RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF76 (Homo sapiens)

Ensembl gene IDs: ENSG00000065029

Ensembl transcript IDs: ENST00000229405.8, ENST00000339411.5, ENST00000373953.8, ENST00000460229.1, ENST00000469195.5, ENST00000479226.1, ENST00000482946.1, ENST00000484932.5, ENST00000486891.5, ENST00000491400.5, ENST00000498555.1

Found 649 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGGTCGGCATCAGGACTGGGGATGGTGAGGGTGGTGCTGCCGTaGTGGGTGACCATACTGATGGCACTCCCCAGGGCCTGCAGGTCT +
Preference number: 1 (lower is better)
Translates to: ARSASGLGMVRVVLP*WVTILMALPRACRS
Trigger: AGACCTGCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACGGCAGCACCACCCTCACCATCCCCAGTCCTGATGCCGACCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR TCA 90 bp GGGCTGTGTGGATGCGCACGTGATTCTTATAGTTGGTGGCGCTGGTaGAGCCGCGGCCACAGTGGGGCTCCGGGCAGGTGTAGGGCCTCT +
Preference number: 1 (lower is better)
Translates to: GLCGCARDSYSWWRW*SRGHSGAPGRCRAS
Trigger: AGAGGCCCTACACCTGCCCGGAGCCCCACTGTGGCCGCGGCTTCACCAGCGCCACCAACTATAAGAATCACGTGCGCATCCACACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 90 bp TGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTaGTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACCCT +
Preference number: 1 (lower is better)
Translates to: WPPGRWLLLGGQDRA*STATGLKSCLWLNP
Trigger: AGGGTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR CCA 90 bp CACCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTaGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCAGC +
Preference number: 1 (lower is better)
Translates to: HLLCVSHSLGPWGQE*PCRWHFLQHGVGPS
Trigger: GCTGGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR CCA 90 bp GTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTaGGCTGAAGAGCTGTCTGTGGCTCAACCCTACAGGGCCAGTCCC +
Preference number: 1 (lower is better)
Translates to: VVIAGRAGQGLLHCY*AEELSVAQPYRASP
Trigger: GGGACTGGCCCTGTAGGGTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR GCA 90 bp GCATGGCCAAGGTGGAGGTCTGCCGGTAGGTCTTGCCGCAGGTGCTaGAGGTGTAGGGCTTGCAGTGTGTGTGCACCACGTGGTGCTTAT +
Preference number: 1 (lower is better)
Translates to: AWPRWRSAGRSCRRC*RCRACSVCAPRGAY
Trigger: ATAAGCACCACGTGGTGCACACACACTGCAAGCCCTACACCTGCAGCACCTGCGGCAAGACCTACCGGCAGACCTCCACCTTGGCCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 90 bp CAGCCACTCTCCGACACTGTTGTCTCCAGGGTCACAGCCCCTTGCTaGATGGCCGCAGTGGCCACATTGATGGCCTCCTCTAAGGTCTGC +
Preference number: 1 (lower is better)
Translates to: QPLSDTVVSRVTAPC*MAAVATLMASSKVC
Trigger: GCAGACCTTAGAGGAGGCCATCAATGTGGCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCTGGAGACAACAGTGTCGGAGAGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 90 bp CAGCAGCCACTCTCCGACACTGTTGTCTCCAGGGTCACAGCCCCTTaGTGCATGGCCGCAGTGGCCACATTGATGGCCTCCTCTAAGGTC +
Preference number: 1 (lower is better)
Translates to: QQPLSDTVVSRVTAP*CMAAVATLMASSKV
Trigger: GACCTTAGAGGAGGCCATCAATGTGGCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCTGGAGACAACAGTGTCGGAGAGTGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 90 bp CTCATCCTCCACCGTCCACCTCATGCACAGGCTCTCCACCTCCTTTaGCTCAAGAAGCCCATGTCTGCCTCTATCCCACCCCTGCCCTGG +
Preference number: 1 (lower is better)
Translates to: LILHRPPHAQALHLL*LKKPMSASIPPLPW
Trigger: CCAGGGCAGGGGTGGGATAGAGGCAGACATGGGCTTCTTGAGCCAAAGGAGGTGGAGAGCCTGTGCATGAGGTGGACGGTGGAGGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 90 bp CTCTTCCTTCACCTCCGAAAGGTAAGCTATCCGGGGTCGTTTGGGTaGCGGACTCTCCTCGGCTGCAGAGGCGGCCTCAAGTTGCTGCTG +
Preference number: 1 (lower is better)
Translates to: LFLHLRKVSYPGSFG*RTLLGCRGGLKLLL
Trigger: CAGCAGCAACTTGAGGCCGCCTCTGCAGCCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGCTTACCTTTCGGAGGTGAAGGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR TCA 90 bp GAGGCTGGGTCTCTCCACCAACCCTCCAGGCTCCTTCTGCTGGCCTaGACCATGCTGCCTTGCACTCCCGTAACAAGGTTTCCTCCAGAG +
Preference number: 1 (lower is better)
Translates to: EAGSLHQPSRLLLLA*TMLPCTPVTRFPPE
Trigger: CTCTGGAGGAAACCTTGTTACGGGAGTGCAAGGCAGCATGGTTCAGGCCAGCAGAAGGAGCCTGGAGGGTTGGTGGAGAGACCCAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR TCA 90 bp GTGGCTCTTCAGTCCATAGCCTGTCCATATGTGGCAGGCAGGGGGTaGGATGAGCACCCAGTGGGGTCTCATCCTCCACCGTCCACCTCA +
Preference number: 1 (lower is better)
Translates to: VALQSIACPYVAGRG*DEHPVGSHPPPSTS
Trigger: TGAGGTGGACGGTGGAGGATGAGACCCCACTGGGTGCTCATCTCACCCCCTGCCTGCCACATATGGACAGGCTATGGACTGAAGAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR TCA 90 bp TCTTCAGTCCATAGCCTGTCCATATGTGGCAGGCAGGGGGTGAGATaGGCACCCAGTGGGGTCTCATCCTCCACCGTCCACCTCATGCAC +
Preference number: 1 (lower is better)
Translates to: SSVHSLSICGRQGVR*APSGVSSSTVHLMH
Trigger: GTGCATGAGGTGGACGGTGGAGGATGAGACCCCACTGGGTGCTCATCTCACCCCCTGCCTGCCACATATGGACAGGCTATGGACTGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 90 bp TGGCCGTGGGATCCCCTTTCCTCCCAGATCTCTACTCACCTGCACTaGAATGTGCGTTCCGTTGGCTGTGGCCAACAGTGCCACCTGTTG +
Preference number: 1 (lower is better)
Translates to: WPWDPLSSQISTHLH*NVRSVGCGQQCHLL
Trigger: CAACAGGTGGCACTGTTGGCCACAGCCAACGGAACGCACATTGCAGTGCAGGTGAGTAGAGATCTGGGAGGAAAGGGGATCCCACGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 90 bp TTCTCTGGCCGTGGGATCCCCTTTCCTCCCAGATCTCTACTCACCTaGACTGCAATGTGCGTTCCGTTGGCTGTGGCCAACAGTGCCACC +
Preference number: 1 (lower is better)
Translates to: FSGRGIPFPPRSLLT*TAMCVPLAVANSAT
Trigger: GGTGGCACTGTTGGCCACAGCCAACGGAACGCACATTGCAGTGCAGGTGAGTAGAGATCTGGGAGGAAAGGGGATCCCACGGCCAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 90 bp TTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCGGGTaGCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGAGGATGATGCA +
Preference number: 1 (lower is better)
Translates to: FFRRRVGAQLILRGG*PGVAWLLSAPEDDA
Trigger: TGCATCATCCTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR CCA 90 bp TCACGGATGAAGAGTCCTATTAGGCTAGGCATGGCCAGGGGGCCCTaGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAAGG +
Preference number: 1 (lower is better)
Translates to: SRMKSPIRLGMARGP*NSQGQRDPLAHGGR
Trigger: CCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGCCATGCCTAGCCTAATAGGACTCTTCATCCGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 90 bp CCTTCAGAGAGGTCCCAAACAGAACGAGAACCCTCCACCCTCAACTaGAAGCAGCCCACCAGGCAGGTTACCTGTGGCAAAGGCCTTTCC +
Preference number: 1 (lower is better)
Translates to: PSERSQTEREPSTLN*KQPTRQVTCGKGLS
Trigger: GGAAAGGCCTTTGCCACAGGTAACCTGCCTGGTGGGCTGCTTCCAGTTGAGGGTGGAGGGTTCTCGTTCTGTTTGGGACCTCTCTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 90 bp AGCGGTGGTGTAGAGACGCCCACAGCCCTTGTAGCCACAGCGGAATaGTCTGTCTCCAACTTGCTGCCCTTTTCCATTACGGGGAATCTG +
Preference number: 1 (lower is better)
Translates to: SGGVETPTALVATAE*SVSNLLPFSITGNL
Trigger: CAGATTCCCCGTAATGGAAAAGGGCAGCAAGTTGGAGACAGAGCATTCCGCTGTGGCTACAAGGGCTGTGGGCGTCTCTACACCACCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR TCA 90 bp CACCAGTGTGGGTACGGACATGCTTCTGCAGGTCTCCTGAGGTCTTaGAGGCCTTGCTGCACAGCTCCTCTGGGCACTTGTATGGTTTCT +
Preference number: 1 (lower is better)
Translates to: HQCGYGHASAGLLRS*RPCCTAPLGTCMVS
Trigger: AGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGCAAGGCCTTCAAGACCTCAGGAGACCTGCAGAAGCATGTCCGTACCCACACTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR TCA 90 bp AGTGTGTGTGCACCACGTGGTGCTTATACAAGCTCGAGTACTCGGTaGAGCGTTTCCCGCAGCCTGGCACCGTGCAAACGTATGGCTTCT +
Preference number: 1 (lower is better)
Translates to: SVCAPRGAYTSSSTR*SVSRSLAPCKRMAS
Trigger: AGAAGCCATACGTTTGCACGGTGCCAGGCTGCGGGAAACGCTTCACCGAGTACTCGAGCTTGTATAAGCACCACGTGGTGCACACACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 90 bp CCCATGGAAAGGAATGACAAAATAAGAAACCCCAAGCAAACCGCCTaGTCATACGGGCTGCGTCTGGGTGCCATCGGCGCTGACCATGGT +
Preference number: 1 (lower is better)
Translates to: PMERNDKIRNPKQTA*SYGLRLGAIGADHG
Trigger: ACCATGGTCAGCGCCGATGGCACCCAGACGCAGCCCGTATGACCAGGCGGTTTGCTTGGGGTTTCTTATTTTGTCATTCCTTTCCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR TCA 90 bp TGTGGCCAACAGTGCCACCTGTTGATGACGAAGAGATGCTACACTTaGGTCCTCAGCCACCACAGCCCCAGAGGTAATGATTGTGACCTG +
Preference number: 1 (lower is better)
Translates to: CGQQCHLLMTKRCYT*VLSHHSPRGNDCDL
Trigger: CAGGTCACAATCATTACCTCTGGGGCTGTGGTGGCTGAGGACTCAAGTGTAGCATCTCTTCGTCATCAACAGGTGGCACTGTTGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 90 bp TCAGAGTACTCTGACGGTAGTTTCTCCAGGAAAGCAGCCTGGTGTTaGGTTCCCTTCAGAGAGGTCCCAAACAGAACGAGAACCCTCCAC +
Preference number: 1 (lower is better)
Translates to: SEYSDGSFSRKAAWC*VPFREVPNRTRTLH
Trigger: GTGGAGGGTTCTCGTTCTGTTTGGGACCTCTCTGAAGGGAACCCAACACCAGGCTGCTTTCCTGGAGAAACTACCGTCAGAGTACTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 90 bp CCAGATCTCTACTCACCTGCACTGCAATGTGCGTTCCGTTGGCTGTaGCCAACAGTGCCACCTGTTGATGACGAAGAGATGCTACACTTG +
Preference number: 1 (lower is better)
Translates to: PDLYSPALQCAFRWL*PTVPPVDDEEMLHL
Trigger: CAAGTGTAGCATCTCTTCGTCATCAACAGGTGGCACTGTTGGCCACAGCCAACGGAACGCACATTGCAGTGCAGGTGAGTAGAGATCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 90 bp TTCCTCCCAGATCTCTACTCACCTGCACTGCAATGTGCGTTCCGTTaGCTGTGGCCAACAGTGCCACCTGTTGATGACGAAGAGATGCTA +
Preference number: 1 (lower is better)
Translates to: FLPDLYSPALQCAFR*LWPTVPPVDDEEML
Trigger: TAGCATCTCTTCGTCATCAACAGGTGGCACTGTTGGCCACAGCCAACGGAACGCACATTGCAGTGCAGGTGAGTAGAGATCTGGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 90 bp TGCAAGTCAGAGTACTCTGACGGTAGTTTCTCCAGGAAAGCAGCCTaGTGTTGGGTTCCCTTCAGAGAGGTCCCAAACAGAACGAGAACC +
Preference number: 1 (lower is better)
Translates to: CKSEYSDGSFSRKAA*CWVPFREVPNRTRT
Trigger: GGTTCTCGTTCTGTTTGGGACCTCTCTGAAGGGAACCCAACACCAGGCTGCTTTCCTGGAGAAACTACCGTCAGAGTACTCTGACTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 90 bp GAAACAGAGACACAAAATGATGAAGGGCTTGGACCACAGGTGGACTaGCATCGGAGTTATCCTGAAGGCCAGAAGAGGCTTCAACATTCT +
Preference number: 1 (lower is better)
Translates to: ETETQNDEGLGPQVD*HRSYPEGQKRLQHS
Trigger: AGAATGTTGAAGCCTCTTCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCATCATTTTGTGTCTCTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
3UTR CCA 90 bp ATGAAGAAACAGAGACACAAAATGATGAAGGGCTTGGACCACAGGTaGACTGCCATCGGAGTTATCCTGAAGGCCAGAAGAGGCTTCAAC +
Preference number: 1 (lower is better)
Translates to: MKKQRHKMMKGLDHR*TAIGVILKARRGFN
Trigger: GTTGAAGCCTCTTCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCATCATTTTGTGTCTCTGTTTCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
3UTR CCA 90 bp AGACAGATGCATGGATGCAGGAGGAAAGGGATCTGTCCTCTGAAATaGGCTCTTTTTGAGTCAGATGCCCTTCTCTTCAAGATCCTCATC +
Preference number: 1 (lower is better)
Translates to: RQMHGCRRKGICPLK*ALFESDALLFKILI
Trigger: GATGAGGATCTTGAAGAGAAGGGCATCTGACTCAAAAAGAGCCCATTTCAGAGGACAGATCCCTTTCCTCCTGCATCCATGCATCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 90 bp GTGGGACCCAGCCCTCTTGGACTCAGCAGCCACTCTCCGACACTGTaGTCTCCAGGGTCACAGCCCCTTGCTGCATGGCCGCAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: VGPSPLGLSSHSPTL*SPGSQPLAAWPQWP
Trigger: TGGCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCTGGAGACAACAGTGTCGGAGAGTGGCTGCTGAGTCCAAGAGGGCTGGGTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR GCA 90 bp CAGCAGCCACTCTCCGACACTGTTGTCTCCAGGGTCACAGCCCCTTGCTGCATGGCTCGCCGTGGGCACTaGGCTTGTGCATGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: QQPLSDTVVSRVTAPCCMARRGH*ACAWPR
Trigger: CCTTGGCCATGCACAAGCGCAGTGCCCACGGCGAGC...CATGCAGCAAGGGGCTGTGACCCTGGAGACAACAGTGTCGGAGAGTGGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR CCA 90 bp GGTGGTGCTGCCGTGCTGGGTGACCATACTGATGGCACTCCCCAGGGCCTGCAGCCCTCAAAAGGGCACTaGAACGGGCGTTCACCAGTG +
Preference number: 2 (lower is better)
Translates to: GGAAVLGDHTDGTPQGLQPSKGH*NGRSPV
Trigger: CACTGGTGAACGCCCGTTCCAGTGCCCTTTTGAGGG...CTGCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACGGCAGCACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR GCA 90 bp GGCCAGGTCGGCATCAGGACTGGGGATGGTGAGGGTGGTGCTGCCGTGCTGGGTCCAGAGAGAGCACCCTaGAAGTCAGAGTACTCTGAC +
Preference number: 2 (lower is better)
Translates to: GQVGIRTGDGEGGAAVLGPERAP*KSEYSD
Trigger: GTCAGAGTACTCTGACTTGCAGGGTGCTCTCTCTGG...ACCCAGCACGGCAGCACCACCCTCACCATCCCCAGTCCTGATGCCGACCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR CCA 90 bp AGGACTGGGGATGGTGAGGGTGGTGCTGCCGTGCTGGGTGACCATACTGATGGCCACTGCGCTTGTGCATaGCCAAGGTGGAGGTCTGCC +
Preference number: 2 (lower is better)
Translates to: RTGDGEGGAAVLGDHTDGHCACA*PRWRSA
Trigger: GGCAGACCTCCACCTTGGCCATGCACAAGCGCAGTG...GCCATCAGTATGGTCACCCAGCACGGCAGCACCACCCTCACCATCCCCAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 90 bp GTCTCCAGGGTCACAGCCCCTTGCTGCATGGCCGCAGTGGCCACATaGATGGCCTCCTCTAAGGTCTGCTGTTCCTCCAGCTGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: VSRVTAPCCMAAVAT*MASSKVCCSSSCGE
Trigger: TTCCCCACAGCTGGAGGAACAGCAGACCTTAGAGGAGGCCATCAATGTGGCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCTGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 90 bp GCCAGAAGGGTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTaGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: ARRVFFRRRVGAQLI*RGGCPGVAWLLSAP
Trigger: GGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACACCCTTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR-3UTR TCA 90 bp GCCAGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAAGCCAAGAGCGAGCCTaGGACAGATGCATGGATGCA +
Preference number: 2 (lower is better)
Translates to: ARGPWNSQGQRDPLAHGGSQERA*DRCMDA
Trigger: TGCATCCATGCATCTGTCTCAGGCTCGCTCTTGGCT...TCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
3UTR-3UTR CCA 90 bp CACCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCGCGTTCCGTTGGCTGTaGCCAACAGTGCCACCTGTT +
Preference number: 2 (lower is better)
Translates to: HLLCVSHSLGPWGQEWPCAFRWL*PTVPPV
Trigger: AACAGGTGGCACTGTTGGCCACAGCCAACGGAACGC...GCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 90 bp TCTCATCCTCCACCGTCCACCTCATGCACAGGCTCTCCACCTCCTTaGGCTCAAGAAGCCCATGTCTGCCTCTATCCCACCCCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: SHPPPSTSCTGSPPP*AQEAHVCLYPTPAL
Trigger: CAGGGCAGGGGTGGGATAGAGGCAGACATGGGCTTCTTGAGCCAAAGGAGGTGGAGAGCCTGTGCATGAGGTGGACGGTGGAGGATGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 90 bp GCATGGCCAGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTaGCTCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGATCAT +
Preference number: 2 (lower is better)
Translates to: AWPGGPGIARVRETH*LTEEGLAEENRGDH
Trigger: ATGATCACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGCCATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
3UTR-3UTR TCA 90 bp ATGGCCGCAGTGGCCACATTGATGGCCTCCTCTAAGGTCTGCTGTTCCTCCAGCCCCAGTGCCACACGCTaGGCACTTAGTAGGGCTCCA +
Preference number: 2 (lower is better)
Translates to: MAAVATLMASSKVCCSSSPSATR*ALSRAP
Trigger: TGGAGCCCTACTAAGTGCTCAGCGTGTGGCACTGGG...GCTGGAGGAACAGCAGACCTTAGAGGAGGCCATCAATGTGGCCACTGCGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR GCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCGCACTCCCCAGGGCCTaGAGGTCTTCCGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLALPRA*RSSGDR
Trigger: CCTGTCCCCGGAAGACCTGCAGGCCCTGGGGAGTGC...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR CCA 90 bp TGCTTATACAAGCTCGAGTACTCGGTGAAGCGTTTCCCGCAGCCTGGCACCGTGGTATGGCTTCTCCCCTaGGGACACTGGGCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: CLYKLEYSVKRFPQPGTVVWLLP*GHWAVW
Trigger: CCACACAGCCCAGTGTCCCCAGGGGAGAAGCCATAC...CACGGTGCCAGGCTGCGGGAAACGCTTCACCGAGTACTCGAGCTTGTATAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR CCA 90 bp CAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGGTAAGAGCTGCTCATaGCCCAGGAACTGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: QLILRGGCPGVAWLLSAPGKSCS*PRNCGE
Trigger: TTCCCCACAGTTCCTGGGCCATGAGCAGCTCTTACC...GGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR GCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGGCTCTGTCTCCAACTTaGTGCCCTTTTCCATTACGG +
Preference number: 2 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQALSPT*CPFPLR
Trigger: CCGTAATGGAAAAGGGCAGCAAGTTGGAGACAGAGC...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR GCA 90 bp CAGCAGCCACTCTCCGACACTGTTGTCTCCAGGGTCACAGCCCCTTGCTGCATGGTCTTCCATTCCACCTaGAGTATACTCTCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: QQPLSDTVVSRVTAPCCMVFHST*SILSLP
Trigger: GGGGAGGGAGAGTATACTGCAGGTGGAATGGAAGAC...CATGCAGCAAGGGGCTGTGACCCTGGAGACAACAGTGTCGGAGAGTGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR CCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCCACAGCCTGGGCCCTTaGGGGCAAGAGTGGCCATGC +
Preference number: 2 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLHSLGP*GQEWPC
Trigger: GCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTG...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR-3UTR TCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCGATGATGCACTCCCCTaGTTCCAGCTGCCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLDDALP*FQLPGP
Trigger: GGGGCCAGGCAGCTGGAATCAGGGGAGTGCATCATC...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR-3UTR CCA 90 bp AAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGGTGGTGCTGCCGTGCTaGGTGACCATACTGATGGCA +
Preference number: 2 (lower is better)
Translates to: KARRGFNILPQPRASLRQVVLPC*VTILMA
Trigger: TGCCATCAGTATGGTCACCCAGCACGGCAGCACCAC...CTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR GCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCCCTCCAGGCTCCTTCTaGTGGCCTGAACCATGCTGC +
Preference number: 2 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLPPGSF*WPEPCC
Trigger: GCAGCATGGTTCAGGCCAGCAGAAGGAGCCTGGAGG...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR GCA 90 bp AAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGGTGTGGGTACGGACATaGTTCTGCAGGTCTCCTGAG +
Preference number: 2 (lower is better)
Translates to: KARRGFNILPQPRASLRQVWVRT*FCRSPE
Trigger: CTCAGGAGACCTGCAGAAGCATGTCCGTACCCACAC...CTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR GCA 90 bp CTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGAGGTTAGGCAGTTTTCTTaGTGTCTTCTCACCCCAGAG +
Preference number: 2 (lower is better)
Translates to: LILRGGCPGVAWLLSAPEVRQFS*CLLTPE
Trigger: CTCTGGGGTGAGAAGACAGCAAGAAAACTGCCTAAC...CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR-3UTR CCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCTGCCCTGGTGTAGCCTaGCTGTTGTCAGCTCCCGAG +
Preference number: 2 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLCPGVA*LLSAPE
Trigger: CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCA...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR-3UTR TCA 90 bp AAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGGGACGGTCACCTGTATaGGCTCGTTCATGCACCTTT +
Preference number: 2 (lower is better)
Translates to: KARRGFNILPQPRASLRQGRSPV*ARSCTF
Trigger: AAAGGTGCATGAACGAGCTCATACAGGTGACCGTCC...CTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR GCA 90 bp GGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGCCAGAAGAGGCTTCAAGTAGCCACAGCGGAATaGTCTGTCTCCAACTTGCTG +
Preference number: 2 (lower is better)
Translates to: GPQVDCHRSYPEGQKRLQVATAE*SVSNLL
Trigger: CAGCAAGTTGGAGACAGAGCATTCCGCTGTGGCTAC...TTGAAGCCTCTTCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR GCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCGGGCAAGAGTGGCCATaGAGATGGCACTTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLGQEWP*RWHFLQ
Trigger: CTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCC...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR-3UTR CCA 90 bp CATCTTCTTCAGTCACCATCGCCACCTGGGCTGGGATGTCATCTCTCTCTTCCTGCTCTCCACCTCCTTTaGCTCAAGAAGCCCATGTCT +
Preference number: 2 (lower is better)
Translates to: HLLQSPSPPGLGCHLSLPALHLL*LKKPMS
Trigger: AGACATGGGCTTCTTGAGCCAAAGGAGGTGGAGAGC...AGGAAGAGAGAGATGACATCCCAGCCCAGGTGGCGATGGTGACTGAAGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR CCA 90 bp ATGGCCGCAGTGGCCACATTGATGGCCTCCTCTAAGGTCTGCTGTTCCTCCAGCAGACCCCTTCTTTTGTaGGGAATCTTTGTCCTGGTA +
Preference number: 2 (lower is better)
Translates to: MAAVATLMASSKVCCSSSRPLLL*GIFVLV
Trigger: TACCAGGACAAAGATTCCCCACAAAAGAAGGGGTCT...GCTGGAGGAACAGCAGACCTTAGAGGAGGCCATCAATGTGGCCACTGCGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR GCA 90 bp TCATCTAATTCCCCTTTATTCCTTGTTGACTTCTCTGGCCGTGGGATCCCCTTTTCTCGCCTGTGTGGGTaGGCACATGTACCTTGCGGA +
Preference number: 2 (lower is better)
Translates to: SSNSPLFLVDFSGRGIPFSRLCG*AHVPCG
Trigger: TCCGCAAGGTACATGTGCGCACCCACACAGGCGAGA...AAAGGGGATCCCACGGCCAGAGAAGTCAACAAGGAATAAAGGGGAATTAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 90 bp TGCCCTTCTCTTCAAGATCCTCATCTAATTCCCCTTTATTCCTTGTaGACTTCTCTGGCCGTGGGATCCCCTTTCCTCCCAGATCTCTAC +
Preference number: 2 (lower is better)
Translates to: CPSLQDPHLIPLYSL*TSLAVGSPFLPDLY
Trigger: GTAGAGATCTGGGAGGAAAGGGGATCCCACGGCCAGAGAAGTCAACAAGGAATAAAGGGGAATTAGATGAGGATCTTGAAGAGAAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR GCA 90 bp TCATCTAATTCCCCTTTATTCCTTGTTGACTTCTCTGGCCGTGGGATCCCCTTTAGATCTCTACTCACCTaGACTGCAATGTGCGTTCCG +
Preference number: 2 (lower is better)
Translates to: SSNSPLFLVDFSGRGIPFRSLLT*TAMCVP
Trigger: CGGAACGCACATTGCAGTGCAGGTGAGTAGAGATCT...AAAGGGGATCCCACGGCCAGAGAAGTCAACAAGGAATAAAGGGGAATTAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR CCA 90 bp TCATCTAATTCCCCTTTATTCCTTGTTGACTTCTCTGGCCGTGGGATCCCCTTTTGTGTGTGCACCACGTaGTGCTTATACAAGCTCGAG +
Preference number: 2 (lower is better)
Translates to: SSNSPLFLVDFSGRGIPFCVCTT*CLYKLE
Trigger: CTCGAGCTTGTATAAGCACCACGTGGTGCACACACA...AAAGGGGATCCCACGGCCAGAGAAGTCAACAAGGAATAAAGGGGAATTAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR CCA 90 bp CAGATGCCCTTCTCTTCAAGATCCTCATCTAATTCCCCTTTATTCCTTGTTGACTTAAGTGATGAGCGGTaGTGTAGAGACGCCCACAGC +
Preference number: 2 (lower is better)
Translates to: QMPFSSRSSSNSPLFLVDLSDER*CRDAHS
Trigger: GCTGTGGGCGTCTCTACACCACCGCTCATCACTTAA...GTCAACAAGGAATAAAGGGGAATTAGATGAGGATCTTGAAGAGAAGGGCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 90 bp GTTGCACAACAAATCAGGGTTGAATTGAGATTTAGAAAGTGTCTCTaGACCTCCATTCAACTGCTTTTAAAGGTAAGAGCTGCTCATGGC +
Preference number: 2 (lower is better)
Translates to: VAQQIRVELRFRKCL*TSIQLLLKVRAAHG
Trigger: GCCATGAGCAGCTCTTACCTTTAAAAGCAGTTGAATGGAGGTCAAGAGACACTTTCTAAATCTCAATTCAACCCTGATTTGTTGTGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 90 bp TGGAAAAGTGATTTGCCTAAGGTTGCACAACAAATCAGGGTTGAATaGAGATTTAGAAAGTGTCTCTTGACCTCCATTCAACTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: WKSDLPKVAQQIRVE*RFRKCLLTSIQLLL
Trigger: TAAAAGCAGTTGAATGGAGGTCAAGAGACACTTTCTAAATCTCAATTCAACCCTGATTTGTTGTGCAACCTTAGGCAAATCACTTTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 72 bp TGCTGGGTGACCATACTGATGGCACTCCCCAGGGCCTaGAGGTCTTCCGGGGACAGGCTGACCTGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: CWVTILMALPRA*RSSGDRLTCWA
Trigger: TGCCCAGCAGGTCAGCCTGTCCCCGGAAGACCTGCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 72 bp GCATCAGGACTGGGGATGGTGAGGGTGGTGCTGCCGTaGTGGGTGACCATACTGATGGCACTCCCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: ASGLGMVRVVLP*WVTILMALPRA
Trigger: GGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACGGCAGCACCACCCTCACCATCCCCAGTCCTGATGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp TCAGGACTGGGGATGGTGAGGGTGGTGCTGCCGTGCTaGGTGACCATACTGATGGCACTCCCCAGGGCCTGC +
Preference number: 3 (lower is better)
Translates to: SGLGMVRVVLPC*VTILMALPRAC
Trigger: GCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACGGCAGCACCACCCTCACCATCCCCAGTCCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp AGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATaGCACTTCCTCCAGCATGGTGTGGGACCCAGCCCT +
Preference number: 3 (lower is better)
Translates to: SLGPWGQEWPCR*HFLQHGVGPSP
Trigger: AGGGCTGGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR TCA 72 bp GGATGCGCACGTGATTCTTATAGTTGGTGGCGCTGGTaGAGCCGCGGCCACAGTGGGGCTCCGGGCAGGTGT +
Preference number: 3 (lower is better)
Translates to: GCARDSYSWWRW*SRGHSGAPGRC
Trigger: ACACCTGCCCGGAGCCCCACTGTGGCCGCGGCTTCACCAGCGCCACCAACTATAAGAATCACGTGCGCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR TCA 72 bp GAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTaGAGAGCTGTCTGTGGCTCAACCCTACAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: EGRTGPAPLLLG*RAVCGSTLQGQ
Trigger: CTGGCCCTGTAGGGTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR GCA 72 bp AGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCGGGTaGCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGAG +
Preference number: 3 (lower is better)
Translates to: RRVGAQLILRGG*PGVAWLLSAPE
Trigger: CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGGGCGCCCACTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR-3UTR CAA 90 bp ACACTGTTGTCTCCAGGGTCACAGCCCCTTGCTGCATGGCCGCAGTGGCCACATCCGTGGGCACTGCGCTaGTGCATGGCCAAGGTGGAG +
Preference number: 3 (lower is better)
Translates to: TLLSPGSQPLAAWPQWPHPWALR*CMAKVE
Trigger: CTCCACCTTGGCCATGCACAAGCGCAGTGCCCACGG...ATGTGGCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCTGGAGACAACAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR TCA 72 bp TGGCTGTTGTCAGCTCCCGAGGATGATGCACTCCCCTaGTTCCAGCTGCCTGGCCCCCTTCTTGAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: WLLSAPEDDALP*FQLPGPLLEQG
Trigger: GCCCTGCTCAAGAAGGGGGCCAGGCAGCTGGAATCAGGGGAGTGCATCATCCTCGGGAGCTGACAACAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR GCA 72 bp GGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTaGTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGG +
Preference number: 3 (lower is better)
Translates to: GRWLLLGGQDRA*STATGLKSCLW
Trigger: CCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR CCA 72 bp GGCCACCTTCTATGTGTCAGCCACAGCCTGGGCCCTTaGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTC +
Preference number: 3 (lower is better)
Translates to: GHLLCVSHSLGP*GQEWPCRWHFL
Trigger: GAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR CCA 72 bp GCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTaGCTCAACCCTACAGGGCCAGTCCCCATAGCAGCC +
Preference number: 3 (lower is better)
Translates to: ACSTATGLKSCL*LNPTGPVPIAA
Trigger: GGCTGCTATGGGGACTGGCCCTGTAGGGTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR TCA 72 bp CATAGCCTGTCCATATGTGGCAGGCAGGGGGTGAGATaGGCACCCAGTGGGGTCTCATCCTCCACCGTCCAC +
Preference number: 3 (lower is better)
Translates to: HSLSICGRQGVR*APSGVSSSTVH
Trigger: GTGGACGGTGGAGGATGAGACCCCACTGGGTGCTCATCTCACCCCCTGCCTGCCACATATGGACAGGCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 72 bp CACCCAGTGGGGTCTCATCCTCCACCGTCCACCTCATaGACAGGCTCTCCACCTCCTTTGGCTCAAGAAGCC +
Preference number: 3 (lower is better)
Translates to: HPVGSHPPPSTS*TGSPPPLAQEA
Trigger: GGCTTCTTGAGCCAAAGGAGGTGGAGAGCCTGTGCATGAGGTGGACGGTGGAGGATGAGACCCCACTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 72 bp TCCGACACTGTTGTCTCCAGGGTCACAGCCCCTTGCTaGATGGCCGCAGTGGCCACATTGATGGCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: SDTVVSRVTAPC*MAAVATLMASS
Trigger: AGAGGAGGCCATCAATGTGGCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCTGGAGACAACAGTGTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp CATATGTGGCAGGCAGGGGGTGAGATGAGCACCCAGTaGGGTCTCATCCTCCACCGTCCACCTCATGCACAG +
Preference number: 3 (lower is better)
Translates to: HMWQAGGEMSTQ*GLILHRPPHAQ
Trigger: CTGTGCATGAGGTGGACGGTGGAGGATGAGACCCCACTGGGTGCTCATCTCACCCCCTGCCTGCCACATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp ACCCCAAGCAAACCGCCTGGTCATACGGGCTGCGTCTaGGTGCCATCGGCGCTGACCATGGTGACTGTATGT +
Preference number: 3 (lower is better)
Translates to: TPSKPPGHTGCV*VPSALTMVTVC
Trigger: ACATACAGTCACCATGGTCAGCGCCGATGGCACCCAGACGCAGCCCGTATGACCAGGCGGTTTGCTTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp CAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTaGCTGTTGTCAGCTCCCGAGGATGATGCACTCCCC +
Preference number: 3 (lower is better)
Translates to: QLILRGGCPGVA*LLSAPEDDALP
Trigger: GGGGAGTGCATCATCCTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR CCA 72 bp CCACAGCTGGTTGGCATCAGAGCTGACACAAGAGGCTaGGTCTCTCCACCAACCCTCCAGGCTCCTTCTGCT +
Preference number: 3 (lower is better)
Translates to: PQLVGIRADTRG*VSPPTLQAPSA
Trigger: AGCAGAAGGAGCCTGGAGGGTTGGTGGAGAGACCCAGCCTCTTGTGTCAGCTCTGATGCCAACCAGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp CACCGTCCACCTCATGCACAGGCTCTCCACCTCCTTTaGCTCAAGAAGCCCATGTCTGCCTCTATCCCACCC +
Preference number: 3 (lower is better)
Translates to: HRPPHAQALHLL*LKKPMSASIPP
Trigger: GGGTGGGATAGAGGCAGACATGGGCTTCTTGAGCCAAAGGAGGTGGAGAGCCTGTGCATGAGGTGGACGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR TCA 72 bp GCACCACGTGGTGCTTATACAAGCTCGAGTACTCGGTaGAGCGTTTCCCGCAGCCTGGCACCGTGCAAACGT +
Preference number: 3 (lower is better)
Translates to: APRGAYTSSSTR*SVSRSLAPCKR
Trigger: ACGTTTGCACGGTGCCAGGCTGCGGGAAACGCTTCACCGAGTACTCGAGCTTGTATAAGCACCACGTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 72 bp CACTGGAACGGGCGTTCACCAGTGTGGGTACGGACATaGTTCTGCAGGTCTCCTGAGGTCTTGAAGGCCTTG +
Preference number: 3 (lower is better)
Translates to: HWNGRSPVWVRT*FCRSPEVLKAL
Trigger: CAAGGCCTTCAAGACCTCAGGAGACCTGCAGAAGCATGTCCGTACCCACACTGGTGAACGCCCGTTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 72 bp CGTGGGATCCCCTTTCCTCCCAGATCTCTACTCACCTaGACTGCAATGTGCGTTCCGTTGGCTGTGGCCAAC +
Preference number: 3 (lower is better)
Translates to: RGIPFPPRSLLT*TAMCVPLAVAN
Trigger: GTTGGCCACAGCCAACGGAACGCACATTGCAGTGCAGGTGAGTAGAGATCTGGGAGGAAAGGGGATCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp AAGAGTCCTATTAGGCTAGGCATGGCCAGGGGGCCCTaGAATAGCCAGGGTCAGAGAGACCCACTTGCTCAC +
Preference number: 3 (lower is better)
Translates to: KSPIRLGMARGP*NSQGQRDPLAH
Trigger: GTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGCCATGCCTAGCCTAATAGGACTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR-3UTR CAA 90 bp CAGCCCTCTTGGACTCAGCAGCCACTCTCCGACACTGTTGTCTCCAGGGTCACAAGCTCCTCTGGGCACTaGTATGGTTTCTCACCAGTG +
Preference number: 3 (lower is better)
Translates to: QPSWTQQPLSDTVVSRVTSSSGH*YGFSPV
Trigger: CACTGGTGAGAAACCATACAAGTGCCCAGAGGAGCT...TGTGACCCTGGAGACAACAGTGTCGGAGAGTGGCTGCTGAGTCCAAGAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp AGGTCCCAAACAGAACGAGAACCCTCCACCCTCAACTaGAAGCAGCCCACCAGGCAGGTTACCTGTGGCAAA +
Preference number: 3 (lower is better)
Translates to: RSQTEREPSTLN*KQPTRQVTCGK
Trigger: TTTGCCACAGGTAACCTGCCTGGTGGGCTGCTTCCAGTTGAGGGTGGAGGGTTCTCGTTCTGTTTGGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp GGGTCAGAGAGACCCACTTGCTCACGGAGGAAGGACTaGCTGAAGAGAACCGTGGTGATCATCTACGTCAGC +
Preference number: 3 (lower is better)
Translates to: GSERPTCSRRKD*LKRTVVIIYVS
Trigger: GCTGACGTAGATGATCACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
3UTR TCA 72 bp GCTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTaGAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGC +
Preference number: 3 (lower is better)
Translates to: AWTTGGLPSELS*RPEEASTFCLS
Trigger: GCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
3UTR GCA 72 bp TTTCCTCCCAGATCTCTACTCACCTGCACTGCAATGTaGGTTCCGTTGGCTGTGGCCAACAGTGCCACCTGT +
Preference number: 3 (lower is better)
Translates to: FPPRSLLTCTAM*VPLAVANSATC
Trigger: ACAGGTGGCACTGTTGGCCACAGCCAACGGAACGCACATTGCAGTGCAGGTGAGTAGAGATCTGGGAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp AGGAATGACAAAATAAGAAACCCCAAGCAAACCGCCTaGTCATACGGGCTGCGTCTGGGTGCCATCGGCGCT +
Preference number: 3 (lower is better)
Translates to: RNDKIRNPKQTA*SYGLRLGAIGA
Trigger: AGCGCCGATGGCACCCAGACGCAGCCCGTATGACCAGGCGGTTTGCTTGGGGTTTCTTATTTTGTCATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp TATGAGCTCGTTCATGCACCTTTAAGTGATGAGCGGTaGTGTAGAGACGCCCACAGCCCTTGTAGCCACAGC +
Preference number: 3 (lower is better)
Translates to: YELVHAPLSDER*CRDAHSPCSHS
Trigger: GCTGTGGCTACAAGGGCTGTGGGCGTCTCTACACCACCGCTCATCACTTAAAGGTGCATGAACGAGCTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp TACTCACCTGCACTGCAATGTGCGTTCCGTTGGCTGTaGCCAACAGTGCCACCTGTTGATGACGAAGAGATG +
Preference number: 3 (lower is better)
Translates to: YSPALQCAFRWL*PTVPPVDDEEM
Trigger: CATCTCTTCGTCATCAACAGGTGGCACTGTTGGCCACAGCCAACGGAACGCACATTGCAGTGCAGGTGAGTA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR TCA 72 bp CAGTGCCACCTGTTGATGACGAAGAGATGCTACACTTaGGTCCTCAGCCACCACAGCCCCAGAGGTAATGAT +
Preference number: 3 (lower is better)
Translates to: QCHLLMTKRCYT*VLSHHSPRGND
Trigger: ATCATTACCTCTGGGGCTGTGGTGGCTGAGGACTCAAGTGTAGCATCTCTTCGTCATCAACAGGTGGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR GCA 72 bp ACACAAAATGATGAAGGGCTTGGACCACAGGTGGACTaGCATCGGAGTTATCCTGAAGGCCAGAAGAGGCTT +
Preference number: 3 (lower is better)
Translates to: TQNDEGLGPQVD*HRSYPEGQKRL
Trigger: AAGCCTCTTCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCATCATTTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
3UTR CCA 72 bp AAAGGCCTTTCCACAGCTGGGGAAGTCACATCTGTATaGACGGTCACCTGTATGAGCTCGTTCATGCACCTT +
Preference number: 3 (lower is better)
Translates to: KGLSTAGEVTSV*TVTCMSSFMHL
Trigger: AAGGTGCATGAACGAGCTCATACAGGTGACCGTCCATACAGATGTGACTTCCCCAGCTGTGGAAAGGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp CAGAGACACAAAATGATGAAGGGCTTGGACCACAGGTaGACTGCCATCGGAGTTATCCTGAAGGCCAGAAGA +
Preference number: 3 (lower is better)
Translates to: QRHKMMKGLDHR*TAIGVILKARR
Trigger: TCTTCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCATCATTTTGTGTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
3UTR TCA 72 bp AGATGCATGGATGCAGGAGGAAAGGGATCTGTCCTCTaGAATGGGCTCTTTTTGAGTCAGATGCCCTTCTCT +
Preference number: 3 (lower is better)
Translates to: RCMDAGGKGSVL*NGLFLSQMPFS
Trigger: AGAGAAGGGCATCTGACTCAAAAAGAGCCCATTTCAGAGGACAGATCCCTTTCCTCCTGCATCCATGCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR TCA 72 bp GAGGAAAGGGATCTGTCCTCTGAAATGGGCTCTTTTTaGGTCAGATGCCCTTCTCTTCAAGATCCTCATCTA +
Preference number: 3 (lower is better)
Translates to: EERDLSSEMGSF*VRCPSLQDPHL
Trigger: TAGATGAGGATCTTGAAGAGAAGGGCATCTGACTCAAAAAGAGCCCATTTCAGAGGACAGATCCCTTTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CCA 72 bp CTGGGAACAACCCAGAAGAGAATGGATAAAACCGTATaGGTCAGATTAATTAGCCTGAGGCTCAGAGCTAAG +
Preference number: 3 (lower is better)
Translates to: LGTTQKRMDKTV*VRLISLRLRAK
Trigger: CTTAGCTCTGAGCCTCAGGCTAATTAATCTGACCCATACGGTTTTATCCATTCTCTTCTGGGTTGTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CCTGCCCTGGGCAGGGGCTGGAAAAGCCCACTCTGCCCTGCTTCCCTCTCCAGGGGTCCAGCAGAAGCGTaGGGAGGTGGCGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PALGRGWKSPLCPASLSRGPAEA*GGGGGP
Trigger: GGGGCCTCCGCCACCTCCTCACGCTTCTGCTGGACC...CCTGGAGAGGGAAGCAGGGCAGAGTGGGCTTTTCCAGCCCCTGCCCAGGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp GCTGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCAGCCGACAGACCGCCATaGACCGGGCCCCGCCACCAG +
Preference number: 4 (lower is better)
Translates to: AGLQGGGYCWEGRTGPAPADRPP*TGPRHQ
Trigger: CTGGTGGCGGGGCCCGGTGCATGGCGGTCTGTCGGC...TGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp GCTGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCAGCCTGGCCCCCTTCTTaGGCAGGGCCCCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: AGLQGGGYCWEGRTGPAPAWPPS*AGPPFP
Trigger: AGGGAATGGGGGCCCTGCTCAAGAAGGGGGCCAGGC...TGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp CTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGAGGAGGCGCAGGTTGTaGGGGACGCAGGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LCVSHSLGPWGQEWPCRWRRRRL*GTQALG
Trigger: CCCCAGGGCCTGCGTCCCTCACAACCTGCGCCTCCT...CCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp TGGCCAGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGTGGCAGGCAGGGGGTaGGATGAGCACCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: WPGGPGIARVRETHLLTEVAGRG*DEHPVG
Trigger: CCCCACTGGGTGCTCATCTCACCCCCTGCCTGCCAC...CTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp TGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGAGTTGGTGGCGCTGGTaGAGCCGCGGCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: WALGGKSGHADGTSSSMVSWWRW*SRGHSG
Trigger: CCCACTGTGGCCGCGGCTTCACCAGCGCCACCAACT...CACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp GTGCTGCCGTGCTGGGTGACCATACTGATGGCACTCCCCAGGGCCTGCAGGTCTCTTCCGGGGACAGGCTaGCCTGCTGGGCACCATCCT +
Preference number: 4 (lower is better)
Translates to: VLPCWVTILMALPRACRSLPGTG*PAGHHP
Trigger: AGGATGGTGCCCAGCAGGTCAGCCTGTCCCCGGAAG...AGACCTGCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACGGCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CCTGCCCTGGGCAGGGGCTGGAAAAGCCCACTCTGCCCTGCTTCCCTCTCCAGGTTGCGTCATCACTTCTaGGGCCTGCGGGCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PALGRGWKSPLCPASLSRLRHHF*GLRARR
Trigger: CCTTCTCGCCCGCAGGCCGCAGAAGTGATGACGCAA...CCTGGAGAGGGAAGCAGGGCAGAGTGGGCTTTTCCAGCCCCTGCCCAGGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp TGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGGCACTCCCCAGGGCCTaGAGGTCTTCCGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: WALGGKSGHADGTSSSMVALPRA*RSSGDR
Trigger: CCTGTCCCCGGAAGACCTGCAGGCCCTGGGGAGTGC...CACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000373953.8
CDS-3UTR GCA 90 bp GGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCAGGGTCACAGCCCCTTaGTGCATGGCCGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: GGGYCWEGRTGPAPLLLGRVTAP*CMAAVA
Trigger: GGCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCT...GCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCGCCTCCAGCTCGCCGTaGGCACTGCGCTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: VSHSLGPWGQEWPCRWHFASSSP*ALRLCM
Trigger: CATGCACAAGCGCAGTGCCCACGGCGAGCTGGAGGC...GAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCAGTTGGTGGCGCTGGTaGAGCCGCGGCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: LGARVAMQMALPPAWCGTSWWRW*SRGHSG
Trigger: CCCACTGTGGCCGCGGCTTCACCAGCGCCACCAACT...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp TGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGCTTCCGGGGACAGGCTaGCCTGCTGGGCACCATCCT +
Preference number: 4 (lower is better)
Translates to: WALGGKSGHADGTSSSMVLPGTG*PAGHHP
Trigger: AGGATGGTGCCCAGCAGGTCAGCCTGTCCCCGGAAG...CACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000373953.8
CDS-3UTR TCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACGCCTGGCCCCCTTCTTaGGCAGGGCCCCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNAWPPS*AGPPFP
Trigger: AGGGAATGGGGGCCCTGCTCAAGAAGGGGGCCAGGC...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GCTGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCAGGACGGCTTCCAGGGTaGTGGGGTCATAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: AGLQGGGYCWEGRTGPAPGRLPG*WGHSLL
Trigger: GAGAAGGCTATGACCCCAGCACCCTGGAAGCCGTCC...TGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GCTGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCAGCCCTCATCATCCTCTaGTGCCAGGTCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: AGLQGGGYCWEGRTGPAPALIIL*CQVLQA
Trigger: GGCTTGGAGGACCTGGCAGCAGAGGATGATGAGGGC...TGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GCTGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCATGGGCACTGCGCTTGTaGATGGCCAAGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: AGLQGGGYCWEGRTGPAPWALRL*MAKVEV
Trigger: GACCTCCACCTTGGCCATGCACAAGCGCAGTGCCCA...TGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp AGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAAGGGCTCGCCGTGGGCACTaGGCTTGTGCATGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: RGPWNSQGQRDPLAHGGRARRGH*ACAWPR
Trigger: CCTTGGCCATGCACAAGCGCAGTGCCCACGGCGAGC...CCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CCTGCCCTGGGCAGGGGCTGGAAAAGCCCACTCTGCCCTGCTTCCCTCTCCAGGCCCTCAAAAGGGCACTaGAACGGGCGTTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: PALGRGWKSPLCPASLSRPSKGH*NGRSPV
Trigger: CACTGGTGAACGCCCGTTCCAGTGCCCTTTTGAGGG...CCTGGAGAGGGAAGCAGGGCAGAGTGGGCTTTTCCAGCCCCTGCCCAGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp GCTGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCAGGCCTCTCGCCTGTGTaGGTGCGCACATGTACCTTG +
Preference number: 4 (lower is better)
Translates to: AGLQGGGYCWEGRTGPAPGLSPV*VRTCTL
Trigger: CAAGGTACATGTGCGCACCCACACAGGCGAGAGGCC...TGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCCATACGGGCTGCGTCTaGGTGCCATCGGCGCTGACC +
Preference number: 4 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPHTGCV*VPSALT
Trigger: GGTCAGCGCCGATGGCACCCAGACGCAGCCCGTATG...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGCACAGCCTGGGCCCTTaGGGGCAAGAGTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQHSLGP*GQEWPC
Trigger: GCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTG...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp GCTGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTCCTTCTGCTGGCCTaGACCATGCTGCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: AGLQGGGYCWEGRTGPAPLLLLA*TMLPCT
Trigger: AGTGCAAGGCAGCATGGTTCAGGCCAGCAGAAGGAG...TGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGGATGATGCACTCCCCTaGTTCCAGCTGCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LCVSHSLGPWGQEWPCRWDDALP*FQLPGP
Trigger: GGGGCCAGGCAGCTGGAATCAGGGGAGTGCATCATC...CCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGGATGATGCACTCCCCTaGTTCCAGCTGCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQDDALP*FQLPGP
Trigger: GGGGCCAGGCAGCTGGAATCAGGGGAGTGCATCATC...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GCTGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCATCTCGCCTGTGTGGGTaGGCACATGTACCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: AGLQGGGYCWEGRTGPAPSRLCG*AHVPCG
Trigger: TCCGCAAGGTACATGTGCGCACCCACACAGGCGAGA...TGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGCTCGCCGTGGGCACTaGGCTTGTGCATGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: QLILRGGCPGVAWLLSAPARRGH*ACAWPR
Trigger: CCTTGGCCATGCACAAGCGCAGTGCCCACGGCGAGC...GGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCGCTCGCCGTGGGCACTaGGCTTGTGCATGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSARRGH*ACAWPR
Trigger: CCTTGGCCATGCACAAGCGCAGTGCCCACGGCGAGC...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CACCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCCGGACTCTCCTCGGCTaGAGAGGCGGCCTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: HLLCVSHSLGPWGQEWPCRTLLG*RGGLKL
Trigger: CAACTTGAGGCCGCCTCTGCAGCCGAGGAGAGTCCG...GCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp AAGCTATCCGGGGTCGTTTGGGTGGCGGACTCTCCTCGGCTGCAGAGGCGGCCTGGGCAAGAGTGGCCATaGAGATGGCACTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KLSGVVWVADSPRLQRRPGQEWP*RWHFLQ
Trigger: CTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCC...AGGCCGCCTCTGCAGCCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp GGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTCCCCTGATTCCAGCTaGCTGGCCCCCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GGGYCWEGRTGPAPLLLGSPDSS*LAPFLS
Trigger: GCTCAAGAAGGGGGCCAGGCAGCTGGAATCAGGGGA...GCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACGGGCAGGACAGGGCCTaGTCCACTGCTACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNGQDRA*STATGL
Trigger: CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCC...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCCAGGGAGGTGGTTATTaGTGGGAGGGCAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: GGGYCWEGRTGPAPLLLGQGGGY*WEGRTG
Trigger: CCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTG...GCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCATGATTGTGACGGGCTaGGTCTGGGTGCCATCGGCG +
Preference number: 4 (lower is better)
Translates to: GGGYCWEGRTGPAPLLLGMIVTG*VWVPSA
Trigger: CGCCGATGGCACCCAGACGCAGCCCGTCACAATCAT...GCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373953.8
CDS-3UTR CCA 90 bp CAGCAGCCACTCTCCGACACTGTTGTCTCCAGGGTCACAGCCCCTTGCTGCATGAGAAGCGTGAGGAGGTaGCGGAGGCCCCGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: QQPLSDTVVSRVTAPCCMRSVRR*RRPRGL
Trigger: AAGCCCTCGGGGCCTCCGCCACCTCCTCACGCTTCT...CATGCAGCAAGGGGCTGTGACCCTGGAGACAACAGTGTCGGAGAGTGGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp GTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCGGCTTCCAGGGTGCTaGGGTCATAGCCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VSHSLGPWGQEWPCRWHFRLPGC*GHSLLW
Trigger: CCAGAGAAGGCTATGACCCCAGCACCCTGGAAGCCG...GAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp AAGCTATCCGGGGTCGTTTGGGTGGCGGACTCTCCTCGGCTGCAGAGGCGGCCTTCTGTACGGCCAGGATaGTGCTCTCCGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: KLSGVVWVADSPRLQRRPSVRPG*CSPMAQ
Trigger: CTGTGCCATCGGAGAGCACCATCCTGGCCGTACAGA...AGGCCGCCTCTGCAGCCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCGCCTCCAGCTCGCCGTaGGCACTGCGCTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: LGARVAMQMALPPAWCGTASSSP*ALRLCM
Trigger: CATGCACAAGCGCAGTGCCCACGGCGAGCTGGAGGC...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GGCCAGGTCGGCATCAGGACTGGGGATGGTGAGGGTGGTGCTGCCGTGCTGGGTGGTAAGAGCTGCTCATaGCCCAGGAACTGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GQVGIRTGDGEGGAAVLGGKSCS*PRNCGE
Trigger: TTCCCCACAGTTCCTGGGCCATGAGCAGCTCTTACC...ACCCAGCACGGCAGCACCACCCTCACCATCCCCAGTCCTGATGCCGACCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGAGCACAGCCTGGGCCCTTaGGGGCAAGAGTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: LILRGGCPGVAWLLSAPEHSLGP*GQEWPC
Trigger: GCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTG...CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGCCCTGGTGTAGCCTaGCTGTTGTCAGCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: GGGYCWEGRTGPAPLLLGCPGVA*LLSAPE
Trigger: CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCA...GCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGGAGAGGCGGGTGCCCTaGTGTAGCCTGGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LCVSHSLGPWGQEWPCRWERRVP*CSLAVV
Trigger: GACAACAGCCAGGCTACACCAGGGCACCCGCCTCTC...CCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CCTGCCCTGGGCAGGGGCTGGAAAAGCCCACTCTGCCCTGCTTCCCTCTCCAGGCTGAAGAGCTGTCTGTaGCTCAACCCTACAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PALGRGWKSPLCPASLSRLKSCL*LNPTGP
Trigger: TGGCCCTGTAGGGTTGAGCCACAGACAGCTCTTCAG...CCTGGAGAGGGAAGCAGGGCAGAGTGGGCTTTTCCAGCCCCTGCCCAGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CCTGCCCTGGGCAGGGGCTGGAAAAGCCCACTCTGCCCTGCTTCCCTCTCCAGGGAAGCTTCTCTCCTTTaGCAGCTTGCTGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: PALGRGWKSPLCPASLSREASLL*QLAGRR
Trigger: CCTACGTCCAGCAAGCTGTCAAAGGAGAGAAGCTTC...CCTGGAGAGGGAAGCAGGGCAGAGTGGGCTTTTCCAGCCCCTGCCCAGGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp GCTGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCATGTACCGTCACCTGGTaGATGTATGCGGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: AGLQGGGYCWEGRTGPAPCTVTW*MYAVVP
Trigger: TGGGACCACCGCATACATTCACCAGGTGACGGTACA...TGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCTGCTGGGCACCATCCTaGGTGATCAGAGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPCWAPS*VIRATW
Trigger: CCAGGTGGCTCTGATCACTCAGGATGGTGCCCAGCA...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGTGCTGGGCACCATCCTaGGTGATCAGAGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQCWAPS*VIRATW
Trigger: CCAGGTGGCTCTGATCACTCAGGATGGTGCCCAGCA...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp GCTGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCAAGCCAAGAGCGAGCCTaGGACAGATGCATGGATGCA +
Preference number: 4 (lower is better)
Translates to: AGLQGGGYCWEGRTGPAPSQERA*DRCMDA
Trigger: TGCATCCATGCATCTGTCTCAGGCTCGCTCTTGGCT...TGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGTCTGGGTCACAAATCTaGCAGCCCCCGAGGGCGACT +
Preference number: 4 (lower is better)
Translates to: LCVSHSLGPWGQEWPCRWSGSQI*QPPRAT
Trigger: AGTCGCCCTCGGGGGCTGTCAGATTTGTGACCCAGA...CCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GTGCTGCCGTGCTGGGTGACCATACTGATGGCACTCCCCAGGGCCTGCAGGTCTCTAAGGGTCACCGTGTaGAGCCCCAAGCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: VLPCWVTILMALPRACRSLRVTV*SPKLSM
Trigger: CATGGAGAGCTTGGGGCTGCACACGGTGACCCTTAG...AGACCTGCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACGGCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CACCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCGTACGGCCAGGATGGTaGTCTCCGATGGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: HLLCVSHSLGPWGQEWPCVRPGW*SPMAQP
Trigger: TGGCTGTGCCATCGGAGAGCACCATCCTGGCCGTAC...GCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGGTACGGCCAGGATGGTaGTCTCCGATGGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQVRPGW*SPMAQP
Trigger: TGGCTGTGCCATCGGAGAGCACCATCCTGGCCGTAC...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp TGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGGTCTTGCTGGCATACTaGTCCAGGGCCACCACTGCG +
Preference number: 4 (lower is better)
Translates to: WALGGKSGHADGTSSSMVVLLAY*SRATTA
Trigger: CGCAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGAC...CACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp GGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTCTCGCCTGTGTGGGTaGGCACATGTACCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: GGGYCWEGRTGPAPLLLGSRLCG*AHVPCG
Trigger: TCCGCAAGGTACATGTGCGCACCCACACAGGCGAGA...GCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp AGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGCGCAGCCTGGCACCGTaGAAACGTATGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RWLLLGGQDRACSTATGLRSLAP*KRMASP
Trigger: GGGAGAAGCCATACGTTTGCACGGTGCCAGGCTGCG...CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GCCAGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGATCTTGCCGCAGGTGCTaGAGGTGTAGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: ARGPWNSQGQRDPLAHGGSCRRC*RCRACS
Trigger: ACTGCAAGCCCTACACCTGCAGCACCTGCGGCAAGA...TCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCTGGGCACTGCGCTTGTaGATGGCCAAGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPWALRL*MAKVEV
Trigger: GACCTCCACCTTGGCCATGCACAAGCGCAGTGCCCA...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACCCTGGTCATACGGGCTaGGTCTGGGTGCCATCGGCG +
Preference number: 4 (lower is better)
Translates to: ARVRETHLLTEEGLAEENPGHTG*VWVPSA
Trigger: CGCCGATGGCACCCAGACGCAGCCCGTATGACCAGG...GTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCGTCACAGCCCCTTGCTaGATGGCCGCAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSVTAPC*MAAVAT
Trigger: TGTGGCCACTGCGGCCATGCAGCAAGGGGCTGTGAC...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGTCACAGCCCCTTGCTaGATGGCCGCAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: QLILRGGCPGVAWLLSAPVTAPC*MAAVAT
Trigger: TGTGGCCACTGCGGCCATGCAGCAAGGGGCTGTGAC...GGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGTCCCCTGATTCCAGCTaGCTGGCCCCCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LCVSHSLGPWGQEWPCRWSPDSS*LAPFLS
Trigger: GCTCAAGAAGGGGGCCAGGCAGCTGGAATCAGGGGA...CCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp TGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGCAGGGAGGTGGTTATTaGTGGGAGGGCAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: WALGGKSGHADGTSSSMVQGGGY*WEGRTG
Trigger: CCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTG...CACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GCCCCTGAGGAATTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCGCCGACAGACCGCCATaGACCGGGCCCCGCCACCAG +
Preference number: 4 (lower is better)
Translates to: APEELIDCGVRKSLVPSSADRPP*TGPRHQ
Trigger: CTGGTGGCGGGGCCCGGTGCATGGCGGTCTGTCGGC...GCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAATTCCTCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCACCTTGCTGGCATACTaGTCCAGGGCCACCACTGCG +
Preference number: 4 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPTLLAY*SRATTA
Trigger: CGCAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGT...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCAGCTGCACTGCAATGTaGGTTCCGTTGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VSHSLGPWGQEWPCRWHFSCTAM*VPLAVA
Trigger: GGCCACAGCCAACGGAACGCACATTGCAGTGCAGCT...GAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp AGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGGATGGTGCTCTCCGATaGCACAGCCACAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RWLLLGGQDRACSTATGLDGALR*HSHRVV
Trigger: CACCACCCTGTGGCTGTGCCATCGGAGAGCACCATC...CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCGGGCGTTCACCAGTGTaGGTACGGACATGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VSHSLGPWGQEWPCRWHFGRSPV*VRTCFC
Trigger: GCAGAAGCATGTCCGTACCCACACTGGTGAACGCCC...GAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGCCTCTCGCCTGTGTaGGTGCGCACATGTACCTTG +
Preference number: 4 (lower is better)
Translates to: GPLGARVAMQMALPPAWCGLSPV*VRTCTL
Trigger: CAAGGTACATGTGCGCACCCACACAGGCGAGAGGCC...ACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CACCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCGCGTTTCCCGCAGCCTaGCACCGTGCAAACGTATGG +
Preference number: 4 (lower is better)
Translates to: HLLCVSHSLGPWGQEWPCAFPAA*HRANVW
Trigger: CCATACGTTTGCACGGTGCCAGGCTGCGGGAAACGC...GCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGCACTGCGCTTGTGCATaGCCAAGGTGGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: WALGGKSGHADGTSSSMVHCACA*PRWRSA
Trigger: GGCAGACCTCCACCTTGGCCATGCACAAGCGCAGTG...CACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACCTATCCGGGGTCGTTTaGGTGGCGGACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNLSGVV*VADSPR
Trigger: CCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAG...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCGAGAGGCGGGTGCCCTaGTGTAGCCTGGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LGARVAMQMALPPAWCGTERRVP*CSLAVV
Trigger: GACAACAGCCAGGCTACACCAGGGCACCCGCCTCTC...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GCTGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTCCACTGCTACTaGGCTGAAGAGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: AGLQGGGYCWEGRTGPAPLLHCY*AEELSV
Trigger: CACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAG...TGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCGCCAGGCATCTCAGCTaGCCTCCAGGGAGGTGGTTA +
Preference number: 4 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPARHLS*PPGRWL
Trigger: TAACCACCTCCCTGGAGGCCAGCTGAGATGCCTGGC...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGCCAGGCATCTCAGCTaGCCTCCAGGGAGGTGGTTA +
Preference number: 4 (lower is better)
Translates to: GPLGARVAMQMALPPAWCARHLS*PPGRWL
Trigger: TAACCACCTCCCTGGAGGCCAGCTGAGATGCCTGGC...ACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGGCAGCTGAGGAGTGGTaGGGGCTGGGCACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQAAEEW*GLGTFS
Trigger: AGAAAAGGTGCCCAGCCCCCACCACTCCTCAGCTGC...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGGTGACGGGCTGCGTCTaGGTGCCATCGGCGCTGACC +
Preference number: 4 (lower is better)
Translates to: SERPTCSRRKDWLKRTVVVTGCV*VPSALT
Trigger: GGTCAGCGCCGATGGCACCCAGACGCAGCCCGTCAC...CACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498555.1
3UTR CAA 72 bp AGCCCTCTTGGACTCAGCAGCCACTCTCCGACACTGTaGTCTCCAGGGTCACAGCCCCTTGCTGCATGGCCG +
Preference number: 4 (lower is better)
Translates to: SPLGLSSHSPTL*SPGSQPLAAWP
Trigger: CGGCCATGCAGCAAGGGGCTGTGACCCTGGAGACAACAGTGTCGGAGAGTGGCTGCTGAGTCCAAGAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp GTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTTCTGCAGGTCTCCTaGGGTCTTGAAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: VSHSLGPWGQEWPCRWHFLLQVS*GLEGLA
Trigger: AGCAAGGCCTTCAAGACCTCAGGAGACCTGCAGAAG...GAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp AAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGAGTTGGTGGCGCTGGTaGAGCCGCGGCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: KARRGFNILPQPRASLRQSWWRW*SRGHSG
Trigger: CCCACTGTGGCCGCGGCTTCACCAGCGCCACCAACT...CTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp GGTAAGCTATCCGGGGTCGTTTGGGTGGCGGACTCTCCTCGGCTGCAGAGGCGGAAGAGATGCTACACTTaGGTCCTCAGCCACCACAGC +
Preference number: 4 (lower is better)
Translates to: GKLSGVVWVADSPRLQRRKRCYT*VLSHHS
Trigger: GCTGTGGTGGCTGAGGACTCAAGTGTAGCATCTCTT...CCGCCTCTGCAGCCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGCTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGGTCAGCTCCCGAGGATaGTGCACTCCCCTGATTCCA +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQVSSRG*CTPLIP
Trigger: TGGAATCAGGGGAGTGCATCATCCTCGGGAGCTGAC...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp GGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCGCCCCAATCTCTACCTaGGAAGGGGAACAGACTGAG +
Preference number: 4 (lower is better)
Translates to: GGGYCWEGRTGPAPLLLGAPIST*EGEQTE
Trigger: CTCAGTCTGTTCCCCTTCTCAGGTAGAGATTGGGGC...GCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp AGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAAGGCCACTGCTACTGGGCTaGAGAGCTGTCTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RGPWNSQGQRDPLAHGGRPLLLG*RAVCGS
Trigger: TGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGG...CCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp TGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGCCACTGCTACTGGGCTaGAGAGCTGTCTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: WALGGKSGHADGTSSSMVPLLLG*RAVCGS
Trigger: TGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGG...CACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCATCACTTCTGCGGCCTaGGGGCGAGAAGGTGCGCTT +
Preference number: 4 (lower is better)
Translates to: QLILRGGCPGVAWLLSAPITSAA*GREGAL
Trigger: AAGCGCACCTTCTCGCCCGCAGGCCGCAGAAGTGAT...GGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp TGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGCTAAGGGTCACCGTGTaGAGCCCCAAGCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: WALGGKSGHADGTSSSMVLRVTV*SPKLSM
Trigger: CATGGAGAGCTTGGGGCTGCACACGGTGACCCTTAG...CACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACGGACGGCTTCCAGGGTaGTGGGGTCATAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNGRLPG*WGHSLL
Trigger: GAGAAGGCTATGACCCCAGCACCCTGGAAGCCGTCC...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCGCCCTCATCATCCTCTaGTGCCAGGTCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSALIIL*CQVLQA
Trigger: GGCTTGGAGGACCTGGCAGCAGAGGATGATGAGGGC...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGGGCCACCACTGCGTCTaGACTGAAGCCCTCATCATC +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQGHHCV*TEALII
Trigger: GATGATGAGGGCTTCAGTGCAGACGCAGTGGTGGCC...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAACGCAGCCTGGCACCGTaGAAACGTATGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VVIAGRAGQGLLHCYWAERSLAP*KRMASP
Trigger: GGGAGAAGCCATACGTTTGCACGGTGCCAGGCTGCG...TTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGTCTTGCCGCAGGTGCTaGAGGTGTAGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LCVSHSLGPWGQEWPCRWSCRRC*RCRACS
Trigger: ACTGCAAGCCCTACACCTGCAGCACCTGCGGCAAGA...CCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGAGTGGGCACTGCGCTTGTaGATGGCCAAGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LILRGGCPGVAWLLSAPEWALRL*MAKVEV
Trigger: GACCTCCACCTTGGCCATGCACAAGCGCAGTGCCCA...CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GCCAGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAGAGGCTTCAACATTCTaGCTCAGCCAAGAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: ARGPWNSQGQRDPLAHGGEASTF*LSQERA
Trigger: GGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTC...TCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp GGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTATTTTGAGAGGCGGGTaGCCTGGTGTAGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPLGARVAMQMALPPAWCILRGG*PGVAWL
Trigger: CAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAAT...ACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCAGGGCCTGCTCCACTaGTACTGGGCTGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSQGLLH*YWAEEL
Trigger: CAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTG...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCACCTTGCTGGCATACTaGTCCAGGGCCACCACTGCG +
Preference number: 4 (lower is better)
Translates to: LGARVAMQMALPPAWCGTTLLAY*SRATTA
Trigger: CGCAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGT...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGAGCTGCACTGCAATGTaGGTTCCGTTGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LCVSHSLGPWGQEWPCRWSCTAM*VPLAVA
Trigger: GGCCACAGCCAACGGAACGCACATTGCAGTGCAGCT...CCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCGCCTCCTCTAAGGTCTaGTGTTCCTCCAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: VSHSLGPWGQEWPCRWHFASSKV*CSSSCT
Trigger: AGTGCAGCTGGAGGAACAGCAGACCTTAGAGGAGGC...GAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCGGTGAATGTATGCGGTaGTCCCATCCTCGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GGGYCWEGRTGPAPLLLGGECMR*SHPRAG
Trigger: TCCAGCTCGAGGATGGGACCACCGCATACATTCACC...GCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGTCTGTACGGCCAGGATaGTGCTCTCCGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQSVRPG*CSPMAQ
Trigger: CTGTGCCATCGGAGAGCACCATCCTGGCCGTACAGA...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TGGCCAGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGGGGAAAAGTCTTGCTaGCATACTGCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: WPGGPGIARVRETHLLTEGEKSC*HTAPGP
Trigger: TGGCCCTGGAGCAGTATGCCAGCAAGACTTTTCCCC...CTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp AAGCTATCCGGGGTCGTTTGGGTGGCGGACTCTCCTCGGCTGCAGAGGCGGCCTTTAAGTGATGAGCGGTaGTGTAGAGACGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: KLSGVVWVADSPRLQRRPLSDER*CRDAHS
Trigger: GCTGTGGGCGTCTCTACACCACCGCTCATCACTTAA...AGGCCGCCTCTGCAGCCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp AAGCTATCCGGGGTCGTTTGGGTGGCGGACTCTCCTCGGCTGCAGAGGCGGCCTGCTGCACAGCTCCTCTaGGCACTTGTATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: KLSGVVWVADSPRLQRRPAAQLL*ALVWFL
Trigger: GAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGC...AGGCCGCCTCTGCAGCCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp GCTGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCAGCTGCACAGCTCCTCTaGGCACTTGTATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: AGLQGGGYCWEGRTGPAPAAQLL*ALVWFL
Trigger: GAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGC...TGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTCCCTCAAAAGGGCACTaGAACGGGCGTTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: GPLGARVAMQMALPPAWCPSKGH*NGRSPV
Trigger: CACTGGTGAACGCCCGTTCCAGTGCCCTTTTGAGGG...ACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp ATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGCTCCCCTGGGGACACTaGGCTGTGTGGATGCGCACG +
Preference number: 4 (lower is better)
Translates to: IARVRETHLLTEEGLAEELPWGH*AVWMRT
Trigger: CGTGCGCATCCACACAGCCCAGTGTCCCCAGGGGAG...CTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp GGTCCCAAACAGAACGAGAACCCTCCACCCTCAACTGGAAGCAGCCCACCAGGCGCGTTTCCCGCAGCCTaGCACCGTGCAAACGTATGG +
Preference number: 4 (lower is better)
Translates to: GPKQNENPPPSTGSSPPGAFPAA*HRANVW
Trigger: CCATACGTTTGCACGGTGCCAGGCTGCGGGAAACGC...GCCTGGTGGGCTGCTTCCAGTTGAGGGTGGAGGGTTCTCGTTCTGTTTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACGCGTTTCCCGCAGCCTaGCACCGTGCAAACGTATGG +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNAFPAA*HRANVW
Trigger: CCATACGTTTGCACGGTGCCAGGCTGCGGGAAACGC...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCTGTGCATGGCCAAGGTaGAGGTCTGCCGGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPCAWPR*RSAGRS
Trigger: AGACCTACCGGCAGACCTCCACCTTGGCCATGCACA...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCACTGCGCTTGTGCATaGCCAAGGTGGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LGARVAMQMALPPAWCGTHCACA*PRWRSA
Trigger: GGCAGACCTCCACCTTGGCCATGCACAAGCGCAGTG...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GGTAAGCTATCCGGGGTCGTTTGGGTGGCGGACTCTCCTCGGCTGCAGAGGCGGATGGCCCAGGAACTGTaGGGAAGACCCCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: GKLSGVVWVADSPRLQRRMAQEL*GRPLLL
Trigger: CAAAAGAAGGGGTCTTCCCCACAGTTCCTGGGCCAT...CCGCCTCTGCAGCCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGCTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCGCGTTCCGTTGGCTGTaGCCAACAGTGCCACCTGTT +
Preference number: 4 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPAFRWL*PTVPPV
Trigger: AACAGGTGGCACTGTTGGCCACAGCCAACGGAACGC...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GTGCTGCCGTGCTGGGTGACCATACTGATGGCACTCCCCAGGGCCTGCAGGTCTCTGCTCCACTGCTACTaGGCTGAAGAGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VLPCWVTILMALPRACRSLLHCY*AEELSV
Trigger: CACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAG...AGACCTGCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACGGCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp GGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCCTGCTCCACTGCTACTaGGCTGAAGAGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GGGYCWEGRTGPAPLLLGLLHCY*AEELSV
Trigger: CACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAG...GCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGCAGCTGAGGAGTGGTaGGGGCTGGGCACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VVIAGRAGQGLLHCYWAEAAEEW*GLGTFS
Trigger: AGAAAAGGTGCCCAGCCCCCACCACTCCTCAGCTGC...TTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR CAA 72 bp GGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTaGCTCACGGAGGAAGGACTGGCTGAAGAGAACCGT +
Preference number: 4 (lower is better)
Translates to: GGPGIARVRETH*LTEEGLAEENR
Trigger: ACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
3UTR CAA 72 bp ACTCTCCGACACTGTTGTCTCCAGGGTCACAGCCCCTaGCTGCATGGCCGCAGTGGCCACATTGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: TLRHCCLQGHSP*LHGRSGHIDGL
Trigger: GAGGCCATCAATGTGGCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCTGGAGACAACAGTGTCGGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp ATGGCCAGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGATCCAGCTGCACAGGCTaGCCATCCTCAAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: MARGPWNSQGQRDPLAHGSSCTG*PSSKER
Trigger: TCTCTCCTTTGAGGATGGTCAGCCTGTGCAGCTGGA...TCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCCACTGCGTCTGCACTaGAGCCCTCATCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSPLRLH*SPHHPL
Trigger: CAGAGGATGATGAGGGCTTCAGTGCAGACGCAGTGG...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACGGTTGGCATCAGAGCTaGCACAAGAGGCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNGWHQS*HKRLGL
Trigger: GAGACCCAGCCTCTTGTGTCAGCTCTGATGCCAACC...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp GTGCTGCCGTGCTGGGTGACCATACTGATGGCACTCCCCAGGGCCTGCAGGTCTCCATCGGAGTTATCCTaGAGGCCAGAAGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: VLPCWVTILMALPRACRSPSELS*RPEEAS
Trigger: TGAAGCCTCTTCTGGCCTTCAGGATAACTCCGATGG...AGACCTGCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACGGCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CACCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGAAGGGGAACAGACTaGGGGCCAGAAGGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: HLLCVSHSLGPWGQEWPCRRGTD*GPEGCS
Trigger: AGAACACCCTTCTGGCCCTCAGTCTGTTCCCCTTCT...GCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp CTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGGCCCCAATCTCTACCTaGGAAGGGGAACAGACTGAG +
Preference number: 4 (lower is better)
Translates to: LCVSHSLGPWGQEWPCRWAPIST*EGEQTE
Trigger: CTCAGTCTGTTCCCCTTCTCAGGTAGAGATTGGGGC...CCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCGGCCACCACTGCGTCTaGACTGAAGCCCTCATCATC +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSGHHCV*TEALII
Trigger: GATGATGAGGGCTTCAGTGCAGACGCAGTGGTGGCC...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGGCCACCACTGCGTCTaGACTGAAGCCCTCATCATC +
Preference number: 4 (lower is better)
Translates to: QLILRGGCPGVAWLLSAPGHHCV*TEALII
Trigger: GATGATGAGGGCTTCAGTGCAGACGCAGTGGTGGCC...GGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp AAGCTATCCGGGGTCGTTTGGGTGGCGGACTCTCCTCGGCTGCAGAGGCGGCCTGCTCTGTCTCCAACTTaGTGCCCTTTTCCATTACGG +
Preference number: 4 (lower is better)
Translates to: KLSGVVWVADSPRLQRRPALSPT*CPFPLR
Trigger: CCGTAATGGAAAAGGGCAGCAAGTTGGAGACAGAGC...AGGCCGCCTCTGCAGCCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CACCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCGTGTGGGTACGGACATaGTTCTGCAGGTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: HLLCVSHSLGPWGQEWPCVWVRT*FCRSPE
Trigger: CTCAGGAGACCTGCAGAAGCATGTCCGTACCCACAC...GCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGAGTCTTGCCGCAGGTGCTaGAGGTGTAGGGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LILRGGCPGVAWLLSAPESCRRC*RCRACS
Trigger: ACTGCAAGCCCTACACCTGCAGCACCTGCGGCAAGA...CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGCGGACTCTCCTCGGCTaGAGAGGCGGCCTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: PEGQKRLQHSASAKSEPERTLLG*RGGLKL
Trigger: CAACTTGAGGCCGCCTCTGCAGCCGAGGAGAGTCCG...CTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp TATCCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGCACTCCCCAGGGCCTaGAGGTCTTCCGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: YPEGQKRLQHSASAKSEPALPRA*RSSGDR
Trigger: CCTGTCCCCGGAAGACCTGCAGGCCCTGGGGAGTGC...AGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGGGCTGTGGCCAACAGTaGCACCTGTTGATGACGAAG +
Preference number: 4 (lower is better)
Translates to: LCVSHSLGPWGQEWPCRWGCGQQ*HLLMTK
Trigger: CTTCGTCATCAACAGGTGGCACTGTTGGCCACAGCC...CCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACGCCTCCTCTAAGGTCTaGTGTTCCTCCAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNASSKV*CSSSCG
Trigger: CCCACAGCTGGAGGAACAGCAGACCTTAGAGGAGGC...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCGGGCAAGAGTGGCCATaGAGATGGCACTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSGQEWP*RWHFLQ
Trigger: CTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCC...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGGGCAAGAGTGGCCATaGAGATGGCACTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QLILRGGCPGVAWLLSAPGQEWP*RWHFLQ
Trigger: CTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCC...GGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCAAGAGCGAGCCTGAGACAGATGCATGGATGCAGGAGGAAAGGGATCTGTCCTGGGCAGGACAGGGCCTaGTCCACTGCTACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRASLRQMHGCRRKGICPGQDRA*STATGL
Trigger: CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCC...AGGACAGATCCCTTTCCTCCTGCATCCATGCATCTGTCTCAGGCTCGCTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp TGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTCAGGAAGTCCCTGGTaGCAAGTAGCCAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: WALGGKSGHADGTSSSMVSGSPW*QVARHL
Trigger: GAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGA...CACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGTTCCTCCAGCTGCACTaGAATGTGCGTTCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: LCVSHSLGPWGQEWPCRWFLQLH*NVRSVG
Trigger: GCCAACGGAACGCACATTGCAGTGCAGCTGGAGGAA...CCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CACCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCTGCTGTTCCTCCAGCTaGACTGCAATGTGCGTTCCG +
Preference number: 4 (lower is better)
Translates to: HLLCVSHSLGPWGQEWPCCCSSS*TAMCVP
Trigger: CGGAACGCACATTGCAGTGCAGCTGGAGGAACAGCA...GCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp ATGATGAAGGGCTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGCCGAGGGACGCAGGCCCTaGGGCTTCGGTCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: MMKGLDHRWTAIGVILKAEGRRP*GFGLCP
Trigger: AGGACAGAGACCGAAGCCCCAGGGCCTGCGTCCCTC...GGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp GTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCATGAAGTTGGCTTCTaGCCAGCACCAAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: VSHSLGPWGQEWPCRWHFHEVGF*PAPRAT
Trigger: TGTGGCTCTTGGTGCTGGCCAGAAGCCAACTTCATG...GAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGAGGCCCCAAGCTCTCCATaGCAAACTGCTGCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: LILRGGCPGVAWLLSAPEAPSSP*QTAARA
Trigger: TGCACGAGCAGCAGTTTGCCATGGAGAGCTTGGGGC...CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCGCCCCAAGCTCTCCATaGCAAACTGCTGCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSAPSSP*QTAARA
Trigger: TGCACGAGCAGCAGTTTGCCATGGAGAGCTTGGGGC...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGGTCCCATCCTCGAGCTaGATCACCTGCCCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: WALGGKSGHADGTSSSMVVPSSS*ITCPSR
Trigger: TCTTGAAGGGCAGGTGATCCAGCTCGAGGATGGGAC...CACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCGTCCCATCCTCGAGCTaGATCACCTGCCCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPVPSSS*ITCPSR
Trigger: TCTTGAAGGGCAGGTGATCCAGCTCGAGGATGGGAC...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp AGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGGTCCCATCCTCGAGCTaGATCACCTGCCCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: RWLLLGGQDRACSTATGLVPSSS*ITCPSR
Trigger: TCTTGAAGGGCAGGTGATCCAGCTCGAGGATGGGAC...CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACGAGCCATCTTCCAGTTaGACGGCTTCCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNEPSSS*TASRVL
Trigger: CAGCACCCTGGAAGCCGTCCAACTGGAAGATGGCTC...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCTCTGTACGGCCAGGATaGTGCTCTCCGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: LGARVAMQMALPPAWCGTSVRPG*CSPMAQ
Trigger: CTGTGCCATCGGAGAGCACCATCCTGGCCGTACAGA...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTCCAGGAAAGCAGCCTaGTGTTGGGTTCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GGGYCWEGRTGPAPLLLGSRKAA*CWVPFR
Trigger: TCTGAAGGGAACCCAACACCAGGCTGCTTTCCTGGA...GCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACTGTGCATGGCCAAGGTaGAGGTCTGCCGGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNCAWPR*RSAGRS
Trigger: AGACCTACCGGCAGACCTCCACCTTGGCCATGCACA...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGCTATCCGGGGTCGTTTaGGTGGCGGACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PEGQKRLQHSASAKSEPELSGVV*VADSPR
Trigger: CCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAG...CTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp GGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTCATCGCCACCTGGGCTaGGATGTCATCTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GPLGARVAMQMALPPAWCHRHLG*DVISLF
Trigger: GAAGAGAGAGATGACATCCCAGCCCAGGTGGCGATG...ACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCGTCACCATCGCCACCTaGGCTGGGATGTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSVTIAT*AGMSSL
Trigger: GAGAGATGACATCCCAGCCCAGGTGGCGATGGTGAC...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCGTGGTGCTGCCGTGCTaGGTGACCATACTGATGGCA +
Preference number: 4 (lower is better)
Translates to: LGARVAMQMALPPAWCGTVVLPC*VTILMA
Trigger: TGCCATCAGTATGGTCACCCAGCACGGCAGCACCAC...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000373953.8
CDS-3UTR CCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACGCGTTCCGTTGGCTGTaGCCAACAGTGCCACCTGTT +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNAFRWL*PTVPPV
Trigger: AACAGGTGGCACTGTTGGCCACAGCCAACGGAACGC...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp AGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGCAATGTGCGTTCCGTTaGCTGTGGCCAACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: RWLLLGGQDRACSTATGLQCAFR*LWPTVP
Trigger: TGGCACTGTTGGCCACAGCCAACGGAACGCACATTG...CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp ATGGCCAGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGATCACGGAGGAAGGACTaGCTGAAGAGAACCGTGGTG +
Preference number: 4 (lower is better)
Translates to: MARGPWNSQGQRDPLAHGSRRKD*LKRTVV
Trigger: CACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGA...TCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CCA 90 bp CCAAGAGCGAGCCTGAGACAGATGCATGGATGCAGGAGGAAAGGGATCTGTCCTCACAGCCTGGGCCCTTaGGGGCAAGAGTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: PRASLRQMHGCRRKGICPHSLGP*GQEWPC
Trigger: GCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTG...AGGACAGATCCCTTTCCTCCTGCATCCATGCATCTGTCTCAGGCTCGCTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp AGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGGTGTCAGGAAGTCCCTaGTGCCAAGTAGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: RWLLLGGQDRACSTATGLVSGSP*CQVARH
Trigger: ATGCCTGGCTACTTGGCACCAGGGACTTCCTGACAC...CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACAGGAGTGGTGGGGGCTaGGCACCTTTTCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNRSGGG*APFLQP
Trigger: TGGCTGAAGAAAAGGTGCCCAGCCCCCACCACTCCT...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR CAA 72 bp CCACCGTCCACCTCATGCACAGGCTCTCCACCTCCTTaGGCTCAAGAAGCCCATGTCTGCCTCTATCCCACC +
Preference number: 4 (lower is better)
Translates to: PPSTSCTGSPPP*AQEAHVCLYPT
Trigger: GGTGGGATAGAGGCAGACATGGGCTTCTTGAGCCAAAGGAGGTGGAGAGCCTGTGCATGAGGTGGACGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 72 bp GTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTaGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VFFRRRVGAQLI*RGGCPGVAWLL
Trigger: CAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp GGTCCCAAACAGAACGAGAACCCTCCACCCTCAACTGGAAGCAGCCCACCAGGCCTTCCAGCCACCCCTTaGAGGAAGCAGTTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: GPKQNENPPPSTGSSPPGLPATP*RKQLQV
Trigger: TACCTGCAACTGCTTCCTTCAAGGGGTGGCTGGAAG...GCCTGGTGGGCTGCTTCCAGTTGAGGGTGGAGGGTTCTCGTTCTGTTTGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CCTCAGCCAAGAGCGAGCCTGAGACAGATGCATGGATGCAGGAGGAAAGGGATCGCAGGCCTTGCCTACTaGTCTTCCAGCCACCCCTTG +
Preference number: 4 (lower is better)
Translates to: PQPRASLRQMHGCRRKGIAGLAY*SSSHPL
Trigger: CAAGGGGTGGCTGGAAGATCAGTAGGCAAGGCCTGC...GATCCCTTTCCTCCTGCATCCATGCATCTGTCTCAGGCTCGCTCTTGGCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCTCGTGCACTCAGACATaGAGTTGGCTTCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSSCTQT*SWLLAS
Trigger: GCTGGCCAGAAGCCAACTTCATGTCTGAGTGCACGA...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp CTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGAGTCGTGCACTCAGACATaGAGTTGGCTTCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LILRGGCPGVAWLLSAPESCTQT*SWLLAS
Trigger: GCTGGCCAGAAGCCAACTTCATGTCTGAGTGCACGA...CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp CTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGAGTCCAGCTGCACAGGCTaGCCATCCTCAAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LILRGGCPGVAWLLSAPESSCTG*PSSKER
Trigger: TCTCTCCTTTGAGGATGGTCAGCCTGTGCAGCTGGA...CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp AGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGATGCTACACTTaGGTCCTCAGCCACCACAGC +
Preference number: 4 (lower is better)
Translates to: RWLLLGGQDRACSTATGLKRCYT*VLSHHS
Trigger: GCTGTGGTGGCTGAGGACTCAAGTGTAGCATCTCTT...CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp GTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCGGAATCTGGCTGTCATaGAGAACCTTGCTGGCATAC +
Preference number: 4 (lower is better)
Translates to: VSHSLGPWGQEWPCRWHFGIWLS*RTLLAY
Trigger: GTATGCCAGCAAGGTTCTTCATGACAGCCAGATTCC...GAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp ATGAAGGGCTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGCCAGAAGGCCCCGAGGGCTTTaGGTCATCACTTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: MKGLDHRWTAIGVILKARRPRGL*VITSAA
Trigger: GGCCGCAGAAGTGATGACGCAAAGCCCTCGGGGCCT...TCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp GTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAACACCTGGTGAATGTATaGGGTGGTCCCATCCTCGAG +
Preference number: 4 (lower is better)
Translates to: VVIAGRAGQGLLHCYWAEHLVNV*GGPILE
Trigger: CTCGAGGATGGGACCACCGCATACATTCACCAGGTG...TTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGAGCCTTCTCTGGGTGTaGGGTGTATGTAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQSLLWV*GVCKPC
Trigger: GCATGGCTTACATACACCGCACACCCAGAGAAGGCT...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp AGGACTGGGGATGGTGAGGGTGGTGCTGCCGTGCTGGGTGACCATACTGATGGCCCAGAGAGAGCACCCTaGAAGTCAGAGTACTCTGAC +
Preference number: 4 (lower is better)
Translates to: RTGDGEGGAAVLGDHTDGPERAP*KSEYSD
Trigger: GTCAGAGTACTCTGACTTGCAGGGTGCTCTCTCTGG...GCCATCAGTATGGTCACCCAGCACGGCAGCACCACCCTCACCATCCCCAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp ATGGCCGCAGTGGCCACATTGATGGCCTCCTCTAAGGTCTGCTGTTCCTCCAGCCAAGAAGCCCATGTCTaGCTCTATCCCACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: MAAVATLMASSKVCCSSSQEAHV*LYPTPA
Trigger: GGCAGGGGTGGGATAGAGGCAGACATGGGCTTCTTG...GCTGGAGGAACAGCAGACCTTAGAGGAGGCCATCAATGTGGCCACTGCGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGGTACGGACATGCTTCTaGAGGTCTCCTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQVRTCF*RSPEVL
Trigger: CAAGACCTCAGGAGACCTGCAGAAGCATGTCCGTAC...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCGTACGGACATGCTTCTaGAGGTCTCCTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPVRTCF*RSPEVL
Trigger: CAAGACCTCAGGAGACCTGCAGAAGCATGTCCGTAC...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCGGCTTGCAGTGTGTGTaGACCACGTGGTGCTTATAC +
Preference number: 4 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPGLQCV*TTWCLY
Trigger: GTATAAGCACCACGTGGTGCACACACACTGCAAGCC...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGGGCTTGCAGTGTGTGTaGACCACGTGGTGCTTATAC +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQGLQCV*TTWCLY
Trigger: GTATAAGCACCACGTGGTGCACACACACTGCAAGCC...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GCCAGAAGGGTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCTCTGCCGGTAGGTCTTaGCGCAGGTGCTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ARRVFFRRRVGAQLILRGSAGRS*RRCCRC
Trigger: ACACCTGCAGCACCTGCGGCAAGACCTACCGGCAGA...GCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACACCCTTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCGGCTGTGGCCAACAGTaGCACCTGTTGATGACGAAG +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSGCGQQ*HLLMTK
Trigger: CTTCGTCATCAACAGGTGGCACTGTTGGCCACAGCC...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCAGGGCAGGACAGGGCCTaGTCCACTGCTACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPGQDRA*STATGL
Trigger: CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCC...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp TCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGCAGGGAGGTGGTTATTaGTGGGAGGGCAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: SERPTCSRRKDWLKRTVVQGGGY*WEGRTG
Trigger: CCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTG...CACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACTCAGGAAGTCCCTGGTaGCAAGTAGCCAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNSGSPW*QVARHL
Trigger: GAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGA...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCGGTGAATGTAGGCAGTaGAGCCATCTTCCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: VSHSLGPWGQEWPCRWHFGECRQ*SHLPVG
Trigger: TCCAACTGGAAGATGGCTCCACTGCCTACATTCACC...GAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GTGCTGCCGTGCTGGGTGACCATACTGATGGCACTCCCCAGGGCCTGCAGGTCTAGGCCTTTCCACAGCTaGGGAAGTCACATCTGTATG +
Preference number: 4 (lower is better)
Translates to: VLPCWVTILMALPRACRSRPFHS*GSHICM
Trigger: CATACAGATGTGACTTCCCCAGCTGTGGAAAGGCCT...AGACCTGCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACGGCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp TCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGGTATGGCTTCTCCCCTaGGGACACTGGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SERPTCSRRKDWLKRTVVVWLLP*GHWAVW
Trigger: CCACACAGCCCAGTGTCCCCAGGGGAGAAGCCATAC...CACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCAGCCTCCAGCTCGCCGTaGGCACTGCGCTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPASSSP*ALRLCM
Trigger: CATGCACAAGCGCAGTGCCCACGGCGAGCTGGAGGC...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCATCGCCACCTGGGCTaGGATGTCATCTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSHRHLG*DVISLF
Trigger: GAAGAGAGAGATGACATCCCAGCCCAGGTGGCGATG...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCTATGTGTGCCAGATGTaGCCAGGTCGGCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSYVCQM*PGRHQD
Trigger: GTCCTGATGCCGACCTGGCCACATCTGGCACACATA...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000373953.8
CDS-3UTR CCA 90 bp TGCTTATACAAGCTCGAGTACTCGGTGAAGCGTTTCCCGCAGCCTGGCACCGTGCCCAAGCAAACCGCCTaGTCATACGGGCTGCGTCTG +
Preference number: 4 (lower is better)
Translates to: CLYKLEYSVKRFPQPGTVPKQTA*SYGLRL
Trigger: CAGACGCAGCCCGTATGACCAGGCGGTTTGCTTGGG...CACGGTGCCAGGCTGCGGGAAACGCTTCACCGAGTACTCGAGCTTGTATAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp GTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAACAATGTGCGTTCCGTTaGCTGTGGCCAACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VVIAGRAGQGLLHCYWAEQCAFR*LWPTVP
Trigger: TGGCACTGTTGGCCACAGCCAACGGAACGCACATTG...TTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCCCCAGAGACCTATGTaGCCACCTTCTATGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LCVSHSLGPWGQEWPCRWPQRPM*PPSMCQ
Trigger: CTGACACATAGAAGGTGGCCACATAGGTCTCTGGGG...CCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp AGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGCATGAAGAACCTTGCTaGCATACTGCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RWLLLGGQDRACSTATGLHEEPC*HTAPGP
Trigger: TGGCCCTGGAGCAGTATGCCAGCAAGGTTCTTCATG...CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCTCAGTCCATAGCCTGTaGCAAAGGCCTTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPSVHSL*QRPFHS
Trigger: GCTGTGGAAAGGCCTTTGCCACAGGCTATGGACTGA...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGGTGACGGGCTGCGTCTaGGTGCCATCGGCGCTGACC +
Preference number: 4 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQVTGCV*VPSALT
Trigger: GGTCAGCGCCGATGGCACCCAGACGCAGCCCGTCAC...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373953.8
CDS-3UTR TCA 90 bp GGTGTAGAGACGCCCACAGCCCTTGTAGCCACAGCGGAATGCTCTGTCTCCAACTCGTGCACTCAGACATaGAGTTGGCTTCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GVETPTALVATAECSVSNSCTQT*SWLLAS
Trigger: GCTGGCCAGAAGCCAACTTCATGTCTGAGTGCACGA...GTTGGAGACAGAGCATTCCGCTGTGGCTACAAGGGCTGTGGGCGTCTCTACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCGAAGCTTCTCTCCTTTaGCAGCTTGCTGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: LGARVAMQMALPPAWCGTEASLL*QLAGRR
Trigger: CCTACGTCCAGCAAGCTGTCAAAGGAGAGAAGCTTC...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp ACCTGTGGCAAAGGCCTTTCCACAGCTGGGGAAGTCACATCTGTATGGACGGTCAGCTCGAGTACTCGGTaGAGCGTTTCCCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TCGKGLSTAGEVTSVWTVSSSTR*SVSRSL
Trigger: CAGGCTGCGGGAAACGCTTCACCGAGTACTCGAGCT...GACCGTCCATACAGATGTGACTTCCCCAGCTGTGGAAAGGCCTTTGCCACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp GTGCACCACGTGGTGCTTATACAAGCTCGAGTACTCGGTGAAGCGTTTCCCGCATGCTGGGCACCATCCTaGGTGATCAGAGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: VHHVVLIQARVLGEAFPACWAPS*VIRATW
Trigger: CCAGGTGGCTCTGATCACTCAGGATGGTGCCCAGCA...TGCGGGAAACGCTTCACCGAGTACTCGAGCTTGTATAAGCACCACGTGGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCAAGAGATGCTACACTTaGGTCCTCAGCCACCACAGC +
Preference number: 4 (lower is better)
Translates to: QLILRGGCPGVAWLLSAPKRCYT*VLSHHS
Trigger: GCTGTGGTGGCTGAGGACTCAAGTGTAGCATCTCTT...GGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCCCCTTTATTCCTTGTTaGCTTCTCTGGCCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPPFIPC*LLWPWD
Trigger: ATCCCACGGCCAGAGAAGTCAACAAGGAATAAAGGG...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGATGCATGGATGCAGGAGGAACCCAGTGCCACACGCTaGGCACTTAGTAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HSASAKSEPETDAWMQEEPSATR*ALSRAP
Trigger: TGGAGCCCTACTAAGTGCTCAGCGTGTGGCACTGGG...TTCCTCCTGCATCCATGCATCTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp ATGAAGGGCTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGCCAGACGAAGCGCTTTAAGGTaGGCAGTCCGCAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: MKGLDHRWTAIGVILKARRSALR*AVRRPC
Trigger: GCAAGGCCTGCGGACTGCGCACCTTAAAGCGCTTCG...TCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCAGCCTTCTCTGGGTGTaGGGTGTATGTAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: QLILRGGCPGVAWLLSAPSLLWV*GVCKPC
Trigger: GCATGGCTTACATACACCGCACACCCAGAGAAGGCT...GGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp ACCTGTGGCAAAGGCCTTTCCACAGCTGGGGAAGTCACATCTGTATGGACGGTCGTACGGCCAGGATGGTaGTCTCCGATGGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: TCGKGLSTAGEVTSVWTVVRPGW*SPMAQP
Trigger: TGGCTGTGCCATCGGAGAGCACCATCCTGGCCGTAC...GACCGTCCATACAGATGTGACTTCCCCAGCTGTGGAAAGGCCTTTGCCACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp GGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGCTCTGTCTCCAACTTaGTGCCCTTTTCCATTACGG +
Preference number: 4 (lower is better)
Translates to: GPLGARVAMQMALPPAWCALSPT*CPFPLR
Trigger: CCGTAATGGAAAAGGGCAGCAAGTTGGAGACAGAGC...ACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCAAGAGCGAGCCTGAGACAGATGCATGGATGCAGGAGGAAAGGGATCTGTCCTCCTCCAGGCTCCTTCTaGTGGCCTGAACCATGCTGC +
Preference number: 4 (lower is better)
Translates to: PRASLRQMHGCRRKGICPPPGSF*WPEPCC
Trigger: GCAGCATGGTTCAGGCCAGCAGAAGGAGCCTGGAGG...AGGACAGATCCCTTTCCTCCTGCATCCATGCATCTGTCTCAGGCTCGCTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp GCCAGAAGGGTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCTCTCGCCTGTGTGGGTaGGCACATGTACCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: ARRVFFRRRVGAQLILRGSRLCG*AHVPCG
Trigger: TCCGCAAGGTACATGTGCGCACCCACACAGGCGAGA...GCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACACCCTTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp ACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGATCATCTACGTCAGCCTCCTCGCAGCCTGGCACCGTaGAAACGTATGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TEEGLAEENRGDHLRQPPRSLAP*KRMASP
Trigger: GGGAGAAGCCATACGTTTGCACGGTGCCAGGCTGCG...AGGAGGCTGACGTAGATGATCACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGGTGTGCACCACGTGGTaGTTATACAAGCTCGAGTAC +
Preference number: 4 (lower is better)
Translates to: LCVSHSLGPWGQEWPCRWVCTTW*LYKLEY
Trigger: GTACTCGAGCTTGTATAAGCACCACGTGGTGCACAC...CCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGTGTGCACCACGTGGTaGTTATACAAGCTCGAGTAC +
Preference number: 4 (lower is better)
Translates to: GPLGARVAMQMALPPAWCVCTTW*LYKLEY
Trigger: GTACTCGAGCTTGTATAAGCACCACGTGGTGCACAC...ACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GCCAGAAGGGTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCAGGGTGGTGCTGCCGTaGTGGGTGACCATACTGATG +
Preference number: 4 (lower is better)
Translates to: ARRVFFRRRVGAQLILRGRVVLP*WVTILM
Trigger: CATCAGTATGGTCACCCAGCACGGCAGCACCACCCT...GCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACACCCTTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000373953.8
CDS-3UTR GCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCAGGGTCACAGCCCCTTaGTGCATGGCCGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLRVTAP*CMAAVA
Trigger: GGCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCT...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GTGCACCACGTGGTGCTTATACAAGCTCGAGTACTCGGTGAAGCGTTTCCCGCACAGGGCCTGCTCCACTaGTACTGGGCTGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VHHVVLIQARVLGEAFPAQGLLH*YWAEEL
Trigger: CAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTG...TGCGGGAAACGCTTCACCGAGTACTCGAGCTTGTATAAGCACCACGTGGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGTGTCATGAAGAACCTTaGTGGCATACTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQCHEEP*WHTAPG
Trigger: CCCTGGAGCAGTATGCCAGCAAGGTTCTTCATGACA...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCTCTCCCCTGTGTGGATaGGCACGTGATTCTTATAGT +
Preference number: 4 (lower is better)
Translates to: VSHSLGPWGQEWPCRWHFSPLCG*ARDSYS
Trigger: ACTATAAGAATCACGTGCGCATCCACACAGGGGAGA...GAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GCCAGAAGGGTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCGCCCCAAGCTCTCCATaGCAAACTGCTGCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: ARRVFFRRRVGAQLILRGAPSSP*QTAARA
Trigger: TGCACGAGCAGCAGTTTGCCATGGAGAGCTTGGGGC...GCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACACCCTTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp AGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGGGTCATAGCCTTCTCTaGGTGTGCGGTGTATGTAAG +
Preference number: 4 (lower is better)
Translates to: RWLLLGGQDRACSTATGLGHSLL*VCGVCK
Trigger: CTTACATACACCGCACACCCAGAGAAGGCTATGACC...CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCAGGCCTTTCCACAGCTaGGGAAGTCACATCTGTATG +
Preference number: 4 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPRPFHS*GSHICM
Trigger: CATACAGATGTGACTTCCCCAGCTGTGGAAAGGCCT...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GCCAGAAGGGTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCCCCTCAAAAGGGCACTaGAACGGGCGTTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: ARRVFFRRRVGAQLILRGPSKGH*NGRSPV
Trigger: CACTGGTGAACGCCCGTTCCAGTGCCCTTTTGAGGG...GCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACACCCTTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp ATGATGAAGGGCTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGCCGGCCTCTCGCCTGTGTaGGTGCGCACATGTACCTTG +
Preference number: 4 (lower is better)
Translates to: MMKGLDHRWTAIGVILKAGLSPV*VRTCTL
Trigger: CAAGGTACATGTGCGCACCCACACAGGCGAGAGGCC...GGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGTGTGTGTGCACCACGTaGTGCTTATACAAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQCVCTT*CLYKLE
Trigger: CTCGAGCTTGTATAAGCACCACGTGGTGCACACACA...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GGTGTAGAGACGCCCACAGCCCTTGTAGCCACAGCGGAATGCTCTGTCTCCAACCATCGCCACCTGGGCTaGGATGTCATCTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GVETPTALVATAECSVSNHRHLG*DVISLF
Trigger: GAAGAGAGAGATGACATCCCAGCCCAGGTGGCGATG...GTTGGAGACAGAGCATTCCGCTGTGGCTACAAGGGCTGTGGGCGTCTCTACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGGTCACCATCGCCACCTaGGCTGGGATGTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: PEGQKRLQHSASAKSEPEVTIAT*AGMSSL
Trigger: GAGAGATGACATCCCAGCCCAGGTGGCGATGGTGAC...CTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp AGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGATATGGCCAGGGGGCCCTaGAATAGCCAGGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RETHLLTEEGLAEENRGDMARGP*NSQGQR
Trigger: TCTCTGACCCTGGCTATTCCAGGGCCCCCTGGCCAT...ATCACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CCA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCATGAAGAACCTTGCTaGCATACTGCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LGARVAMQMALPPAWCGTHEEPC*HTAPGP
Trigger: TGGCCCTGGAGCAGTATGCCAGCAAGGTTCTTCATG...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp GCCAGAAGGGTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCTCCAGCTGCACAGGCTaGCCATCCTCAAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ARRVFFRRRVGAQLILRGSSCTG*PSSKER
Trigger: TCTCTCCTTTGAGGATGGTCAGCCTGTGCAGCTGGA...GCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACACCCTTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCATCTGGGTCACAAATCTaGCAGCCCCCGAGGGCGACT +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPSGSQI*QPPRAT
Trigger: AGTCGCCCTCGGGGGCTGTCAGATTTGTGACCCAGA...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCTCGAGCTGGATCACCTaGCCTTCAAGAAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LGARVAMQMALPPAWCGTSSWIT*PSRSFS
Trigger: AGAGAAGCTTCTTGAAGGGCAGGTGATCCAGCTCGA...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCTCGAGCTGGATCACCTaGCCTTCAAGAAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QLILRGGCPGVAWLLSAPSSWIT*PSRSFS
Trigger: AGAGAAGCTTCTTGAAGGGCAGGTGATCCAGCTCGA...GGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCTGTCTCCAACTTGCTaGCCTTTTCCATTACGGGGA +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSLSPTC*PFPLRG
Trigger: TCCCCGTAATGGAAAAGGGCAGCAAGTTGGAGACAG...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACGCTCTGTCTCCAACTTaGTGCCCTTTTCCATTACGG +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNALSPT*CPFPLR
Trigger: CCGTAATGGAAAAGGGCAGCAAGTTGGAGACAGAGC...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCTCAGCCAAGAGCGAGCCTGAGACAGATGCATGGATGCAGGAGGAAAGGGATCGTGTGGGTACGGACATaGTTCTGCAGGTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PQPRASLRQMHGCRRKGIVWVRT*FCRSPE
Trigger: CTCAGGAGACCTGCAGAAGCATGTCCGTACCCACAC...GATCCCTTTCCTCCTGCATCCATGCATCTGTCTCAGGCTCGCTCTTGGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCATCTGCCGGTAGGTCTTaGCGCAGGTGCTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPSAGRS*RRCCRC
Trigger: ACACCTGCAGCACCTGCGGCAAGACCTACCGGCAGA...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGGGCTGTGGCCAACAGTaGCACCTGTTGATGACGAAG +
Preference number: 4 (lower is better)
Translates to: PEGQKRLQHSASAKSEPEGCGQQ*HLLMTK
Trigger: CTTCGTCATCAACAGGTGGCACTGTTGGCCACAGCC...CTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp AAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGACCTGCACTGCAATGTaGGTTCCGTTGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: KARRGFNILPQPRASLRQTCTAM*VPLAVA
Trigger: GGCCACAGCCAACGGAACGCACATTGCAGTGCAGGT...CTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp CCAAGAGCGAGCCTGAGACAGATGCATGGATGCAGGAGGAAAGGGATCTGTCCTACCTGCACTGCAATGTaGGTTCCGTTGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PRASLRQMHGCRRKGICPTCTAM*VPLAVA
Trigger: GGCCACAGCCAACGGAACGCACATTGCAGTGCAGGT...AGGACAGATCCCTTTCCTCCTGCATCCATGCATCTGTCTCAGGCTCGCTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACAGATCTCTACTCACCTaGACTGCAATGTGCGTTCCG +
Preference number: 4 (lower is better)
Translates to: QDRACSTATGLKSCLWLNRSLLT*TAMCVP
Trigger: CGGAACGCACATTGCAGTGCAGGTGAGTAGAGATCT...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp GCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACGGACCACAGGTGGACTaGCATCGGAGTTATCCTGAA +
Preference number: 4 (lower is better)
Translates to: ARVRETHLLTEEGLAEENGPQVD*HRSYPE
Trigger: TTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCC...GTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGAGGGTCACAGCCCCTTaGTGCATGGCCGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVRVTAP*CMAAVA
Trigger: GGCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCT...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCTGTCATGAAGAACCTTaGTGGCATACTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSCHEEP*WHTAPG
Trigger: CCCTGGAGCAGTATGCCAGCAAGGTTCTTCATGACA...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGATGCAATGATTGTGACGGGCTaGGTCTGGGTGCCATCGGCG +
Preference number: 4 (lower is better)
Translates to: QKRLQHSASAKSEPETDAMIVTG*VWVPSA
Trigger: CGCCGATGGCACCCAGACGCAGCCCGTCACAATCAT...TGCATCTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498555.1
CDS-3UTR CCA 90 bp GGTGTAGAGACGCCCACAGCCCTTGTAGCCACAGCGGAATGCTCTGTCTCCAACCATGAAGTTGGCTTCTaGCCAGCACCAAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: GVETPTALVATAECSVSNHEVGF*PAPRAT
Trigger: TGTGGCTCTTGGTGCTGGCCAGAAGCCAACTTCATG...GTTGGAGACAGAGCATTCCGCTGTGGCTACAAGGGCTGTGGGCGTCTCTACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGGTCATAGCCTTCTCTaGGTGTGCGGTGTATGTAAG +
Preference number: 4 (lower is better)
Translates to: QLILRGGCPGVAWLLSAPGHSLL*VCGVCK
Trigger: CTTACATACACCGCACACCCAGAGAAGGCTATGACC...GGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGAAGTCACATCTGTATaGACGGTCACCTGTATGAGC +
Preference number: 4 (lower is better)
Translates to: GPLGARVAMQMALPPAWCEVTSV*TVTCMS
Trigger: GCTCATACAGGTGACCGTCCATACAGATGTGACTTC...ACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGGAAGTCACATCTGTATaGACGGTCACCTGTATGAGC +
Preference number: 4 (lower is better)
Translates to: PSMCQPQPGPLGARVAMQEVTSV*TVTCMS
Trigger: GCTCATACAGGTGACCGTCCATACAGATGTGACTTC...CTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAAGGCCTTTCCACAGCTaGGGAAGTCACATCTGTATG +
Preference number: 4 (lower is better)
Translates to: VVIAGRAGQGLLHCYWAERPFHS*GSHICM
Trigger: CATACAGATGTGACTTCCCCAGCTGTGGAAAGGCCT...TTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CAGCCCTCTTGGACTCAGCAGCCACTCTCCGACACTGTTGTCTCCAGGGTCACAGCTCTCCACCTCCTTTaGCTCAAGAAGCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: QPSWTQQPLSDTVVSRVTALHLL*LKKPMS
Trigger: AGACATGGGCTTCTTGAGCCAAAGGAGGTGGAGAGC...TGTGACCCTGGAGACAACAGTGTCGGAGAGTGGCTGCTGAGTCCAAGAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCCTATCCGGGGTCGTTTaGGTGGCGGACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLLSGVV*VADSPR
Trigger: CCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAG...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGATGCGTTCCGTTGGCTGTaGCCAACAGTGCCACCTGTT +
Preference number: 4 (lower is better)
Translates to: GQKRLQHSASAKSEPETDAFRWL*PTVPPV
Trigger: AACAGGTGGCACTGTTGGCCACAGCCAACGGAACGC...ATCTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CCA 90 bp GGCCAGGTCGGCATCAGGACTGGGGATGGTGAGGGTGGTGCTGCCGTGCTGGGTATCTGTCCTCTGAAATaGGCTCTTTTTGAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: GQVGIRTGDGEGGAAVLGICPLK*ALFESD
Trigger: ATCTGACTCAAAAAGAGCCCATTTCAGAGGACAGAT...ACCCAGCACGGCAGCACCACCCTCACCATCCCCAGTCCTGATGCCGACCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp GCCCCTGAGGAATTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCTGCCCTGGTGTAGCCTaGCTGTTGTCAGCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: APEELIDCGVRKSLVPSSCPGVA*LLSAPE
Trigger: CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCA...GCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAATTCCTCAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGGTGTCAGGAAGTCCCTaGTGCCAAGTAGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: SERPTCSRRKDWLKRTVVVSGSP*CQVARH
Trigger: ATGCCTGGCTACTTGGCACCAGGGACTTCCTGACAC...CACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp AAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGAGGAGTGGTGGGGGCTaGGCACCTTTTCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KARRGFNILPQPRASLRQRSGGG*APFLQP
Trigger: TGGCTGAAGAAAAGGTGCCCAGCCCCCACCACTCCT...CTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCAGCAGCTGAGGAGTGGTaGGGGCTGGGCACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPAAEEW*GLGTFS
Trigger: AGAAAAGGTGCCCAGCCCCCACCACTCCTCAGCTGC...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp CTCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGATCATCTACGTCAGCCTTGTACCGTCACCTGGTaGATGTATGCGGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LTEEGLAEENRGDHLRQPCTVTW*MYAVVP
Trigger: TGGGACCACCGCATACATTCACCAGGTGACGGTACA...AGGCTGACGTAGATGATCACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp GCCAGAAGGGTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCGGACGGTCACCTGTATaGGCTCGTTCATGCACCTTT +
Preference number: 4 (lower is better)
Translates to: ARRVFFRRRVGAQLILRGGRSPV*ARSCTF
Trigger: AAAGGTGCATGAACGAGCTCATACAGGTGACCGTCC...GCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACACCCTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCAGCTCGAGTACTCGGTaGAGCGTTTCCCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLSSSTR*SVSRSL
Trigger: CAGGCTGCGGGAAACGCTTCACCGAGTACTCGAGCT...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp GACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGCCAGAAGAGGCTTCAACAGCCAAGAGCGAGCCTaGGACAGATGCATGGATGCA +
Preference number: 4 (lower is better)
Translates to: DHRWTAIGVILKARRGFNSQERA*DRCMDA
Trigger: TGCATCCATGCATCTGTCTCAGGCTCGCTCTTGGCT...GTTGAAGCCTCTTCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR TCA 90 bp AGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGATCATCAGAAGGGGAACAGACTaGGGGCCAGAAGGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: RPTCSRRKDWLKRTVVIIRRGTD*GPEGCS
Trigger: AGAACACCCTTCTGGCCCTCAGTCTGTTCCCCTTCT...GATGATCACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CCAAGAGCGAGCCTGAGACAGATGCATGGATGCAGGAGGAAAGGGATCTGTCCTGCCCCAATCTCTACCTaGGAAGGGGAACAGACTGAG +
Preference number: 4 (lower is better)
Translates to: PRASLRQMHGCRRKGICPAPIST*EGEQTE
Trigger: CTCAGTCTGTTCCCCTTCTCAGGTAGAGATTGGGGC...AGGACAGATCCCTTTCCTCCTGCATCCATGCATCTGTCTCAGGCTCGCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCACTAAGGGTCACCGTGTaGAGCCCCAAGCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPLRVTV*SPKLSM
Trigger: CATGGAGAGCTTGGGGCTGCACACGGTGACCCTTAG...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGGGACGGCTTCCAGGGTaGTGGGGTCATAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQGRLPG*WGHSLL
Trigger: GAGAAGGCTATGACCCCAGCACCCTGGAAGCCGTCC...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp AGTTATCCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGGCCCTCATCATCCTCTaGTGCCAGGTCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SYPEGQKRLQHSASAKSEALIIL*CQVLQA
Trigger: GGCTTGGAGGACCTGGCAGCAGAGGATGATGAGGGC...CTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp GCCCCTGAGGAATTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCTGGAAAAGCCCACTCTaGCCTGCTTCCCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: APEELIDCGVRKSLVPSSWKSPL*PASLSR
Trigger: CCTGGAGAGGGAAGCAGGGCAGAGTGGGCTTTTCCA...GCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAATTCCTCAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCTCTGCCGGTAGGTCTTaGCGCAGGTGCTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLSAGRS*RRCCRC
Trigger: ACACCTGCAGCACCTGCGGCAAGACCTACCGGCAGA...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGCGGACTCTCCTCGGCTaGAGAGGCGGCCTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVRTLLG*RGGLKL
Trigger: CAACTTGAGGCCGCCTCTGCAGCCGAGGAGAGTCCG...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp ATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGGTCTTCCATTCCACCTaGAGTATACTCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: IARVRETHLLTEEGLAEEVFHST*SILSLP
Trigger: GGGGAGGGAGAGTATACTGCAGGTGGAATGGAAGAC...CTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp AAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGGGCTGTGGCCAACAGTaGCACCTGTTGATGACGAAG +
Preference number: 4 (lower is better)
Translates to: KARRGFNILPQPRASLRQGCGQQ*HLLMTK
Trigger: CTTCGTCATCAACAGGTGGCACTGTTGGCCACAGCC...CTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp TCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGTCTACTCACCTGCACTaGAATGTGCGTTCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: SERPTCSRRKDWLKRTVVSTHLH*NVRSVG
Trigger: GCCAACGGAACGCACATTGCAGTGCAGGTGAGTAGA...CACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp ATGAAGGGCTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGCCAGATCAGAGAGACCCACTTaGTCACGGAGGAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: MKGLDHRWTAIGVILKARSERPT*SRRKDW
Trigger: CCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGA...TCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp AAAATGATGAAGGGCTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGTCACAGCCCCTTGCTaGATGGCCGCAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: KMMKGLDHRWTAIGVILKVTAPC*MAAVAT
Trigger: TGTGGCCACTGCGGCCATGCAGCAAGGGGCTGTGAC...CTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCATCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp AGTTATCCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGTCCCCTGATTCCAGCTaGCTGGCCCCCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SYPEGQKRLQHSASAKSESPDSS*LAPFLS
Trigger: GCTCAAGAAGGGGGCCAGGCAGCTGGAATCAGGGGA...CTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCTCTCCCCTGTGTGGATaGGCACGTGATTCTTATAGT +
Preference number: 4 (lower is better)
Translates to: LGARVAMQMALPPAWCGTSPLCG*ARDSYS
Trigger: ACTATAAGAATCACGTGCGCATCCACACAGGGGAGA...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGCCAGAAGAGGCTTCAAGGTGAATGTATGCGGTaGTCCCATCCTCGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GPQVDCHRSYPEGQKRLQGECMR*SHPRAG
Trigger: TCCAGCTCGAGGATGGGACCACCGCATACATTCACC...TTGAAGCCTCTTCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CATCTTCTTCAGTCACCATCGCCACCTGGGCTGGGATGTCATCTCTCTCTTCCTGAGCCATCTTCCAGTTaGACGGCTTCCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HLLQSPSPPGLGCHLSLPEPSSS*TASRVL
Trigger: CAGCACCCTGGAAGCCGTCCAACTGGAAGATGGCTC...AGGAAGAGAGAGATGACATCCCAGCCCAGGTGGCGATGGTGACTGAAGAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp ATGGCCGCAGTGGCCACATTGATGGCCTCCTCTAAGGTCTGCTGTTCCTCCAGCGGTGAATGTAGGCAGTaGAGCCATCTTCCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: MAAVATLMASSKVCCSSSGECRQ*SHLPVG
Trigger: TCCAACTGGAAGATGGCTCCACTGCCTACATTCACC...GCTGGAGGAACAGCAGACCTTAGAGGAGGCCATCAATGTGGCCACTGCGGCCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGAGGAAGTCACATCTGTATaGACGGTCACCTGTATGAGC +
Preference number: 4 (lower is better)
Translates to: LILRGGCPGVAWLLSAPEEVTSV*TVTCMS
Trigger: GCTCATACAGGTGACCGTCCATACAGATGTGACTTC...CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GCCCCTGAGGAATTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCGCTGACACAAGAGGCTaGGTCTCTCCACCAACCCTC +
Preference number: 4 (lower is better)
Translates to: APEELIDCGVRKSLVPSSADTRG*VSPPTL
Trigger: GAGGGTTGGTGGAGAGACCCAGCCTCTTGTGTCAGC...GCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAATTCCTCAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CATCTTCTTCAGTCACCATCGCCACCTGGGCTGGGATGTCATCTCTCTCTTCCTGGGCGTTCACCAGTGTaGGTACGGACATGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HLLQSPSPPGLGCHLSLPGRSPV*VRTCFC
Trigger: GCAGAAGCATGTCCGTACCCACACTGGTGAACGCCC...AGGAAGAGAGAGATGACATCCCAGCCCAGGTGGCGATGGTGACTGAAGAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGATGCATGTGCATGGCCAAGGTaGAGGTCTGCCGGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: QKRLQHSASAKSEPETDACAWPR*RSAGRS
Trigger: AGACCTACCGGCAGACCTCCACCTTGGCCATGCACA...TGCATCTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp AGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGATGCATCACTGCGCTTGTGCATaGCCAAGGTGGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RRGFNILPQPRASLRQMHHCACA*PRWRSA
Trigger: GGCAGACCTCCACCTTGGCCATGCACAAGCGCAGTG...ATGCATCTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp GCCCCTGAGGAATTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCGTGGTGCTGCCGTGCTaGGTGACCATACTGATGGCA +
Preference number: 4 (lower is better)
Translates to: APEELIDCGVRKSLVPSSVVLPC*VTILMA
Trigger: TGCCATCAGTATGGTCACCCAGCACGGCAGCACCAC...GCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAATTCCTCAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000373953.8
CDS-3UTR CCA 90 bp AGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGATCAATGTGCGTTCCGTTaGCTGTGGCCAACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: RETHLLTEEGLAEENRGDQCAFR*LWPTVP
Trigger: TGGCACTGTTGGCCACAGCCAACGGAACGCACATTG...ATCACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CCA 90 bp GTGCACCACGTGGTGCTTATACAAGCTCGAGTACTCGGTGAAGCGTTTCCCGCAGGCTTGGACCACAGGTaGACTGCCATCGGAGTTATC +
Preference number: 4 (lower is better)
Translates to: VHHVVLIQARVLGEAFPAGLDHR*TAIGVI
Trigger: GATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCC...TGCGGGAAACGCTTCACCGAGTACTCGAGCTTGTATAAGCACCACGTGGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp ATGATGAAGGGCTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGCCTCACGGAGGAAGGACTaGCTGAAGAGAACCGTGGTG +
Preference number: 4 (lower is better)
Translates to: MMKGLDHRWTAIGVILKASRRKD*LKRTVV
Trigger: CACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGA...GGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CCA 90 bp CATCGGAGTTATCCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGATGGCCAGGGGGCCCTaGAATAGCCAGGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: HRSYPEGQKRLQHSASAKMARGP*NSQGQR
Trigger: TCTCTGACCCTGGCTATTCCAGGGCCCCCTGGCCAT...CTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATAACTCCGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGGAGAGGCGGGTGCCCTaGTGTAGCCTGGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVERRVP*CSLAVV
Trigger: GACAACAGCCAGGCTACACCAGGGCACCCGCCTCTC...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GCCAGAAGGGTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCTCAGTCCATAGCCTGTaGCAAAGGCCTTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: ARRVFFRRRVGAQLILRGSVHSL*QRPFHS
Trigger: GCTGTGGAAAGGCCTTTGCCACAGGCTATGGACTGA...GCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACACCCTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp CATCGGAGTTATCCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGCCACTGCGTCTGCACTaGAGCCCTCATCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: HRSYPEGQKRLQHSASAKPLRLH*SPHHPL
Trigger: CAGAGGATGATGAGGGCTTCAGTGCAGACGCAGTGG...CTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATAACTCCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGCCACTGCGTCTGCACTaGAGCCCTCATCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQPLRLH*SPHHPL
Trigger: CAGAGGATGATGAGGGCTTCAGTGCAGACGCAGTGG...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGAGCTCGAGTACTCGGTaGAGCGTTTCCCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVSSSTR*SVSRSL
Trigger: CAGGCTGCGGGAAACGCTTCACCGAGTACTCGAGCT...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp ACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGATCATCTACGTCAGCCTCCTAAGAGATGCTACACTTaGGTCCTCAGCCACCACAGC +
Preference number: 4 (lower is better)
Translates to: TEEGLAEENRGDHLRQPPKRCYT*VLSHHS
Trigger: GCTGTGGTGGCTGAGGACTCAAGTGTAGCATCTCTT...AGGAGGCTGACGTAGATGATCACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR TCA 90 bp AAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGCCATCGGAGTTATCCTaGAGGCCAGAAGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KARRGFNILPQPRASLRQPSELS*RPEEAS
Trigger: TGAAGCCTCTTCTGGCCTTCAGGATAACTCCGATGG...CTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR TCA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGGTCAGCTCCCGAGGATaGTGCACTCCCCTGATTCCA +
Preference number: 4 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQVSSRG*CTPLIP
Trigger: TGGAATCAGGGGAGTGCATCATCCTCGGGAGCTGAC...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCGTCAGCTCCCGAGGATaGTGCACTCCCCTGATTCCA +
Preference number: 4 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLVSSRG*CTPLIP
Trigger: TGGAATCAGGGGAGTGCATCATCCTCGGGAGCTGAC...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGCCACTGCTACTGGGCTaGAGAGCTGTCTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQPLLLG*RAVCGS
Trigger: TGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGG...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp ATGAAGGGCTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGCCAGACTCTCCATGGCAAACTaGTGCTCGTGCACTCAGACA +
Preference number: 4 (lower is better)
Translates to: MKGLDHRWTAIGVILKARLSMAN*CSCTQT
Trigger: TGTCTGAGTGCACGAGCAGCAGTTTGCCATGGAGAG...TCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp AGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGATGCATGGATGCACCTGGTGAATGTATaGGGTGGTCCCATCCTCGAG +
Preference number: 4 (lower is better)
Translates to: RLQHSASAKSEPETDAWMHLVNV*GGPILE
Trigger: CTCGAGGATGGGACCACCGCATACATTCACCAGGTG...CATCCATGCATCTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCACACCTGGTGAATGTATaGGGTGGTCCCATCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPHLVNV*GGPILE
Trigger: CTCGAGGATGGGACCACCGCATACATTCACCAGGTG...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAATAAGCCCAGAGAGATaGAATGGCCCACCCAATAAT +
Preference number: 4 (lower is better)
Translates to: VVIAGRAGQGLLHCYWAEISPER*NGPPNN
Trigger: ATTATTGGGTGGGCCATTGCATCTCTCTGGGCTTAT...TTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp GCCCCTGAGGAATTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCGTGTGGGTACGGACATaGTTCTGCAGGTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: APEELIDCGVRKSLVPSSVWVRT*FCRSPE
Trigger: CTCAGGAGACCTGCAGAAGCATGTCCGTACCCACAC...GCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAATTCCTCAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACACTGGGCTGTGTGGATaGGCACGTGATTCTTATAGT +
Preference number: 4 (lower is better)
Translates to: ARVRETHLLTEEGLAEENTGLCG*ARDSYS
Trigger: ACTATAAGAATCACGTGCGCATCCACACAGCCCAGT...GTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp ACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGATCATCTACGTCAGCCTCCTTCTACTCACCTGCACTaGAATGTGCGTTCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: TEEGLAEENRGDHLRQPPSTHLH*NVRSVG
Trigger: GCCAACGGAACGCACATTGCAGTGCAGGTGAGTAGA...AGGAGGCTGACGTAGATGATCACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp TATCCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGGCTTCAACATTCTaGCTCAGCCAAGAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: YPEGQKRLQHSASAKSEPEASTF*LSQERA
Trigger: GGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTC...AGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp CCAAGAGCGAGCCTGAGACAGATGCATGGATGCAGGAGGAAAGGGATCTGTCCTGGACCACAGGTGGACTaGCATCGGAGTTATCCTGAA +
Preference number: 4 (lower is better)
Translates to: PRASLRQMHGCRRKGICPGPQVD*HRSYPE
Trigger: TTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCC...AGGACAGATCCCTTTCCTCCTGCATCCATGCATCTGTCTCAGGCTCGCTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp AGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGATGCATATTTTGAGAGGCGGGTaGCCTGGTGTAGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RRGFNILPQPRASLRQMHILRGG*PGVAWL
Trigger: CAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAAT...ATGCATCTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCATTTTGAGAGGCGGGTaGCCTGGTGTAGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLILRGG*PGVAWL
Trigger: CAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAAT...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCATTCCTCCAGCTGCACTaGAATGTGCGTTCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPFLQLH*NVRSVG
Trigger: GCCAACGGAACGCACATTGCAGTGCAGCTGGAGGAA...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TATCCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTTATGTGTGCCAGATGTaGCCAGGTCGGCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: YPEGQKRLQHSASAKSEPYVCQM*PGRHQD
Trigger: GTCCTGATGCCGACCTGGCCACATCTGGCACACATA...AGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CCA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCAGACCCCTTCTTTTGTaGGGAATCTTTGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: PADFERRVPWCSLAVVSSRPLLL*GIFVLV
Trigger: TACCAGGACAAAGATTCCCCACAAAAGAAGGGGTCT...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCGCGTTCCGTTGGCTGTaGCCAACAGTGCCACCTGTT +
Preference number: 4 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLAFRWL*PTVPPV
Trigger: AACAGGTGGCACTGTTGGCCACAGCCAACGGAACGC...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGATGCATGGATGCAGGGCTTGGACCACAGGTaGACTGCCATCGGAGTTATC +
Preference number: 4 (lower is better)
Translates to: LQHSASAKSEPETDAWMQGLDHR*TAIGVI
Trigger: GATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCC...CTGCATCCATGCATCTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCACTGAAGAGCTGTCTGTaGCTCAACCCTACAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPLKSCL*LNPTGP
Trigger: TGGCCCTGTAGGGTTGAGCCACAGACAGCTCTTCAG...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCAGTGTCAGGAAGTCCCTaGTGCCAAGTAGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPVSGSP*CQVARH
Trigger: ATGCCTGGCTACTTGGCACCAGGGACTTCCTGACAC...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGAGGAGTGGTGGGGGCTaGGCACCTTTTCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQRSGGG*APFLQP
Trigger: TGGCTGAAGAAAAGGTGCCCAGCCCCCACCACTCCT...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
3UTR CAA 72 bp ACATGCTTCTGCAGGTCTCCTGAGGTCTTGAAGGCCTaGCTGCACAGCTCCTCTGGGCACTTGTATGGTTTC +
Preference number: 4 (lower is better)
Translates to: TCFCRSPEVLKA*LHSSSGHLYGF
Trigger: GAAACCATACAAGTGCCCAGAGGAGCTGTGCAGCAAGGCCTTCAAGACCTCAGGAGACCTGCAGAAGCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCAGAAGCTTCTCTCCTTTaGCAGCTTGCTGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPEASLL*QLAGRR
Trigger: CCTACGTCCAGCAAGCTGTCAAAGGAGAGAAGCTTC...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCTGTACCGTCACCTGGTaGATGTATGCGGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLCTVTW*MYAVVP
Trigger: TGGGACCACCGCATACATTCACCAGGTGACGGTACA...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGCTTCTGCAGGTCTCCTaGGGTCTTGAAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQLLQVS*GLEGLA
Trigger: AGCAAGGCCTTCAAGACCTCAGGAGACCTGCAGAAG...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp CTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGCCAGAAGAGGCTTCCCTTTATTCCTTGTTaGCTTCTCTGGCCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: LGPQVDCHRSYPEGQKRLPFIPC*LLWPWD
Trigger: ATCCCACGGCCAGAGAAGTCAACAAGGAATAAAGGG...AAGCCTCTTCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR TCA 90 bp CAGATGCCCTTCTCTTCAAGATCCTCATCTAATTCCCCTTTATTCCTTGTTGACGCCTGGCCCCCTTCTTaGGCAGGGCCCCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: QMPFSSRSSSNSPLFLVDAWPPS*AGPPFP
Trigger: AGGGAATGGGGGCCCTGCTCAAGAAGGGGGCCAGGC...GTCAACAAGGAATAAAGGGGAATTAGATGAGGATCTTGAAGAGAAGGGCATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp GCCCCTGAGGAATTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCGTAGCCACAGCGGAATaGTCTGTCTCCAACTTGCTG +
Preference number: 4 (lower is better)
Translates to: APEELIDCGVRKSLVPSSVATAE*SVSNLL
Trigger: CAGCAAGTTGGAGACAGAGCATTCCGCTGTGGCTAC...GCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAATTCCTCAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GCCCCTGAGGAATTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCGTACGGACATGCTTCTaGAGGTCTCCTGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: APEELIDCGVRKSLVPSSVRTCF*RSPEVL
Trigger: CAAGACCTCAGGAGACCTGCAGAAGCATGTCCGTAC...GCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAATTCCTCAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGCCAGAAGAGGCTTGTGTGCACCACGTGGTaGTTATACAAGCTCGAGTAC +
Preference number: 4 (lower is better)
Translates to: LGPQVDCHRSYPEGQKRLVCTTW*LYKLEY
Trigger: GTACTCGAGCTTGTATAAGCACCACGTGGTGCACAC...AAGCCTCTTCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp AAAATGATGAAGGGCTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGAGGGTGGTGCTGCCGTaGTGGGTGACCATACTGATG +
Preference number: 4 (lower is better)
Translates to: KMMKGLDHRWTAIGVILKRVVLP*WVTILM
Trigger: CATCAGTATGGTCACCCAGCACGGCAGCACCACCCT...CTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCATCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp GGTGTAGAGACGCCCACAGCCCTTGTAGCCACAGCGGAATGCTCTGTCTCCAACTTTAAAGGTAAGAGCTaGTCATGGCCCAGGAACTGT +
Preference number: 4 (lower is better)
Translates to: GVETPTALVATAECSVSNFKGKS*SWPRNC
Trigger: ACAGTTCCTGGGCCATGAGCAGCTCTTACCTTTAAA...GTTGGAGACAGAGCATTCCGCTGTGGCTACAAGGGCTGTGGGCGTCTCTACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp TCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGATCATCTACGTCAGCCTCAGATCTCTACTCACCTaGACTGCAATGTGCGTTCCG +
Preference number: 4 (lower is better)
Translates to: SRRKDWLKRTVVIIYVSLRSLLT*TAMCVP
Trigger: CGGAACGCACATTGCAGTGCAGGTGAGTAGAGATCT...GAGGCTGACGTAGATGATCACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp GCCAGAAGGGTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCGTTAGGCAGTTTTCTTaGTGTCTTCTCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ARRVFFRRRVGAQLILRGVRQFS*CLLTPE
Trigger: CTCTGGGGTGAGAAGACAGCAAGAAAACTGCCTAAC...GCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACACCCTTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GCCCCTGAGGAATTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCATGAAGTTGGCTTCTaGCCAGCACCAAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: APEELIDCGVRKSLVPSSHEVGF*PAPRAT
Trigger: TGTGGCTCTTGGTGCTGGCCAGAAGCCAACTTCATG...GCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAATTCCTCAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCATTAAGTGATGAGCGGTaGTGTAGAGACGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPLSDER*CRDAHS
Trigger: GCTGTGGGCGTCTCTACACCACCGCTCATCACTTAA...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GCCCCTGAGGAATTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCTTAAGTGATGAGCGGTaGTGTAGAGACGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: APEELIDCGVRKSLVPSSLSDER*CRDAHS
Trigger: GCTGTGGGCGTCTCTACACCACCGCTCATCACTTAA...GCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAATTCCTCAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGGAGATGAGCACCCAGTaGGGTCTCATCCTCCACCGT +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVEMSTQ*GLILHR
Trigger: ACGGTGGAGGATGAGACCCCACTGGGTGCTCATCTC...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGGGGCGTTCACCAGTGTaGGTACGGACATGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVGRSPV*VRTCFC
Trigger: GCAGAAGCATGTCCGTACCCACACTGGTGAACGCCC...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TCCCTTCAGAGAGGTCCCAAACAGAACGAGAACCCTCCACCCTCAACTGGAAGCTGTGTGTGCACCACGTaGTGCTTATACAAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: SLQRGPKQNENPPPSTGSCVCTT*CLYKLE
Trigger: CTCGAGCTTGTATAAGCACCACGTGGTGCACACACA...GCTTCCAGTTGAGGGTGGAGGGTTCTCGTTCTGTTTGGGACCTCTCTGAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGGTCACCATCGCCACCTaGGCTGGGATGTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVVTIAT*AGMSSL
Trigger: GAGAGATGACATCCCAGCCCAGGTGGCGATGGTGAC...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGATGGACAGAAGTCCATaGAAAAGTGATTTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: LCVSHSLGPWGQEWPCRWMDRSP*KSDLPK
Trigger: CTTAGGCAAATCACTTTTCCATGGACTTCTGTCCAT...CCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CAGCCCTCTTGGACTCAGCAGCCACTCTCCGACACTGTTGTCTCCAGGGTCACACTCCAATTAAGGTGCTaGGAACAACCCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: QPSWTQQPLSDTVVSRVTLQLRC*EQPRRE
Trigger: TTCTCTTCTGGGTTGTTCCCAGCACCTTAATTGGAG...TGTGACCCTGGAGACAACAGTGTCGGAGAGTGGCTGCTGAGTCCAAGAGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CATCGGAGTTATCCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGCAATGTGCGTTCCGTTaGCTGTGGCCAACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: HRSYPEGQKRLQHSASAKQCAFR*LWPTVP
Trigger: TGGCACTGTTGGCCACAGCCAACGGAACGCACATTG...CTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATAACTCCGATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CCA 90 bp GAAGAAACAGAGACACAAAATGATGAAGGGCTTGGACCACAGGTGGACTGCCATGCCAGGCATCTCAGCTaGCCTCCAGGGAGGTGGTTA +
Preference number: 4 (lower is better)
Translates to: EETETQNDEGLGPQVDCHARHLS*PPGRWL
Trigger: TAACCACCTCCCTGGAGGCCAGCTGAGATGCCTGGC...ATGGCAGTCCACCTGTGGTCCAAGCCCTTCATCATTTTGTGTCTCTGTTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGCTTCTGCAGGTCTCCTaGGGTCTTGAAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVLLQVS*GLEGLA
Trigger: AGCAAGGCCTTCAAGACCTCAGGAGACCTGCAGAAG...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp TCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGAAGGGATCTGTCCTCTaGAATGGGCTCTTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: SERPTCSRRKDWLKRTVVKGSVL*NGLFLS
Trigger: ACTCAAAAAGAGCCCATTTCAGAGGACAGATCCCTT...CACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR TCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGAGAAGGGGAACAGACTaGGGGCCAGAAGGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVRRGTD*GPEGCS
Trigger: AGAACACCCTTCTGGCCCTCAGTCTGTTCCCCTTCT...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCAGGAATCTGGCTGTCATaGAGAACCTTGCTGGCATAC +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPGIWLS*RTLLAY
Trigger: GTATGCCAGCAAGGTTCTTCATGACAGCCAGATTCC...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp TATCCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTTCGAGCTGGATCACCTaGCCTTCAAGAAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: YPEGQKRLQHSASAKSEPSSWIT*PSRSFS
Trigger: AGAGAAGCTTCTTGAAGGGCAGGTGATCCAGCTCGA...AGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCACTGTCTCCAACTTGCTaGCCTTTTCCATTACGGGGA +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPLSPTC*PFPLRG
Trigger: TCCCCGTAATGGAAAAGGGCAGCAAGTTGGAGACAG...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCGTAGCCACAGCGGAATaGTCTGTCTCCAACTTGCTG +
Preference number: 4 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLVATAE*SVSNLL
Trigger: CAGCAAGTTGGAGACAGAGCATTCCGCTGTGGCTAC...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCGGCTTGCAGTGTGTGTaGACCACGTGGTGCTTATAC +
Preference number: 4 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLGLQCV*TTWCLY
Trigger: GTATAAGCACCACGTGGTGCACACACACTGCAAGCC...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp GGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGATTTGACTAGTTTAGGCTaGACTTTAATGCCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: GQKRLQHSASAKSEPETDLTSLG*TLMPAP
Trigger: TGGGGCGGGCATTAAAGTGCAGCCTAAACTAGTCAA...ATCTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTGCTGTTCCTCCAGCTaGACTGCAATGTGCGTTCCG +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVCCSSS*TAMCVP
Trigger: CGGAACGCACATTGCAGTGCAGCTGGAGGAACAGCA...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGGGTGAATGTATGCGGTaGTCCCATCCTCGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVGECMR*SHPRAG
Trigger: TCCAGCTCGAGGATGGGACCACCGCATACATTCACC...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TCATCTAATTCCCCTTTATTCCTTGTTGACTTCTCTGGCCGTGGGATCCCCTTTCGGCTTCCAGGGTGCTaGGGTCATAGCCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SSNSPLFLVDFSGRGIPFRLPGC*GHSLLW
Trigger: CCAGAGAAGGCTATGACCCCAGCACCCTGGAAGCCG...AAAGGGGATCCCACGGCCAGAGAAGTCAACAAGGAATAAAGGGGAATTAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp TCATCTAATTCCCCTTTATTCCTTGTTGACTTCTCTGGCCGTGGGATCCCCTTTGATGGTGCTCTCCGATaGCACAGCCACAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SSNSPLFLVDFSGRGIPFDGALR*HSHRVV
Trigger: CACCACCCTGTGGCTGTGCCATCGGAGAGCACCATC...AAAGGGGATCCCACGGCCAGAGAAGTCAACAAGGAATAAAGGGGAATTAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp GAGCCTGAGACAGATGCATGGATGCAGGAGGAAAGGGATCTGTCCTCTGAAATGAAAGCAGCCTGGTGTTaGGTTCCCTTCAGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: EPETDAWMQEERDLSSEMKAAWC*VPFREV
Trigger: GACCTCTCTGAAGGGAACCCAACACCAGGCTGCTTT...CATTTCAGAGGACAGATCCCTTTCCTCCTGCATCCATGCATCTGTCTCAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGGCTGCACAGCTCCTCTaGGCACTTGTATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQAAQLL*ALVWFL
Trigger: GAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGC...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGTCAGCCATGTGTGTGCACCACGTaGTGCTTATACAAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: LAVFSPQRPMWPPSMCQPCVCTT*CLYKLE
Trigger: CTCGAGCTTGTATAAGCACCACGTGGTGCACACACA...TGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp AAACAAATCAAACCCAATCCCCAGCAGTCTATGTACAGGGCCACTCCCTGCCTCCCCCAGAGACCTATGTaGCCACCTTCTATGTGTCAG +
Preference number: 4 (lower is better)
Translates to: KQIKPNPQQSMYRATPCLPQRPM*PPSMCQ
Trigger: CTGACACATAGAAGGTGGCCACATAGGTCTCTGGGG...GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGCTGAAGAGCTGTCTGTaGCTCAACCCTACAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVLKSCL*LNPTGP
Trigger: TGGCCCTGTAGGGTTGAGCCACAGACAGCTCTTCAG...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR TCA 90 bp AGTTATCCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGACCAAGAGCCACAGCTaGGGTCAGAGATTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SYPEGQKRLQHSASAKSETKSHS*GQRFPS
Trigger: AGAAGGAAATCTCTGACCTCAGCTGTGGCTCTTGGT...CTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp GGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGATAAGGGATCTGTCCTCTaGAATGGGCTCTTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: GQKRLQHSASAKSEPETDKGSVL*NGLFLS
Trigger: ACTCAAAAAGAGCCCATTTCAGAGGACAGATCCCTT...ATCTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGCTGTCTCCAACTTGCTaGCCTTTTCCATTACGGGGA +
Preference number: 4 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQLSPTC*PFPLRG
Trigger: TCCCCGTAATGGAAAAGGGCAGCAAGTTGGAGACAG...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR GCA 90 bp CTGAAGAGAACCGTGGTGATCATCTACGTCAGCCTCCTTCATTTCCAGATGAAGTCAGAGAGACCCACTTaGTCACGGAGGAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: LKRTVVIIYVSLLHFQMKSERPT*SRRKDW
Trigger: CCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGA...CTTCATCTGGAAATGAAGGAGGCTGACGTAGATGATCACCACGGTTCTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CCA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGGGTGAATGTAGGCAGTaGAGCCATCTTCCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQGECRQ*SHLPVG
Trigger: TCCAACTGGAAGATGGCTCCACTGCCTACATTCACC...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp CTGAAGAGAACCGTGGTGATCATCTACGTCAGCCTCCTTCATTTCCAGATGAAGTATGTGTGCCAGATGTaGCCAGGTCGGCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: LKRTVVIIYVSLLHFQMKYVCQM*PGRHQD
Trigger: GTCCTGATGCCGACCTGGCCACATCTGGCACACATA...CTTCATCTGGAAATGAAGGAGGCTGACGTAGATGATCACCACGGTTCTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR TCA 90 bp AAAATGATGAAGGGCTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGGAATCTGGCTGTCATaGAGAACCTGGGGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: KMMKGLDHRWTAIGVILKGIWLS*RTWGKS
Trigger: ACTTTTCCCCCAGGTTCTTCATGACAGCCAGATTCC...CTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCATCATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CTGAAGAGAACCGTGGTGATCATCTACGTCAGCCTCCTTCATTTCCAGATGAAGGTAGCCACAGCGGAATaGTCTGTCTCCAACTTGCTG +
Preference number: 4 (lower is better)
Translates to: LKRTVVIIYVSLLHFQMKVATAE*SVSNLL
Trigger: CAGCAAGTTGGAGACAGAGCATTCCGCTGTGGCTAC...CTTCATCTGGAAATGAAGGAGGCTGACGTAGATGATCACCACGGTTCTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp GAAGAGAACCGTGGTGATCATCTACGTCAGCCTCCTTCATTTCCAGATGAAGAATCAGGAAGTCCCTGGTaGCAAGTAGCCAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: EENRGDHLRQPPSFPDEESGSPW*QVARHL
Trigger: GAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGA...TTCTTCATCTGGAAATGAAGGAGGCTGACGTAGATGATCACCACGGTTCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGGGTCATAGCCTTCTCTaGGTGTGCGGTGTATGTAAG +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVGHSLL*VCGVCK
Trigger: CTTACATACACCGCACACCCAGAGAAGGCTATGACC...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp GGTCCCAAACAGAACGAGAACCCTCCACCCTCAACTGGAAGCAGCCCACCAGGCAACTTAGAGAACTCATaGCTAAAGGTACTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: GPKQNENPPPSTGSSPPGNLENS*LKVLVS
Trigger: TGAAACTAGTACCTTTAGCCATGAGTTCTCTAAGTT...GCCTGGTGGGCTGCTTCCAGTTGAGGGTGGAGGGTTCTCGTTCTGTTTGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp AGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGATCAACCCAGAAGAGAATaGATAAAACCGTATGGGTCA +
Preference number: 4 (lower is better)
Translates to: RETHLLTEEGLAEENRGDQPRRE*IKPYGS
Trigger: TGACCCATACGGTTTTATCCATTCTCTTCTGGGTTG...ATCACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp TCATCTAATTCCCCTTTATTCCTTGTTGACTTCTCTGGCCGTGGGATCCCCTTTGGACGGTCACCTGTATaGGCTCGTTCATGCACCTTT +
Preference number: 4 (lower is better)
Translates to: SSNSPLFLVDFSGRGIPFGRSPV*ARSCTF
Trigger: AAAGGTGCATGAACGAGCTCATACAGGTGACCGTCC...AAAGGGGATCCCACGGCCAGAGAAGTCAACAAGGAATAAAGGGGAATTAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR TCA 90 bp AGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGATGCATGAAATGGGCTCTTTTTaGGTCAGATGCCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RRGFNILPQPRASLRQMHEMGSF*VRCPSL
Trigger: AAGAGAAGGGCATCTGACTCAAAAAGAGCCCATTTC...ATGCATCTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR TCA 90 bp CATCGGAGTTATCCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGGAAATGGGCTCTTTTTaGGTCAGATGCCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: HRSYPEGQKRLQHSASAKEMGSF*VRCPSL
Trigger: AAGAGAAGGGCATCTGACTCAAAAAGAGCCCATTTC...CTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATAACTCCGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR GCA 90 bp AAAATGATGAAGGGCTTGGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGTTAGGCAGTTTTCTTaGTGTCTTCTCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: KMMKGLDHRWTAIGVILKVRQFS*CLLTPE
Trigger: CTCTGGGGTGAGAAGACAGCAAGAAAACTGCCTAAC...CTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCATCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR GCA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGGTTAGGCAGTTTTCTTaGTGTCTTCTCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QFSCCLLTPETYVATFYVVRQFS*CLLTPE
Trigger: CTCTGGGGTGAGAAGACAGCAAGAAAACTGCCTAAC...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CCA 90 bp TCATCTAATTCCCCTTTATTCCTTGTTGACTTCTCTGGCCGTGGGATCCCCTTTCCCCAGAGACCTATGTaGCCACCTTCTATGTGTCAG +
Preference number: 4 (lower is better)
Translates to: SSNSPLFLVDFSGRGIPFPQRPM*PPSMCQ
Trigger: CTGACACATAGAAGGTGGCCACATAGGTCTCTGGGG...AAAGGGGATCCCACGGCCAGAGAAGTCAACAAGGAATAAAGGGGAATTAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 72 bp CTTCAAGATCCTCATCTAATTCCCCTTTATTCCTTGTaGACTTCTCTGGCCGTGGGATCCCCTTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LQDPHLIPLYSL*TSLAVGSPFLP
Trigger: TGGGAGGAAAGGGGATCCCACGGCCAGAGAAGTCAACAAGGAATAAAGGGGAATTAGATGAGGATCTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 72 bp CAGATGAAGAAACAGAGACACAAAATGATGAAGGGCTaGGACCACAGGTGGACTGCCATCGGAGTTATCCTG +
Preference number: 4 (lower is better)
Translates to: QMKKQRHKMMKG*DHRWTAIGVIL
Trigger: CAGGATAACTCCGATGGCAGTCCACCTGTGGTCCAAGCCCTTCATCATTTTGTGTCTCTGTTTCTTCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR TCA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGTTAGAAAGTGTCTCTTaGCCTCCATTCAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQLESVS*PPFNCF
Trigger: AAAGCAGTTGAATGGAGGTCAAGAGACACTTTCTAA...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp GCCCCTGAGGAATTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCATGGATAAAACCGTATaGGTCAGATTAATTAGCCTG +
Preference number: 4 (lower is better)
Translates to: APEELIDCGVRKSLVPSSMDKTV*VRLISL
Trigger: CAGGCTAATTAATCTGACCCATACGGTTTTATCCAT...GCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAATTCCTCAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CCA 90 bp AGTTATCCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGATCTGTCCTCTGAAATaGGCTCTTTTTGAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: SYPEGQKRLQHSASAKSEICPLK*ALFESD
Trigger: ATCTGACTCAAAAAGAGCCCATTTCAGAGGACAGAT...CTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CCA 90 bp AAGAAACTTAGAGAACTCATGGCTAAAGGTACTAGTTTCACAGAGGGGAAAATATGCCCTGGTGTAGCCTaGCTGTTGTCAGCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: KKLRELMAKGTSFTEGKICPGVA*LLSAPE
Trigger: CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCA...TATTTTCCCCTCTGTGAAACTAGTACCTTTAGCCATGAGTTCTCTAAGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 72 bp CACTTGAAAATGGACAGAAGTCCATGGAAAAGTGATTaGCCTAAGGTTGCACAACAAATCAGGGTTGAATTG +
Preference number: 4 (lower is better)
Translates to: HLKMDRSPWKSD*PKVAQQIRVEL
Trigger: CAATTCAACCCTGATTTGTTGTGCAACCTTAGGCAAATCACTTTTCCATGGACTTCTGTCCATTTTCAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 72 bp GATTTGCCTAAGGTTGCACAACAAATCAGGGTTGAATaGAGATTTAGAAAGTGTCTCTTGACCTCCATTCAA +
Preference number: 4 (lower is better)
Translates to: DLPKVAQQIRVE*RFRKCLLTSIQ
Trigger: TTGAATGGAGGTCAAGAGACACTTTCTAAATCTCAATTCAACCCTGATTTGTTGTGCAACCTTAGGCAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
3UTR CAA 72 bp CAAATCAGGGTTGAATTGAGATTTAGAAAGTGTCTCTaGACCTCCATTCAACTGCTTTTAAAGGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: QIRVELRFRKCL*TSIQLLLKVRA
Trigger: AGCTCTTACCTTTAAAAGCAGTTGAATGGAGGTCAAGAGACACTTTCTAAATCTCAATTCAACCCTGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS GCA 90 bp CGTGAGGAGGTGGCGGAGGCCCCGAGGGCTTTGCGTCATCACTTCTaGGGCCTGCGGGCGAGAAGGTGCGCTTCGGGAGTAGCGCGGGAG +
Preference number: 5 (lower is better)
Translates to: REEVAEAPRALRHHF*GLRARRCASGVARE
Trigger: CTCCCGCGCTACTCCCGAAGCGCACCTTCTCGCCCGCAGGCCGCAGAAGTGATGACGCAAAGCCCTCGGGGCCTCCGCCACCTCCTCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000491400.5
CDS GCA 90 bp CGGTCCAGCAGAAGCGTGAGGAGGTGGCGGAGGCCCCGAGGGCTTTaGGTCATCACTTCTGCGGCCTGCGGGCGAGAAGGTGCGCTTCGG +
Preference number: 5 (lower is better)
Translates to: RSSRSVRRWRRPRGL*VITSAACGREGALR
Trigger: CCGAAGCGCACCTTCTCGCCCGCAGGCCGCAGAAGTGATGACGCAAAGCCCTCGGGGCCTCCGCCACCTCCTCACGCTTCTGCTGGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000491400.5
CDS CCA 90 bp GCTTCGCCGCGGCAGCCATCCAACTTATCCTGGTTCCGGGGCTCCTaGAGCCCAGGCGGCCGGGATCTGAACCGAGCTCTTCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: ASPRQPSNLSWFRGS*SPGGRDLNRALRSP
Trigger: GGGGCTCCGAAGAGCTCGGTTCAGATCCCGGCCGCCTGGGCTCCAGGAGCCCCGGAACCAGGATAAGTTGGATGGCTGCCGCGGCGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469195.5
ENST00000486891.5
CDS-3UTR CAA 90 bp GTGCTGCCGTGCTGGGTGACCATACTGATGGCACTCCCCAGGGCCTGCAGGTCTCCACAGCCTGGGCCCTaGGGGGCAAGAGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: VLPCWVTILMALPRACRSPQPGP*GARVAM
Trigger: CATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGG...AGACCTGCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACGGCAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp GTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCCGTGGGCACTGCGCTaGTGCATGGCCAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: VSHSLGPWGQEWPCRWHFPWALR*CMAKVE
Trigger: CTCCACCTTGGCCATGCACAAGCGCAGTGCCCACGG...GAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp AGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGCCACAGCCTGGGCCCTaGGGGGCAAGAGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: RWLLLGGQDRACSTATGLPQPGP*GARVAM
Trigger: CATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGG...CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS TCA 90 bp CCCCTGTGTGGATGCGCACGTGATTCTTATAGTTGGTGGCGCTGGTaGAGCCGCGGCCACAGTGGGGCTCCGGGCAGGTGTAGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: PLCGCARDSYSWWRW*SRGHSGAPGRCRAS
Trigger: AGAGGCCCTACACCTGCCCGGAGCCCCACTGTGGCCGCGGCTTCACCAGCGCCACCAACTATAAGAATCACGTGCGCATCCACACAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339411.5
ENST00000373953.8
ENST00000469195.5
CDS GCA 90 bp GCAGGCCAGGCCCGGTTGTCTAGAGTGACAGACCGTGTCACGCTGTaGGTGCTCACCTTGCTGGCATACTGCTCCAGGGCCACCACTGCG +
Preference number: 5 (lower is better)
Translates to: AGQARLSRVTDRVTL*VLTLLAYCSRATTA
Trigger: CGCAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGTGAGCACGCACAGCGTGACACGGTCTGTCACTCTAGACAACCGGGCCTGGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491400.5
CDS-3UTR CAA 90 bp AGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGGAGGCCCCGAGGGCTTaGCGTCATCACTTCTGCGGC +
Preference number: 5 (lower is better)
Translates to: RWLLLGGQDRACSTATGLEAPRA*RHHFCG
Trigger: GCCGCAGAAGTGATGACGCAAAGCCCTCGGGGCCTC...CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp TGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCGCTATCCGGGGTCGTTaGGGTGGCGGACTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: WGQEWPCRWHFLQHGVGPAIRGR*GGGLSS
Trigger: CGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGC...GGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCAGGGTCACAGCCCCTaGCTGCATGGCCGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: LGARVAMQMALPPAWCGTQGHSP*LHGRSG
Trigger: GCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCTG...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS TCA 90 bp CACCTGTGTGGATGCGCACGTGATTCTTATAGTTGGTGGCGCTGGTaGAGCCGCGGCCACAGTGGGGCTCCGGGCAGGTGTAGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: HLCGCARDSYSWWRW*SRGHSGAPGRCRAS
Trigger: AGAGGCCCTACACCTGCCCGGAGCCCCACTGTGGCCGCGGCTTCACCAGCGCCACCAACTATAAGAATCACGTGCGCATCCACACAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS TCA 90 bp GCAGGGCCAAGAGGCAGTGCGCAGGCCAGGCCCGGTTGTCTAGAGTaGCAGACCGTGTCACGCTGTGCGTGCTCACCTTGCTGGCATACT +
Preference number: 5 (lower is better)
Translates to: AGPRGSAQARPGCLE*QTVSRCACSPCWHT
Trigger: AGTATGCCAGCAAGGTGAGCACGCACAGCGTGACACGGTCTGTCACTCTAGACAACCGGGCCTGGCCTGCGCACTGCCTCTTGGCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491400.5
CDS CCA 90 bp CGCGCGATATCCAGGTTCCAGGGCCGCCGCACTTTCCTTTCCTCTTaGCGCGCCTCTACCGGGCCCCGGAACCCGTATAGAAAATACCGG +
Preference number: 5 (lower is better)
Translates to: RAISRFQGRRTFLSS*RASTGPRNPYRKYR
Trigger: CCGGTATTTTCTATACGGGTTCCGGGGCCCGGTAGAGGCGCGCCAAGAGGAAAGGAAAGTGCGGCGGCCCTGGAACCTGGATATCGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460229.1
ENST00000469195.5
ENST00000484932.5
ENST00000486891.5
CDS-3UTR CAA 90 bp GGTAAGCTATCCGGGGTCGTTTGGGTGGCGGACTCTCCTCGGCTGCAGAGGCGGGGCTCTCCACCTCCTTaGGCTCAAGAAGCCCATGTC +
Preference number: 5 (lower is better)
Translates to: GKLSGVVWVADSPRLQRRGSPPP*AQEAHV
Trigger: GACATGGGCTTCTTGAGCCAAAGGAGGTGGAGAGCC...CCGCCTCTGCAGCCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGCTTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp GGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCGAGGTCTTGAAGGCCTaGCTGCACAGCTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GGGYCWEGRTGPAPLLLGEVLKA*LHSSSG
Trigger: CCCAGAGGAGCTGTGCAGCAAGGCCTTCAAGACCTC...GCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp GCCAGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAGCAATGTGCGTTCCGTaGGCTGTGGCCAACAGTGCC +
Preference number: 5 (lower is better)
Translates to: ARGPWNSQGQRDPLAHGGAMCVP*AVANSA
Trigger: GGCACTGTTGGCCACAGCCAACGGAACGCACATTGC...TCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CAA 90 bp GGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCGCCGCAGTGGCCACATaGATGGCCTCCTCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: GGGYCWEGRTGPAPLLLGAAVAT*MASSKV
Trigger: GACCTTAGAGGAGGCCATCAATGTGGCCACTGCGGC...GCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp GGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCCACTCTCCGACACTGTaGTCTCCAGGGTCACAGCCC +
Preference number: 5 (lower is better)
Translates to: GGGYCWEGRTGPAPLLLGHSPTL*SPGSQP
Trigger: GGGCTGTGACCCTGGAGACAACAGTGTCGGAGAGTG...GCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCGGCGCCCAGCTGATTTaGAGAGGCGGGTGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: PADFERRVPWCSLAVVSSGAQLI*RGGCPG
Trigger: ACCAGGGCACCCGCCTCTCAAAATCAGCTGGGCGCC...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp TGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGCCAGGGAGGTGGTTATaGCTGGGAGGGCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: WALGGKSGHADGTSSSMVPGRWL*LGGQDR
Trigger: CCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGG...CACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS GCA 90 bp CTGCCAGGTCCTCCAAGCCCACCTCTGTCTGTACGGCCAGGATGGTaGTCTCCGATGGCACAGCCACAGGGTGGTGAATGTAGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LPGPPSPPLSVRPGW*SPMAQPQGGECRQW
Trigger: CCACTGCCTACATTCACCACCCTGTGGCTGTGCCATCGGAGAGCACCATCCTGGCCGTACAGACAGAGGTGGGCTTGGAGGACCTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS CCA 90 bp CTGCTGCCAGGTCCTCCAAGCCCACCTCTGTCTGTACGGCCAGGATaGTGCTCTCCGATGGCACAGCCACAGGGTGGTGAATGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: LLPGPPSPPLSVRPG*CSPMAQPQGGECRQ
Trigger: CTGCCTACATTCACCACCCTGTGGCTGTGCCATCGGAGAGCACCATCCTGGCCGTACAGACAGAGGTGGGCTTGGAGGACCTGGCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS-3UTR CAA 90 bp GGTCCCAAACAGAACGAGAACCCTCCACCCTCAACTGGAAGCAGCCCACCAGGCCGCAGTCCGCAGGCCTaGCCTACTGATCTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GPKQNENPPPSTGSSPPGRSPQA*PTDLPA
Trigger: GGCTGGAAGATCAGTAGGCAAGGCCTGCGGACTGCG...GCCTGGTGGGCTGCTTCCAGTTGAGGGTGGAGGGTTCTCGTTCTGTTTGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp AGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGGGAGCCATCTTCCAGTaGGACGGCTTCCAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: RWLLLGGQDRACSTATGLGAIFQ*DGFQGA
Trigger: AGCACCCTGGAAGCCGTCCAACTGGAAGATGGCTCC...CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp ATGGCCAGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGAGGTCTTGAAGGCCTaGCTGCACAGCTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: MARGPWNSQGQRDPLAHGEVLKA*LHSSSG
Trigger: CCCAGAGGAGCTGTGCAGCAAGGCCTTCAAGACCTC...TCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp GGTGTAGAGACGCCCACAGCCCTTGTAGCCACAGCGGAATGCTCTGTCTCCAACCCGTGGGCACTGCGCTaGTGCATGGCCAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GVETPTALVATAECSVSNPWALR*CMAKVE
Trigger: CTCCACCTTGGCCATGCACAAGCGCAGTGCCCACGG...GTTGGAGACAGAGCATTCCGCTGTGGCTACAAGGGCTGTGGGCGTCTCTACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp CACCTTCTATGTGTCAGCCACAGCCTGGGCCCTTGGGGGCAAGAGTGGCCATGCGCAATGTGCGTTCCGTaGGCTGTGGCCAACAGTGCC +
Preference number: 5 (lower is better)
Translates to: HLLCVSHSLGPWGQEWPCAMCVP*AVANSA
Trigger: GGCACTGTTGGCCACAGCCAACGGAACGCACATTGC...GCATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGGCTGACACATAGAAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp AGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGGCCGCAGTGGCCACATaGATGGCCTCCTCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: RWLLLGGQDRACSTATGLAAVAT*MASSKV
Trigger: GACCTTAGAGGAGGCCATCAATGTGGCCACTGCGGC...CAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp GCCAGAAGGGTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCCCACAGCCTGGGCCCTaGGGGGCAAGAGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: ARRVFFRRRVGAQLILRGPQPGP*GARVAM
Trigger: CATGGCCACTCTTGCCCCCAAGGGCCCAGGCTGTGG...GCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACACCCTTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS GCA 90 bp GCGCGCTCAGCACTCACTGTCTTACGGTCCCGAAGCGCTTTAAGGTaGGCAGTCCGCAGGCCTTGCCTACTGATCTTCCAGCCACCCCTT +
Preference number: 5 (lower is better)
Translates to: ARSALTVLRSRSALR*AVRRPCLLIFQPPL
Trigger: AAGGGGTGGCTGGAAGATCAGTAGGCAAGGCCTGCGGACTGCGCACCTTAAAGCGCTTCGGGACCGTAAGACAGTGAGTGCTGAGCGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000491400.5
CDS GCA 90 bp GTGACAGACCGTGTCACGCTGTGCGTGCTCACCTTGCTGGCATACTaGTCCAGGGCCACCACTGCGTCTGCACTGAAGCCCTCATCATCC +
Preference number: 5 (lower is better)
Translates to: VTDRVTLCVLTLLAY*SRATTASALKPSSS
Trigger: GGATGATGAGGGCTTCAGTGCAGACGCAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGTGAGCACGCACAGCGTGACACGGTCTGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491400.5
CDS CCA 90 bp AATCTGTCCATTCCAAGGATTCGGTCCAGCAGAAGCGTGAGGAGGTaGCGGAGGCCCCGAGGGCTTTGCGTCATCACTTCTGCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: NLSIPRIRSSRSVRR*RRPRGLCVITSAAC
Trigger: GCAGGCCGCAGAAGTGATGACGCAAAGCCCTCGGGGCCTCCGCCACCTCCTCACGCTTCTGCTGGACCGAATCCTTGGAATGGACAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000491400.5
CDS-3UTR CAA 90 bp GTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGGAGCCATCTTCCAGTaGGACGGCTTCCAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: VVIAGRAGQGLLHCYWAEGAIFQ*DGFQGA
Trigger: AGCACCCTGGAAGCCGTCCAACTGGAAGATGGCTCC...TTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp GTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGGTCTTGAAGGCCTaGCTGCACAGCTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: VVIAGRAGQGLLHCYWAEEVLKA*LHSSSG
Trigger: CCCAGAGGAGCTGTGCAGCAAGGCCTTCAAGACCTC...TTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp GCTGGCCTCCAGGGAGGTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCAGTGCGCACATGTACCTaGCGGATGTTAGATGTGGTG +
Preference number: 5 (lower is better)
Translates to: AGLQGGGYCWEGRTGPAPVRTCT*RMLDVV
Trigger: CACCACATCTAACATCCGCAAGGTACATGTGCGCAC...TGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGGAGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCAGAGGCGGCCTCAAGTaGCTGCTGCTCATAGAGGGC +
Preference number: 5 (lower is better)
Translates to: PADFERRVPWCSLAVVSSRGGLK*LLLIEG
Trigger: GCCCTCTATGAGCAGCAGCAACTTGAGGCCGCCTCT...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp ATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGGCTATCCGGGGTCGTTaGGGTGGCGGACTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: IARVRETHLLTEEGLAEEAIRGR*GGGLSS
Trigger: CGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGC...CTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp GCCAGAAGGGTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCGCTATCCGGGGTCGTTaGGGTGGCGGACTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: ARRVFFRRRVGAQLILRGAIRGR*GGGLSS
Trigger: CGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGC...GCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACACCCTTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp CTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGAGGCAATGTGCGTTCCGTaGGCTGTGGCCAACAGTGCC +
Preference number: 5 (lower is better)
Translates to: LILRGGCPGVAWLLSAPEAMCVP*AVANSA
Trigger: GGCACTGTTGGCCACAGCCAACGGAACGCACATTGC...CTCGGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp GTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAACACTCTCCGACACTGTaGTCTCCAGGGTCACAGCCC +
Preference number: 5 (lower is better)
Translates to: VVIAGRAGQGLLHCYWAEHSPTL*SPGSQP
Trigger: GGGCTGTGACCCTGGAGACAACAGTGTCGGAGAGTG...TTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS TCA 90 bp GAATATCCCACATGGTGCCCAAGCACAGGGCTGCCCTTGTCCTCTTaGGAGGTGAAGTTCTGGCAGGGCCAAGAGGCAGTGCGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: EYPTWCPSTGLPLSS*EVKFWQGQEAVRRP
Trigger: TGGCCTGCGCACTGCCTCTTGGCCCTGCCAGAACTTCACCTCTCAAGAGGACAAGGGCAGCCCTGTGCTTGGGCACCATGTGGGATATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491400.5
CDS GCA 90 bp GTGGGGGCTGTCAGGCTTCCCTCGACAAGGCATGGTGTGTTGGGGTaGCCTCACCTTTCTGTACCGTCACCTGGTGAATGTATGCGGTGG +
Preference number: 5 (lower is better)
Translates to: VGAVRLPSTRHGVLG*PHLSVPSPGECMRW
Trigger: CCACCGCATACATTCACCAGGTGACGGTACAGAAAGGTGAGGGCACCCCAACACACCATGCCTTGTCGAGGGAAGCCTGACAGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS CCA 90 bp TGGTGCTCTCCGATGGCACAGCCACAGGGTGGTGAATGTAGGCAGTaGAGCCATCTTCCAGTTGGACGGCTTCCAGGGTGCTGGGGTCAT +
Preference number: 5 (lower is better)
Translates to: WCSPMAQPQGGECRQ*SHLPVGRLPGCWGH
Trigger: ATGACCCCAGCACCCTGGAAGCCGTCCAACTGGAAGATGGCTCCACTGCCTACATTCACCACCCTGTGGCTGTGCCATCGGAGAGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000460229.1
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS CCA 90 bp CTCCAAGCCCACCTCTGTCTGTACGGCCAGGATGGTGCTCTCCGATaGCACAGCCACAGGGTGGTGAATGTAGGCAGTGGAGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: LQAHLCLYGQDGALR*HSHRVVNVGSGAIF
Trigger: GAAGATGGCTCCACTGCCTACATTCACCACCCTGTGGCTGTGCCATCGGAGAGCACCATCCTGGCCGTACAGACAGAGGTGGGCTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000460229.1
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS-3UTR CAA 90 bp TGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGCCTCTCCAGGAGCAGTaGGAGCCATACCAGAACATG +
Preference number: 5 (lower is better)
Translates to: WALGGKSGHADGTSSSMVPLQEQ*EPYQNM
Trigger: CATGTTCTGGTATGGCTCCAACTGCTCCTGGAGAGG...CACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp CAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGTCAGAGAGACCCACTaGCTCACGGAGGAAGGACTG +
Preference number: 5 (lower is better)
Translates to: QLILRGGCPGVAWLLSAPVRETH*LTEEGL
Trigger: CAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGAC...GGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp GGGTCTCATCCTCCACCGTCCACCTCATGCACAGGCTCTCCACCTCCTTTGGCTGGTGTAGCCTGGCTGTaGTCAGCTCCCGAGGATGAT +
Preference number: 5 (lower is better)
Translates to: GSHPPPSTSCTGSPPPLAGVAWL*SAPEDD
Trigger: ATCATCCTCGGGAGCTGACAACAGCCAGGCTACACC...AGCCAAAGGAGGTGGAGAGCCTGTGCATGAGGTGGACGGTGGAGGATGAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCGGTGTAGCCTGGCTGTaGTCAGCTCCCGAGGATGAT +
Preference number: 5 (lower is better)
Translates to: PADFERRVPWCSLAVVSSGVAWL*SAPEDD
Trigger: ATCATCCTCGGGAGCTGACAACAGCCAGGCTACACC...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp CAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAAGAGCTGTCTGTGGCTCAACGGTGTAGCCTGGCTGTaGTCAGCTCCCGAGGATGAT +
Preference number: 5 (lower is better)
Translates to: QDRACSTATGLKSCLWLNGVAWL*SAPEDD
Trigger: ATCATCCTCGGGAGCTGACAACAGCCAGGCTACACC...GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS TCA 90 bp GGGTCACAAATCTGTCCATTCCAAGGATTCGGTCCAGCAGAAGCGTaGGGAGGTGGCGGAGGCCCCGAGGGCTTTGCGTCATCACTTCTG +
Preference number: 5 (lower is better)
Translates to: GSQICPFQGFGPAEA*GGGGGPEGFASSLL
Trigger: CAGAAGTGATGACGCAAAGCCCTCGGGGCCTCCGCCACCTCCTCACGCTTCTGCTGGACCGAATCCTTGGAATGGACAGATTTGTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000491400.5
CDS TCA 90 bp GCATGGTGTGTTGGGGTGCCCTCACCTTTCTGTACCGTCACCTGGTaGATGTATGCGGTGGTCCCATCCTCGAGCTGGATCACCTGCCCT +
Preference number: 5 (lower is better)
Translates to: AWCVGVPSPFCTVTW*MYAVVPSSSWITCP
Trigger: AGGGCAGGTGATCCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGTGACGGTACAGAAAGGTGAGGGCACCCCAACACACCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS GCA 90 bp GTCTTACGGTCCCGAAGCGCTTTAAGGTGCGCAGTCCGCAGGCCTTaGCTACTGATCTTCCAGCCACCCCTTGAAGGAAGCAGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: VLRSRSALRCAVRRP*LLIFQPPLEGSSCR
Trigger: CCTGCAACTGCTTCCTTCAAGGGGTGGCTGGAAGATCAGTAGGCAAGGCCTGCGGACTGCGCACCTTAAAGCGCTTCGGGACCGTAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000491400.5
CDS CCA 90 bp CCTTGGTGGGGGCTGTCAGGCTTCCCTCGACAAGGCATGGTGTGTTaGGGTGCCCTCACCTTTCTGTACCGTCACCTGGTGAATGTATGC +
Preference number: 5 (lower is better)
Translates to: PWWGLSGFPRQGMVC*GALTFLYRHLVNVC
Trigger: GCATACATTCACCAGGTGACGGTACAGAAAGGTGAGGGCACCCCAACACACCATGCCTTGTCGAGGGAAGCCTGACAGCCCCCACCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS-3UTR CAA 90 bp GGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTCTCTCCTTTGACAGCTaGCTGGACGTAGGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: GPLGARVAMQMALPPAWCLSFDS*LDVGCC
Trigger: ACAACAGCCTACGTCCAGCAAGCTGTCAAAGGAGAG...ACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp TGCTTATACAAGCTCGAGTACTCGGTGAAGCGTTTCCCGCAGCCTGGCACCGTGGCCGCAGTGGCCACATaGATGGCCTCCTCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: CLYKLEYSVKRFPQPGTVAAVAT*MASSKV
Trigger: GACCTTAGAGGAGGCCATCAATGTGGCCACTGCGGC...CACGGTGCCAGGCTGCGGGAAACGCTTCACCGAGTACTCGAGCTTGTATAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGCAGGGTCACAGCCCCTaGCTGCATGGCCGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQQGHSP*LHGRSG
Trigger: GCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCTG...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS TCA 90 bp GGAATGTGTCTTAGATGGGAAGCCTACAGTAGAGGGGTTGGGGCCTaGGTGAGGGTAGTCCTCGCATGCCAGCTAGCCCACCTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: GMCLRWEAYSRGVGA*VRVVLACQLAHLCG
Trigger: TCCACACAGGTGGGCTAGCTGGCATGCGAGGACTACCCTCACTCAGGCCCCAACCCCTCTACTGTAGGCTTCCCATCTAAGACACATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS GCA 90 bp CTGACCATCCTCAAAGGAGAGAGCTTCTGTAACGAGAGCAATGCCTaGCTTTCCCTGGAGCTCAGTGCCATGGAGGGGTCCCTTGGTGGG +
Preference number: 5 (lower is better)
Translates to: LTILKGESFCNESNA*LSLELSAMEGSLGG
Trigger: CCCACCAAGGGACCCCTCCATGGCACTGAGCTCCAGGGAAAGGCAGGCATTGCTCTCGTTACAGAAGCTCTCTCCTTTGAGGATGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS CCA 90 bp GACCAGCCTGGAATGGCTGGCACAGAAGGGTTCTGGGCTGGGAGTTaGGAATGTGTCTTAGATGGGAAGCCTACAGTAGAGGGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: DQPGMAGTEGFWAGS*ECVLDGKPTVEGLG
Trigger: CCCCAACCCCTCTACTGTAGGCTTCCCATCTAAGACACATTCCCAACTCCCAGCCCAGAACCCTTCTGTGCCAGCCATTCCAGGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS CCA 90 bp ACCCCCAGACCAGCCTGGAATGGCTGGCACAGAAGGGTTCTGGGCTaGGAGTTGGGAATGTGTCTTAGATGGGAAGCCTACAGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: TPRPAWNGWHRRVLG*ELGMCLRWEAYSRG
Trigger: CCCTCTACTGTAGGCTTCCCATCTAAGACACATTCCCAACTCCCAGCCCAGAACCCTTCTGTGCCAGCCATTCCAGGCTGGTCTGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS-3UTR CAA 90 bp GTGGTTATTGCTGGGAGGGCAGGACAGGGCCTGCTCCACTGCTACTGGGCTGAACACTCAGACATGAAGTaGGCTTCTGGCCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: VVIAGRAGQGLLHCYWAEHSDMK*ASGQHQ
Trigger: TTGGTGCTGGCCAGAAGCCAACTTCATGTCTGAGTG...TTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCTCTCCTTTGACAGCTaGCTGGACGTAGGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: LGARVAMQMALPPAWCGTLSFDS*LDVGCC
Trigger: ACAACAGCCTACGTCCAGCAAGCTGTCAAAGGAGAG...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp GGACCACAGGTGGACTGCCATCGGAGTTATCCTGAAGGCCAGAAGAGGCTTCAAGGAGCCATCTTCCAGTaGGACGGCTTCCAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: GPQVDCHRSYPEGQKRLQGAIFQ*DGFQGA
Trigger: AGCACCCTGGAAGCCGTCCAACTGGAAGATGGCTCC...TTGAAGCCTCTTCTGGCCTTCAGGATAACTCCGATGGCAGTCCACCTGTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp GCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACGAAAGCAGCCTGGTGTaGGGTTCCCTTCAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: ARVRETHLLTEEGLAEENESSLV*GSLQRG
Trigger: ACCTCTCTGAAGGGAACCCAACACCAGGCTGCTTTC...GTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp TTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTGGGACCCTGAACCATGCTGCCTaGCACTCCCGTAACAAGGTT +
Preference number: 5 (lower is better)
Translates to: LGARVAMQMALPPAWCGTLNHAA*HSRNKV
Trigger: AACCTTGTTACGGGAGTGCAAGGCAGCATGGTTCAG...GGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp CCAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCAGCTCCTCTGGGCACTaGTATGGTTTCTCACCAGTG +
Preference number: 5 (lower is better)
Translates to: PADFERRVPWCSLAVVSSSSSGH*YGFSPV
Trigger: CACTGGTGAGAAACCATACAAGTGCCCAGAGGAGCT...GGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp CAGCTGATTTTGAGAGGCGGGTGCCCTGGTGTAGCCTGGCTGTTGTCAGCTCCCGTGCGCACATGTACCTaGCGGATGTTAGATGTGGTG +
Preference number: 5 (lower is better)
Translates to: QLILRGGCPGVAWLLSAPVRTCT*RMLDVV
Trigger: CACCACATCTAACATCCGCAAGGTACATGTGCGCAC...GGGAGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp GGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGTCAACAGTGCCACCTGTaGATGACGAAGAGATGCTAC +
Preference number: 5 (lower is better)
Translates to: GPLGARVAMQMALPPAWCQQCHL*MTKRCY
Trigger: GTAGCATCTCTTCGTCATCAACAGGTGGCACTGTTG...ACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp TGGGCCCTTGGGGGCAAGAGTGGCCATGCAGATGGCACTTCCTCCAGCATGGTGCAACAGTGCCACCTGTaGATGACGAAGAGATGCTAC +
Preference number: 5 (lower is better)
Translates to: WALGGKSGHADGTSSSMVQQCHL*MTKRCY
Trigger: GTAGCATCTCTTCGTCATCAACAGGTGGCACTGTTG...CACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp GCCAGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAATTCCCCTTTATTCCTaGTTGACTTCTCTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: ARGPWNSQGQRDPLAHGGIPLYS*LTSLAV
Trigger: CACGGCCAGAGAAGTCAACAAGGAATAAAGGGGAAT...TCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CAA 90 bp TGGCCAGGGGGCCCTGGAATAGCCAGGGTCAGAGAGACCCACTTGCTCACGGAGATTCCCCTTTATTCCTaGTTGACTTCTCTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: WPGGPGIARVRETHLLTEIPLYS*LTSLAV
Trigger: CACGGCCAGAGAAGTCAACAAGGAATAAAGGGGAAT...CTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGCTATTCCAGGGCCCCCTGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CAA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGCAGGGTCACAGCCCCTaGCTGCATGGCCGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: QFSCCLLTPETYVATFYVQGHSP*LHGRSG
Trigger: GCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCTG...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS GCA 90 bp TGTTGGGGTGCCCTCACCTTTCTGTACCGTCACCTGGTGAATGTATaGGGTGGTCCCATCCTCGAGCTGGATCACCTGCCCTTCAAGAAG +
Preference number: 5 (lower is better)
Translates to: CWGALTFLYRHLVNV*GGPILELDHLPFKK
Trigger: CTTCTTGAAGGGCAGGTGATCCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGTGACGGTACAGAAAGGTGAGGGCACCCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS CCA 90 bp GGGTGCCCTCACCTTTCTGTACCGTCACCTGGTGAATGTATGCGGTaGTCCCATCCTCGAGCTGGATCACCTGCCCTTCAAGAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GCPHLSVPSPGECMR*SHPRAGSPALQEAS
Trigger: AGAAGCTTCTTGAAGGGCAGGTGATCCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGTGACGGTACAGAAAGGTGAGGGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS CCA 90 bp ACCCTACCCCCAGACCAGCCTGGAATGGCTGGCACAGAAGGGTTCTaGGCTGGGAGTTGGGAATGTGTCTTAGATGGGAAGCCTACAGTA +
Preference number: 5 (lower is better)
Translates to: TLPPDQPGMAGTEGF*AGSWECVLDGKPTV
Trigger: TACTGTAGGCTTCCCATCTAAGACACATTCCCAACTCCCAGCCCAGAACCCTTCTGTGCCAGCCATTCCAGGCTGGTCTGGGGGTAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS CCA 90 bp GAGTTGTTCTGGGGATACCCTACCCCCAGACCAGCCTGGAATGGCTaGCACAGAAGGGTTCTGGGCTGGGAGTTGGGAATGTGTCTTAGA +
Preference number: 5 (lower is better)
Translates to: ELFWGYPTPRPAWNG*HRRVLGWELGMCLR
Trigger: TCTAAGACACATTCCCAACTCCCAGCCCAGAACCCTTCTGTGCCAGCCATTCCAGGCTGGTCTGGGGGTAGGGTATCCCCAGAACAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS-3UTR CAA 90 bp TCCCTTCAGAGAGGTCCCAAACAGAACGAGAACCCTCCACCCTCAACTGGAAGCCCTGGGGGAAAAGTCTaGCTGGCATACTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SLQRGPKQNENPPPSTGSPGGKV*LAYCSR
Trigger: CCTGGAGCAGTATGCCAGCAAGACTTTTCCCCCAGG...GCTTCCAGTTGAGGGTGGAGGGTTCTCGTTCTGTTTGGGACCTCTCTGAAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp GCCAGGGTCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACAGCTCCTCTGGGCACTaGTATGGTTTCTCACCAGTG +
Preference number: 5 (lower is better)
Translates to: ARVRETHLLTEEGLAEENSSSGH*YGFSPV
Trigger: CACTGGTGAGAAACCATACAAGTGCCCAGAGGAGCT...GTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGACCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGCCGTGGGCACTGCGCTaGTGCATGGCCAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: QFSCCLLTPETYVATFYVPWALR*CMAKVE
Trigger: CTCCACCTTGGCCATGCACAAGCGCAGTGCCCACGG...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp CCAAGAGCGAGCCTGAGACAGATGCATGGATGCAGGAGGAAAGGGATCTGTCCTGTCAGAGAGACCCACTaGCTCACGGAGGAAGGACTG +
Preference number: 5 (lower is better)
Translates to: PRASLRQMHGCRRKGICPVRETH*LTEEGL
Trigger: CAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGAC...AGGACAGATCCCTTTCCTCCTGCATCCATGCATCTGTCTCAGGCTCGCTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CAA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGGGCGCCCAGCTGATTTaGAGAGGCGGGTGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: QFSCCLLTPETYVATFYVGAQLI*RGGCPG
Trigger: ACCAGGGCACCCGCCTCTCAAAATCAGCTGGGCGCC...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp AGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGATGCATCCAGGGAGGTGGTTATaGCTGGGAGGGCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: RRGFNILPQPRASLRQMHPGRWL*LGGQDR
Trigger: CCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGG...ATGCATCTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGCCAGGGAGGTGGTTATaGCTGGGAGGGCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQPGRWL*LGGQDR
Trigger: CCTGTCCTGCCCTCCCAGCAATAACCACCTCCCTGG...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS TCA 90 bp GGGTTGGGGAAGATGGCCAGTGGAACACAGAGAGGACACAGGTGTTaGACCACTGAATCCAGAGACAAGGCGGAAAGGAAACGGGGGACA +
Preference number: 5 (lower is better)
Translates to: GLGKMASGTQRGHRC*TTESRDKAERKRGT
Trigger: TGTCCCCCGTTTCCTTTCCGCCTTGTCTCTGGATTCAGTGGTTCAACACCTGTGTCCTCTCTGTGTTCCACTGGCCATCTTCCCCAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479226.1
CDS GCA 90 bp TGCTGGGGTCATAGCCTTCTCTGGGTGTGCGGTGTATGTAAGCCATaGTGCCATCTTCCAGCTGCACAGGCTGACCATCCTCAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: CWGHSLLWVCGVCKP*CHLPAAQADHPQRR
Trigger: TCTCCTTTGAGGATGGTCAGCCTGTGCAGCTGGAAGATGGCAGCATGGCTTACATACACCGCACACCCAGAGAAGGCTATGACCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000460229.1
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS CCA 90 bp AGGGAGGGAGAGGGACTGAGACCTGAGACTCTGAATGGACAGGGTTaGGGAAGATGGCCAGTGGAACACAGAGAGGACACAGGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: REGEGLRPETLNGQG*GRWPVEHREDTGVE
Trigger: TTCAACACCTGTGTCCTCTCTGTGTTCCACTGGCCATCTTCCCCAACCCTGTCCATTCAGAGTCTCAGGTCTCAGTCCCTCTCCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479226.1
CDS-3UTR CAA 90 bp AAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGTCTTCCAGCCACCCCTaGAAGGAAGCAGTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: KARRGFNILPQPRASLRQSSSHP*KEAVAG
Trigger: ACCTGCAACTGCTTCCTTCAAGGGGTGGCTGGAAGA...CTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp GCCAGAAGGGTGTTCTTTAGGAGGAGAGTGGGCGCCCAGCTGATTTTGAGAGGCAGCTCCTCTGGGCACTaGTATGGTTTCTCACCAGTG +
Preference number: 5 (lower is better)
Translates to: ARRVFFRRRVGAQLILRGSSSGH*YGFSPV
Trigger: CACTGGTGAGAAACCATACAAGTGCCCAGAGGAGCT...GCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGAACACCCTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp AGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCCTGAGACAGATGCATAGAGGCGGCCTCAAGTaGCTGCTGCTCATAGAGGGC +
Preference number: 5 (lower is better)
Translates to: RRGFNILPQPRASLRQMHRGGLK*LLLIEG
Trigger: GCCCTCTATGAGCAGCAGCAACTTGAGGCCGCCTCT...ATGCATCTGTCTCAGGCTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp TTAATTGACTGTGGTGTCAGGAAGTCCCTGGTGCCAAGTAGCCAGGCATCTCAGAGAGGCGGCCTCAAGTaGCTGCTGCTCATAGAGGGC +
Preference number: 5 (lower is better)
Translates to: LIDCGVRKSLVPSSQASQRGGLK*LLLIEG
Trigger: GCCCTCTATGAGCAGCAGCAACTTGAGGCCGCCTCT...CTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp AAGCTATCCGGGGTCGTTTGGGTGGCGGACTCTCCTCGGCTGCAGAGGCGGCCTTTTAGAAAGTGTCTCTaGACCTCCATTCAACTGCTT +
Preference number: 5 (lower is better)
Translates to: KLSGVVWVADSPRLQRRPFRKCL*TSIQLL
Trigger: AAGCAGTTGAATGGAGGTCAAGAGACACTTTCTAAA...AGGCCGCCTCTGCAGCCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS TCA 90 bp TGTGGCCAACAGTGCCACCTGTTGATGACGAAGAGATGCTACACTTaGGTCCTCAGCCACCACAGCCCCAGAGGTAATGATTGTGACGGG +
Preference number: 5 (lower is better)
Translates to: CGQQCHLLMTKRCYT*VLSHHSPRGNDCDG
Trigger: CCCGTCACAATCATTACCTCTGGGGCTGTGGTGGCTGAGGACTCAAGTGTAGCATCTCTTCGTCATCAACAGGTGGCACTGTTGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373953.8
ENST00000479226.1
ENST00000498555.1
CDS TCA 90 bp TGGGCAAGGCTGCTAATCCAGGTGAGCATGTGTGTACCATGGAGATaGCAGCTCCCATGTCTACACCCCAGTTGTGTGCCATCCCATCCT +
Preference number: 5 (lower is better)
Translates to: WARLLIQVSMCVPWR*QLPCLHPSCVPSHP
Trigger: AGGATGGGATGGCACACAACTGGGGTGTAGACATGGGAGCTGTCATCTCCATGGTACACACATGCTCACCTGGATTAGCAGCCTTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484932.5
CDS CCA 90 bp TCTGCTGTTCCTCCAGCTGCACTGCAATGTGCGTTCCGTTGGCTGTaGCCAACAGTGCCACCTGTTGATGACGAAGAGATGCTACACTTG +
Preference number: 5 (lower is better)
Translates to: SAVPPAALQCAFRWL*PTVPPVDDEEMLHL
Trigger: CAAGTGTAGCATCTCTTCGTCATCAACAGGTGGCACTGTTGGCCACAGCCAACGGAACGCACATTGCAGTGCAGCTGGAGGAACAGCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp ACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGATCATCTACGTCAGCCTCCTCACTCAGACATGAAGTaGGCTTCTGGCCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: TEEGLAEENRGDHLRQPPHSDMK*ASGQHQ
Trigger: TTGGTGCTGGCCAGAAGCCAACTTCATGTCTGAGTG...AGGAGGCTGACGTAGATGATCACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp TCAGAGAGACCCACTTGCTCACGGAGGAAGGACTGGCTGAAGAGAACCGTGGTGCAACAGTGCCACCTGTaGATGACGAAGAGATGCTAC +
Preference number: 5 (lower is better)
Translates to: SERPTCSRRKDWLKRTVVQQCHL*MTKRCY
Trigger: GTAGCATCTCTTCGTCATCAACAGGTGGCACTGTTG...CACCACGGTTCTCTTCAGCCAGTCCTTCCTCCGTGAGCAAGTGGGTCTCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CAA 90 bp CAGTTTTCTTGCTGTCTTCTCACCCCAGAGACCTATGTGGCCACCTTCTATGTGGCAATGTGCGTTCCGTaGGCTGTGGCCAACAGTGCC +
Preference number: 5 (lower is better)
Translates to: QFSCCLLTPETYVATFYVAMCVP*AVANSA
Trigger: GGCACTGTTGGCCACAGCCAACGGAACGCACATTGC...CACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
CDS-3UTR CAA 90 bp ACCTGTGGCAAAGGCCTTTCCACAGCTGGGGAAGTCACATCTGTATGGACGGTCCCCCTTTATTCCTTGTaGACTTCTCTGGCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: TCGKGLSTAGEVTSVWTVPLYSL*TSLAVG
Trigger: TCCCACGGCCAGAGAAGTCAACAAGGAATAAAGGGG...GACCGTCCATACAGATGTGACTTCCCCAGCTGTGGAAAGGCCTTTGCCACAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS GCA 90 bp CTCAAAGGAGAGAGCTTCTTTCTGTACCGTCACCTGGTGAATGTATaGGGTGGTCCCATCCTCGAGCTGGATCACCTGCCCTTCAAGAAG +
Preference number: 5 (lower is better)
Translates to: LKGESFFLYRHLVNV*GGPILELDHLPFKK
Trigger: CTTCTTGAAGGGCAGGTGATCCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGTGACGGTACAGAAAGAAGCTCTCTCCTTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS CCA 90 bp AGGAGAGAGCTTCTTTCTGTACCGTCACCTGGTGAATGTATGCGGTaGTCCCATCCTCGAGCTGGATCACCTGCCCTTCAAGAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: RRELLSVPSPGECMR*SHPRAGSPALQEAS
Trigger: AGAAGCTTCTTGAAGGGCAGGTGATCCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGTGACGGTACAGAAAGAAGCTCTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS CCA 90 bp GAGGGACTGAGACCTGAGACTCTGAATGGACAGGGTTGGGGAAGATaGCCAGTGGAACACAGAGAGGACACAGGTGTTGAACCACTGAAT +
Preference number: 5 (lower is better)
Translates to: EGLRPETLNGQGWGR*PVEHREDTGVEPLN
Trigger: ATTCAGTGGTTCAACACCTGTGTCCTCTCTGTGTTCCACTGGCCATCTTCCCCAACCCTGTCCATTCAGAGTCTCAGGTCTCAGTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479226.1
CDS-3UTR CAA 90 bp CCAAGAGCGAGCCTGAGACAGATGCATGGATGCAGGAGGAAAGGGATCTGTCCTGGAAGACCCCTTCTTTaGTGGGGAATCTTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: PRASLRQMHGCRRKGICPGRPLL*WGIFVL
Trigger: CAGGACAAAGATTCCCCACAAAAGAAGGGGTCTTCC...AGGACAGATCCCTTTCCTCCTGCATCCATGCATCTGTCTCAGGCTCGCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS CCA 90 bp CCTAACTGGAAATTGAGGAATTACTCACTGCAAGCAGAGTTGTTCTaGGGATACCCTACCCCCAGACCAGCCTGGAATGGCTGGCACAGA +
Preference number: 5 (lower is better)
Translates to: PNWKLRNYSLQAELF*GYPTPRPAWNGWHR
Trigger: TCTGTGCCAGCCATTCCAGGCTGGTCTGGGGGTAGGGTATCCCCAGAACAACTCTGCTTGCAGTGAGTAATTCCTCAATTTCCAGTTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS-3UTR CAA 90 bp GAGCCTGAGACAGATGCATGGATGCAGGAGGAAAGGGATCTGTCCTCTGAAATGCCCCTTTATTCCTTGTaGACTTCTCTGGCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: EPETDAWMQEERDLSSEMPLYSL*TSLAVG
Trigger: TCCCACGGCCAGAGAAGTCAACAAGGAATAAAGGGG...CATTTCAGAGGACAGATCCCTTTCCTCCTGCATCCATGCATCTGTCTCAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS-3UTR CAA 90 bp AGTTATCCTGAAGGCCAGAAGAGGCTTCAACATTCTGCCTCAGCCAAGAGCGAGCAACAGTGCCACCTGTaGATGACGAAGAGATGCTAC +
Preference number: 5 (lower is better)
Translates to: SYPEGQKRLQHSASAKSEQQCHL*MTKRCY
Trigger: GTAGCATCTCTTCGTCATCAACAGGTGGCACTGTTG...CTCGCTCTTGGCTGAGGCAGAATGTTGAAGCCTCTTCTGGCCTTCAGGATAACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000498555.1
CDS TCA 90 bp AGAGATTTCCTTCTGGGTCACAAATCAGGGTTGCCTGTGGAAGGATaGCTGAGTGGTGATGACGATGGAAGGGCGACTTTTCAGGGAATA +
Preference number: 5 (lower is better)
Translates to: RDFLLGHKSGLPVEG*LSGDDDGRATFQGI
Trigger: TATTCCCTGAAAAGTCGCCCTTCCATCGTCATCACCACTCAGTCATCCTTCCACAGGCAACCCTGATTTGTGACCCAGAAGGAAATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482946.1
CDS CCA 90 bp GGGACCCCAGAGAGGACTGGCAATACCTTTCAGATTGGACCTAACTaGAAATTGAGGAATTACTCACTGCAAGCAGAGTTGTTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GTPERTGNTFQIGPN*KLRNYSLQAELFWG
Trigger: TCCCCAGAACAACTCTGCTTGCAGTGAGTAATTCCTCAATTTCCAGTTAGGTCCAATCTGAAAGGTATTGCCAGTCCTCTCTGGGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS TCA 90 bp ATTTCCTTCTGGGTCACAAATCAGGGTTGCCTGTGGAAGGATGACTaGGTGGTGATGACGATGGAAGGGCGACTTTTCAGGGAATATCTT +
Preference number: 5 (lower is better)
Translates to: ISFWVTNQGCLWKDD*VVMTMEGRLFREYL
Trigger: AAGATATTCCCTGAAAAGTCGCCCTTCCATCGTCATCACCACTCAGTCATCCTTCCACAGGCAACCCTGATTTGTGACCCAGAAGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482946.1
CDS-3UTR CAA 90 bp CTGAAGAGAACCGTGGTGATCATCTACGTCAGCCTCCTTCATTTCCAGATGAAGATAATCCACAGCTGGTaGGCATCAGAGCTGACACAA +
Preference number: 5 (lower is better)
Translates to: LKRTVVIIYVSLLHFQMKIIHSW*ASELTQ
Trigger: TTGTGTCAGCTCTGATGCCAACCAGCTGTGGATTAT...CTTCATCTGGAAATGAAGGAGGCTGACGTAGATGATCACCACGGTTCTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS-3UTR CAA 90 bp CAGATGCCCTTCTCTTCAAGATCCTCATCTAATTCCCCTTTATTCCTTGTTGACCTCTCCTTTGACAGCTaGCTGGACGTAGGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: QMPFSSRSSSNSPLFLVDLSFDS*LDVGCC
Trigger: ACAACAGCCTACGTCCAGCAAGCTGTCAAAGGAGAG...GTCAACAAGGAATAAAGGGGAATTAGATGAGGATCTTGAAGAGAAGGGCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229405.8
CDS TCA 90 bp CAGAGAGGACTGGCAATACCTTTCAGATTGGACCTAACTGGAAATTaGGGAATTACTCACTGCAAGCAGAGTTGTTCTGGGGATACCCTA +
Preference number: 5 (lower is better)
Translates to: QRGLAIPFRLDLTGN*GITHCKQSCSGDTL
Trigger: TAGGGTATCCCCAGAACAACTCTGCTTGCAGTGAGTAATTCCTCAATTTCCAGTTAGGTCCAATCTGAAAGGTATTGCCAGTCCTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS CCA 72 bp GGCGGTGAGGGACTCGCCTCCGCAGGGAGGGCGCCCTaGCGGTCTTCTCAGGTTCTCTCTCATTCCCGCGTC +
Preference number: 6 (lower is better)
Translates to: GGEGLASAGRAP*RSSQVLSHSRV
Trigger: GACGCGGGAATGAGAGAGAACCTGAGAAGACCGCCAGGGCGCCCTCCCTGCGGAGGCGAGTCCCTCACCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491400.5
CDS CAA 90 bp TCGGTCCAGCAGAAGCGTGAGGAGGTGGCGGAGGCCCCGAGGGCTTaGCGTCATCACTTCTGCGGCCTGCGGGCGAGAAGGTGCGCTTCG +
Preference number: 6 (lower is better)
Translates to: SVQQKREEVAEAPRA*RHHFCGLRARRCAS
Trigger: CGAAGCGCACCTTCTCGCCCGCAGGCCGCAGAAGTGATGACGCAAAGCCCTCGGGGCCTCCGCCACCTCCTCACGCTTCTGCTGGACCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000491400.5
CDS GCA 72 bp GTGGCGGAGGCCCCGAGGGCTTTGCGTCATCACTTCTaGGGCCTGCGGGCGAGAAGGTGCGCTTCGGGAGTA +
Preference number: 6 (lower is better)
Translates to: VAEAPRALRHHF*GLRARRCASGV
Trigger: TACTCCCGAAGCGCACCTTCTCGCCCGCAGGCCGCAGAAGTGATGACGCAAAGCCCTCGGGGCCTCCGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000491400.5
CDS CAA 72 bp CAGAAGCGTGAGGAGGTGGCGGAGGCCCCGAGGGCTTaGCGTCATCACTTCTGCGGCCTGCGGGCGAGAAGG +
Preference number: 6 (lower is better)
Translates to: QKREEVAEAPRA*RHHFCGLRARR
Trigger: CCTTCTCGCCCGCAGGCCGCAGAAGTGATGACGCAAAGCCCTCGGGGCCTCCGCCACCTCCTCACGCTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000491400.5
CDS GCA 72 bp CGTGTCACGCTGTGCGTGCTCACCTTGCTGGCATACTaGTCCAGGGCCACCACTGCGTCTGCACTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: RVTLCVLTLLAY*SRATTASALKP
Trigger: GGGCTTCAGTGCAGACGCAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGTGAGCACGCACAGCGTGACACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491400.5
CDS CCA 72 bp GGTCCTCCAAGCCCACCTCTGTCTGTACGGCCAGGATaGTGCTCTCCGATGGCACAGCCACAGGGTGGTGAA +
Preference number: 6 (lower is better)
Translates to: GPPSPPLSVRPG*CSPMAQPQGGE
Trigger: TTCACCACCCTGTGGCTGTGCCATCGGAGAGCACCATCCTGGCCGTACAGACAGAGGTGGGCTTGGAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000460229.1
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS CAA 90 bp GTCTCCAGGGTCACAGCCCCTTGCTGCATGGCCGCAGTGGCCACATaGATGGCCTCCTCTAAGGTCTGCTGTTCCTCCAGCTGCACTGCA +
Preference number: 6 (lower is better)
Translates to: VSRVTAPCCMAAVAT*MASSKVCCSSSCTA
Trigger: TGCAGTGCAGCTGGAGGAACAGCAGACCTTAGAGGAGGCCATCAATGTGGCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCTGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS TCA 72 bp ATCTGTCCATTCCAAGGATTCGGTCCAGCAGAAGCGTaGGGAGGTGGCGGAGGCCCCGAGGGCTTTGCGTCA +
Preference number: 6 (lower is better)
Translates to: ICPFQGFGPAEA*GGGGGPEGFAS
Trigger: TGACGCAAAGCCCTCGGGGCCTCCGCCACCTCCTCACGCTTCTGCTGGACCGAATCCTTGGAATGGACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000491400.5
CDS GCA 72 bp CCTCCAAGCCCACCTCTGTCTGTACGGCCAGGATGGTaGTCTCCGATGGCACAGCCACAGGGTGGTGAATGT +
Preference number: 6 (lower is better)
Translates to: PPSPPLSVRPGW*SPMAQPQGGEC
Trigger: ACATTCACCACCCTGTGGCTGTGCCATCGGAGAGCACCATCCTGGCCGTACAGACAGAGGTGGGCTTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000460229.1
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS GCA 72 bp CTTGCTGGCATACTGCTCCAGGGCCACCACTGCGTCTaGACTGAAGCCCTCATCATCCTCTGCTGCCAGGTC +
Preference number: 6 (lower is better)
Translates to: LAGILLQGHHCV*TEALIILCCQV
Trigger: GACCTGGCAGCAGAGGATGATGAGGGCTTCAGTGCAGACGCAGTGGTGGCCCTGGAGCAGTATGCCAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS CCA 72 bp CCGATGGCACAGCCACAGGGTGGTGAATGTAGGCAGTaGAGCCATCTTCCAGTTGGACGGCTTCCAGGGTGC +
Preference number: 6 (lower is better)
Translates to: PMAQPQGGECRQ*SHLPVGRLPGC
Trigger: GCACCCTGGAAGCCGTCCAACTGGAAGATGGCTCCACTGCCTACATTCACCACCCTGTGGCTGTGCCATCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000460229.1
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS CCA 72 bp GGGCTGTCAGGCTTCCCTCGACAAGGCATGGTGTGTTaGGGTGCCCTCACCTTTCTGTACCGTCACCTGGTG +
Preference number: 6 (lower is better)
Translates to: GLSGFPRQGMVC*GALTFLYRHLV
Trigger: CACCAGGTGACGGTACAGAAAGGTGAGGGCACCCCAACACACCATGCCTTGTCGAGGGAAGCCTGACAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS CCA 72 bp CTTGGTGGGGGCTGTCAGGCTTCCCTCGACAAGGCATaGTGTGTTGGGGTGCCCTCACCTTTCTGTACCGTC +
Preference number: 6 (lower is better)
Translates to: LGGGCQASLDKA*CVGVPSPFCTV
Trigger: GACGGTACAGAAAGGTGAGGGCACCCCAACACACCATGCCTTGTCGAGGGAAGCCTGACAGCCCCCACCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS CAA 72 bp GGGGCTGTCAGGCTTCCCTCGACAAGGCATGGTGTGTaGGGGTGCCCTCACCTTTCTGTACCGTCACCTGGT +
Preference number: 6 (lower is better)
Translates to: GAVRLPSTRHGV*GCPHLSVPSPG
Trigger: ACCAGGTGACGGTACAGAAAGGTGAGGGCACCCCAACACACCATGCCTTGTCGAGGGAAGCCTGACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS CAA 90 bp CGGTTGTCTAGAGTGACAGACCGTGTCACGCTGTGCGTGCTCACCTaGCTGGCATACTGCTCCAGGGCCACCACTGCGTCTGCACTGAAG +
Preference number: 6 (lower is better)
Translates to: RLSRVTDRVTLCVLT*LAYCSRATTASALK
Trigger: CTTCAGTGCAGACGCAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGGTGAGCACGCACAGCGTGACACGGTCTGTCACTCTAGACAACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491400.5
CDS TCA 72 bp ACATGGTGCCCAAGCACAGGGCTGCCCTTGTCCTCTTaGGAGGTGAAGTTCTGGCAGGGCCAAGAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: TWCPSTGLPLSS*EVKFWQGQEAV
Trigger: CACTGCCTCTTGGCCCTGCCAGAACTTCACCTCTCAAGAGGACAAGGGCAGCCCTGTGCTTGGGCACCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491400.5
CDS GCA 72 bp TCCCGAAGCGCTTTAAGGTGCGCAGTCCGCAGGCCTTaGCTACTGATCTTCCAGCCACCCCTTGAAGGAAGC +
Preference number: 6 (lower is better)
Translates to: SRSALRCAVRRP*LLIFQPPLEGS
Trigger: GCTTCCTTCAAGGGGTGGCTGGAAGATCAGTAGGCAAGGCCTGCGGACTGCGCACCTTAAAGCGCTTCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000491400.5
CDS GCA 72 bp CAGTGGAGCCATCTTCCAGTTGGACGGCTTCCAGGGTaGTGGGGTCATAGCCTTCTCTGGGTGTGCGGTGTA +
Preference number: 6 (lower is better)
Translates to: QWSHLPVGRLPG*WGHSLLWVCGV
Trigger: TACACCGCACACCCAGAGAAGGCTATGACCCCAGCACCCTGGAAGCCGTCCAACTGGAAGATGGCTCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000460229.1
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS GCA 72 bp GCCCTCACCTTTCTGTACCGTCACCTGGTGAATGTATaGGGTGGTCCCATCCTCGAGCTGGATCACCTGCCC +
Preference number: 6 (lower is better)
Translates to: ALTFLYRHLVNV*GGPILELDHLP
Trigger: GGGCAGGTGATCCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGTGACGGTACAGAAAGGTGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS GCA 72 bp GGAGATGACAGCTCCCATGTCTACACCCCAGTTGTGTaGCATCCCATCCTCCAGTCCTGCCACCCCATCCTC +
Preference number: 6 (lower is better)
Translates to: GDDSSHVYTPVV*HPILQSCHPIL
Trigger: GAGGATGGGGTGGCAGGACTGGAGGATGGGATGGCACACAACTGGGGTGTAGACATGGGAGCTGTCATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484932.5
CDS CCA 72 bp ATTCCAAGGATTCGGTCCAGCAGAAGCGTGAGGAGGTaGCGGAGGCCCCGAGGGCTTTGCGTCATCACTTCT +
Preference number: 6 (lower is better)
Translates to: IPRIRSSRSVRR*RRPRGLCVITS
Trigger: AGAAGTGATGACGCAAAGCCCTCGGGGCCTCCGCCACCTCCTCACGCTTCTGCTGGACCGAATCCTTGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000491400.5
CDS CCA 72 bp CACCTCTGTCTGTACGGCCAGGATGGTGCTCTCCGATaGCACAGCCACAGGGTGGTGAATGTAGGCAGTGGA +
Preference number: 6 (lower is better)
Translates to: HLCLYGQDGALR*HSHRVVNVGSG
Trigger: TCCACTGCCTACATTCACCACCCTGTGGCTGTGCCATCGGAGAGCACCATCCTGGCCGTACAGACAGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000460229.1
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS CAA 90 bp CCCTTGGTGGGGGCTGTCAGGCTTCCCTCGACAAGGCATGGTGTGTaGGGGTGCCCTCACCTTTCTGTACCGTCACCTGGTGAATGTATG +
Preference number: 6 (lower is better)
Translates to: PLVGAVRLPSTRHGV*GCPHLSVPSPGECM
Trigger: CATACATTCACCAGGTGACGGTACAGAAAGGTGAGGGCACCCCAACACACCATGCCTTGTCGAGGGAAGCCTGACAGCCCCCACCAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS TCA 72 bp GTTGGGGTGCCCTCACCTTTCTGTACCGTCACCTGGTaGATGTATGCGGTGGTCCCATCCTCGAGCTGGATC +
Preference number: 6 (lower is better)
Translates to: VGVPSPFCTVTW*MYAVVPSSSWI
Trigger: GATCCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGTGACGGTACAGAAAGGTGAGGGCACCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS GCA 72 bp GCACTCACTGTCTTACGGTCCCGAAGCGCTTTAAGGTaGGCAGTCCGCAGGCCTTGCCTACTGATCTTCCAG +
Preference number: 6 (lower is better)
Translates to: ALTVLRSRSALR*AVRRPCLLIFQ
Trigger: CTGGAAGATCAGTAGGCAAGGCCTGCGGACTGCGCACCTTAAAGCGCTTCGGGACCGTAAGACAGTGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229405.8
ENST00000491400.5
CDS CCA 72 bp TGGAGCCATCTTCCAGTTGGACGGCTTCCAGGGTGCTaGGGTCATAGCCTTCTCTGGGTGTGCGGTGTATGT +
Preference number: 6 (lower is better)
Translates to: WSHLPVGRLPGC*GHSLLWVCGVC
Trigger: ACATACACCGCACACCCAGAGAAGGCTATGACCCCAGCACCCTGGAAGCCGTCCAACTGGAAGATGGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000460229.1
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS CAA 72 bp AGGGTGGTGAATGTAGGCAGTGGAGCCATCTTCCAGTaGGACGGCTTCCAGGGTGCTGGGGTCATAGCCTTC +
Preference number: 6 (lower is better)
Translates to: RVVNVGSGAIFQ*DGFQGAGVIAF
Trigger: GAAGGCTATGACCCCAGCACCCTGGAAGCCGTCCAACTGGAAGATGGCTCCACTGCCTACATTCACCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000460229.1
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS CAA 72 bp ACCATGGAGATGACAGCTCCCATGTCTACACCCCAGTaGTGTGCCATCCCATCCTCCAGTCCTGCCACCCCA +
Preference number: 6 (lower is better)
Translates to: TMEMTAPMSTPQ*CAIPSSSPATP
Trigger: TGGGGTGGCAGGACTGGAGGATGGGATGGCACACAACTGGGGTGTAGACATGGGAGCTGTCATCTCCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484932.5
CDS CAA 90 bp AGACCAGCCTGGAATGGCTGGCACAGAAGGGTTCTGGGCTGGGAGTaGGGAATGTGTCTTAGATGGGAAGCCTACAGTAGAGGGGTTGGG +
Preference number: 6 (lower is better)
Translates to: RPAWNGWHRRVLGWE*GMCLRWEAYSRGVG
Trigger: CCCAACCCCTCTACTGTAGGCTTCCCATCTAAGACACATTCCCAACTCCCAGCCCAGAACCCTTCTGTGCCAGCCATTCCAGGCTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS GCA 72 bp GAGAGCTTCTTTCTGTACCGTCACCTGGTGAATGTATaGGGTGGTCCCATCCTCGAGCTGGATCACCTGCCC +
Preference number: 6 (lower is better)
Translates to: ESFFLYRHLVNV*GGPILELDHLP
Trigger: GGGCAGGTGATCCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGTGACGGTACAGAAAGAAGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS GCA 72 bp GTCAGGCTTCCCTCGACAAGGCATGGTGTGTTGGGGTaGCCTCACCTTTCTGTACCGTCACCTGGTGAATGT +
Preference number: 6 (lower is better)
Translates to: VRLPSTRHGVLG*PHLSVPSPGEC
Trigger: ACATTCACCAGGTGACGGTACAGAAAGGTGAGGGCACCCCAACACACCATGCCTTGTCGAGGGAAGCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS GCA 72 bp CTCAAAGGAGAGAGCTTCTGTAACGAGAGCAATGCCTaGCTTTCCCTGGAGCTCAGTGCCATGGAGGGGTCC +
Preference number: 6 (lower is better)
Translates to: LKGESFCNESNA*LSLELSAMEGS
Trigger: GGACCCCTCCATGGCACTGAGCTCCAGGGAAAGGCAGGCATTGCTCTCGTTACAGAAGCTCTCTCCTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS CCA 72 bp CCTCCAGCTGCACTGCAATGTGCGTTCCGTTGGCTGTaGCCAACAGTGCCACCTGTTGATGACGAAGAGATG +
Preference number: 6 (lower is better)
Translates to: PPAALQCAFRWL*PTVPPVDDEEM
Trigger: CATCTCTTCGTCATCAACAGGTGGCACTGTTGGCCACAGCCAACGGAACGCACATTGCAGTGCAGCTGGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339411.5
ENST00000373953.8
CDS CCA 72 bp CACCTTTCTGTACCGTCACCTGGTGAATGTATGCGGTaGTCCCATCCTCGAGCTGGATCACCTGCCCTTCAA +
Preference number: 6 (lower is better)
Translates to: HLSVPSPGECMR*SHPRAGSPALQ
Trigger: TTGAAGGGCAGGTGATCCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGTGACGGTACAGAAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460229.1
ENST00000484932.5
CDS CCA 72 bp CTGACCCTGGCCTCTTTTCAAGAGTTCAGTCAGAGTTaGAGAACTCAGGGTGGGTGTAGAGGGGTGGTAGGG +
Preference number: 6 (lower is better)
Translates to: LTLASFQEFSQS*RTQGGCRGVVG
Trigger: CCCTACCACCCCTCTACACCCACCCTGAGTTCTCCAACTCTGACTGAACTCTTGAAAAGAGGCCAGGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS CAA 72 bp GCCCTTGTAGCCACAGCGGAATGCTCTGTCTCCAACTaGCTGCCCTTTTCCATTACGGGGAATCTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: ALVATAECSVSN*LPFSITGNLAV
Trigger: GACAGCCAGATTCCCCGTAATGGAAAAGGGCAGCAAGTTGGAGACAGAGCATTCCGCTGTGGCTACAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000469195.5
ENST00000486891.5
CDS CAA 90 bp ACGCCCACAGCCCTTGTAGCCACAGCGGAATGCTCTGTCTCCAACTaGCTGCCCTTTTCCATTACGGGGAATCTGGCTGTCATGAAGAAC +
Preference number: 6 (lower is better)
Translates to: TPTALVATAECSVSN*LPFSITGNLAVMKN
Trigger: GTTCTTCATGACAGCCAGATTCCCCGTAATGGAAAAGGGCAGCAAGTTGGAGACAGAGCATTCCGCTGTGGCTACAAGGGCTGTGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000469195.5
ENST00000486891.5
CDS CCA 72 bp CTTCTTTCTGTACCGTCACCTGGTGAATGTATGCGGTaGTCCCATCCTCGAGCTGGATCACCTGCCCTTCAA +
Preference number: 6 (lower is better)
Translates to: LLSVPSPGECMR*SHPRAGSPALQ
Trigger: TTGAAGGGCAGGTGATCCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGTGACGGTACAGAAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS CCA 72 bp CACCAAGAGCCACAGCTGAGGTCAGAGATTTCCTTCTaGGTCACAAATCTCGCGCGATATCCAGGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: HQEPQLRSEISF*VTNLARYPGSR
Trigger: CCTGGAACCTGGATATCGCGCGAGATTTGTGACCCAGAAGGAAATCTCTGACCTCAGCTGTGGCTCTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460229.1
ENST00000469195.5
ENST00000484932.5
ENST00000486891.5
CDS TCA 72 bp TCAAAGGAGAGAGCTTCTTTCTGTACCGTCACCTGGTaGATGTATGCGGTGGTCCCATCCTCGAGCTGGATC +
Preference number: 6 (lower is better)
Translates to: SKERASFCTVTW*MYAVVPSSSWI
Trigger: GATCCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGTGACGGTACAGAAAGAAGCTCTCTCCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229405.8
ENST00000339411.5
ENST00000373953.8
ENST00000469195.5
ENST00000486891.5
ENST00000491400.5
CDS TCA 72 bp CTGCTAATCCAGGTGAGCATGTGTGTACCATGGAGATaGCAGCTCCCATGTCTACACCCCAGTTGTGTGCCA +
Preference number: 6 (lower is better)
Translates to: LLIQVSMCVPWR*QLPCLHPSCVP
Trigger: TGGCACACAACTGGGGTGTAGACATGGGAGCTGTCATCTCCATGGTACACACATGCTCACCTGGATTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484932.5
CDS CCA 72 bp TCAGTCCATAGCCTGTGGCAAAGGCCTTTCCACAGCTaGGGAAGTCACATCTGTATGGACGGTCACCTGTAT +
Preference number: 6 (lower is better)
Translates to: SVHSLWQRPFHS*GSHICMDGHLY
Trigger: ATACAGGTGACCGTCCATACAGATGTGACTTCCCCAGCTGTGGAAAGGCCTTTGCCACAGGCTATGGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339411.5
ENST00000373953.8
ENST00000469195.5
ENST00000486891.5
CDS CAA 90 bp ATTGGACCTAACTGGAAATTGAGGAATTACTCACTGCAAGCAGAGTaGTTCTGGGGATACCCTACCCCCAGACCAGCCTGGAATGGCTGG +
Preference number: 6 (lower is better)
Translates to: IGPNWKLRNYSLQAE*FWGYPTPRPAWNGW
Trigger: CCAGCCATTCCAGGCTGGTCTGGGGGTAGGGTATCCCCAGAACAACTCTGCTTGCAGTGAGTAATTCCTCAATTTCCAGTTAGGTCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS TCA 72 bp GTGAGGATACACAGGAGTCATGGACGGCGGATAAGGTaGGGAGTTGAAGGTGACAGTTCACTCTGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: VRIHRSHGRRIR*GVEGDSSLCFF
Trigger: GAAGAAGCAGAGTGAACTGTCACCTTCAACTCCTCACCTTATCCGCCGTCCATGACTCCTGTGTATCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS CAA 72 bp AACTGGAAATTGAGGAATTACTCACTGCAAGCAGAGTaGTTCTGGGGATACCCTACCCCCAGACCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: NWKLRNYSLQAE*FWGYPTPRPAW
Trigger: CCAGGCTGGTCTGGGGGTAGGGTATCCCCAGAACAACTCTGCTTGCAGTGAGTAATTCCTCAATTTCCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS CAA 90 bp CCAGAGAGGACTGGCAATACCTTTCAGATTGGACCTAACTGGAAATaGAGGAATTACTCACTGCAAGCAGAGTTGTTCTGGGGATACCCT +
Preference number: 6 (lower is better)
Translates to: PERTGNTFQIGPNWK*RNYSLQAELFWGYP
Trigger: AGGGTATCCCCAGAACAACTCTGCTTGCAGTGAGTAATTCCTCAATTTCCAGTTAGGTCCAATCTGAAAGGTATTGCCAGTCCTCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486891.5
CDS CCA 72 bp GAGAGGACTGGCAATACCTTTCAGATTGGACCTAACTaGAAATTGAGGAATTACTCACTGCAAGCAGAGTTG +
Preference number: 6 (lower is better)
Translates to: ERTGNTFQIGPN*KLRNYSLQAEL
Trigger: CAACTCTGCTTGCAGTGAGTAATTCCTCAATTTCCAGTTAGGTCCAATCTGAAAGGTATTGCCAGTCCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486891.5