RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF75A (Homo sapiens)

Ensembl gene IDs: ENSG00000162086

Ensembl transcript IDs: ENST00000498240.6, ENST00000571101.5, ENST00000572999.5, ENST00000573828.1, ENST00000574298.6, ENST00000575234.1, ENST00000575253.1, ENST00000575812.1, ENST00000612186.1, ENST00000617839.1, ENST00000669516.2

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTACATGTCCAGGTCTCCATGCCAAATGAGCCACAGGATCCTGCCTaGAGCACACACACTCCAACTCCCATGGAAATTAAGTCTCTCATT +
Preference number: 1 (lower is better)
Translates to: LHVQVSMPNEPQDPA*STHTPTPMEIKSLI
Trigger: AATGAGAGACTTAATTTCCATGGGAGTTGGAGTGTGTGTGCTGCAGGCAGGATCCTGTGGCTCATTTGGCATGGAGACCTGGACATGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
3UTR TCA 90 bp CATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTaGAGAGAATGGTATGCAATTAAACATGCATGTTACTGCTTTTTG +
Preference number: 1 (lower is better)
Translates to: HFGLMRLWKLVSLLL*REWYAIKHACYCFL
Trigger: CAAAAAGCAGTAACATGCATGTTTAATTGCATACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR TCA 90 bp CAGGATCCAAGAGAAGTTGCCGAAAAGTTTAAGAAGGAACTCAAGTaGTGTCCAACTTTGCAAACCGTGTCCAATGACAAAAGAAAGAAA +
Preference number: 1 (lower is better)
Translates to: QDPREVAEKFKKELK*CPTLQTVSNDKRKK
Trigger: TTTCTTTCTTTTGTCATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTTCGGCAACTTCTCTTGGATCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR GCA 90 bp ATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGTaGATTAATAGTTCATCTGGAGATTCCCTAGTGGTGGTTAACAAG +
Preference number: 1 (lower is better)
Translates to: MSSIFQTSPMRGIRQ*INSSSGDSLVVVNK
Trigger: CTTGTTAACCACCACTAGGGAATCTCCAGATGAACTATTAATGCACTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR CCA 90 bp AAGACCATGCTGCCAATGTTTCTATTGGATGTGTTCAAAAATGACTaGAGAGATCAATACAAAGCCAACAATGTTTACTTCTGTGACCAC +
Preference number: 1 (lower is better)
Translates to: KTMLPMFLLDVFKND*RDQYKANNVYFCDH
Trigger: GTGGTCACAGAAGTAAACATTGTTGGCTTTGTATTGATCTCTCCAGTCATTTTTGAACACATCCAATAGAAACATTGGCAGCATGGTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR-3UTR TCA 90 bp AAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGAACTCCGGGGATACTTaGACCCATGGCTCTTCCCCT +
Preference number: 2 (lower is better)
Translates to: KSLRRNSSDVQLCKPCPMNSGDT*THGSSP
Trigger: AGGGGAAGAGCCATGGGTTCAAGTATCCCCGGAGTT...CATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498240.6
3UTR-3UTR TCA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTAGCACAATCTTTCTTGTaGCGATCCATAAGTTTGAGC +
Preference number: 2 (lower is better)
Translates to: RPHETMEIGKPATVKRMVAQSFL*RSISLS
Trigger: GCTCAAACTTATGGATCGTCACAAGAAAGATTGTGC...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498240.6
3UTR-3UTR TCA 90 bp TACAGGCACCGGTCATCATGCCCAGCTAATTTGTTTATTTTTGTAGAGAGAGGGTGCATCCAGCCTCCCTaGCTCTTTATTACCTTTTAT +
Preference number: 2 (lower is better)
Translates to: YRHRSSCPANLFIFVERGCIQPP*LFITFY
Trigger: ATAAAAGGTAATAAAGAGTCAGGGAGGCTGGATGCA...CCCTCTCTCTACAAAAATAAACAAATTAGCTGGGCATGATGACCGGTGCCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612186.1
3UTR-3UTR CCA 90 bp CCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGTTGCCTGCTGTTTTCTaGGGAACTTTTACTTTGGCC +
Preference number: 2 (lower is better)
Translates to: PLEMSSIFQTSPMRGIRQLPAVF*GTFTLA
Trigger: GGCCAAAGTAAAAGTTCCCCAGAAAACAGCAGGCAA...CTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498240.6
3UTR-3UTR CCA 90 bp AGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGACAAAAGAAAGATTCACTGGAAAATCTTaGTGCCATTTTCCCACTCTG +
Preference number: 2 (lower is better)
Translates to: RNSSDVQLCKPCPMTKERFTGKS*CHFPTL
Trigger: CAGAGTGGGAAAATGGCACCAAGATTTTCCAGTGAA...TCTTTCTTTTGTCATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498240.6
3UTR-3UTR TCA 90 bp AGACAGTGCATTAATAGTTCATCTGGAGATTCCCTAGTGGTGGTTAACAAGATTAAGAAGGAACTCAAGTaGTGTCCAACTTTGCAAACC +
Preference number: 2 (lower is better)
Translates to: RQCINSSSGDSLVVVNKIKKELK*CPTLQT
Trigger: GGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTT...AATCTTGTTAACCACCACTAGGGAATCTCCAGATGAACTATTAATGCACTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR-3UTR GCA 90 bp GATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACTGGAAAATCTTGGTaGCATTTTCCCACTCTGTGC +
Preference number: 2 (lower is better)
Translates to: DSIRDVFYFPNITNERHKTGKSW*HFPTLC
Trigger: GCACAGAGTGGGAAAATGGCACCAAGATTTTCCAGT...CTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498240.6
3UTR-3UTR GCA 90 bp TTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTAGACTACTGAGTGGCTaGAGAGCAAGTCTTGATTAT +
Preference number: 2 (lower is better)
Translates to: LHCNSFRPHETMEIGKPARLLSG*RASLDY
Trigger: ATAATCAAGACTTGCTCTGCAGCCACTCAGTAGTCT...AGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR-3UTR GCA 90 bp TTGCCGAAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTTTTGGAAGACCATGCTaGCAATGTTTCTATTGGATG +
Preference number: 2 (lower is better)
Translates to: LPKSLRRNSSDVQLCKPCFGRPC*QCFYWM
Trigger: CATCCAATAGAAACATTGGCAGCATGGTCTTCCAAA...ACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTTCGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR-3UTR TCA 90 bp TTGCCGAAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTGGATGTGTTCAAAAATaGCTGGAGAGATCAATACAA +
Preference number: 2 (lower is better)
Translates to: LPKSLRRNSSDVQLCKPCGCVQK*LERSIQ
Trigger: TTGTATTGATCTCTCCAGTCATTTTTGAACACATCC...ACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTTCGGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR-3UTR GCA 90 bp AAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGAAAAGGCTTCTCTCTTaGACAATCTTTCTTGTGACG +
Preference number: 2 (lower is better)
Translates to: KSLRRNSSDVQLCKPCPMKRLLS*TIFLVT
Trigger: CGTCACAAGAAAGATTGTGCAAGAGAGAAGCCTTTT...CATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498240.6
3UTR CAA 90 bp CAACTTTGCAAACCGTGTCCAATGACAAAAGAAAGAAAATCCAATTaGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATG +
Preference number: 2 (lower is better)
Translates to: QLCKPCPMTKERKSN*VPGTLYIVIHFGLM
Trigger: CATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAATTGGATTTTCTTTCTTTTGTCATTGGACACGGTTTGCAAAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR-3UTR GCA 90 bp CCCATGATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCAAACATGCATGTTACTaGTTTTTGTTTTGGAAGACC +
Preference number: 2 (lower is better)
Translates to: PMIPLEMSSIFQTSPMRGKHACY*FLFWKT
Trigger: GGTCTTCCAAAACAAAAAGCAGTAACATGCATGTTT...GCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATCATGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR-3UTR CCA 90 bp CCCATGATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCTTCTCTTTCAGGCCTTaGGCAAGTACTAATTTTTAT +
Preference number: 2 (lower is better)
Translates to: PMIPLEMSSIFQTSPMRGFSFRP*ASTNFY
Trigger: ATAAAAATTAGTACTTGCCCAAGGCCTGAAAGAGAA...GCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATCATGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
3UTR-3UTR CCA 90 bp AGAGAATGGTATGCAATTAAACATGCATGTTACTGCTTTTTGTTTTGGAAGACCGTGTTCAAAAATGACTaGAGAGATCAATACAAAGCC +
Preference number: 2 (lower is better)
Translates to: REWYAIKHACYCFLFWKTVFKND*RDQYKA
Trigger: GGCTTTGTATTGATCTCTCCAGTCATTTTTGAACAC...GGTCTTCCAAAACAAAAAGCAGTAACATGCATGTTTAATTGCATACCATTCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR GCA 72 bp GAACCGTCTCCTGCTGACTACATGTCCAGGTCTCCATaGCAAATGAGCCACAGGATCCTGCCTGCAGCACAC +
Preference number: 3 (lower is better)
Translates to: EPSPADYMSRSP*QMSHRILPAAH
Trigger: GTGTGCTGCAGGCAGGATCCTGTGGCTCATTTGGCATGGAGACCTGGACATGTAGTCAGCAGGAGACGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
3UTR GCA 72 bp CTCGAGGATAGCCGGGATTACAGGCACCGGTCATCATaGCCAGCTAATTTGTTTATTTTTGTAGAGAGAGGG +
Preference number: 3 (lower is better)
Translates to: LEDSRDYRHRSS*PANLFIFVERG
Trigger: CCCTCTCTCTACAAAAATAAACAAATTAGCTGGGCATGATGACCGGTGCCTGTAATCCCGGCTATCCTCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612186.1
3UTR-3UTR CAA 90 bp ATCCAATTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGAAACTCCGGGGATACTaGAACCCATGGCTCTTCCCC +
Preference number: 3 (lower is better)
Translates to: IQFGSWNTLHCNSFRPHEKLRGY*NPWLFP
Trigger: GGGGAAGAGCCATGGGTTCAAGTATCCCCGGAGTTT...CTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAATTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498240.6
3UTR-3UTR CAA 90 bp ATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCATTAGAGATGTCAGGATCCAAGAGAAGTaGCCGAAAAGTTTAAGAAGG +
Preference number: 3 (lower is better)
Translates to: IPWLQIPTRFPHDSIRDVRIQEK*PKSLRR
Trigger: CCTTCTTAAACTTTTCGGCAACTTCTCTTGGATCCT...GACATCTCTAATGGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR TCA 72 bp CCAACAATGTTTACTTCTGTGACCACAGAAGACTACTaGGTGGCTGCAGAGCAAGTCTTGATTATTTTCTGT +
Preference number: 3 (lower is better)
Translates to: PTMFTSVTTEDY*VAAEQVLIIFC
Trigger: ACAGAAAATAATCAAGACTTGCTCTGCAGCCACTCAGTAGTCTTCTGTGGTCACAGAAGTAAACATTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR-3UTR CAA 90 bp TTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTAGTGCCAAGCTCCATTaGGTGAATGTCTTCAGAATG +
Preference number: 3 (lower is better)
Translates to: LHCNSFRPHETMEIGKPASAKLH*VNVFRM
Trigger: CATTCTGAAGACATTCACCAAATGGAGCTTGGCACT...AGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR-3UTR CAA 90 bp TGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGTTACTGCTTTTTGTTTaGGAAGACCATGCTGCCAAT +
Preference number: 3 (lower is better)
Translates to: CNSFRPHETMEIGKPATVLLLFV*EDHAAN
Trigger: ATTGGCAGCATGGTCTTCCAAAACAAAAAGCAGTAA...CACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR GCA 72 bp ATTTTCCAAACATCACCAATGAGAGGCATAAGACAGTaGATTAATAGTTCATCTGGAGATTCCCTAGTGGTG +
Preference number: 3 (lower is better)
Translates to: IFQTSPMRGIRQ*INSSSGDSLVV
Trigger: CACCACTAGGGAATCTCCAGATGAACTATTAATGCACTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR-3UTR CAA 90 bp TTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTGCTGCAGAGCAAGTCTaGATTATTTTCTGTGAAATG +
Preference number: 3 (lower is better)
Translates to: LHCNSFRPHETMEIGKPAAAEQV*IIFCEM
Trigger: CATTTCACAGAAAATAATCAAGACTTGCTCTGCAGC...AGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR-3UTR CAA 90 bp TTGCCGAAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTGAAAGAAAATCCAATTaGGTTCCTGGAACACTTTAC +
Preference number: 3 (lower is better)
Translates to: LPKSLRRNSSDVQLCKPCERKSN*VPGTLY
Trigger: GTAAAGTGTTCCAGGAACCAAATTGGATTTTCTTTC...ACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTTCGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR TCA 72 bp CTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTaGAGAGAATGGTATGCAATTAAACATGCATGTTAC +
Preference number: 3 (lower is better)
Translates to: LMRLWKLVSLLL*REWYAIKHACY
Trigger: GTAACATGCATGTTTAATTGCATACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTACCGCCAGCCCACCGCTaGCCTACCGCAGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RPHETMEIGKPATVKRMVPPAHR*PTAALS
Trigger: GGACAGGGCTGCGGTAGGCCAGCGGTGGGCTGGCGG...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTGAAAGGCCGCCGATCTaGGGAGCGCAACCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CQAPFGECLQNEDTGQASERPPI*GAQPPA
Trigger: GGCTGGCGGTTGCGCTCCTCAGATCGGCGGCCTTTC...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCAGCACTCGGCCAGCTTaGCTTCCGTGGAGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLSTRPA*LPWRPL
Trigger: GAGCGGCCTCCACGGAAGCCAAGCTGGCCGAGTGCT...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR TCA 90 bp GGTTCAAATGATTCTCCCTCCTCAGCCTCGAGGATAGCCGGGATTACAGGCACCATTCTTGAAGTTTGCTaGCAGCCTCACGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GSNDSPSSASRIAGITGTILEVC*QPHGVH
Trigger: GTGGACCCCGTGAGGCTGTCAGCAAACTTCAAGAAT...GGTGCCTGTAATCCCGGCTATCCTCGAGGCTGAGGAGGGAGAATCATTTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR GCA 90 bp GGTTCAAATGATTCTCCCTCCTCAGCCTCGAGGATAGCCGGGATTACAGGCACCTGTGGATGGTGCTTCTaGATCTGGGTCTGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GSNDSPSSASRIAGITGTCGWCF*IWVCVS
Trigger: GGAGACACAGACCCAGATGCAGAAGCACCATCCACA...GGTGCCTGTAATCCCGGCTATCCTCGAGGCTGAGGAGGGAGAATCATTTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR GCA 90 bp GGTTCAAATGATTCTCCCTCCTCAGCCTCGAGGATAGCCGGGATTACAGGCACCCCACAGCCTCCTCAATaGTCTGTGGATGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSNDSPSSASRIAGITGTPQPPQ*SVDGAS
Trigger: AGAAGCACCATCCACAGAGCATTGAGGAGGCTGTGG...GGTGCCTGTAATCCCGGCTATCCTCGAGGCTGAGGAGGGAGAATCATTTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR CCA 90 bp CATCTAATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCCGCAGGCCCGCCCTCTaGCTAAGGCGCCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: HLIYIPWLQIPTRFPHDSRRPAL*LRRLSP
Trigger: CGGGCTCAGGCGCCTTAGCCAGAGGGCGGGCCTGCG...GGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATATTAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498240.6
CDS-3UTR CCA 90 bp AAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGCCGCCAGCCCACCGCTaGCCTACCGCAGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KSLRRNSSDVQLCKPCPMPPAHR*PTAALS
Trigger: GGACAGGGCTGCGGTAGGCCAGCGGTGGGCTGGCGG...CATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp CTGCTTTATCCTACTGACATTGCAAGGCAGGGATTAACAAGTCTAGTTTCTTTTCCGCCAGCCCACCGCTaGCCTACCGCAGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLYPTDIARQGLTSLVSFPPAHR*PTAALS
Trigger: GGACAGGGCTGCGGTAGGCCAGCGGTGGGCTGGCGG...AAAAGAAACTAGACTTGTTAATCCCTGCCTTGCAATGTCAGTAGGATAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTACCAGCTTGGCTTCCGTaGAGGCCGCTCCTCGCTTTC +
Preference number: 4 (lower is better)
Translates to: RPHETMEIGKPATVKRMVPAWLP*RPLLAF
Trigger: GAAAGCGAGGAGCGGCCTCCACGGAAGCCAAGCTGG...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp GGTTCAAATGATTCTCCCTCCTCAGCCTCGAGGATAGCCGGGATTACAGGCACCCTCCTCAATGCTCTGTaGATGGTGCTTCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: GSNDSPSSASRIAGITGTLLNAL*MVLLHL
Trigger: CAGATGCAGAAGCACCATCCACAGAGCATTGAGGAG...GGTGCCTGTAATCCCGGCTATCCTCGAGGCTGAGGAGGGAGAATCATTTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR CCA 90 bp GGTTCAAATGATTCTCCCTCCTCAGCCTCGAGGATAGCCGGGATTACAGGCACCACCCTCAATTCACCCTaGCTCCAAAGAGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: GSNDSPSSASRIAGITGTTLNSP*LQRGQK
Trigger: CTTTTGCCCTCTTTGGAGCCAGGGTGAATTGAGGGT...GGTGCCTGTAATCCCGGCTATCCTCGAGGCTGAGGAGGGAGAATCATTTGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR GCA 90 bp GGTTCAAATGATTCTCCCTCCTCAGCCTCGAGGATAGCCGGGATTACAGGCACCTGCTCTAGGAAGTTCTaGTCCTGTGTTAAGACACCC +
Preference number: 4 (lower is better)
Translates to: GSNDSPSSASRIAGITGTCSRKF*SCVKTP
Trigger: GGGTGTCTTAACACAGGAGCAGAACTTCCTAGAGCA...GGTGCCTGTAATCCCGGCTATCCTCGAGGCTGAGGAGGGAGAATCATTTGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR CCA 90 bp ATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCATTAGAGACGCTTTCCGAGGGTaGCGCAGGCCCGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: IYIPWLQIPTRFPHDSIRDAFRG*RRPALW
Trigger: CCAGAGGGCGGGCCTGCGCCACCCTCGGAAAGCGTC...TCTAATGGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498240.6
CDS-3UTR CCA 90 bp TGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAGCACTCGGCCAGCTTaGCTTCCGTGGAGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: CNSFRPHETMEIGKPATVSTRPA*LPWRPL
Trigger: GAGCGGCCTCCACGGAAGCCAAGCTGGCCGAGTGCT...CACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR TCA 90 bp TTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAAGGCCGCCGATCTaGGGAGCGCAACCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: FGSWNTLHCNSFRPHETMERPPI*GAQPPA
Trigger: GGCTGGCGGTTGCGCTCCTCAGATCGGCGGCCTTTC...CATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCTCTCCCACAAAGCCCTaGTCTGAGGGTCCAAGTACG +
Preference number: 4 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLSPTKP*SEGPST
Trigger: CGTACTTGGACCCTCAGATCAGGGCTTTGTGGGAGA...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR TCA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCAACTCCGGGGATACTTaGACCCATGGCTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLNSGDT*THGSSP
Trigger: AGGGGAAGAGCCATGGGTTCAAGTATCCCCGGAGTT...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR CCA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCGATACGCCCACTGGTTaGGACTCTGTTGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLDTPTG*DSVGFS
Trigger: GCTGAAGCCAACAGAGTCCCAACCAGTGGGCGTATC...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR TCA 90 bp GATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGGAAAGGCCGCCGATCTaGGGAGCGCAACCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: DSIRDVFYFPNITNERHKERPPI*GAQPPA
Trigger: GGCTGGCGGTTGCGCTCCTCAGATCGGCGGCCTTTC...CTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp ATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCATTAGAGATGTCGGTCTCCATGCCAAATaGGCCACAGGATCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: IPWLQIPTRFPHDSIRDVGLHAK*ATGSCL
Trigger: CAGGCAGGATCCTGTGGCTCATTTGGCATGGAGACC...GACATCTCTAATGGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp AGATTTTCCGGCACTATCCTTAAACTCCGGGGATACTTGAACCCATGGCTCTTCTGTGGATGGTGCTTCTaGATCTGGGTCTGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RFSGTILKLRGYLNPWLFCGWCF*IWVCVS
Trigger: GGAGACACAGACCCAGATGCAGAAGCACCATCCACA...GAAGAGCCATGGGTTCAAGTATCCCCGGAGTTTAAGGATAGTGCCGGAAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498240.6
CDS-3UTR CCA 90 bp GGAGAGATCAATACAAAGCCAACAATGTTTACTTCTGTGACCACAGAAGACTACCCAGCTTGGCTTCCGTaGAGGCCGCTCCTCGCTTTC +
Preference number: 4 (lower is better)
Translates to: GEINTKPTMFTSVTTEDYPAWLP*RPLLAF
Trigger: GAAAGCGAGGAGCGGCCTCCACGGAAGCCAAGCTGG...GTAGTCTTCTGTGGTCACAGAAGTAAACATTGTTGGCTTTGTATTGATCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp CCCATGATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCCCAGCTTGGCTTCCGTaGAGGCCGCTCCTCGCTTTC +
Preference number: 4 (lower is better)
Translates to: PMIPLEMSSIFQTSPMRGPAWLP*RPLLAF
Trigger: GAAAGCGAGGAGCGGCCTCCACGGAAGCCAAGCTGG...GCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATCATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCTTGGGATACGCCCACTaGTTGGGACTCTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLLGYAH*LGLCWL
Trigger: AAGCCAACAGAGTCCCAACCAGTGGGCGTATCCCAA...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR GCA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCCATGGCTCTTCCCCTTaGTCTAGACAGGAGATCACT +
Preference number: 4 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLHGSSP*SRQEIT
Trigger: AGTGATCTCCTGTCTAGAGCAAGGGGAAGAGCCATG...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR CCA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTTTGGGATACGCCCACTaGTTGGGACTCTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: CQAPFGECLQNEDTGQASLGYAH*LGLCWL
Trigger: AAGCCAACAGAGTCCCAACCAGTGGGCGTATCCCAA...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR CCA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTAGAGCACAAACAATGCTaGGACTCAGGCAAGACGTGC +
Preference number: 4 (lower is better)
Translates to: RPHETMEIGKPATVKRMVEHKQC*DSGKTC
Trigger: GCACGTCTTGCCTGAGTCCCAGCATTGTTTGTGCTC...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498240.6
CDS-3UTR CCA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCAATGTCAACAAGCTCTaGGACTCAGGCAAGACGTGC +
Preference number: 4 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLNVNKL*DSGKTC
Trigger: GCACGTCTTGCCTGAGTCCCAGAGCTTGTTGACATT...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR TCA 90 bp ATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGAGGCCGGAAGTGGAAGTaGCGCTTTCCGAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: IPLEMSSIFQTSPMRGIRGRKWK*RFPRVA
Trigger: CGCCACCCTCGGAAAGCGTCACTTCCACTTCCGGCC...TCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498240.6
CDS-3UTR TCA 90 bp GGAGAGATCAATACAAAGCCAACAATGTTTACTTCTGTGACCACAGAAGACTACCACAAAGCCCTGATCTaGGGGTCCAAGTACGCAGCC +
Preference number: 4 (lower is better)
Translates to: GEINTKPTMFTSVTTEDYHKALI*GSKYAA
Trigger: GGCTGCGTACTTGGACCCTCAGATCAGGGCTTTGTG...GTAGTCTTCTGTGGTCACAGAAGTAAACATTGTTGGCTTTGTATTGATCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR TCA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTACCCCATTCCATGTTTaGCCAGATTCCCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: CQAPFGECLQNEDTGQASTPFHV*PDSLCK
Trigger: CTTGCAGAGGGAATCTGGTCAAACATGGAATGGGGT...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR TCA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCAAAGCTAGAATCTGTTaGGTAGGCACAGCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLKARIC*VGTALS
Trigger: TGAGAGGGCTGTGCCTACTCAACAGATTCTAGCTTT...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR TCA 90 bp TGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAACTCCGGGGATACTTaGACCCATGGCTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: CNSFRPHETMEIGKPATVNSGDT*THGSSP
Trigger: AGGGGAAGAGCCATGGGTTCAAGTATCCCCGGAGTT...CACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp CATCTAATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCGGAACCGTCTCCTGCTaGCTACATGTCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HLIYIPWLQIPTRFPHDSGTVSC*LHVQVS
Trigger: GGAGACCTGGACATGTAGTCAGCAGGAGACGGTTCC...GGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATATTAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTAATGCTCTGTGGATGGTaGTTCTGCATCTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: RPHETMEIGKPATVKRMVMLCGW*FCIWVC
Trigger: ACAGACCCAGATGCAGAAGCACCATCCACAGAGCAT...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCCTGCTGAGCTGTTCTTaGAGACCCTCGTATGTATTC +
Preference number: 4 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLLLSCS*RPSYVF
Trigger: GAATACATACGAGGGTCTGCAAGAACAGCTCAGCAG...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR TCA 90 bp CAAACAATGACCTACCTAATCCATCTAATTTCTCAACTAACTGCCACCATCTCTCACAAAGCCCTGATCTaGGGGTCCAAGTACGCAGCC +
Preference number: 4 (lower is better)
Translates to: QTMTYLIHLISQLTATISHKALI*GSKYAA
Trigger: GGCTGCGTACTTGGACCCTCAGATCAGGGCTTTGTG...AGAGATGGTGGCAGTTAGTTGAGAAATTAGATGGATTAGGTAGGTCATTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR TCA 90 bp CTGCTTTATCCTACTGACATTGCAAGGCAGGGATTAACAAGTCTAGTTTCTTTTCACAAAGCCCTGATCTaGGGGTCCAAGTACGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLYPTDIARQGLTSLVSFHKALI*GSKYAA
Trigger: GGCTGCGTACTTGGACCCTCAGATCAGGGCTTTGTG...AAAAGAAACTAGACTTGTTAATCCCTGCCTTGCAATGTCAGTAGGATAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669516.2
CDS-3UTR TCA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTTATGAGTATTCCTGCTaGGCTGTTCTTGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: CQAPFGECLQNEDTGQASYEYSC*AVLADP
Trigger: AGGGTCTGCAAGAACAGCTCAGCAGGAATACTCATA...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR TCA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTAGGCTCAGTCTCTTTATaGGTATTCCTGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RPHETMEIGKPATVKRMVGSVSL*VFLLSC
Trigger: ACAGCTCAGCAGGAATACTCATAAAGAGACTGAGCC...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTGGCTCAGTCTCTTTATaGGTATTCCTGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: CQAPFGECLQNEDTGQASGSVSL*VFLLSC
Trigger: ACAGCTCAGCAGGAATACTCATAAAGAGACTGAGCC...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR TCA 90 bp TTGCCGAAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTAACTCCGGGGATACTTaGACCCATGGCTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LPKSLRRNSSDVQLCKPCNSGDT*THGSSP
Trigger: AGGGGAAGAGCCATGGGTTCAAGTATCCCCGGAGTT...ACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTTCGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp AAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGGGTCTCCATGCCAAATaGGCCACAGGATCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KSLRRNSSDVQLCKPCPMGLHAK*ATGSCL
Trigger: CAGGCAGGATCCTGTGGCTCATTTGGCATGGAGACC...CATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp ATCCAATTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGGGAACCGTCTCCTGCTaGCTACATGTCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IQFGSWNTLHCNSFRPHEGTVSC*LHVQVS
Trigger: GGAGACCTGGACATGTAGTCAGCAGGAGACGGTTCC...CTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAATTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp AGATTTTCCGGCACTATCCTTAAACTCCGGGGATACTTGAACCCATGGCTCTTCCTACCATCATCATTCTaGTCTAGGAAGTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RFSGTILKLRGYLNPWLFLPSSF*SRKFCS
Trigger: GGAGCAGAACTTCCTAGAGCAGAATGATGATGGTAG...GAAGAGCCATGGGTTCAAGTATCCCCGGAGTTTAAGGATAGTGCCGGAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498240.6
CDS-3UTR GCA 90 bp TACAGGCACCGGTCATCATGCCCAGCTAATTTGTTTATTTTTGTAGAGAGAGGGATGCTCTGTGGATGGTaGTTCTGCATCTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: YRHRSSCPANLFIFVERGMLCGW*FCIWVC
Trigger: ACAGACCCAGATGCAGAAGCACCATCCACAGAGCAT...CCCTCTCTCTACAAAAATAAACAAATTAGCTGGGCATGATGACCGGTGCCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR GCA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCACTGGAAAATCTTGGTaGCATTTTCCCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLTGKSW*HFPTLC
Trigger: GCACAGAGTGGGAAAATGGCACCAAGATTTTCCAGT...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR CCA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCCAAAATTCTTCATCTTaGGATACGCCCACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLQNSSS*DTPTGW
Trigger: CCAACCAGTGGGCGTATCCCAAGATGAAGAATTTTG...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR TCA 90 bp AGAGAATGGTATGCAATTAAACATGCATGTTACTGCTTTTTGTTTTGGAAGACCCCGCTCCTCGCTTTCTaGGGCTCAAACGCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: REWYAIKHACYCFLFWKTPLLAF*GSNASH
Trigger: GTGGCTTGCGTTTGAGCCTCAGAAAGCGAGGAGCGG...GGTCTTCCAAAACAAAAAGCAGTAACATGCATGTTTAATTGCATACCATTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp CAAACAATGACCTACCTAATCCATCTAATTTCTCAACTAACTGCCACCATCTCTTCTCCCACAAAGCCCTaGTCTGAGGGTCCAAGTACG +
Preference number: 4 (lower is better)
Translates to: QTMTYLIHLISQLTATISSPTKP*SEGPST
Trigger: CGTACTTGGACCCTCAGATCAGGGCTTTGTGGGAGA...AGAGATGGTGGCAGTTAGTTGAGAAATTAGATGGATTAGGTAGGTCATTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR TCA 90 bp ATCCAATTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGTCTCCCACAAAGCCCTaGTCTGAGGGTCCAAGTACG +
Preference number: 4 (lower is better)
Translates to: IQFGSWNTLHCNSFRPHESPTKP*SEGPST
Trigger: CGTACTTGGACCCTCAGATCAGGGCTTTGTGGGAGA...CTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAATTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR TCA 90 bp AGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGACAAAAGAAAGAATTCTTGAAGTTTGCTaGCAGCCTCACGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RNSSDVQLCKPCPMTKERILEVC*QPHGVH
Trigger: GTGGACCCCGTGAGGCTGTCAGCAAACTTCAAGAAT...TCTTTCTTTTGTCATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TACAGGCACCGGTCATCATGCCCAGCTAATTTGTTTATTTTTGTAGAGAGAGGGGTGAAATTCCGGAAGTaGCAGCAAGAGCTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: YRHRSSCPANLFIFVERGVKFRK*QQELLG
Trigger: TCCTAAGAGCTCTTGCTGGCACTTCCGGAATTTCAC...CCCTCTCTCTACAAAAATAAACAAATTAGCTGGGCATGATGACCGGTGCCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR GCA 90 bp TACAGGCACCGGTCATCATGCCCAGCTAATTTGTTTATTTTTGTAGAGAGAGGGCTCACGGGGTCCACCTaGTTCATCATAGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: YRHRSSCPANLFIFVERGLTGST*FIIGEI
Trigger: AATTTCACCTATGATGAAGCAGGTGGACCCCGTGAG...CCCTCTCTCTACAAAAATAAACAAATTAGCTGGGCATGATGACCGGTGCCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR GCA 90 bp CATCTAATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCCCACAGCCTCCTCAATaGTCTGTGGATGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HLIYIPWLQIPTRFPHDSPQPPQ*SVDGAS
Trigger: AGAAGCACCATCCACAGAGCATTGAGGAGGCTGTGG...GGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATATTAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp GGAGAGATCAATACAAAGCCAACAATGTTTACTTCTGTGACCACAGAAGACTACCCACAGCCTCCTCAATaGTCTGTGGATGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GEINTKPTMFTSVTTEDYPQPPQ*SVDGAS
Trigger: AGAAGCACCATCCACAGAGCATTGAGGAGGCTGTGG...GTAGTCTTCTGTGGTCACAGAAGTAAACATTGTTGGCTTTGTATTGATCTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTGGGGAGCACAAACAATaGTGGGACTCAGGCAAGACG +
Preference number: 4 (lower is better)
Translates to: LHCNSFRPHETMEIGKPAGEHKQ*WDSGKT
Trigger: CGTCTTGCCTGAGTCCCAGCATTGTTTGTGCTCCCC...AGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498240.6
CDS-3UTR CCA 90 bp AGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGACAAAAGAAAGATTGGGATACGCCCACTaGTTGGGACTCTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RNSSDVQLCKPCPMTKERLGYAH*LGLCWL
Trigger: AAGCCAACAGAGTCCCAACCAGTGGGCGTATCCCAA...TCTTTCTTTTGTCATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTTTGCCTGCTGTTTTCTaGGGAACTTTTACTTTGGCC +
Preference number: 4 (lower is better)
Translates to: CQAPFGECLQNEDTGQASLPAVF*GTFTLA
Trigger: GGCCAAAGTAAAAGTTCCCCAGAAAACAGCAGGCAA...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR TCA 90 bp AAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGATTCTTGAAGTTTGCTaGCAGCCTCACGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: KSLRRNSSDVQLCKPCPMILEVC*QPHGVH
Trigger: GTGGACCCCGTGAGGCTGTCAGCAAACTTCAAGAAT...CATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR TCA 90 bp AGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGACAAAAGAAAGAACCCCATTCCATGTTTaGCCAGATTCCCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: RNSSDVQLCKPCPMTKERTPFHV*PDSLCK
Trigger: CTTGCAGAGGGAATCTGGTCAAACATGGAATGGGGT...TCTTTCTTTTGTCATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR TCA 90 bp TGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGGGCTCAGTCTCTTTATaGGTATTCCTGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: CNSFRPHETMEIGKPATVGSVSL*VFLLSC
Trigger: ACAGCTCAGCAGGAATACTCATAAAGAGACTGAGCC...CACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp ATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGTGAACTCCGGGGATACTTaGACCCATGGCTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: IRDVFYFPNITNERHKTVNSGDT*THGSSP
Trigger: AGGGGAAGAGCCATGGGTTCAAGTATCCCCGGAGTT...CACTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTGCACAATCTTTCTTGTaGCGATCCATAAGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: CQAPFGECLQNEDTGQASAQSFL*RSISLS
Trigger: GCTCAAACTTATGGATCGTCACAAGAAAGATTGTGC...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR GCA 90 bp TACAGGCACCGGTCATCATGCCCAGCTAATTTGTTTATTTTTGTAGAGAGAGGGCTACCATCATCATTCTaGTCTAGGAAGTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YRHRSSCPANLFIFVERGLPSSF*SRKFCS
Trigger: GGAGCAGAACTTCCTAGAGCAGAATGATGATGGTAG...CCCTCTCTCTACAAAAATAAACAAATTAGCTGGGCATGATGACCGGTGCCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR GCA 90 bp CCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGTGTGGATGGTGCTTCTaGATCTGGGTCTGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLEMSSIFQTSPMRGIRQCGWCF*IWVCVS
Trigger: GGAGACACAGACCCAGATGCAGAAGCACCATCCACA...CTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp CCCATGATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATGCTCTGTGGATGGTaGTTCTGCATCTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PMIPLEMSSIFQTSPMRGMLCGW*FCIWVC
Trigger: ACAGACCCAGATGCAGAAGCACCATCCACAGAGCAT...GCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATCATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp GGAGAGATCAATACAAAGCCAACAATGTTTACTTCTGTGACCACAGAAGACTACTCCCAGCTCATGGACTaGAACCCCATTCCATGTTTG +
Preference number: 4 (lower is better)
Translates to: GEINTKPTMFTSVTTEDYSQLMD*NPIPCL
Trigger: CAAACATGGAATGGGGTTGCAGTCCATGAGCTGGGA...GTAGTCTTCTGTGGTCACAGAAGTAAACATTGTTGGCTTTGTATTGATCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCAAAAGGCTTCTCTCTTaGACAATCTTTCTTGTGACG +
Preference number: 4 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLKRLLS*TIFLVT
Trigger: CGTCACAAGAAAGATTGTGCAAGAGAGAAGCCTTTT...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR GCA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTAAGACTACTGAGTGGCTaGAGAGCAAGTCTTGATTAT +
Preference number: 4 (lower is better)
Translates to: RPHETMEIGKPATVKRMVRLLSG*RASLDY
Trigger: ATAATCAAGACTTGCTCTGCAGCCACTCAGTAGTCT...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp CATCTAATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCTCAATGCTCTGTGGATaGTGCTTCTGCATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HLIYIPWLQIPTRFPHDSSMLCG*CFCIWV
Trigger: GACCCAGATGCAGAAGCACCATCCACAGAGCATTGA...GGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATATTAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR CCA 90 bp CATCTAATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCCTCCTCAATGCTCTGTaGATGGTGCTTCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: HLIYIPWLQIPTRFPHDSLLNAL*MVLLHL
Trigger: CAGATGCAGAAGCACCATCCACAGAGCATTGAGGAG...GGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATATTAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR CCA 90 bp TGCATTAATAGTTCATCTGGAGATTCCCTAGTGGTGGTTAACAAGATTTCATCAGATACGCCCACTGGTTaGGACTCTGTTGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CINSSSGDSLVVVNKISSDTPTG*DSVGFS
Trigger: GCTGAAGCCAACAGAGTCCCAACCAGTGGGCGTATC...TGATGAAATCTTGTTAACCACCACTAGGGAATCTCCAGATGAACTATTAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp ATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGTGGATACGCCCACTGGTTaGGACTCTGTTGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: IRDVFYFPNITNERHKTVDTPTG*DSVGFS
Trigger: GCTGAAGCCAACAGAGTCCCAACCAGTGGGCGTATC...CACTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp ATCCAATTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGTTGGGATACGCCCACTaGTTGGGACTCTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: IQFGSWNTLHCNSFRPHELGYAH*LGLCWL
Trigger: AAGCCAACAGAGTCCCAACCAGTGGGCGTATCCCAA...CTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAATTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTATTCACTGGAAAATCTTaGTGCCATTTTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: RPHETMEIGKPATVKRMVFTGKS*CHFPTL
Trigger: CAGAGTGGGAAAATGGCACCAAGATTTTCCAGTGAA...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTTTCACTGGAAAATCTTaGTGCCATTTTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: CQAPFGECLQNEDTGQASFTGKS*CHFPTL
Trigger: CAGAGTGGGAAAATGGCACCAAGATTTTCCAGTGAA...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR TCA 90 bp TTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTCTGCTTCATCATAGGTaGAATTCCGGAAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LHCNSFRPHETMEIGKPALLHHR*NSGSAS
Trigger: GCTGGCACTTCCGGAATTTCACCTATGATGAAGCAG...AGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR TCA 90 bp CAAACAATGACCTACCTAATCCATCTAATTTCTCAACTAACTGCCACCATCTCTCTGCTTCATCATAGGTaGAATTCCGGAAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QTMTYLIHLISQLTATISLLHHR*NSGSAS
Trigger: GCTGGCACTTCCGGAATTTCACCTATGATGAAGCAG...AGAGATGGTGGCAGTTAGTTGAGAAATTAGATGGATTAGGTAGGTCATTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR TCA 90 bp CTGCTTTATCCTACTGACATTGCAAGGCAGGGATTAACAAGTCTAGTTTCTTTTCTGCTTCATCATAGGTaGAATTCCGGAAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLYPTDIARQGLTSLVSFLLHHR*NSGSAS
Trigger: GCTGGCACTTCCGGAATTTCACCTATGATGAAGCAG...AAAAGAAACTAGACTTGTTAATCCCTGCCTTGCAATGTCAGTAGGATAAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669516.2
CDS-3UTR TCA 90 bp CAAACAATGACCTACCTAATCCATCTAATTTCTCAACTAACTGCCACCATCTCTACCCCATTCCATGTTTaGCCAGATTCCCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: QTMTYLIHLISQLTATISTPFHV*PDSLCK
Trigger: CTTGCAGAGGGAATCTGGTCAAACATGGAATGGGGT...AGAGATGGTGGCAGTTAGTTGAGAAATTAGATGGATTAGGTAGGTCATTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR TCA 90 bp CATCTAATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCGGCTCAGTCTCTTTATaGGTATTCCTGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HLIYIPWLQIPTRFPHDSGSVSL*VFLLSC
Trigger: ACAGCTCAGCAGGAATACTCATAAAGAGACTGAGCC...GGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATATTAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp CCCATGATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCGCTGCTTTATCCTACTaGCATTGCAAGGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: PMIPLEMSSIFQTSPMRGAALSY*HCKAGI
Trigger: AATCCCTGCCTTGCAATGTCAGTAGGATAAAGCAGC...GCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATCATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp TTGCCGAAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTGCTGCTTTATCCTACTaGCATTGCAAGGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: LPKSLRRNSSDVQLCKPCAALSY*HCKAGI
Trigger: AATCCCTGCCTTGCAATGTCAGTAGGATAAAGCAGC...ACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTTCGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp AGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGACAAAAGAAAGATGCTCTAGGAAGTTCTaGTCCTGTGTTAAGACACCC +
Preference number: 4 (lower is better)
Translates to: RNSSDVQLCKPCPMTKERCSRKF*SCVKTP
Trigger: GGGTGTCTTAACACAGGAGCAGAACTTCCTAGAGCA...TCTTTCTTTTGTCATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp AGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGACAAAAGAAAGAGTGAAATTCCGGAAGTaGCAGCAAGAGCTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: RNSSDVQLCKPCPMTKERVKFRK*QQELLG
Trigger: TCCTAAGAGCTCTTGCTGGCACTTCCGGAATTTCAC...TCTTTCTTTTGTCATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp ATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCATTAGATCCCAGCTCATGGACTaGAACCCCATTCCATGTTTG +
Preference number: 4 (lower is better)
Translates to: IYIPWLQIPTRFPHDSIRSQLMD*NPIPCL
Trigger: CAAACATGGAATGGGGTTGCAGTCCATGAGCTGGGA...TCTAATGGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TTGCCGAAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCTGCTGAGCTGTTCTTaGAGACCCTCGTATGTATTC +
Preference number: 4 (lower is better)
Translates to: LPKSLRRNSSDVQLCKPCLLSCS*RPSYVF
Trigger: GAATACATACGAGGGTCTGCAAGAACAGCTCAGCAG...ACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTTCGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp AGACAGTGCATTAATAGTTCATCTGGAGATTCCCTAGTGGTGGTTAACAAGATTCATGGCTCTTCCCCTTaGTCTAGACAGGAGATCACT +
Preference number: 4 (lower is better)
Translates to: RQCINSSSGDSLVVVNKIHGSSP*SRQEIT
Trigger: AGTGATCTCCTGTCTAGAGCAAGGGGAAGAGCCATG...AATCTTGTTAACCACCACTAGGGAATCTCCAGATGAACTATTAATGCACTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTAAAAGGCTTCTCTCTTaGACAATCTTTCTTGTGACG +
Preference number: 4 (lower is better)
Translates to: CQAPFGECLQNEDTGQASKRLLS*TIFLVT
Trigger: CGTCACAAGAAAGATTGTGCAAGAGAGAAGCCTTTT...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR GCA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTTTTGGAAGACCATGCTaGCAATGTTTCTATTGGATG +
Preference number: 4 (lower is better)
Translates to: CQAPFGECLQNEDTGQASFGRPC*QCFYWM
Trigger: CATCCAATAGAAACATTGGCAGCATGGTCTTCCAAA...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp ATCCAATTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGATGTCCAGGTCTCCATaGCAAATGAGCCACAGGATC +
Preference number: 4 (lower is better)
Translates to: IQFGSWNTLHCNSFRPHEMSRSP*QMSHRI
Trigger: GATCCTGTGGCTCATTTGGCATGGAGACCTGGACAT...CTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAATTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGATGTCCAGGTCTCCATaGCAAATGAGCCACAGGATC +
Preference number: 4 (lower is better)
Translates to: FGSWNTLHCNSFRPHETMMSRSP*QMSHRI
Trigger: GATCCTGTGGCTCATTTGGCATGGAGACCTGGACAT...CATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp CAAACAATGACCTACCTAATCCATCTAATTTCTCAACTAACTGCCACCATCTCTTCAATGCTCTGTGGATaGTGCTTCTGCATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: QTMTYLIHLISQLTATISSMLCG*CFCIWV
Trigger: GACCCAGATGCAGAAGCACCATCCACAGAGCATTGA...AGAGATGGTGGCAGTTAGTTGAGAAATTAGATGGATTAGGTAGGTCATTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR CCA 90 bp CTGCTTTATCCTACTGACATTGCAAGGCAGGGATTAACAAGTCTAGTTTCTTTTTCAATGCTCTGTGGATaGTGCTTCTGCATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LLYPTDIARQGLTSLVSFSMLCG*CFCIWV
Trigger: GACCCAGATGCAGAAGCACCATCCACAGAGCATTGA...AAAAGAAACTAGACTTGTTAATCCCTGCCTTGCAATGTCAGTAGGATAAAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669516.2
CDS-3UTR CCA 90 bp TTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGCTCCTCAATGCTCTGTaGATGGTGCTTCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: FGSWNTLHCNSFRPHETMLLNAL*MVLLHL
Trigger: CAGATGCAGAAGCACCATCCACAGAGCATTGAGGAG...CATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR CCA 90 bp TTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGTCCTTTCCCAGCTCATaGACTGCAACCCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: FGSWNTLHCNSFRPHETMSFPSS*TATPFH
Trigger: ATGGAATGGGGTTGCAGTCCATGAGCTGGGAAAGGA...CATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR CCA 90 bp AAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGTCCTTTCCCAGCTCATaGACTGCAACCCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: KSLRRNSSDVQLCKPCPMSFPSS*TATPFH
Trigger: ATGGAATGGGGTTGCAGTCCATGAGCTGGGAAAGGA...CATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR CCA 90 bp TGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGTTGCCTGCTGTTTTCTaGGGAACTTTTACTTTGGCC +
Preference number: 4 (lower is better)
Translates to: CNSFRPHETMEIGKPATVLPAVF*GTFTLA
Trigger: GGCCAAAGTAAAAGTTCCCCAGAAAACAGCAGGCAA...CACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp ATCCAATTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGTATGAGTATTCCTGCTaGGCTGTTCTTGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: IQFGSWNTLHCNSFRPHEYEYSC*AVLADP
Trigger: AGGGTCTGCAAGAACAGCTCAGCAGGAATACTCATA...CTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAATTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp CTGCTTTATCCTACTGACATTGCAAGGCAGGGATTAACAAGTCTAGTTTCTTTTTATGAGTATTCCTGCTaGGCTGTTCTTGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: LLYPTDIARQGLTSLVSFYEYSC*AVLADP
Trigger: AGGGTCTGCAAGAACAGCTCAGCAGGAATACTCATA...AAAAGAAACTAGACTTGTTAATCCCTGCCTTGCAATGTCAGTAGGATAAAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp ATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCATTAGATATGAGTATTCCTGCTaGGCTGTTCTTGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: IYIPWLQIPTRFPHDSIRYEYSC*AVLADP
Trigger: AGGGTCTGCAAGAACAGCTCAGCAGGAATACTCATA...TCTAATGGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp ATCCAATTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGAAAGCTAGAATCTGTTaGGTAGGCACAGCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: IQFGSWNTLHCNSFRPHEKARIC*VGTALS
Trigger: TGAGAGGGCTGTGCCTACTCAACAGATTCTAGCTTT...CTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAATTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTTGCTCTAGGAAGTTCTaGTCCTGTGTTAAGACACCC +
Preference number: 4 (lower is better)
Translates to: LHCNSFRPHETMEIGKPACSRKF*SCVKTP
Trigger: GGGTGTCTTAACACAGGAGCAGAACTTCCTAGAGCA...AGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp ATCCAATTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGCTCACGGGGTCCACCTaGTTCATCATAGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: IQFGSWNTLHCNSFRPHELTGST*FIIGEI
Trigger: AATTTCACCTATGATGAAGCAGGTGGACCCCGTGAG...CTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAATTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp ATAAATTTTAGTGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGCTGCTGAGCTGTTCTTaGAGACCCTCGTATGTATTC +
Preference number: 4 (lower is better)
Translates to: INFSAKLHLVNVFRMRTLLLSCS*RPSYVF
Trigger: GAATACATACGAGGGTCTGCAAGAACAGCTCAGCAG...CAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCACTAAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp GATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGCATGGCTCTTCCCCTTaGTCTAGACAGGAGATCACT +
Preference number: 4 (lower is better)
Translates to: DSIRDVFYFPNITNERHKHGSSP*SRQEIT
Trigger: AGTGATCTCCTGTCTAGAGCAAGGGGAAGAGCCATG...CTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTCATGGCTCTTCCCCTTaGTCTAGACAGGAGATCACT +
Preference number: 4 (lower is better)
Translates to: WNTLHCNSFRPHETMEIGHGSSP*SRQEIT
Trigger: AGTGATCTCCTGTCTAGAGCAAGGGGAAGAGCCATG...ACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp CATCTAATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCACTGGAAAATCTTGGTaGCATTTTCCCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: HLIYIPWLQIPTRFPHDSTGKSW*HFPTLC
Trigger: GCACAGAGTGGGAAAATGGCACCAAGATTTTCCAGT...GGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATATTAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp GGAGAGATCAATACAAAGCCAACAATGTTTACTTCTGTGACCACAGAAGACTACACTGGAAAATCTTGGTaGCATTTTCCCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GEINTKPTMFTSVTTEDYTGKSW*HFPTLC
Trigger: GCACAGAGTGGGAAAATGGCACCAAGATTTTCCAGT...GTAGTCTTCTGTGGTCACAGAAGTAAACATTGTTGGCTTTGTATTGATCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCTGGTGTGTTGTTAAGTaGTTATTAAGATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLWCVVK*LLRSEL
Trigger: GAGTTCAGATCTTAATAAGCACTTAACAACACACCA...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR CCA 90 bp CATCTAATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCTTGCCTGCTGTTTTCTaGGGAACTTTTACTTTGGCC +
Preference number: 4 (lower is better)
Translates to: HLIYIPWLQIPTRFPHDSLPAVF*GTFTLA
Trigger: GGCCAAAGTAAAAGTTCCCCAGAAAACAGCAGGCAA...GGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATATTAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTGTGTTCAAAAATGACTaGAGAGATCAATACAAAGCC +
Preference number: 4 (lower is better)
Translates to: CQAPFGECLQNEDTGQASVFKND*RDQYKA
Trigger: GGCTTTGTATTGATCTCTCCAGTCATTTTTGAACAC...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp AGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGACAAAAGAAAGAACCACGTTTAACAAATaGGATCCTGTCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RNSSDVQLCKPCPMTKERTTFNK*DPVWSC
Trigger: ACAAGACCAGACAGGATCTCATTTGTTAAACGTGGT...TCTTTCTTTTGTCATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR TCA 90 bp GATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGAAAGCTAGAATCTGTTaGGTAGGCACAGCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: DSIRDVFYFPNITNERHKKARIC*VGTALS
Trigger: TGAGAGGGCTGTGCCTACTCAACAGATTCTAGCTTT...CTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp TGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAAGCTAGAATCTGTTaGGTAGGCACAGCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: WNTLHCNSFRPHETMEIGKARIC*VGTALS
Trigger: TGAGAGGGCTGTGCCTACTCAACAGATTCTAGCTTT...ACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp CATCTAATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCGCACAATCTTTCTTGTaGCGATCCATAAGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: HLIYIPWLQIPTRFPHDSAQSFL*RSISLS
Trigger: GCTCAAACTTATGGATCGTCACAAGAAAGATTGTGC...GGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATATTAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp AGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGACAAAAGAAAGAAAGAAGGAACTCAAGTaGTGTCCAACTTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: RNSSDVQLCKPCPMTKERKKELK*CPTLQT
Trigger: GGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTT...TCTTTCTTTTGTCATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp ATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGTGCTCACGGGGTCCACCTaGTTCATCATAGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: IRDVFYFPNITNERHKTVLTGST*FIIGEI
Trigger: AATTTCACCTATGATGAAGCAGGTGGACCCCGTGAG...CACTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp GATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGCTGCTGAGCTGTTCTTaGAGACCCTCGTATGTATTC +
Preference number: 4 (lower is better)
Translates to: DSIRDVFYFPNITNERHKLLSCS*RPSYVF
Trigger: GAATACATACGAGGGTCTGCAAGAACAGCTCAGCAG...CTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp ATCCAATTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTGGAAAATCTTGGTaGCATTTTCCCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: IQFGSWNTLHCNSFRPHETGKSW*HFPTLC
Trigger: GCACAGAGTGGGAAAATGGCACCAAGATTTTCCAGT...CTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAATTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTATGGTGTGTTGTTAAGTaGTTATTAAGATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: RPHETMEIGKPATVKRMVWCVVK*LLRSEL
Trigger: GAGTTCAGATCTTAATAAGCACTTAACAACACACCA...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp CCCATGATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCAGTGATGTCCAACTTTaGAAACCGTGTCCAATGACA +
Preference number: 4 (lower is better)
Translates to: PMIPLEMSSIFQTSPMRGSDVQL*KPCPMT
Trigger: TGTCATTGGACACGGTTTGCAAAGTTGGACATCACT...GCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATCATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp ATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCATTAGACAAAATTCTTCATCTTaGGATACGCCCACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: IYIPWLQIPTRFPHDSIRQNSSS*DTPTGW
Trigger: CCAACCAGTGGGCGTATCCCAAGATGAAGAATTTTG...TCTAATGGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp AGACAGTGCATTAATAGTTCATCTGGAGATTCCCTAGTGGTGGTTAACAAGATTCAAAATTCTTCATCTTaGGATACGCCCACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: RQCINSSSGDSLVVVNKIQNSSS*DTPTGW
Trigger: CCAACCAGTGGGCGTATCCCAAGATGAAGAATTTTG...AATCTTGTTAACCACCACTAGGGAATCTCCAGATGAACTATTAATGCACTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp ATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGAAATGTCAACAAGCTCTaGGACTCAGGCAAGACGTGC +
Preference number: 4 (lower is better)
Translates to: IPLEMSSIFQTSPMRGIRNVNKL*DSGKTC
Trigger: GCACGTCTTGCCTGAGTCCCAGAGCTTGTTGACATT...TCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp CAAACAATGACCTACCTAATCCATCTAATTTCTCAACTAACTGCCACCATCTCTACCACGTTTAACAAATaGGATCCTGTCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QTMTYLIHLISQLTATISTTFNK*DPVWSC
Trigger: ACAAGACCAGACAGGATCTCATTTGTTAAACGTGGT...AGAGATGGTGGCAGTTAGTTGAGAAATTAGATGGATTAGGTAGGTCATTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR TCA 90 bp AAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGGCACAATCTTTCTTGTaGCGATCCATAAGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: KSLRRNSSDVQLCKPCPMAQSFL*RSISLS
Trigger: GCTCAAACTTATGGATCGTCACAAGAAAGATTGTGC...CATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp AAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGGTAAGCCTGCTACTGTaGAGAGAATGGTATGCAATT +
Preference number: 4 (lower is better)
Translates to: KSLRRNSSDVQLCKPCPMVSLLL*REWYAI
Trigger: AATTGCATACCATTCTCTTCACAGTAGCAGGCTTAC...CATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp CTGCTTTATCCTACTGACATTGCAAGGCAGGGATTAACAAGTCTAGTTTCTTTTGTAAGCCTGCTACTGTaGAGAGAATGGTATGCAATT +
Preference number: 4 (lower is better)
Translates to: LLYPTDIARQGLTSLVSFVSLLL*REWYAI
Trigger: AATTGCATACCATTCTCTTCACAGTAGCAGGCTTAC...AAAAGAAACTAGACTTGTTAATCCCTGCCTTGCAATGTCAGTAGGATAAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp CAAACAATGACCTACCTAATCCATCTAATTTCTCAACTAACTGCCACCATCTCTTGCATCCAGCCTCCCTaGCTCTTTATTACCTTTTAT +
Preference number: 4 (lower is better)
Translates to: QTMTYLIHLISQLTATISCIQPP*LFITFY
Trigger: ATAAAAGGTAATAAAGAGTCAGGGAGGCTGGATGCA...AGAGATGGTGGCAGTTAGTTGAGAAATTAGATGGATTAGGTAGGTCATTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR GCA 90 bp ATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGAGTGAAATTCCGGAAGTaGCAGCAAGAGCTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: IPLEMSSIFQTSPMRGIRVKFRK*QQELLG
Trigger: TCCTAAGAGCTCTTGCTGGCACTTCCGGAATTTCAC...TCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR GCA 90 bp CATCTAATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCAAAAGGCTTCTCTCTTaGACAATCTTTCTTGTGACG +
Preference number: 4 (lower is better)
Translates to: HLIYIPWLQIPTRFPHDSKRLLS*TIFLVT
Trigger: CGTCACAAGAAAGATTGTGCAAGAGAGAAGCCTTTT...GGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATATTAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp CATCTAATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCTTTGGAAGACCATGCTaGCAATGTTTCTATTGGATG +
Preference number: 4 (lower is better)
Translates to: HLIYIPWLQIPTRFPHDSFGRPC*QCFYWM
Trigger: CATCCAATAGAAACATTGGCAGCATGGTCTTCCAAA...GGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATATTAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTAGTGATGTCCAACTTTaGAAACCGTGTCCAATGACA +
Preference number: 4 (lower is better)
Translates to: LHCNSFRPHETMEIGKPASDVQL*KPCPMT
Trigger: TGTCATTGGACACGGTTTGCAAAGTTGGACATCACT...AGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TACAGGCACCGGTCATCATGCCCAGCTAATTTGTTTATTTTTGTAGAGAGAGGGAATTTCTCAACTAACTaGCACCATCTCTACTATATC +
Preference number: 4 (lower is better)
Translates to: YRHRSSCPANLFIFVERGNFSTN*HHLYYI
Trigger: GATATAGTAGAGATGGTGGCAGTTAGTTGAGAAATT...CCCTCTCTCTACAAAAATAAACAAATTAGCTGGGCATGATGACCGGTGCCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR CCA 90 bp TGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTTTGCCTGCTGTTTTCTaGGGAACTTTTACTTTGGCC +
Preference number: 4 (lower is better)
Translates to: WNTLHCNSFRPHETMEIGLPAVF*GTFTLA
Trigger: GGCCAAAGTAAAAGTTCCCCAGAAAACAGCAGGCAA...ACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp CCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGTTCACTGGAAAATCTTaGTGCCATTTTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: PLEMSSIFQTSPMRGIRQFTGKS*CHFPTL
Trigger: CAGAGTGGGAAAATGGCACCAAGATTTTCCAGTGAA...CTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp TTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGTTCACTGGAAAATCTTaGTGCCATTTTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: FGSWNTLHCNSFRPHETMFTGKS*CHFPTL
Trigger: CAGAGTGGGAAAATGGCACCAAGATTTTCCAGTGAA...CATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp TGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGGTGTTCAAAAATGACTaGAGAGATCAATACAAAGCC +
Preference number: 4 (lower is better)
Translates to: CNSFRPHETMEIGKPATVVFKND*RDQYKA
Trigger: GGCTTTGTATTGATCTCTCCAGTCATTTTTGAACAC...CACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp ATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGTGACCACGTTTAACAAATaGGATCCTGTCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: IRDVFYFPNITNERHKTVTTFNK*DPVWSC
Trigger: ACAAGACCAGACAGGATCTCATTTGTTAAACGTGGT...CACTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR TCA 90 bp TGCATTAATAGTTCATCTGGAGATTCCCTAGTGGTGGTTAACAAGATTTCATCAGTAAGCCTGCTACTGTaGAGAGAATGGTATGCAATT +
Preference number: 4 (lower is better)
Translates to: CINSSSGDSLVVVNKISSVSLLL*REWYAI
Trigger: AATTGCATACCATTCTCTTCACAGTAGCAGGCTTAC...TGATGAAATCTTGTTAACCACCACTAGGGAATCTCCAGATGAACTATTAATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp GATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGAAGAAGGAACTCAAGTaGTGTCCAACTTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: DSIRDVFYFPNITNERHKKKELK*CPTLQT
Trigger: GGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTT...CTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGTGGTGTGTTGTTAAGTaGTTATTAAGATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: CNSFRPHETMEIGKPATVWCVVK*LLRSEL
Trigger: GAGTTCAGATCTTAATAAGCACTTAACAACACACCA...CACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAGACTACTGAGTGGCTaGAGAGCAAGTCTTGATTAT +
Preference number: 4 (lower is better)
Translates to: WNTLHCNSFRPHETMEIGRLLSG*RASLDY
Trigger: ATAATCAAGACTTGCTCTGCAGCCACTCAGTAGTCT...ACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp GATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGAGACTACTGAGTGGCTaGAGAGCAAGTCTTGATTAT +
Preference number: 4 (lower is better)
Translates to: DSIRDVFYFPNITNERHKRLLSG*RASLDY
Trigger: ATAATCAAGACTTGCTCTGCAGCCACTCAGTAGTCT...CTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp ATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCATTAGATTTGGAAGACCATGCTaGCAATGTTTCTATTGGATG +
Preference number: 4 (lower is better)
Translates to: IYIPWLQIPTRFPHDSIRFGRPC*QCFYWM
Trigger: CATCCAATAGAAACATTGGCAGCATGGTCTTCCAAA...TCTAATGGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAACATGCATGTTACTaGTTTTTGTTTTGGAAGACC +
Preference number: 4 (lower is better)
Translates to: CNSFRPHETMEIGKPATVKHACY*FLFWKT
Trigger: GGTCTTCCAAAACAAAAAGCAGTAACATGCATGTTT...CACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAGTGATGTCCAACTTTaGAAACCGTGTCCAATGACA +
Preference number: 4 (lower is better)
Translates to: WNTLHCNSFRPHETMEIGSDVQL*KPCPMT
Trigger: TGTCATTGGACACGGTTTGCAAAGTTGGACATCACT...ACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp AGAGAATGGTATGCAATTAAACATGCATGTTACTGCTTTTTGTTTTGGAAGACCCAAAATTCTTCATCTTaGGATACGCCCACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: REWYAIKHACYCFLFWKTQNSSS*DTPTGW
Trigger: CCAACCAGTGGGCGTATCCCAAGATGAAGAATTTTG...GGTCTTCCAAAACAAAAAGCAGTAACATGCATGTTTAATTGCATACCATTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp ATCCAATTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGTACTGCTTTTTGTTTTaGAAGACCATGCTGCCAATG +
Preference number: 4 (lower is better)
Translates to: IQFGSWNTLHCNSFRPHEYCFLF*KTMLPM
Trigger: CATTGGCAGCATGGTCTTCCAAAACAAAAAGCAGTA...CTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAATTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp AGAGAATGGTATGCAATTAAACATGCATGTTACTGCTTTTTGTTTTGGAAGACCGCACAATCTTTCTTGTaGCGATCCATAAGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: REWYAIKHACYCFLFWKTAQSFL*RSISLS
Trigger: GCTCAAACTTATGGATCGTCACAAGAAAGATTGTGC...GGTCTTCCAAAACAAAAAGCAGTAACATGCATGTTTAATTGCATACCATTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp TTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTGGATGTGTTCAAAAATaGCTGGAGAGATCAATACAA +
Preference number: 4 (lower is better)
Translates to: LHCNSFRPHETMEIGKPAGCVQK*LERSIQ
Trigger: TTGTATTGATCTCTCCAGTCATTTTTGAACACATCC...AGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp ATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGAAAGAAGGAACTCAAGTaGTGTCCAACTTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: IPLEMSSIFQTSPMRGIRKKELK*CPTLQT
Trigger: GGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTT...TCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp CAAACAATGACCTACCTAATCCATCTAATTTCTCAACTAACTGCCACCATCTCTTCTACTATATCCACCTaGATCCTATTTCACTGTACA +
Preference number: 4 (lower is better)
Translates to: QTMTYLIHLISQLTATISSTIST*ILFHCT
Trigger: TGTACAGTGAAATAGGATGCAGGTGGATATAGTAGA...AGAGATGGTGGCAGTTAGTTGAGAAATTAGATGGATTAGGTAGGTCATTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR CCA 90 bp ATCCAATTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGGTGTTCAAAAATGACTaGAGAGATCAATACAAAGCC +
Preference number: 4 (lower is better)
Translates to: IQFGSWNTLHCNSFRPHEVFKND*RDQYKA
Trigger: GGCTTTGTATTGATCTCTCCAGTCATTTTTGAACAC...CTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAATTGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp TGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTTACTGCTTTTTGTTTTaGAAGACCATGCTGCCAATG +
Preference number: 4 (lower is better)
Translates to: WNTLHCNSFRPHETMEIGYCFLF*KTMLPM
Trigger: CATTGGCAGCATGGTCTTCCAAAACAAAAAGCAGTA...ACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR TCA 90 bp TGCATTAATAGTTCATCTGGAGATTCCCTAGTGGTGGTTAACAAGATTTCATCAGGATGTGTTCAAAAATaGCTGGAGAGATCAATACAA +
Preference number: 4 (lower is better)
Translates to: CINSSSGDSLVVVNKISSGCVQK*LERSIQ
Trigger: TTGTATTGATCTCTCCAGTCATTTTTGAACACATCC...TGATGAAATCTTGTTAACCACCACTAGGGAATCTCCAGATGAACTATTAATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp AAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGAAACATGCATGTTACTaGTTTTTGTTTTGGAAGACC +
Preference number: 4 (lower is better)
Translates to: KSLRRNSSDVQLCKPCPMKHACY*FLFWKT
Trigger: GGTCTTCCAAAACAAAAAGCAGTAACATGCATGTTT...CATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp AGAGAATGGTATGCAATTAAACATGCATGTTACTGCTTTTTGTTTTGGAAGACCTACTGCTTTTTGTTTTaGAAGACCATGCTGCCAATG +
Preference number: 4 (lower is better)
Translates to: REWYAIKHACYCFLFWKTYCFLF*KTMLPM
Trigger: CATTGGCAGCATGGTCTTCCAAAACAAAAAGCAGTA...GGTCTTCCAAAACAAAAAGCAGTAACATGCATGTTTAATTGCATACCATTCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CCA 90 bp TTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGTTCTCTTTCAGGCCTTaGGCAAGTACTAATTTTTAT +
Preference number: 4 (lower is better)
Translates to: FGSWNTLHCNSFRPHETMFSFRP*ASTNFY
Trigger: ATAAAAATTAGTACTTGCCCAAGGCCTGAAAGAGAA...CATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp ATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGTGTGGTGTGTTGTTAAGTaGTTATTAAGATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: IRDVFYFPNITNERHKTVWCVVK*LLRSEL
Trigger: GAGTTCAGATCTTAATAAGCACTTAACAACACACCA...CACTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR GCA 90 bp TGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAACATGCATGTTACTaGTTTTTGTTTTGGAAGACC +
Preference number: 4 (lower is better)
Translates to: WNTLHCNSFRPHETMEIGKHACY*FLFWKT
Trigger: GGTCTTCCAAAACAAAAAGCAGTAACATGCATGTTT...ACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
3UTR CAA 72 bp GAATGGTATGCAATTAAACATGCATGTTACTGCTTTTaGTTTTGGAAGACCATGCTGCCAATGTTTCTATTG +
Preference number: 4 (lower is better)
Translates to: EWYAIKHACYCF*FWKTMLPMFLL
Trigger: CAATAGAAACATTGGCAGCATGGTCTTCCAAAACAAAAAGCAGTAACATGCATGTTTAATTGCATACCATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS GCA 90 bp CCCGGAAGCGCCGCGGCCACCGCCTACGGAAAATGGCTGCCTCCCTaGGGCCGCCGCCGCTCCAGCGGCTCCAGGGTCGAAGCCATAGGG +
Preference number: 5 (lower is better)
Translates to: PGSAAATAYGKWLPP*GRRRSSGSRVEAIG
Trigger: CCCTATGGCTTCGACCCTGGAGCCGCTGGAGCGGCGGCGGCCGCAGGGAGGCAGCCATTTTCCGTAGGCGGTGGCCGCGGCGCTTCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS CCA 90 bp AGAGCCAGAGCGCCGGCCGGAAGTGGAAGTGACGCTTTCCGAGGGTaGCGCAGGCCCGCCCTCTGGCTAAGGCGCCTGAGCCCGGCCTAC +
Preference number: 5 (lower is better)
Translates to: RARAPAGSGSDAFRG*RRPALWLRRLSPAY
Trigger: GTAGGCCGGGCTCAGGCGCCTTAGCCAGAGGGCGGGCCTGCGCCACCCTCGGAAAGCGTCACTTCCACTTCCGGCCGGCGCTCTGGCTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498240.6
CDS GCA 90 bp AGGCACTGCTGCCCGCCAGCACTCGGATTCGCCACAGCCTGTGTCTaGGACAGGCGTGCCCGTGGGCACTGGGCAAGCGGGCAGTGTCCC +
Preference number: 5 (lower is better)
Translates to: RHCCPPALGFATACV*DRRARGHWASGQCP
Trigger: GGGACACTGCCCGCTTGCCCAGTGCCCACGGGCACGCCTGTCGCAGACACAGGCTGTGGCGAATCCGAGTGCTGGCGGGCAGCAGTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS CCA 90 bp GGATTCGCCACAGCCTGTGTCTGCGACAGGCGTGCCCGTGGGCACTaGGCAAGCGGGCAGTGTCCCAGCGAGCTTCAGCCGCGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: GFATACVCDRRARGH*ASGQCPSELQPRLW
Trigger: CCAGAGGCGCGGCTGAAGCTCGCTGGGACACTGCCCGCTTGCCCAGTGCCCACGGGCACGCCTGTCGCAGACACAGGCTGTGGCGAATCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS CCA 90 bp AGCACTCGGATTCGCCACAGCCTGTGTCTGCGACAGGCGTGCCCGTaGGCACTGGGCAAGCGGGCAGTGTCCCAGCGAGCTTCAGCCGCG +
Preference number: 5 (lower is better)
Translates to: STRIRHSLCLRQACP*ALGKRAVSQRASAA
Trigger: CGCGGCTGAAGCTCGCTGGGACACTGCCCGCTTGCCCAGTGCCCACGGGCACGCCTGTCGCAGACACAGGCTGTGGCGAATCCGAGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS TCA 90 bp TTTCTGAGGCTCAAACGCAAGCCACCGCCCGAAAGGCCGCCGATCTaGGGAGCGCAACCGCCAGCCCACCGCTGGCCTACCGCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: FLRLKRKPPPERPPI*GAQPPAHRWPTAAL
Trigger: CAGGGCTGCGGTAGGCCAGCGGTGGGCTGGCGGTTGCGCTCCTCAGATCGGCGGCCTTTCGGGCGGTGGCTTGCGTTTGAGCCTCAGAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000498240.6
ENST00000571101.5
ENST00000574298.6
ENST00000575234.1
ENST00000669516.2
CDS GCA 90 bp ACACGGAAATGCCGGCGGAGGCGGGAAAGAGTCTGCGGGCGCAGCTaGAGGCACTGCTGCCCGCCAGCACTCGGATTCGCCACAGCCTGT +
Preference number: 5 (lower is better)
Translates to: TRKCRRRRERVCGRS*RHCCPPALGFATAC
Trigger: ACAGGCTGTGGCGAATCCGAGTGCTGGCGGGCAGCAGTGCCTGCAGCTGCGCCCGCAGACTCTTTCCCGCCTCCGCCGGCATTTCCGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS TCA 90 bp AGCACTCGGCCAGCTTGGCTTCCGTGGAGGCCGCTCCTCGCTTTCTaGGGCTCAAACGCAAGCCACCGCCCGAAAGGCCGCCGATCTGAG +
Preference number: 5 (lower is better)
Translates to: STRPAWLPWRPLLAF*GSNASHRPKGRRSE
Trigger: CTCAGATCGGCGGCCTTTCGGGCGGTGGCTTGCGTTTGAGCCTCAGAAAGCGAGGAGCGGCCTCCACGGAAGCCAAGCTGGCCGAGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS TCA 90 bp CAACCTCGGCCAGCTTGGCTTCCGTGGAGGCCGCTCCTCGCTTTCTaGGGCTCAAACGCAAGCCACCGCCCGAAAGGCCGCCGATCTGAG +
Preference number: 5 (lower is better)
Translates to: QPRPAWLPWRPLLAF*GSNASHRPKGRRSE
Trigger: CTCAGATCGGCGGCCTTTCGGGCGGTGGCTTGCGTTTGAGCCTCAGAAAGCGAGGAGCGGCCTCCACGGAAGCCAAGCTGGCCGAGGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571101.5
ENST00000574298.6
CDS GCA 90 bp CGGGCAGTGTCCCAGCGAGCTTCAGCCGCGCCTCTGGGATACAGCTaGGAAAAGCGGGGAGAGAATGGTTTCTCGTGCCCGACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: RAVSQRASAAPLGYS*EKRGENGFSCPTVA
Trigger: GGCCACCGTCGGGCACGAGAAACCATTCTCTCCCCGCTTTTCGCAGCTGTATCCCAGAGGCGCGGCTGAAGCTCGCTGGGACACTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS TCA 90 bp TTACCTCGGCCAGCTTGGCTTCCGTGGAGGCCGCTCCTCGCTTTCTaGGGCTCAAACGCAAGCCACCGCCCGAAAGGCCGCCGATCTGAG +
Preference number: 5 (lower is better)
Translates to: LPRPAWLPWRPLLAF*GSNASHRPKGRRSE
Trigger: CTCAGATCGGCGGCCTTTCGGGCGGTGGCTTGCGTTTGAGCCTCAGAAAGCGAGGAGCGGCCTCCACGGAAGCCAAGCTGGCCGAGGTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS CCA 90 bp CACTGGGCAAGCGGGCAGTGTCCCAGCGAGCTTCAGCCGCGCCTCTaGGATACAGCTGCGAAAAGCGGGGAGAGAATGGTTTCTCGTGCC +
Preference number: 5 (lower is better)
Translates to: HWASGQCPSELQPRL*DTAAKSGERMVSRA
Trigger: GGCACGAGAAACCATTCTCTCCCCGCTTTTCGCAGCTGTATCCCAGAGGCGCGGCTGAAGCTCGCTGGGACACTGCCCGCTTGCCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS TCA 90 bp TTTGCATCAGTAGAAGCTGCTAGCCCTGAGGCTCAACCGACCGCATaGCATCGGCCGGACACGGAAATGCCGGCGGAGGCGGGAAAGAGT +
Preference number: 5 (lower is better)
Translates to: FASVEAASPEAQPTA*HRPDTEMPAEAGKS
Trigger: ACTCTTTCCCGCCTCCGCCGGCATTTCCGTGTCCGGCCGATGTCATGCGGTCGGTTGAGCCTCAGGGCTAGCAGCTTCTACTGATGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS CCA 90 bp GACCCGAGGTCAGCAGATGTGTCGCCACCCACCAAGTTCATACCCTaGCTCCCAACTTGTCAGCAGAGCCAAGGAACAAGCATTAAGGGA +
Preference number: 5 (lower is better)
Translates to: DPRSADVSPPTKFIP*LPTCQQSQGTSIKG
Trigger: TCCCTTAATGCTTGTTCCTTGGCTCTGCTGACAAGTTGGGAGCCAGGGTATGAACTTGGTGGGTGGCGACACATCTGCTGACCTCGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573828.1
CDS GCA 90 bp TTCTGCCCAGGATGCCACCGGTATTCAAAGAAGTGGCCAGCTCCTTaGTGCCCACCCCGGTTCCAGAAGCAAAGAGACACTTCCTATGTT +
Preference number: 5 (lower is better)
Translates to: FCPGCHRYSKKWPAP*CPPRFQKQRDTSYV
Trigger: AACATAGGAAGTGTCTCTTTGCTTCTGGAACCGGGGTGGGCAGCAAGGAGCTGGCCACTTCTTTGAATACCGGTGGCATCCTGGGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS-3UTR CAA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTAGACCGGAGCTCTCTCTaGCAGGCCCCTTGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: RPHETMEIGKPATVKRMVDRSSL*QAPWSP
Trigger: GGGAGACCAAGGGGCCTGCAAGAGAGAGCTCCGGTC...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS GCA 90 bp CATGGACTGCAACCTCCAGATGATTCTGACACCAAACATAGGTCCTaGCCTGTATTCTTCCCAGCAGACCCGAGGTCAGCAGATGTGTCG +
Preference number: 5 (lower is better)
Translates to: HGLQPPDDSDTKHRS*PVFFPADPRSADVS
Trigger: CGACACATCTGCTGACCTCGGGTCTGCTGGGAAGAATACAGGGCAGGACCTATGTTTGGTGTCAGAATCATCTGGAGGTTGCAGTCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573828.1
CDS GCA 90 bp TGCCCAGGATGCCACCGGTATTCAAAGAAGTGGCCAGCTCCTTGCTaGCCACCCCGGTTCCAGAAGCAAAGAGACACTTCCTATGTTTTT +
Preference number: 5 (lower is better)
Translates to: CPGCHRYSKKWPAPC*PPRFQKQRDTSYVF
Trigger: AAAAACATAGGAAGTGTCTCTTTGCTTCTGGAACCGGGGTGGGCAGCAAGGAGCTGGCCACTTCTTTGAATACCGGTGGCATCCTGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS-3UTR CAA 90 bp GGTTCAAATGATTCTCCCTCCTCAGCCTCGAGGATAGCCGGGATTACAGGCACCCACCCCATTCCATGTTaGACCAGATTCCCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: GSNDSPSSASRIAGITGTHPIPC*TRFPLQ
Trigger: TTGCAGAGGGAATCTGGTCAAACATGGAATGGGGTG...GGTGCCTGTAATCCCGGCTATCCTCGAGGCTGAGGAGGGAGAATCATTTGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR CAA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCGGATACGCCCACTGGTaGGGACTCTGTTGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLGYAHW*GLCWLQ
Trigger: CTGAAGCCAACAGAGTCCCAACCAGTGGGCGTATCC...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR CAA 90 bp AGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGACAAAAGAAAGAGCAACCTCGGCCAGCTaGGCTTCCGTGGAGGCCGCT +
Preference number: 5 (lower is better)
Translates to: RNSSDVQLCKPCPMTKERATSAS*ASVEAA
Trigger: AGCGGCCTCCACGGAAGCCAAGCTGGCCGAGGTTGC...TCTTTCTTTTGTCATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574298.6
CDS-3UTR CAA 90 bp CATCTAATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCAAGCACTCGGCCAGCTaGGCTTCCGTGGAGGCCGCT +
Preference number: 5 (lower is better)
Translates to: HLIYIPWLQIPTRFPHDSKHSAS*ASVEAA
Trigger: AGCGGCCTCCACGGAAGCCAAGCTGGCCGAGTGCTT...GGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATATTAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR CAA 90 bp AGATTTTCCGGCACTATCCTTAAACTCCGGGGATACTTGAACCCATGGCTCTTCGCTTCAGCCCGAAACTaGAGGCCTCTGCTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: RFSGTILKLRGYLNPWLFASARN*RPLLFL
Trigger: GAGAAACAGCAGAGGCCTCAAGTTTCGGGCTGAAGC...GAAGAGCCATGGGTTCAAGTATCCCCGGAGTTTAAGGATAGTGCCGGAAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498240.6
CDS-3UTR CAA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCGCTTCAGCCCGAAACTaGAGGCCTCTGCTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLASARN*RPLLFL
Trigger: GAGAAACAGCAGAGGCCTCAAGTTTCGGGCTGAAGC...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR CAA 90 bp GTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCTTCACAGGTGGAGTTGGATACGCCCACTGGTaGGGACTCTGTTGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: VNVFRMRTLDKLLFTGGVGYAHW*GLCWLQ
Trigger: CTGAAGCCAACAGAGTCCCAACCAGTGGGCGTATCC...AACTCCACCTGTGAAGAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498240.6
CDS-3UTR CAA 90 bp CAAACAATGACCTACCTAATCCATCTAATTTCTCAACTAACTGCCACCATCTCTGACCGGAGCTCTCTCTaGCAGGCCCCTTGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: QTMTYLIHLISQLTATISDRSSL*QAPWSP
Trigger: GGGAGACCAAGGGGCCTGCAAGAGAGAGCTCCGGTC...AGAGATGGTGGCAGTTAGTTGAGAAATTAGATGGATTAGGTAGGTCATTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612186.1
CDS-3UTR CAA 90 bp CCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGGACCGGAGCTCTCTCTaGCAGGCCCCTTGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: PLEMSSIFQTSPMRGIRQDRSSL*QAPWSP
Trigger: GGGAGACCAAGGGGCCTGCAAGAGAGAGCTCCGGTC...CTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR CAA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTACTGGTTGGGACTCTGTaGGCTTCAGCCCGAAACTTG +
Preference number: 5 (lower is better)
Translates to: RPHETMEIGKPATVKRMVLVGTL*ASARNL
Trigger: CAAGTTTCGGGCTGAAGCCAACAGAGTCCCAACCAG...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCTGGTTGGGACTCTGTaGGCTTCAGCCCGAAACTTG +
Preference number: 5 (lower is better)
Translates to: CQAPFGECLQNEDTGQASLVGTL*ASARNL
Trigger: CAAGTTTCGGGCTGAAGCCAACAGAGTCCCAACCAG...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR CAA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTAAAACTCCGGGGATACTaGAACCCATGGCTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: RPHETMEIGKPATVKRMVKLRGY*NPWLFP
Trigger: GGGGAAGAGCCATGGGTTCAAGTATCCCCGGAGTTT...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTAAACTCCGGGGATACTaGAACCCATGGCTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: CQAPFGECLQNEDTGQASKLRGY*NPWLFP
Trigger: GGGGAAGAGCCATGGGTTCAAGTATCCCCGGAGTTT...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR CAA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCCCTGCTGAGCTGTTCTaGCAGACCCTCGTATGTATT +
Preference number: 5 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLPAELF*QTLVCI
Trigger: AATACATACGAGGGTCTGCAAGAACAGCTCAGCAGG...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR CAA 90 bp ATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCATTAGAGATGTCAAACTCCGGGGATACTaGAACCCATGGCTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: IPWLQIPTRFPHDSIRDVKLRGY*NPWLFP
Trigger: GGGGAAGAGCCATGGGTTCAAGTATCCCCGGAGTTT...GACATCTCTAATGGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS GCA 90 bp GAGGGTCCAAGTACGCAGCCACTTTCAGATCTACCATCATCATTCTaGTCTAGGAAGTTCTGCTCCTGTGTTAAGACACCCAATTGGTAC +
Preference number: 5 (lower is better)
Translates to: EGPSTQPLSDLPSSF*SRKFCSCVKTPNWY
Trigger: GTACCAATTGGGTGTCTTAACACAGGAGCAGAACTTCCTAGAGCAGAATGATGATGGTAGATCTGAAAGTGGCTGCGTACTTGGACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000575234.1
ENST00000612186.1
ENST00000669516.2
CDS-3UTR CAA 90 bp CATCTAATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCGGATACGCCCACTGGTaGGGACTCTGTTGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: HLIYIPWLQIPTRFPHDSGYAHW*GLCWLQ
Trigger: CTGAAGCCAACAGAGTCCCAACCAGTGGGCGTATCC...GGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATATTAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS GCA 90 bp TTCTCTAGGCCTACTCCCACTTTCATCCACAGTTGGCATTTCTACTaGTGCCTGGAAGGACATCATAGTTGCTATCAAGGCTGGTTTTAC +
Preference number: 5 (lower is better)
Translates to: FSRPTPTFIHSWHFY*CLEGHHSCYQGWFY
Trigger: GTAAAACCAGCCTTGATAGCAACTATGATGTCCTTCCAGGCAGCAGTAGAAATGCCAACTGTGGATGAAAGTGGGAGTAGGCCTAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575812.1
CDS CCA 90 bp GGCCTACTCCCACTTTCATCCACAGTTGGCATTTCTACTGCTGCCTaGAAGGACATCATAGTTGCTATCAAGGCTGGTTTTACAAATCCA +
Preference number: 5 (lower is better)
Translates to: GLLPLSSTVGISTAA*KDIIVAIKAGFTNP
Trigger: TGGATTTGTAAAACCAGCCTTGATAGCAACTATGATGTCCTTCCAGGCAGCAGTAGAAATGCCAACTGTGGATGAAAGTGGGAGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575812.1
CDS-3UTR CAA 90 bp CCCATGATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCCTGGTTGGGACTCTGTaGGCTTCAGCCCGAAACTTG +
Preference number: 5 (lower is better)
Translates to: PMIPLEMSSIFQTSPMRGLVGTL*ASARNL
Trigger: CAAGTTTCGGGCTGAAGCCAACAGAGTCCCAACCAG...GCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp AAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGGGATACGCCCACTGGTaGGGACTCTGTTGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: KSLRRNSSDVQLCKPCPMGYAHW*GLCWLQ
Trigger: CTGAAGCCAACAGAGTCCCAACCAGTGGGCGTATCC...CATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCCAAAATTCTTCATCTaGGGATACGCCCACTGGTTG +
Preference number: 5 (lower is better)
Translates to: CQAPFGECLQNEDTGQASPKFFI*GYAHWL
Trigger: CAACCAGTGGGCGTATCCCAAGATGAAGAATTTTGG...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS-3UTR CAA 90 bp GCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTCGAGATCACTTTAGGTTaGGGGAGCACAAACAATGCT +
Preference number: 5 (lower is better)
Translates to: AKLHLVNVFRMRTLDKLLEITLG*GSTNNA
Trigger: AGCATTGTTTGTGCTCCCCAAACCTAAAGTGATCTC...GAGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000617839.1
ENST00000669516.2
CDS GCA 90 bp TCTAGGCCTACTCCCACTTTCATCCACAGTTGGCATTTCTACTGCTaGCTGGAAGGACATCATAGTTGCTATCAAGGCTGGTTTTACAAA +
Preference number: 5 (lower is better)
Translates to: SRPTPTFIHSWHFYC*LEGHHSCYQGWFYK
Trigger: TTTGTAAAACCAGCCTTGATAGCAACTATGATGTCCTTCCAGGCAGCAGTAGAAATGCCAACTGTGGATGAAAGTGGGAGTAGGCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575812.1
CDS-3UTR CAA 90 bp AGACAGTGCATTAATAGTTCATCTGGAGATTCCCTAGTGGTGGTTAACAAGATTGCTTCAGCCCGAAACTaGAGGCCTCTGCTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: RQCINSSSGDSLVVVNKIASARN*RPLLFL
Trigger: GAGAAACAGCAGAGGCCTCAAGTTTCGGGCTGAAGC...AATCTTGTTAACCACCACTAGGGAATCTCCAGATGAACTATTAATGCACTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp CCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGGCTTCAGCCCGAAACTaGAGGCCTCTGCTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: PLEMSSIFQTSPMRGIRQASARN*RPLLFL
Trigger: GAGAAACAGCAGAGGCCTCAAGTTTCGGGCTGAAGC...CTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTAGAGATCACTTTAGGTTaGGGGAGCACAAACAATGCT +
Preference number: 5 (lower is better)
Translates to: RPHETMEIGKPATVKRMVEITLG*GSTNNA
Trigger: AGCATTGTTTGTGCTCCCCAAACCTAAAGTGATCTC...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp AGACAGTGCATTAATAGTTCATCTGGAGATTCCCTAGTGGTGGTTAACAAGATTAAACTCCGGGGATACTaGAACCCATGGCTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: RQCINSSSGDSLVVVNKIKLRGY*NPWLFP
Trigger: GGGGAAGAGCCATGGGTTCAAGTATCCCCGGAGTTT...AATCTTGTTAACCACCACTAGGGAATCTCCAGATGAACTATTAATGCACTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp CGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAAGAGAATGGTAAGTGCCAAGCTCCATTaGGTGAATGTCTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: RPHETMEIGKPATVKRMVSAKLH*VNVFRM
Trigger: CATTCTGAAGACATTCACCAAATGGAGCTTGGCACT...TACCATTCTCTTCACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS GCA 90 bp ATCCACAGTTGGCATTTCTACTGCTGCCTGGAAGGACATCATAGTTaGTATCAAGGCTGGTTTTACAAATCCACAGAGCAGGGTATTCAA +
Preference number: 5 (lower is better)
Translates to: IHSWHFYCCLEGHHS*YQGWFYKSTEQGIQ
Trigger: TTGAATACCCTGCTCTGTGGATTTGTAAAACCAGCCTTGATAGCAACTATGATGTCCTTCCAGGCAGCAGTAGAAATGCCAACTGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575812.1
CDS-3UTR CAA 90 bp TGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTCTGGTTGGGACTCTGTaGGCTTCAGCCCGAAACTTG +
Preference number: 5 (lower is better)
Translates to: WNTLHCNSFRPHETMEIGLVGTL*ASARNL
Trigger: CAAGTTTCGGGCTGAAGCCAACAGAGTCCCAACCAG...ACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp TTGCCGAAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTAACCCCATTCCATGTTaGACCAGATTCCCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: LPKSLRRNSSDVQLCKPCNPIPC*TRFPLQ
Trigger: TTGCAGAGGGAATCTGGTCAAACATGGAATGGGGTT...ACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTTCGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498240.6
ENST00000669516.2
CDS-3UTR CAA 90 bp TTGCCGAAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAAAATTCTTCATCTaGGGATACGCCCACTGGTTG +
Preference number: 5 (lower is better)
Translates to: LPKSLRRNSSDVQLCKPCPKFFI*GYAHWL
Trigger: CAACCAGTGGGCGTATCCCAAGATGAAGAATTTTGG...ACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTTCGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp TTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGCCTGCTGAGCTGTTCTaGCAGACCCTCGTATGTATT +
Preference number: 5 (lower is better)
Translates to: FGSWNTLHCNSFRPHETMPAELF*QTLVCI
Trigger: AATACATACGAGGGTCTGCAAGAACAGCTCAGCAGG...CATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp TTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTCCTGCTGAGCTGTTCTaGCAGACCCTCGTATGTATT +
Preference number: 5 (lower is better)
Translates to: LHCNSFRPHETMEIGKPAPAELF*QTLVCI
Trigger: AATACATACGAGGGTCTGCAAGAACAGCTCAGCAGG...AGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp ATATATATTCCATGGCTACAAATTCCAACCCGTTTCCCCCATGATTCCATTAGACCTGCTGAGCTGTTCTaGCAGACCCTCGTATGTATT +
Preference number: 5 (lower is better)
Translates to: IYIPWLQIPTRFPHDSIRPAELF*QTLVCI
Trigger: AATACATACGAGGGTCTGCAAGAACAGCTCAGCAGG...TCTAATGGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATGGAATATATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp TGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGAGTGCCAAGCTCCATTaGGTGAATGTCTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: CNSFRPHETMEIGKPATVSAKLH*VNVFRM
Trigger: CATTCTGAAGACATTCACCAAATGGAGCTTGGCACT...CACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp TGCCAAGCTCCATTTGGTGAATGTCTTCAGAATGAGGACACTGGACAAGCTTCTTTACTGCTTTTTGTTTaGGAAGACCATGCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: CQAPFGECLQNEDTGQASLLLFV*EDHAAN
Trigger: ATTGGCAGCATGGTCTTCCAAAACAAAAAGCAGTAA...AGAAGCTTGTCCAGTGTCCTCATTCTGAAGACATTCACCAAATGGAGCTTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp CCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGCCAAAATTCTTCATCTaGGGATACGCCCACTGGTTG +
Preference number: 5 (lower is better)
Translates to: PLEMSSIFQTSPMRGIRQPKFFI*GYAHWL
Trigger: CAACCAGTGGGCGTATCCCAAGATGAAGAATTTTGG...CTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp TTGCCGAAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTAGTGCCAAGCTCCATTaGGTGAATGTCTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: LPKSLRRNSSDVQLCKPCSAKLH*VNVFRM
Trigger: CATTCTGAAGACATTCACCAAATGGAGCTTGGCACT...ACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTTCGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp TGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAAGCCTGCTACTGTGGCATGTTACTGCTTTTaGTTTTGGAAGACCATGCTG +
Preference number: 5 (lower is better)
Translates to: CNSFRPHETMEIGKPATVACYCF*FWKTML
Trigger: CAGCATGGTCTTCCAAAACAAAAAGCAGTAACATGC...CACAGTAGCAGGCTTACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS CCA 90 bp CAAATGGACAAAATGAGGTCAAGGACTGGTAACTTAACAGTGAACTaGTCCACTAATCCCAGACTGTTTCAGGATGACCAAAGACATTTT +
Preference number: 5 (lower is better)
Translates to: QMDKMRSRTGNLTVN*STNPRLFQDDQRHF
Trigger: AAAATGTCTTTGGTCATCCTGAAACAGTCTGGGATTAGTGGACCAGTTCACTGTTAAGTTACCAGTCCTTGACCTCATTTTGTCCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575253.1
CDS-3UTR CAA 90 bp ATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGTGCCAAAATTCTTCATCTaGGGATACGCCCACTGGTTG +
Preference number: 5 (lower is better)
Translates to: IRDVFYFPNITNERHKTVPKFFI*GYAHWL
Trigger: CAACCAGTGGGCGTATCCCAAGATGAAGAATTTTGG...CACTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp AAAAGTTTAAGAAGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGGAGATCACTTTAGGTTaGGGGAGCACAAACAATGCT +
Preference number: 5 (lower is better)
Translates to: KSLRRNSSDVQLCKPCPMEITLG*GSTNNA
Trigger: AGCATTGTTTGTGCTCCCCAAACCTAAAGTGATCTC...CATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCTTCTTAAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp AGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGACAAAAGAAAGAGCATGTTACTGCTTTTaGTTTTGGAAGACCATGCTG +
Preference number: 5 (lower is better)
Translates to: RNSSDVQLCKPCPMTKERACYCF*FWKTML
Trigger: CAGCATGGTCTTCCAAAACAAAAAGCAGTAACATGC...TCTTTCTTTTGTCATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp CCCATGATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCAGGATCCAAGAGAAGTaGCCGAAAAGTTTAAGAAGG +
Preference number: 5 (lower is better)
Translates to: PMIPLEMSSIFQTSPMRGRIQEK*PKSLRR
Trigger: CCTTCTTAAACTTTTCGGCAACTTCTCTTGGATCCT...GCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATCATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS TCA 90 bp TCTGCTCCTGTGTTAAGACACCCAATTGGTACCACGTTTAACAAATaGGATCCTGTCTGGTCTTGTACAAAAGCAATAAAAGGATCTTCT +
Preference number: 5 (lower is better)
Translates to: SAPVLRHPIGTTFNK*DPVWSCTKAIKGSS
Trigger: AGAAGATCCTTTTATTGCTTTTGTACAAGACCAGACAGGATCTCATTTGTTAAACGTGGTACCAATTGGGTGTCTTAACACAGGAGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000575234.1
ENST00000669516.2
CDS-3UTR CAA 90 bp TGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTGAGATCACTTTAGGTTaGGGGAGCACAAACAATGCT +
Preference number: 5 (lower is better)
Translates to: WNTLHCNSFRPHETMEIGEITLG*GSTNNA
Trigger: AGCATTGTTTGTGCTCCCCAAACCTAAAGTGATCTC...ACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp AGGAACTCAAGTGATGTCCAACTTTGCAAACCGTGTCCAATGACAAAAGAAAGAGCTGCAGAGCAAGTCTaGATTATTTTCTGTGAAATG +
Preference number: 5 (lower is better)
Translates to: RNSSDVQLCKPCPMTKERAAEQV*IIFCEM
Trigger: CATTTCACAGAAAATAATCAAGACTTGCTCTGCAGC...TCTTTCTTTTGTCATTGGACACGGTTTGCAAAGTTGGACATCACTTGAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp CCCATGATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCTTACTGCTTTTTGTTTaGGAAGACCATGCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: PMIPLEMSSIFQTSPMRGLLLFV*EDHAAN
Trigger: ATTGGCAGCATGGTCTTCCAAAACAAAAAGCAGTAA...GCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATCATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS GCA 90 bp AAACCAAACAATGACCTACCTAATCCATCTAATTTCTCAACTAACTaGCACCATCTCTACTATATCCACCTGCATCCTATTTCACTGTAC +
Preference number: 5 (lower is better)
Translates to: KPNNDLPNPSNFSTN*HHLYYIHLHPISLY
Trigger: GTACAGTGAAATAGGATGCAGGTGGATATAGTAGAGATGGTGGCAGTTAGTTGAGAAATTAGATGGATTAGGTAGGTCATTGTTTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575234.1
ENST00000612186.1
CDS-3UTR CAA 90 bp GGAGAGATCAATACAAAGCCAACAATGTTTACTTCTGTGACCACAGAAGACTACCTGCCAATGTTTCTATaGGATGTGTTCAAAAATGAC +
Preference number: 5 (lower is better)
Translates to: GEINTKPTMFTSVTTEDYLPMFL*DVFKND
Trigger: GTCATTTTTGAACACATCCAATAGAAACATTGGCAG...GTAGTCTTCTGTGGTCACAGAAGTAAACATTGTTGGCTTTGTATTGATCTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp GGAGAGATCAATACAAAGCCAACAATGTTTACTTCTGTGACCACAGAAGACTACGAAAGAAAATCCAATTaGGTTCCTGGAACACTTTAC +
Preference number: 5 (lower is better)
Translates to: GEINTKPTMFTSVTTEDYERKSN*VPGTLY
Trigger: GTAAAGTGTTCCAGGAACCAAATTGGATTTTCTTTC...GTAGTCTTCTGTGGTCACAGAAGTAAACATTGTTGGCTTTGTATTGATCTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp TGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGACTATGGAAATTGGTAGGATCCAAGAGAAGTaGCCGAAAAGTTTAAGAAGG +
Preference number: 5 (lower is better)
Translates to: WNTLHCNSFRPHETMEIGRIQEK*PKSLRR
Trigger: CCTTCTTAAACTTTTCGGCAACTTCTCTTGGATCCT...ACCAATTTCCATAGTCTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp GATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGAGGATCCAAGAGAAGTaGCCGAAAAGTTTAAGAAGG +
Preference number: 5 (lower is better)
Translates to: DSIRDVFYFPNITNERHKRIQEK*PKSLRR
Trigger: CCTTCTTAAACTTTTCGGCAACTTCTCTTGGATCCT...CTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp GATTCCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGGCTGCAGAGCAAGTCTaGATTATTTTCTGTGAAATG +
Preference number: 5 (lower is better)
Translates to: DSIRDVFYFPNITNERHKAAEQV*IIFCEM
Trigger: CATTTCACAGAAAATAATCAAGACTTGCTCTGCAGC...CTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp ATCCAATTTGGTTCCTGGAACACTTTACATTGTAATTCATTTCGGCCTCATGAGCTGCCAATGTTTCTATaGGATGTGTTCAAAAATGAC +
Preference number: 5 (lower is better)
Translates to: IQFGSWNTLHCNSFRPHELPMFL*DVFKND
Trigger: GTCATTTTTGAACACATCCAATAGAAACATTGGCAG...CTCATGAGGCCGAAATGAATTACAATGTAAAGTGTTCCAGGAACCAAATTGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp CCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGCTGCCAATGTTTCTATaGGATGTGTTCAAAAATGAC +
Preference number: 5 (lower is better)
Translates to: PLEMSSIFQTSPMRGIRQLPMFL*DVFKND
Trigger: GTCATTTTTGAACACATCCAATAGAAACATTGGCAG...CTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp CCATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGGAAAGAAAATCCAATTaGGTTCCTGGAACACTTTAC +
Preference number: 5 (lower is better)
Translates to: PLEMSSIFQTSPMRGIRQERKSN*VPGTLY
Trigger: GTAAAGTGTTCCAGGAACCAAATTGGATTTTCTTTC...CTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp AGAGAATGGTATGCAATTAAACATGCATGTTACTGCTTTTTGTTTTGGAAGACCTTACTGCTTTTTGTTTaGGAAGACCATGCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: REWYAIKHACYCFLFWKTLLLFV*EDHAAN
Trigger: ATTGGCAGCATGGTCTTCCAAAACAAAAAGCAGTAA...GGTCTTCCAAAACAAAAAGCAGTAACATGCATGTTTAATTGCATACCATTCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS-3UTR CAA 90 bp ATTAGAGATGTCTTCTATTTTCCAAACATCACCAATGAGAGGCATAAGACAGTGGAAAGAAAATCCAATTaGGTTCCTGGAACACTTTAC +
Preference number: 5 (lower is better)
Translates to: IRDVFYFPNITNERHKTVERKSN*VPGTLY
Trigger: GTAAAGTGTTCCAGGAACCAAATTGGATTTTCTTTC...CACTGTCTTATGCCTCTCATTGGTGATGTTTGGAAAATAGAAGACATCTCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000498240.6
ENST00000574298.6
ENST00000669516.2
CDS CCA 72 bp GCGCCGGCCGGAAGTGGAAGTGACGCTTTCCGAGGGTaGCGCAGGCCCGCCCTCTGGCTAAGGCGCCTGAGC +
Preference number: 6 (lower is better)
Translates to: APAGSGSDAFRG*RRPALWLRRLS
Trigger: GCTCAGGCGCCTTAGCCAGAGGGCGGGCCTGCGCCACCCTCGGAAAGCGTCACTTCCACTTCCGGCCGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498240.6
CDS TCA 72 bp CAGGTACAGAGCCAGAGCGCCGGCCGGAAGTGGAAGTaGCGCTTTCCGAGGGTGGCGCAGGCCCGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: QVQSQSAGRKWK*RFPRVAQARPL
Trigger: CAGAGGGCGGGCCTGCGCCACCCTCGGAAAGCGTCACTTCCACTTCCGGCCGGCGCTCTGGCTCTGTACCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498240.6
CDS TCA 72 bp CTCAAACGCAAGCCACCGCCCGAAAGGCCGCCGATCTaGGGAGCGCAACCGCCAGCCCACCGCTGGCCTACC +
Preference number: 6 (lower is better)
Translates to: LKRKPPPERPPI*GAQPPAHRWPT
Trigger: GGTAGGCCAGCGGTGGGCTGGCGGTTGCGCTCCTCAGATCGGCGGCCTTTCGGGCGGTGGCTTGCGTTTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000498240.6
ENST00000571101.5
ENST00000574298.6
ENST00000575234.1
ENST00000669516.2
CDS CCA 72 bp ACAGCCTGTGTCTGCGACAGGCGTGCCCGTGGGCACTaGGCAAGCGGGCAGTGTCCCAGCGAGCTTCAGCCG +
Preference number: 6 (lower is better)
Translates to: TACVCDRRARGH*ASGQCPSELQP
Trigger: CGGCTGAAGCTCGCTGGGACACTGCCCGCTTGCCCAGTGCCCACGGGCACGCCTGTCGCAGACACAGGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS GCA 72 bp CGGGAAAGAGTCTGCGGGCGCAGCTGCAGGCACTGCTaGCCGCCAGCACTCGGATTCGCCACAGCCTGTGTC +
Preference number: 6 (lower is better)
Translates to: RERVCGRSCRHC*PPALGFATACV
Trigger: GACACAGGCTGTGGCGAATCCGAGTGCTGGCGGGCAGCAGTGCCTGCAGCTGCGCCCGCAGACTCTTTCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS GCA 72 bp CTCAACCGACCGCATGACATCGGCCGGACACGGAAATaGCGGCGGAGGCGGGAAAGAGTCTGCGGGCGCAGC +
Preference number: 6 (lower is better)
Translates to: LNRPHDIGRTRK*RRRRERVCGRS
Trigger: GCTGCGCCCGCAGACTCTTTCCCGCCTCCGCCGGCATTTCCGTGTCCGGCCGATGTCATGCGGTCGGTTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS CCA 72 bp ATTCGCCACAGCCTGTGTCTGCGACAGGCGTGCCCGTaGGCACTGGGCAAGCGGGCAGTGTCCCAGCGAGCT +
Preference number: 6 (lower is better)
Translates to: IRHSLCLRQACP*ALGKRAVSQRA
Trigger: AGCTCGCTGGGACACTGCCCGCTTGCCCAGTGCCCACGGGCACGCCTGTCGCAGACACAGGCTGTGGCGAAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS TCA 72 bp CCAGCTTGGCTTCCGTGGAGGCCGCTCCTCGCTTTCTaGGGCTCAAACGCAAGCCACCGCCCGAAAGGCCGC +
Preference number: 6 (lower is better)
Translates to: PAWLPWRPLLAF*GSNASHRPKGR
Trigger: GCGGCCTTTCGGGCGGTGGCTTGCGTTTGAGCCTCAGAAAGCGAGGAGCGGCCTCCACGGAAGCCAAGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000498240.6
ENST00000571101.5
ENST00000574298.6
ENST00000575234.1
ENST00000669516.2
CDS TCA 72 bp GTAGAAGCTGCTAGCCCTGAGGCTCAACCGACCGCATaGCATCGGCCGGACACGGAAATGCCGGCGGAGGCG +
Preference number: 6 (lower is better)
Translates to: VEAASPEAQPTA*HRPDTEMPAEA
Trigger: CGCCTCCGCCGGCATTTCCGTGTCCGGCCGATGTCATGCGGTCGGTTGAGCCTCAGGGCTAGCAGCTTCTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS GCA 72 bp TCCCAGCGAGCTTCAGCCGCGCCTCTGGGATACAGCTaGGAAAAGCGGGGAGAGAATGGTTTCTCGTGCCCG +
Preference number: 6 (lower is better)
Translates to: SQRASAAPLGYS*EKRGENGFSCP
Trigger: CGGGCACGAGAAACCATTCTCTCCCCGCTTTTCGCAGCTGTATCCCAGAGGCGCGGCTGAAGCTCGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS CCA 72 bp AGCGGGCAGTGTCCCAGCGAGCTTCAGCCGCGCCTCTaGGATACAGCTGCGAAAAGCGGGGAGAGAATGGTT +
Preference number: 6 (lower is better)
Translates to: SGQCPSELQPRL*DTAAKSGERMV
Trigger: AACCATTCTCTCCCCGCTTTTCGCAGCTGTATCCCAGAGGCGCGGCTGAAGCTCGCTGGGACACTGCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS TCA 72 bp CTTGCAGGCCCCTTGGTCTCCCACAAAGCCCTGATCTaGGGGTCCAAGTACGCAGCCACTTTCAGATCTACC +
Preference number: 6 (lower is better)
Translates to: LAGPLVSHKALI*GSKYAATFRST
Trigger: GGTAGATCTGAAAGTGGCTGCGTACTTGGACCCTCAGATCAGGGCTTTGTGGGAGACCAAGGGGCCTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000575234.1
ENST00000612186.1
ENST00000669516.2
CDS GCA 72 bp TGCCACCGGTATTCAAAGAAGTGGCCAGCTCCTTGCTaGCCACCCCGGTTCCAGAAGCAAAGAGACACTTCC +
Preference number: 6 (lower is better)
Translates to: CHRYSKKWPAPC*PPRFQKQRDTS
Trigger: GGAAGTGTCTCTTTGCTTCTGGAACCGGGGTGGGCAGCAAGGAGCTGGCCACTTCTTTGAATACCGGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS CAA 72 bp AGGATGCCACCGGTATTCAAAGAAGTGGCCAGCTCCTaGCTGCCCACCCCGGTTCCAGAAGCAAAGAGACAC +
Preference number: 6 (lower is better)
Translates to: RMPPVFKEVASS*LPTPVPEAKRH
Trigger: GTGTCTCTTTGCTTCTGGAACCGGGGTGGGCAGCAAGGAGCTGGCCACTTCTTTGAATACCGGTGGCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS CCA 72 bp TCAGCAGATGTGTCGCCACCCACCAAGTTCATACCCTaGCTCCCAACTTGTCAGCAGAGCCAAGGAACAAGC +
Preference number: 6 (lower is better)
Translates to: SADVSPPTKFIP*LPTCQQSQGTS
Trigger: GCTTGTTCCTTGGCTCTGCTGACAAGTTGGGAGCCAGGGTATGAACTTGGTGGGTGGCGACACATCTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573828.1
CDS CAA 90 bp ATTCTGCCCAGGATGCCACCGGTATTCAAAGAAGTGGCCAGCTCCTaGCTGCCCACCCCGGTTCCAGAAGCAAAGAGACACTTCCTATGT +
Preference number: 6 (lower is better)
Translates to: ILPRMPPVFKEVASS*LPTPVPEAKRHFLC
Trigger: ACATAGGAAGTGTCTCTTTGCTTCTGGAACCGGGGTGGGCAGCAAGGAGCTGGCCACTTCTTTGAATACCGGTGGCATCCTGGGCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575234.1
CDS CAA 72 bp CTTCATCTTGGGATACGCCCACTGGTTGGGACTCTGTaGGCTTCAGCCCGAAACTTGAGGCCTCTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: LHLGIRPLVGTL*ASARNLRPLLF
Trigger: AAACAGCAGAGGCCTCAAGTTTCGGGCTGAAGCCAACAGAGTCCCAACCAGTGGGCGTATCCCAAGATGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000498240.6
ENST00000571101.5
ENST00000572999.5
ENST00000573828.1
ENST00000574298.6
ENST00000575812.1
ENST00000617839.1
ENST00000669516.2
CDS CAA 90 bp TCCAAAATTCTTCATCTTGGGATACGCCCACTGGTTGGGACTCTGTaGGCTTCAGCCCGAAACTTGAGGCCTCTGCTGTTTCTCCCAAGA +
Preference number: 6 (lower is better)
Translates to: SKILHLGIRPLVGTL*ASARNLRPLLFLPR
Trigger: TCTTGGGAGAAACAGCAGAGGCCTCAAGTTTCGGGCTGAAGCCAACAGAGTCCCAACCAGTGGGCGTATCCCAAGATGAAGAATTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000498240.6
ENST00000571101.5
ENST00000572999.5
ENST00000573828.1
ENST00000574298.6
ENST00000575812.1
ENST00000669516.2
CDS CCA 72 bp TTCCAAAATTCTTCATCTTGGGATACGCCCACTGGTTaGGACTCTGTTGGCTTCAGCCCGAAACTTGAGGCC +
Preference number: 6 (lower is better)
Translates to: FQNSSSWDTPTG*DSVGFSPKLEA
Trigger: GGCCTCAAGTTTCGGGCTGAAGCCAACAGAGTCCCAACCAGTGGGCGTATCCCAAGATGAAGAATTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000498240.6
ENST00000571101.5
ENST00000572999.5
ENST00000573828.1
ENST00000574298.6
ENST00000575812.1
ENST00000617839.1
ENST00000669516.2
CDS CCA 72 bp CTGTTCTCTAGGCCTACTCCCACTTTCATCCACAGTTaGCATTTCTACTGCTGCCTGGAAGGACATCATAGT +
Preference number: 6 (lower is better)
Translates to: LFSRPTPTFIHS*HFYCCLEGHHS
Trigger: ACTATGATGTCCTTCCAGGCAGCAGTAGAAATGCCAACTGTGGATGAAAGTGGGAGTAGGCCTAGAGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575812.1
CDS GCA 72 bp AGTACGCAGCCACTTTCAGATCTACCATCATCATTCTaGTCTAGGAAGTTCTGCTCCTGTGTTAAGACACCC +
Preference number: 6 (lower is better)
Translates to: STQPLSDLPSSF*SRKFCSCVKTP
Trigger: GGGTGTCTTAACACAGGAGCAGAACTTCCTAGAGCAGAATGATGATGGTAGATCTGAAAGTGGCTGCGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000575234.1
ENST00000612186.1
ENST00000669516.2
CDS GCA 72 bp CAAACATGTATTGAGTGGCTATGGTGTGTTAGGCACTaGTCGAGGGCTAGGGATATAGTAGTGAAGAAGACC +
Preference number: 6 (lower is better)
Translates to: QTCIEWLWCVRH*SRARDIVVKKT
Trigger: GGTCTTCTTCACTACTATATCCCTAGCCCTCGAGCAGTGCCTAACACACCATAGCCACTCAATACATGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575253.1
CDS GCA 72 bp TGGCATTTCTACTGCTGCCTGGAAGGACATCATAGTTaGTATCAAGGCTGGTTTTACAAATCCACAGAGCAG +
Preference number: 6 (lower is better)
Translates to: WHFYCCLEGHHS*YQGWFYKSTEQ
Trigger: CTGCTCTGTGGATTTGTAAAACCAGCCTTGATAGCAACTATGATGTCCTTCCAGGCAGCAGTAGAAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575812.1
CDS CCA 72 bp CCACTTTCATCCACAGTTGGCATTTCTACTGCTGCCTaGAAGGACATCATAGTTGCTATCAAGGCTGGTTTT +
Preference number: 6 (lower is better)
Translates to: PLSSTVGISTAA*KDIIVAIKAGF
Trigger: AAAACCAGCCTTGATAGCAACTATGATGTCCTTCCAGGCAGCAGTAGAAATGCCAACTGTGGATGAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575812.1
CDS GCA 72 bp TCAGATCTACCATCATCATTCTGCTCTAGGAAGTTCTaGTCCTGTGTTAAGACACCCAATTGGTACCACGTT +
Preference number: 6 (lower is better)
Translates to: SDLPSSFCSRKF*SCVKTPNWYHV
Trigger: AACGTGGTACCAATTGGGTGTCTTAACACAGGAGCAGAACTTCCTAGAGCAGAATGATGATGGTAGATCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000575234.1
ENST00000612186.1
ENST00000669516.2
CDS GCA 72 bp CTATATCCAACCAAGGGGGAACCAAGCTCCAGAAGTTaGAGGGAATATAAGCTGGTCTTATTAACTCTTCAG +
Preference number: 6 (lower is better)
Translates to: LYPTKGEPSSRS*REYKLVLLTLQ
Trigger: CTGAAGAGTTAATAAGACCAGCTTATATTCCCTGCAACTTCTGGAGCTTGGTTCCCCCTTGGTTGGATATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575253.1
CDS CCA 72 bp TGCTGCCTGGAAGGACATCATAGTTGCTATCAAGGCTaGTTTTACAAATCCACAGAGCAGGGTATTCAAAAA +
Preference number: 6 (lower is better)
Translates to: CCLEGHHSCYQG*FYKSTEQGIQK
Trigger: TTTTTGAATACCCTGCTCTGTGGATTTGTAAAACCAGCCTTGATAGCAACTATGATGTCCTTCCAGGCAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575812.1
CDS CCA 72 bp AAAATGAGGTCAAGGACTGGTAACTTAACAGTGAACTaGTCCACTAATCCCAGACTGTTTCAGGATGACCAA +
Preference number: 6 (lower is better)
Translates to: KMRSRTGNLTVN*STNPRLFQDDQ
Trigger: TTGGTCATCCTGAAACAGTCTGGGATTAGTGGACCAGTTCACTGTTAAGTTACCAGTCCTTGACCTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575253.1
CDS GCA 72 bp ACTTTCATCTACTATAGGGAGGACATTACCCATCAGTaGATTTCCTGTCCTTGGCTATTCTGTTGGGATTTT +
Preference number: 6 (lower is better)
Translates to: TFIYYREDITHQ*ISCPWLFCWDF
Trigger: AAAATCCCAACAGAATAGCCAAGGACAGGAAATGCACTGATGGGTAATGTCCTCCCTATAGTAGATGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573828.1
CDS GCA 72 bp AATGACCTACCTAATCCATCTAATTTCTCAACTAACTaGCACCATCTCTACTATATCCACCTGCATCCTATT +
Preference number: 6 (lower is better)
Translates to: NDLPNPSNFSTN*HHLYYIHLHPI
Trigger: AATAGGATGCAGGTGGATATAGTAGAGATGGTGGCAGTTAGTTGAGAAATTAGATGGATTAGGTAGGTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575234.1
ENST00000612186.1
CDS TCA 72 bp GTGTTAAGACACCCAATTGGTACCACGTTTAACAAATaGGATCCTGTCTGGTCTTGTACAAAAGCAATAAAA +
Preference number: 6 (lower is better)
Translates to: VLRHPIGTTFNK*DPVWSCTKAIK
Trigger: TTTTATTGCTTTTGTACAAGACCAGACAGGATCTCATTTGTTAAACGTGGTACCAATTGGGTGTCTTAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000498240.6
ENST00000575234.1
ENST00000612186.1
ENST00000669516.2
CDS TCA 72 bp AAGCAGAGACTAAGAAATAAATCTACGGTGGATCAATaGAAAGGATATAGGGAATGGGAATCCAGTACATGT +
Preference number: 6 (lower is better)
Translates to: KQRLRNKSTVDQ*KGYREWESSTC
Trigger: ACATGTACTGGATTCCCATTCCCTATATCCTTTTCATTGATCCACCGTAGATTTATTTCTTAGTCTCTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575253.1