCTaGGTGTCCAGCCGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: AAVSLWRPLAPINEVTRLCSPGI*VSSRRF
Trigger: GAACCTTCGGCTGGACACCAAGATGCCTGGCGAACA...CAGGCGCGTCACTTCGTTTATGGGCGCCAGAGGGCGCCAAAGCGAAACGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp CCCAGTTCCAGGGCAGCCGGGCCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGTTGTCCATGGGGATCTaGAGTTTCACCACCTCATAC +
Preference number: 5 (lower is better)
Translates to: PSSRAAGPAVPSISQTRRLSMGI*SFTTSY
Trigger: GTATGAGGTGGTGAAACTCAAGATCCCCATGGACAA...CCTCCGGGTCTGGGAAATTGAGGGGACGGCAGGCCCGGCTGCCCTGGAACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp CCTGCCGTCCCCTCAATTTCCCAGACCCGGAGGCCGGGGCGAGGAGGAGCCTGGGCTGATCTCAAACTCTaGACTTCAAGAGATCCTCCT +
Preference number: 5 (lower is better)
Translates to: PAVPSISQTRRPGRGGAWADLKL*TSRDPP
Trigger: AGGAGGATCTCTTGAAGTCAAGAGTTTGAGATCAGC...CCAGGCTCCTCCTCGCCCCGGCCTCCGGGTCTGGGAAATTGAGGGGACGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CAA 90 bp GCGCCCATAAACGAAGTGACGCGCCTGCGCTTCCCCCACCCTCTGCCCTTCGTCTCAGCCTCCTCCTTGTaGTCCATGGGGATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: APINEVTRLRFPHPLPFVSASSL*SMGILS
Trigger: ACTCAAGATCCCCATGGACAACAAGGAGGAGGCTGA...GACGAAGGGCAGAGGGTGGGGGAAGCGCAGGCGCGTCACTTCGTTTATGGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp GCGCTGGGGCCTACTGCCTCCCTTAGGACAGGGATGGGGCGACCTCCATCGTTTCACTCAGCCTCCTCCTaGTTGTCCATGGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: ALGPTASLRTGMGRPPSFHSASS*LSMGIL
Trigger: CAAGATCCCCATGGACAACAAGGAGGAGGCTGAGTG...AAACGATGGAGGTCGCCCCATCCCTGTCCTAAGGGAGGCAGTAGGCCCCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp CGTGGCTCGTGGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCGGCATGTCTGCTAGGCTCTTTGCTGTaGTTGGGATGCAGAGAGGAC +
Preference number: 5 (lower is better)
Translates to: RGSWVFREVAVQRWAACLLGSLL*LGCRED
Trigger: GTCCTCTCTGCATCCCAACAACAGCAAAGAGCCTAG...CAGACATGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS GCA 90 bp TCACCCTCATCCTCCTCACCCTTCACCAGCAGCACCATCTCCTCCTaGATCTCTTCCTCCTCCTCTTCCTCTGCCTGCTGTTCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: SPSSSSPFTSSTISS*ISSSSSSSACCSPG
Trigger: GCCTGGCGAACAGCAGGCAGAGGAAGAGGAGGAGGAAGAGATGCAGGAGGAGATGGTGCTGCTGGTGAAGGGTGAGGAGGATGAGGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319296.10
ENST00000434417.1
ENST00000564550.1
ENST00000566625.2
CDS-3UTR CAA 90 bp GCCAAGTGTGCGATCACCTCCAACCAACACAAACCGAGGTGCCGGGAACCCCTTTCGCCCGGGACCTCCTaGTTGTCCATGGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: AKCAITSNQHKPRCREPLSPGTS*LSMGIL
Trigger: CAAGATCCCCATGGACAACAAGGAGGTCCCGGGCGA...AAGGGGTTCCCGGCACCTCGGTTTGTGTTGGTTGGAGGTGATCGCACACTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CAA 90 bp AGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCTTACTCCGCTCTTCCCTGAGGCAAGGGAAATaGGGTGGTGCCTCCGAGTGG +
Preference number: 5 (lower is better)
Translates to: SDGGELKSYCRLILLRSSLRQGK*GGASEW
Trigger: CCACTCGGAGGCACCACCCAATTTCCCTTGCCTCAG...GGAAGAGCGGAGTAAGATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp AGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCTTACTCCGCTCTTCCCCTTTCTCCCGCGTTTaGGGGAGGGTTCCTCCACGT +
Preference number: 5 (lower is better)
Translates to: SDGGELKSYCRLILLRSSPFSRV*GRVPPR
Trigger: ACGTGGAGGAACCCTCCCCAAAACGCGGGAGAAAGG...GGAAGAGCGGAGTAAGATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp TGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCCGAGTGCAAATAGTGTGGGGGTaGGCCTCGAGGTTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: WAQRCTPEAREIGWCLRVQIVWG*ASRFLN
Trigger: GTTGAGAAACCTCGAGGCCAACCCCCACACTATTTG...CACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp CAGCCCGGAGCCCACGCTCGAGGACATGTAAGCAGGCCTGGCCCAGCTCGGGGTGGCATATACCTAGAATaGCAATTGTCACAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: QPGAHARGHVSRPGPARGGIYLE*QLSQPW
Trigger: CCAAGGCTGTGACAATTGCAATTCTAGGTATATGCC...ACCCCGAGCTGGGCCAGGCCTGCTTACATGTCCTCGAGCGTGGGCTCCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS GCA 90 bp AGGCTCTTTGCTGTTGTTGGGATGCAGAGAGGACTCACGGGTCCCTaGCCTCTAGGGGCACTCAGCCTCCTCCTTGTTGTCCATGGGGAT +
Preference number: 5 (lower is better)
Translates to: RLFAVVGMQRGLTGP*PLGALSLLLVVHGD
Trigger: ATCCCCATGGACAACAAGGAGGAGGCTGAGTGCCCCTAGAGGGCAGGGACCCGTGAGTCCTCTCTGCATCCCAACAACAGCAAAGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp GGAGGGTTCCTCCACGTGGTCGGGAAGCGGGCTGGCAGCGGGGCTCGGGTCCTGATAATGAAGAGGGTTTaGTTAGTTTTGGCGAGATGT +
Preference number: 5 (lower is better)
Translates to: GGFLHVVGKRAGSGARVLIMKRV*LVLARC
Trigger: ACATCTCGCCAAAACTAACAAAACCCTCTTCATTAT...CAGGACCCGAGCCCCGCTGCCAGCCCGCTTCCCGACCACGTGGAGGAACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp TGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCCGAGTGCTTCCCCAGGTCGAATaGGTACCTCTACCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: WAQRCTPEAREIGWCLRVLPQVE*VPLPLD
Trigger: GTCTAAAGGTAGAGGTACCAATTCGACCTGGGGAAG...CACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp TTCGAGCGTGGCTCGTGGGTTTTCCGTGAAGTCGCGGTGCAGCGGTGGGCGGCAGGGAGACGTTATTTTTaGCTGGAGGAGGTCAAGAAA +
Preference number: 5 (lower is better)
Translates to: FERGSWVFREVAVQRWAAGRRYF*LEEVKK
Trigger: TTTCTTGACCTCCTCCAGCAAAAAATAACGTCTCCC...TGCCGCCCACCGCTGCACCGCGACTTCACGGAAAACCCACGAGCCACGCTCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp GAGTTTGCTGCGGAACGAGACTGGGAACAGTTCCATCAGCCTCGGAATCTCCTCTCAGGGCAATGTACGTaGCGCTGGGGCCTACTGCCT +
Preference number: 5 (lower is better)
Translates to: EFAAERDWEQFHQPRNLLSGQCT*RWGLLP
Trigger: AGGCAGTAGGCCCCAGCGCAACGTACATTGCCCTGA...GAGGAGATTCCGAGGCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGCAAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp GAGAAAGCTGAGGCTGAGGGCGATGAAATTCACATGGCCAGTGGGAGCCAGGATCCAGGAGAAGGGGCCTaGGATGCCCGAGGAAAAATC +
Preference number: 5 (lower is better)
Translates to: EKAEAEGDEIHMASGSQDPGEGA*DARGKI
Trigger: GATTTTTCCTCGGGCATCCAAGGCCCCTTCTCCTGG...ATCCTGGCTCCCACTGGCCATGTGAATTTCATCGCCCTCAGCCTCAGCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CAA 90 bp GGATATAATACTTTATTCACTAACACGGGCCGAGGGAATGTAGTGATGTGGGGTGCGTGCTCCGCCAGGTaGGAGCGGTGGCCGAAGCGA +
Preference number: 5 (lower is better)
Translates to: GYNTLFTNTGRGNVVMWGACSAR*ERWPKR
Trigger: TCGCTTCGGCCACCGCTCCAACCTGGCGGAGCACGC...ACCCCACATCACTACATTCCCTCGGCCCGTGTTAGTGAATAAAGTATTATATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS-3UTR CAA 90 bp TGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCCGAGTGGAGGGGAGCATTTATTaGGTCTTCAAACATTCATGG +
Preference number: 5 (lower is better)
Translates to: WAQRCTPEAREIGWCLRVEGSIY*VFKHSW
Trigger: CCATGAATGTTTGAAGACCAAATAAATGCTCCCCTC...CACTCGGAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp GACACAGGGCCTAGCGGAAGAATTCCAGGGCCTAAGACTAGAAACGCGCGCTTGTGGACTTACACTCCTTaGTCCTATTTCAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: DTGPSGRIPGPKTRNARLWTYTP*SYFSRR
Trigger: GCGGCGGCTGAAATAGGACAAAGGAGTGTAAGTCCA...CAAGCGCGCGTTTCTAGTCTTAGGCCCTGGAATTCTTCCGCTAGGCCCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp GCAAAATGGGCGCAGCGGTGCACACCTGAGGCAAGGGAAATTGGGTGGTGCCTCAAGAGAAATTGCATTTaGATGTGCGGCGATTCCAGG +
Preference number: 5 (lower is better)
Translates to: AKWAQRCTPEAREIGWCLKRNCI*MCGDSR
Trigger: CCTGGAATCGCCGCACATCAAAATGCAATTTCTCTT...GAGGCACCACCCAATTTCCCTTGCCTCAGGTGTGCACCGCTGCGCCCATTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp GAGTTTGCTGCGGAACGAGACTGGGAACAGTTCCATCAGCCTCGGAATCTCCTCACTAGAAACGCGCGCTaGAAGCTCCCTCAGATTGGT +
Preference number: 5 (lower is better)
Translates to: EFAAERDWEQFHQPRNLLTRNAR*KLPQIG
Trigger: ACCAATCTGAGGGAGCTTCAAGCGCGCGTTTCTAGT...GAGGAGATTCCGAGGCTGATGGAACTGTTCCCAGTCTCGTTCCGCAGCAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp AGATGTGACAGAGGCTGGATTCCACGTCCCTGGCACACTCCAAGAGGGATTCAATCGTGTCTCTCCTTGTaGTCCATGGGGATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: RCDRGWIPRPWHTPRGIQSCLSL*SMGILS
Trigger: ACTCAAGATCCCCATGGACAACAAGGAGAGACACGA...TTGAATCCCTCTTGGAGTGTGCCAGGGACGTGGAATCCAGCCTCTGTCACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CAA 90 bp GTAAGAGGAGCTGAATCCAGCTCATTAAGATCCTCCTCTGCCCCAGTGTCCCGATTGTCCATGGGGATCTaGAGTTTCACCACCTCATAC +
Preference number: 5 (lower is better)
Translates to: VRGAESSSLRSSSAPVSRLSMGI*SFTTSY
Trigger: GTATGAGGTGGTGAAACTCAAGATCCCCATGGACAA...TCGGGACACTGGGGCAGAGGAGGATCTTAATGAGCTGGATTCAGCTCCTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CAA 90 bp GAGAAAGCTGAGGCTGAGGGCGATGAAATTCACATGGCCAGTGGGAGCCAGGATTGGGTGTTCTCTCTTTaGATAGCTGAGAAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: EKAEAEGDEIHMASGSQDWVFSL*IAEKAE
Trigger: CTCAGCTTTCTCAGCTATCAAAAGAGAGAACACCCA...ATCCTGGCTCCCACTGGCCATGTGAATTTCATCGCCCTCAGCCTCAGCTTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CAA 90 bp TCAACCACAGGACACAGCGATGGCGGGGAGCTGAAGTCCTACTGCCGTCTGATCTACCTAGAATTGCAATaGTCACAGCCTTGGGATTTT +
Preference number: 5 (lower is better)
Translates to: STTGHSDGGELKSYCRLIYLELQ*SQPWDF
Trigger: AAAATCCCAAGGCTGTGACAATTGCAATTCTAGGTA...GATCAGACGGCAGTAGGACTTCAGCTCCCCGCCATCGCTGTGTCCTGTGGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp GAGAAAGCTGAGGCTGAGGGCGATGAAATTCACATGGCCAGTGGGAGCCAGGATCACTGTGGAGAGAACTaGTCTCATCAGATCTACATT +
Preference number: 5 (lower is better)
Translates to: EKAEAEGDEIHMASGSQDHCGEN*SHQIYI
Trigger: AATGTAGATCTGATGAGACAAGTTCTCTCCACAGTG...ATCCTGGCTCCCACTGGCCATGTGAATTTCATCGCCCTCAGCCTCAGCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CAA 90 bp ATCAGCCACTGTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTGGCCCGTAGGAAGGAGGATTACTaGAGGCCAGGAGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: ISHCGENLSHQIYIFLARRKEDY*RPGVGH
Trigger: GTGTCCAACTCCTGGCCTCAAGTAATCCTCCTTCCT...ACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAGTGGCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CAA 90 bp GGATATAATACTTTATTCACTAACACGGGCCGAGGGAATGTAGTGATGTGGGGTTCCCCATTTGGTTCCTaGACAACTCACTTGGCACCT +
Preference number: 5 (lower is better)
Translates to: GYNTLFTNTGRGNVVMWGSPFGS*TTHLAP
Trigger: AGGTGCCAAGTGAGTTGTCAAGGAACCAAATGGGGA...ACCCCACATCACTACATTCCCTCGGCCCGTGTTAGTGAATAAAGTATTATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319296.10
CDS-3UTR CAA 90 bp GTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTGGCCCGTTTTTCCTTGGAGATCGTGTCTCTCCTaGTTGTCCATGGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: VERTCLIRSTFFWPVFPWRSCLS*LSMGIL
Trigger: CAAGATCCCCATGGACAACAAGGAGAGACACGATCT...CCAAGGAAAAACGGGCCAGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS-3UTR CAA 90 bp TCATTAATTTCTCTAGGGCATATACCTAGAATTGCAATTGTCACAGCCTTGGGAACTCCACAAAAGTCATaGGTCTCTTTCCTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SLISLGHIPRIAIVTALGTPQKS*VSFLRL
Trigger: GAGCCTGAGGAAAGAGACCAATGACTTTTGTGGAGT...TCCCAAGGCTGTGACAATTGCAATTCTAGGTATATGCCCTAGAGAAATTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS-3UTR CAA 90 bp TCAATACATCAGCCACTGTGGAGAGAACTTGTCTCATCAGATCTACATTTTTCTCTCCCCACAGTATGTTaGGTACCATCTGAATTCAAG +
Preference number: 5 (lower is better)
Translates to: SIHQPLWRELVSSDLHFSLPTVC*VPSEFK
Trigger: CTTGAATTCAGATGGTACCAAACATACTGTGGGGAG...AGAAAAATGTAGATCTGATGAGACAAGTTCTCTCCACAGTGGCTGATGTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS CAA 90 bp GGGCAACGCTCGGTGGCAGTGGCGGCCGTGGCGCCAGGGGGCAGCTaGAAGTCCCTGCCGCAGCCGGCGCAAATATACAGGCGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: GQRSVAVAAVAPGGS*KSLPQPAQIYRRRR
Trigger: GCGGCGCCGCCTGTATATTTGCGCCGGCTGCGGCAGGGACTTCAAGCTGCCCCCTGGCGCCACGGCCGCCACTGCCACCGAGCGTTGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS TCA 72 bp CGGTGGCAGTGGCGGCCGTGGCGCCAGGGGGCAGCTTaGAGTCCCTGCCGCAGCCGGCGCAAATATACAGGC +
Preference number: 6 (lower is better)
Translates to: RWQWRPWRQGAA*SPCRSRRKYTG
Trigger: GCCTGTATATTTGCGCCGGCTGCGGCAGGGACTTCAAGCTGCCCCCTGGCGCCACGGCCGCCACTGCCACCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS CCA 72 bp GGCCGGTCATTGGTCCGAACATATAGCCCCACCCCCTaGGGCGGAGCCCGAAGGACCCAGGCGTCCGGCCCA +
Preference number: 6 (lower is better)
Translates to: GRSLVRTYSPTP*GGARRTQASGP
Trigger: TGGGCCGGACGCCTGGGTCCTTCGGGCTCCGCCCCAGGGGGTGGGGCTATATGTTCGGACCAATGACCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434417.1
CDS CAA 72 bp GGCCCAAACGGCTCGGAGAGGGCGGCGAGCTCAGACTaGGCGTCCTCCGCAGTCCCCCGACTCCCAAGCACC +
Preference number: 6 (lower is better)
Translates to: GPNGSERAASSD*ASSAVPRLPST
Trigger: GGTGCTTGGGAGTCGGGGGACTGCGGAGGACGCCAAGTCTGAGCTCGCCGCCCTCTCCGAGCCGTTTGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434417.1
CDS CCA 72 bp GCCCAAACGGCTCGGAGAGGGCGGCGAGCTCAGACTTaGCGTCCTCCGCAGTCCCCCGACTCCCAAGCACCT +
Preference number: 6 (lower is better)
Translates to: AQTARRGRRAQT*RPPQSPDSQAP
Trigger: AGGTGCTTGGGAGTCGGGGGACTGCGGAGGACGCCAAGTCTGAGCTCGCCGCCCTCTCCGAGCCGTTTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434417.1
CDS CAA 72 bp TCGGTGGCAGTGGCGGCCGTGGCGCCAGGGGGCAGCTaGAAGTCCCTGCCGCAGCCGGCGCAAATATACAGG +
Preference number: 6 (lower is better)
Translates to: SVAVAAVAPGGS*KSLPQPAQIYR
Trigger: CCTGTATATTTGCGCCGGCTGCGGCAGGGACTTCAAGCTGCCCCCTGGCGCCACGGCCGCCACTGCCACCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS TCA 72 bp TCCTCTGCCTGCTGTTCGCCAGGCATCTTGGTGTCCTaGGGCGGGGAGCAGCCGAAGGTTCGGCACTCGCGG +
Preference number: 6 (lower is better)
Translates to: SSACCSPGILVS*GGEQPKVRHSR
Trigger: CCGCGAGTGCCGAACCTTCGGCTGCTCCCCGCCTCAGGACACCAAGATGCCTGGCGAACAGCAGGCAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434417.1
CDS GCA 72 bp CCGCAGCCGGCGCAAATATACAGGCGGCGCCGCATGTaGGCGCGTCGGTGGCGAATGAAGTGCGAGCTTAGG +
Preference number: 6 (lower is better)
Translates to: PQPAQIYRRRRM*ARRWRMKCELR
Trigger: CCTAAGCTCGCACTTCATTCGCCACCGACGCGCGCACATGCGGCGCCGCCTGTATATTTGCGCCGGCTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS CCA 72 bp CAAATATACAGGCGGCGCCGCATGTGCGCGCGTCGGTaGCGAATGAAGTGCGAGCTTAGGCGGAAGCGGCGG +
Preference number: 6 (lower is better)
Translates to: QIYRRRRMCARR*RMKCELRRKRR
Trigger: CCGCCGCTTCCGCCTAAGCTCGCACTTCATTCGCCACCGACGCGCGCACATGCGGCGCCGCCTGTATATTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS GCA 72 bp GCTGTTGTTGGGATGCAGAGAGGACTCACGGGTCCCTaGCCTCTAGGGGCACTCAGCCTCCTCCTTGTTGTC +
Preference number: 6 (lower is better)
Translates to: AVVGMQRGLTGP*PLGALSLLLVV
Trigger: GACAACAAGGAGGAGGCTGAGTGCCCCTAGAGGGCAGGGACCCGTGAGTCCTCTCTGCATCCCAACAACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS CAA 72 bp GCCTCGCCCGGGACCTCCTTGTTGTCCATGGGGATCTaGAGTTTCACCACCTCATACTTCTCCTCACCCTCA +
Preference number: 6 (lower is better)
Translates to: ASPGTSLLSMGI*SFTTSYFSSPS
Trigger: TGAGGGTGAGGAGAAGTATGAGGTGGTGAAACTCAAGATCCCCATGGACAACAAGGAGGTCCCGGGCGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS TCA 72 bp CCTCGCCCGGGACCTCCTTGTTGTCCATGGGGATCTTaGGTTTCACCACCTCATACTTCTCCTCACCCTCAT +
Preference number: 6 (lower is better)
Translates to: PRPGPPCCPWGS*VSPPHTSPHPH
Trigger: ATGAGGGTGAGGAGAAGTATGAGGTGGTGAAACTCAAGATCCCCATGGACAACAAGGAGGTCCCGGGCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319296.10
ENST00000434417.1
CDS CAA 72 bp GGGCACTCAGCCTCCTCCTTGTTGTCCATGGGGATCTaGAGTTTCACCACCTCATACTTCTCCTCACCCTCA +
Preference number: 6 (lower is better)
Translates to: GHSASSLLSMGI*SFTTSYFSSPS
Trigger: TGAGGGTGAGGAGAAGTATGAGGTGGTGAAACTCAAGATCCCCATGGACAACAAGGAGGAGGCTGAGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS TCA 72 bp GGCACTCAGCCTCCTCCTTGTTGTCCATGGGGATCTTaGGTTTCACCACCTCATACTTCTCCTCACCCTCAT +
Preference number: 6 (lower is better)
Translates to: GTQPPPCCPWGS*VSPPHTSPHPH
Trigger: ATGAGGGTGAGGAGAAGTATGAGGTGGTGAAACTCAAGATCCCCATGGACAACAAGGAGGAGGCTGAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566625.2
CDS CAA 72 bp GCGAGATCGTGTCTCTCCTTGTTGTCCATGGGGATCTaGAGTTTCACCACCTCATACTTCTCCTCACCCTCA +
Preference number: 6 (lower is better)
Translates to: ARSCLSLLSMGI*SFTTSYFSSPS
Trigger: TGAGGGTGAGGAGAAGTATGAGGTGGTGAAACTCAAGATCCCCATGGACAACAAGGAGAGACACGATCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564550.1
CDS TCA 72 bp CGAGATCGTGTCTCTCCTTGTTGTCCATGGGGATCTTaGGTTTCACCACCTCATACTTCTCCTCACCCTCAT +
Preference number: 6 (lower is better)
Translates to: RDRVSPCCPWGS*VSPPHTSPHPH
Trigger: ATGAGGGTGAGGAGAAGTATGAGGTGGTGAAACTCAAGATCCCCATGGACAACAAGGAGAGACACGATCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564550.1