Pregenerated sensors for ZNF77 (Homo sapiens)
Ensembl gene IDs: ENSG00000175691Ensembl transcript IDs: ENST00000314531.5, ENST00000588050.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATAAATAACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGCACGACAGGACACCTaGGCCGCTCGGGGTAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: INNVSHIYNKVLRLNTLPARQDT*AARGRR Trigger: CCGCCTACCCCGAGCGGCTCAGGTGTCCTGTCGTGC...TGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTTATTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR TCA 90 bp | TCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCACTGTATCAGAGTCTCCCCAGCTaGCTTCTCAGATGCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SHIYNKVLRLNTLPGPLYQSLPS*LLRCLC Trigger: ACAGAGGCATCTGAGAAGTCAGCTGGGGAGACTCTG...ATACAGTGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR TCA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCAGGTCTCTGTCCAGTGTaGGATCTCTGCCGATTCTCG | + |
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Preference number: 4 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPGLCPV*DLCRFS Trigger: CGAGAATCGGCAGAGATCTCACACTGGACAGAGACC...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR GCA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCAGTGTGCGTTCTCACGTaGACACGAAGGGACGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPVCVLT*TRRDEE Trigger: TTCCTCGTCCCTTCGTGTGCACGTGAGAACGCACAC...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR TCA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCACACAGATGCTGTCCTTaGGTCCTGGCAATTACAGGG | + |
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Preference number: 4 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPHRCCP*VLAITG Trigger: CCCTGTAATTGCCAGGACTCAAGGACAGCATCTGTG...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR TCA 90 bp | TCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCACTGTATGCGATGCGAGATACCTaGAGGTTTTCCCACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: SHIYNKVLRLNTLPGPLYAMRDT*RFSHTA Trigger: AGCAGTGTGGGAAAACCTTCAGGTATCTCGCATCGC...ATACAGTGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR GCA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCAGTGCATTCTCATGTGTaGTCGCAGAGAGGAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPVHSHV*SQRGGV Trigger: TACCCCTCCTCTCTGCGAGCACACATGAGAATGCAC...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR CCA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCAAGAAGGTTCGCAGTCTaGCTCAAGGTCTCTCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPRRFAV*LKVSPH Trigger: ATGCGGAGAGACCTTGAGCCAGACTGCGAACCTTCT...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR CCA 90 bp | TCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCACTGTATGTATGCGTCCTCACGTaGATTCGAAGGGAGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SHIYNKVLRLNTLPGPLYVCVLT*IRREEE Trigger: TTCCTCCTCCCTTCGAATCCACGTGAGGACGCATAC...ATACAGTGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR TCA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCAGTTCTCACATGTGCTTaGAGCGATGCGAGATACCTG | + |
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Preference number: 4 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPVLTCA*SDARYL Trigger: CAGGTATCTCGCATCGCTTCAAGCACATGTGAGAAC...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR CCA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCATCTCAGATGCCTCTGTaGGATTTGGTGCTGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPSQMPL*DLVLIS Trigger: GGAGATCAGCACCAAATCCCACAGAGGCATCTGAGA...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR TCA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCACCAAAAACGTCCCTCTaGGAACTTGATCCACTGGTT | + |
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Preference number: 4 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPPKTSL*ELDPLV Trigger: AACCAGTGGATCAAGTTCTCAGAGGGACGTTTTTGG...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR CCA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCAGCTGTCCTTGAGTCCTaGCAATTACAGGGTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPAVLES*QLQGFS Trigger: AGAGAAACCCTGTAATTGCCAGGACTCAAGGACAGC...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR TCA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCAGTCCCTCTGAGAACTTaGTCCACTGGTTCTAACATA | + |
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Preference number: 4 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPVPLRT*STGSNI Trigger: TATGTTAGAACCAGTGGATCAAGTTCTCAGAGGGAC...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR TCA 90 bp | TCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCACTGTATGAGACGAGTAACAAGTaGACGCTTTTCCGCAATGTT | + |
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Preference number: 4 (lower is better) Translates to: SHIYNKVLRLNTLPGPLYETSNK*TLFRNV Trigger: AACATTGCGGAAAAGCGTTCACTTGTTACTCGTCTC...ATACAGTGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR GCA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCAGGTTTCTCTACAGTCTaGGTTTTCATAGGAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPGFSTV*VFIGGL Trigger: AAGCCCTCCTATGAAAACGCAGACTGTAGAGAAACC...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR TCA 90 bp | ATAAATAACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAACAAGGTTTTACGGTTaGACACTCTCCCAGGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: INNVSHIYNKVLRLNTLPTRFYG*TLSQVH Trigger: GTGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGT...TGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTTATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR TCA 90 bp | TCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCACTGTATAGGAATCACTTCCTGTaGACTTTACAATCTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SHIYNKVLRLNTLPGPLYRNHFL*TLQSLH Trigger: ATGAAGAGATTGTAAAGTTCACAGGAAGTGATTCCT...ATACAGTGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR TCA 90 bp | ATAAATAACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAATGTCCCCTGAAAGATaGGGGACAAATGAAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: INNVSHIYNKVLRLNTLPMSPER*GTNESF Trigger: AAAGCTTTCATTTGTCCCTCATCTTTCAGGGGACAT...TGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTTATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR TCA 90 bp | ATAAATAACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAAGGAGGAGTAACAGCTaGATGATTTTCCACAATGCT | + |
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Preference number: 4 (lower is better) Translates to: INNVSHIYNKVLRLNTLPRRSNS*MIFHNA Trigger: AGCATTGTGGAAAATCATTCAGCTGTTACTCCTCCT...TGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTTATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR TCA 90 bp | ATAAATAACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCATTTGACCCCACTGTGTaGTCTCACATGCTTTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: INNVSHIYNKVLRLNTLPFDPTV*SHMLLK Trigger: TTTCAAAAGCATGTGAGATCACACAGTGGGGTCAAA...TGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTTATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR GCA 90 bp | ATAAATAACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAATGTGCTTGAAGCGATaGGAGATACCTGAAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: INNVSHIYNKVLRLNTLPMCLKR*EIPEGF Trigger: AAAACCTTCAGGTATCTCGCATCGCTTCAAGCACAT...TGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTTATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR GCA 90 bp | ATAAATAACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAATGTGTTCTCACATGTaGTTGAAGCGATGCGAGATA | + |
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Preference number: 4 (lower is better) Translates to: INNVSHIYNKVLRLNTLPMCSHM*LKRCEI Trigger: TATCTCGCATCGCTTCAAGCACATGTGAGAACACAT...TGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTTATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS GCA 90 bp | TCATGCCTGCAATCCCAGTACTTTGAGAGGCTCAGGTGCGAGGATTaGTTAGGGCCAGGAGTTGGCGACCAGCCTGGGCTGCATAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SCLQSQYFERLRCED*LGPGVGDQPGLHSE Trigger: CTCACTATGCAGCCCAGGCTGGTCGCCAACTCCTGGCCCTAAGCAATCCTCGCACCTGAGCCTCTCAAAGTACTGGGATTGCAGGCATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588050.1 |
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| CDS TCA 90 bp | ACACTCAATGCCGTGAGTACCTTCCCAACAGGGAGCAAAGCGCAATaGCGGCCTCTGCCAGAGACTTACAAAGAATTACTGAGAAACGGC | + |
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Preference number: 5 (lower is better) Translates to: TLNAVSTFPTGSKAQ*RPLPETYKELLRNG Trigger: GCCGTTTCTCAGTAATTCTTTGTAAGTCTCTGGCAGAGGCCGTCATTGCGCTTTGCTCCCTGTTGGGAAGGTACTCACGGCATTGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588050.1 |
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| CDS GCA 90 bp | CTTGTGAGAGGTGACCAACAGTATGAAAAAGTGCAGTACACTCAATaGCGTGAGTACCTTCCCAACAGGGAGCAAAGCGCAATGACGGCC | + |
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Preference number: 5 (lower is better) Translates to: LVRGDQQYEKVQYTQ*REYLPNREQSAMTA Trigger: GGCCGTCATTGCGCTTTGCTCCCTGTTGGGAAGGTACTCACGGCATTGAGTGTACTGCACTTTTTCATACTGTTGGTCACCTCTCACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588050.1 |
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| CDS-3UTR CAA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCACGATTCTCGAAGGCTTaGCCACACTTAGTGCACTCA | + |
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Preference number: 5 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPRFSKA*PHLVHS Trigger: TGAGTGCACTAAGTGTGGCAAAGCCTTCGAGAATCG...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR CAA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCATCACAGATGCTGTCCTaGAGTCCTGGCAATTACAGG | + |
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Preference number: 5 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPSQMLS*SPGNYR Trigger: CCTGTAATTGCCAGGACTCAAGGACAGCATCTGTGA...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR CAA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCATGTTCTCACATGTGCTaGAAGCGATGCGAGATACCT | + |
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Preference number: 5 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPCSHMC*KRCEIP Trigger: AGGTATCTCGCATCGCTTCAAGCACATGTGAGAACA...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR CAA 90 bp | AACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAGGTCCAAACAAGGTTTTACGGTaGAACACTCTCCCAGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: NVSHIYNKVLRLNTLPGPNKVLR*NTLPGP Trigger: TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTT...TGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR CAA 90 bp | ATAAATAACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCAATGCCTCTGTGGGATTaGGTGCTGATCTCCAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: INNVSHIYNKVLRLNTLPMPLWD*VLISSV Trigger: AACACTGGAGATCAGCACCAAATCCCACAGAGGCAT...TGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTTATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS TCA 90 bp | TTCATCATTGGATATTCCATTCCCAAAAACGTCCCTCTGAGAACTTaGTCCACTGGTTCTAACATAAATGTAACAATCCAAGGAGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: FIIGYSIPKNVPLRT*STGSNINVTIQGGK Trigger: CTTGCCTCCTTGGATTGTTACATTTATGTTAGAACCAGTGGATCAAGTTCTCAGAGGGACGTTTTTGGGAATGGAATATCCAATGATGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS-3UTR CAA 90 bp | ATAAATAACGTTTCTCACATTTACAACAAGGTTTTACGGTTGAACACTCTCCCACAAGGTCTCTCCGCATaGATGACCTTCATTACTTTC | + |
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Preference number: 5 (lower is better) Translates to: INNVSHIYNKVLRLNTLPQGLSA*MTFITF Trigger: GAAAGTAATGAAGGTCATCAATGCGGAGAGACCTTG...TGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTTATTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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| CDS GCA 72 bp | CAATCCCAGTACTTTGAGAGGCTCAGGTGCGAGGATTaGTTAGGGCCAGGAGTTGGCGACCAGCCTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: QSQYFERLRCED*LGPGVGDQPGL Trigger: CAGCCCAGGCTGGTCGCCAACTCCTGGCCCTAAGCAATCCTCGCACCTGAGCCTCTCAAAGTACTGGGATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588050.1 |
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| CDS TCA 72 bp | GCCGTGAGTACCTTCCCAACAGGGAGCAAAGCGCAATaGCGGCCTCTGCCAGAGACTTACAAAGAATTACTG | + |
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Preference number: 6 (lower is better) Translates to: AVSTFPTGSKAQ*RPLPETYKELL Trigger: CAGTAATTCTTTGTAAGTCTCTGGCAGAGGCCGTCATTGCGCTTTGCTCCCTGTTGGGAAGGTACTCACGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588050.1 |
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| CDS GCA 72 bp | GGTGACCAACAGTATGAAAAAGTGCAGTACACTCAATaGCGTGAGTACCTTCCCAACAGGGAGCAAAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: GDQQYEKVQYTQ*REYLPNREQSA Trigger: TGCGCTTTGCTCCCTGTTGGGAAGGTACTCACGGCATTGAGTGTACTGCACTTTTTCATACTGTTGGTCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588050.1 |
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| CDS TCA 72 bp | CCTGGGGAACTGAGCCACACAGAGCTTATGTCCTTGTaGGAGGTGACCAACAGTATGAAAAAGTGCAGTACA | + |
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Preference number: 6 (lower is better) Translates to: PGELSHTELMSL*EVTNSMKKCST Trigger: TGTACTGCACTTTTTCATACTGTTGGTCACCTCTCACAAGGACATAAGCTCTGTGTGGCTCAGTTCCCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588050.1 |
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| CDS TCA 72 bp | ATAACGTTTCTCACATTTACAACAAGGTTTTACGGTTaGACACTCTCCCAGGTCCACTGTATTCGTAGATTC | + |
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Preference number: 6 (lower is better) Translates to: ITFLTFTTRFYG*TLSQVHCIRRF Trigger: GAATCTACGAATACAGTGGACCTGGGAGAGTGTTCAACCGTAAAACCTTGTTGTAAATGTGAGAAACGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314531.5 |
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