RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF74 (Homo sapiens)

Ensembl gene IDs: ENSG00000185252

Ensembl transcript IDs: ENST00000357502.5, ENST00000400451.7, ENST00000403682.7, ENST00000405993.2, ENST00000420626.1, ENST00000437275.5, ENST00000476678.1, ENST00000493734.5, ENST00000611540.4

Found 680 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGACGTCCCAGACCATGGCAGGTGCGGGCGCCCAGGGCGCAGCCTaGCTCCTCTGCAGAGCACCTGCCTGGCGCCCCCACGCCTGCGCC +
Preference number: 1 (lower is better)
Translates to: GTSQTMAGAGAQGAA*LLCRAPAWRPHACA
Trigger: GGCGCAGGCGTGGGGGCGCCAGGCAGGTGCTCTGCAGAGGAGTCAGGCTGCGCCCTGGGCGCCCGCACCTGCCATGGTCTGGGACGTCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR TCA 90 bp ATGATGGGCTCCTGGGCCGGTTCTTCTTTGCAAATGCCCTGCTGTTaGGAGGGCACCGCCTTCAGCTCCCATTCTGGACAGGGCCCTCTG +
Preference number: 1 (lower is better)
Translates to: MMGSWAGSSLQMPCC*EGTAFSSHSGQGPL
Trigger: CAGAGGGCCCTGTCCAGAATGGGAGCTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGAGCCCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR GCA 90 bp CTGGTCAGTGAAGAGGAGCTTCCAGACACACCCATCCTGATGTTGTaGCCATCTTCCCTGAATGCACTGGGCACCTGCCTGGTAGCTCCC +
Preference number: 1 (lower is better)
Translates to: LVSEEELPDTPILML*PSSLNALGTCLVAP
Trigger: GGGAGCTACCAGGCAGGTGCCCAGTGCATTCAGGGAAGATGGGCACAACATCAGGATGGGTGTGTCTGGAAGCTCCTCTTCACTGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR CCA 90 bp GTTAGTTTCGAGGTTTGCTCCCCAGGGAGAAATTCCTGCCAGCTCTaGGGGGAACCACGCACAAGAGCTTTGCCACATCCAGCGCGTCGA +
Preference number: 1 (lower is better)
Translates to: VSFEVCSPGRNSCQL*GEPRTRALPHPARR
Trigger: TCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTGGTTCCCCCCAGAGCTGGCAGGAATTTCTCCCTGGGGAGCAAACCTCGAAACTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR GCA 90 bp GCTTCCAGACACACCCATCCTGATGTTGTGCCCATCTTCCCTGAATaGACTGGGCACCTGCCTGGTAGCTCCCAATTTCTCACTAGGGGC +
Preference number: 1 (lower is better)
Translates to: ASRHTHPDVVPIFPE*TGHLPGSSQFLTRG
Trigger: GCCCCTAGTGAGAAATTGGGAGCTACCAGGCAGGTGCCCAGTGCATTCAGGGAAGATGGGCACAACATCAGGATGGGTGTGTCTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR TCA 90 bp AATGACTCTCAACACTCCTCCTGGAGTGTGGCCCTTCTGGGGAGGTaGCTGACTTTAACTAGAGGAGGCACCCTGGCATGCAGACCTGAT +
Preference number: 1 (lower is better)
Translates to: NDSQHSSWSVALLGR*LTLTRGGTLACRPD
Trigger: ATCAGGTCTGCATGCCAGGGTGCCTCCTCTAGTTAAAGTCAGTCACCTCCCCAGAAGGGCCACACTCCAGGAGGAGTGTTGAGAGTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR TCA 90 bp ACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATaGCTCTCAACACTCCTCCTGGAGTGTGGCCCTTCTGGGGAGGTG +
Preference number: 1 (lower is better)
Translates to: TSRPIKENRWQDYLK*LSTLLLECGPSGEV
Trigger: CACCTCCCCAGAAGGGCCACACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR GCA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTaGTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAA +
Preference number: 1 (lower is better)
Translates to: GDVGMLGSGYNDAGP*CDSCGNAPDCTVTK
Trigger: TTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR TCA 90 bp TGGTCTGGATCTAGGAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTaGGTAGCTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTT +
Preference number: 1 (lower is better)
Translates to: WSGSRSQGGPGCFPC*VAQKAATDTKAHHV
Trigger: AACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTCCTAGATCCAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCACGGGGGCCTTGGTTCTaGCCTCAGTGGCCTGGACGT +
Preference number: 2 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPRGPWF*PQWPGR
Trigger: ACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCCG...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR TCA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCAGACAGTGGTTCTGGCTaGAGGCTCTGCCGCACTCGC +
Preference number: 2 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPDSGSG*RLCRTR
Trigger: GCGAGTGCGGCAGAGCCTTCAGCCAGAACCACTGTC...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR TCA 90 bp TGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCTCTGGTGCCGAGGGGCCGCTCCATaGTGGGCTCCTGGGCCGGTT +
Preference number: 2 (lower is better)
Translates to: CLLNWMAKGFPSLCSLWCRGAAP*WAPGPV
Trigger: AACCGGCCCAGGAGCCCATCATGGAGCGGCCCCTCG...GCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR GCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACACCAGACCATGGCAGGTaGGGGCGCCCAGGGCGCAGC +
Preference number: 2 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTPDHGR*GRPGRS
Trigger: GCTGCGCCCTGGGCGCCCGCACCTGCCATGGTCTGG...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR TCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATGGCGCGAGCGGCTGTTaGAGGCCTTCTCGCAGTCGC +
Preference number: 2 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDGASGC*RPSRSR
Trigger: GCGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCC...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR TCA 90 bp CTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCGGTACGCGTGGCAGCTaGAGCCCTTCCCGCAGTCGG +
Preference number: 2 (lower is better)
Translates to: LSRCLLNWMAKGFPSLCSGTRGS*SPSRSR
Trigger: CCGACTGCGGGAAGGGCTTCAGCTGCCACGCGTACC...GCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp CTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCGTGTGCGTCCTCTGGTaGAGGGTGAGGCGCGAGCGG +
Preference number: 2 (lower is better)
Translates to: LSRCLLNWMAKGFPSLCSVCVLW*RVRRER
Trigger: CCGCTCGCGCCTCACCCTCCACCAGAGGACGCACAC...GCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACGCCTTCTCCCGGCTGTaGCAGCGCCGGTGCAGCGTG +
Preference number: 2 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYAFSRL*QRRCSV
Trigger: CACGCTGCACCGGCGCTGGCACAGCCGGGAGAAGGC...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCCCTCTGCAGAGCACCTaGCTGGCGCCCCCACGCCTG +
Preference number: 2 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNAPLQST*LAPPRL
Trigger: CAGGCGTGGGGGCGCCAGGCAGGTGCTCTGCAGAGG...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR TCA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAAGCGCCGGTGCAGCGTaGGGGAGGAGCTCTGGCGGA +
Preference number: 2 (lower is better)
Translates to: AARHVVCAEQVFVELDGQSAGAA*GRSSGG
Trigger: TCCGCCAGAGCTCCTCCCTCACGCTGCACCGGCGCT...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR TCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGGGCGCGAGCGGCTGTTaGAGGCCTTCTCGCAGTCGC +
Preference number: 2 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGGASGC*RPSRSR
Trigger: GCGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCC...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR TCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGGGTACGCGTGGCAGCTaGAGCCCTTCCCGCAGTCGG +
Preference number: 2 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGGTRGS*SPSRSR
Trigger: CCGACTGCGGGAAGGGCTTCAGCTGCCACGCGTACC...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACCTGTGCCAGCGCCGGTaGAGCGTGAGGGAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYLCQRR*SVREEL
Trigger: GAGCTCCTCCCTCACGCTGCACCGGCGCTGGCACAG...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTGGCTTCCCCTCGCTGTaGAGCCTCTGGTGCTCAGTG +
Preference number: 2 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGGFPSL*SLWCSV
Trigger: CACTGAGCACCAGAGGCTGCACAGCGAGGGGAAGCC...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCACTTTTCTGGCTCACTTaGCGTGGAGGCGTTTTCCCC +
Preference number: 2 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPLFWLT*RGGVFP
Trigger: GGGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAG...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp TGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCTCTGGTGCCGCTGCCGGCGCACCTaGGGGAACTTTTCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: CLLNWMAKGFPSLCSLWCRCRRT*GNFSGS
Trigger: TGAGCCAGAAAAGTTCCCCCAGGTGCGCCGGCAGCG...GCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR CAA 90 bp CATGATGGGCTCCTGGGCCGGTTCTTCTTTGCAAATGCCCTGCTGTaGAGAGGGCACCGCCTTCAGCTCCCATTCTGGACAGGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: HDGLLGRFFFANALL*RGHRLQLPFWTGPS
Trigger: AGAGGGCCCTGTCCAGAATGGGAGCTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGAGCCCATCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR GCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACAGCCCAGGGTGGCCCTaGCCAGCCCTGGTCAGTGAA +
Preference number: 2 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYSPGWP*PALVSE
Trigger: TTCACTGACCAGGGCTGGGCAGGGCCACCCTGGGCT...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTCTGGCTCACTTGGCGTaGAGGCGTTTTCCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGLAHLA*RRFPLH
Trigger: GTGCAGGGGAAAACGCCTCCACGCCAAGTGAGCCAG...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGTGTGCGTCCTCTGGTaGAGGGTGAGGCGCGAGCGG +
Preference number: 2 (lower is better)
Translates to: AARHVVCAEQVFVELDGQVCVLW*RVRRER
Trigger: CCGCTCGCGCCTCACCCTCCACCAGAGGACGCACAC...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCAAGGTGTTTGTTGAACTaGATGGCCAAGGGCTTCCCC +
Preference number: 2 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPRCLLN*MAKGFP
Trigger: GGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCT...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp TGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCTCTGGTGCCTGCCCTCAGTGGCCTaGACGTTCTTGCGTGTGTCC +
Preference number: 2 (lower is better)
Translates to: CLLNWMAKGFPSLCSLWCLPSVA*TFLRVS
Trigger: GGACACACGCAAGAACGTCCAGGCCACTGAGGGCAG...GCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR CCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCGTCTCGCGGGGGCCTTaGTTCTGCCCTCAGTGGCCT +
Preference number: 2 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNAVSRGP*FCPQWP
Trigger: AGGCCACTGAGGGCAGAACCAAGGCCCCCGCGAGAC...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR TCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACAGCGCCGGTGCAGCGTaGGGGAGGAGCTCTGGCGGA +
Preference number: 2 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYSAGAA*GRSSGG
Trigger: TCCGCCAGAGCTCCTCCCTCACGCTGCACCGGCGCT...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR TCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAAAGCGCCGGTGCAGCGTaGGGGAGGAGCTCTGGCGGA +
Preference number: 2 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQSAGAA*GRSSGG
Trigger: TCCGCCAGAGCTCCTCCCTCACGCTGCACCGGCGCT...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357502.5
ENST00000437275.5
3UTR-3UTR TCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGGGTAGGCGTGGGAGCTaGAGGCTTTGCCGCACTCGT +
Preference number: 2 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGGRRGS*RLCRTR
Trigger: ACGAGTGCGGCAAAGCCTTCAGCTCCCACGCCTACC...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGGTGTGCACCCGCAGGTaGATGCTGAGCAGCGAGCTG +
Preference number: 2 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGVCTRR*MLSSEL
Trigger: CAGCTCGCTGCTCAGCATGCACCTGCGGGTGCACAC...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAAGCCCAGGGTGGCCCTaGCCAGCCCTGGTCAGTGAA +
Preference number: 2 (lower is better)
Translates to: AARHVVCAEQVFVELDGQSPGWP*PALVSE
Trigger: TTCACTGACCAGGGCTGGGCAGGGCCACCCTGGGCT...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR CCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGGGGAACTTTTCTaGCTCACTTGGCGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGLGELF*LTWRGG
Trigger: GCCTCCACGCCAAGTGAGCCAGAAAAGTTCCCCCAG...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGCGCTGCCGGCGCACCTaGGGGAACTTTTCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: LPVSEECWDRESRLFQGLRCRRT*GNFSGS
Trigger: TGAGCCAGAAAAGTTCCCCCAGGTGCGCCGGCAGCG...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR CCA 90 bp CTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCGGCTTGTCCCCGCTGTaGATCTTCTCATGCACGGTG +
Preference number: 2 (lower is better)
Translates to: LSRCLLNWMAKGFPSLCSGLSPL*IFSCTV
Trigger: CACCGTGCATGAGAAGATCCACAGCGGGGACAAGCC...GCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGTGGAGCCCGTCTCCCTaGGCTTCAGCTTCCCCTCTC +
Preference number: 2 (lower is better)
Translates to: LPVSEECWDRESRLFQGLWSPSP*ASASPL
Trigger: GAGAGGGGAAGCTGAAGCCCAGGGAGACGGGCTCCA...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGCATGTGGGACCACCATaGAGCCCGTCTCCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: LPVSEECWDRESRLFQGLHVGPP*SPSPWA
Trigger: AGCCCAGGGAGACGGGCTCCATGGTGGTCCCACATG...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACTGCAGAGCACCTGCCTaGCGCCCCCACGCCTGCGCC +
Preference number: 2 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNCRAPA*RPHACA
Trigger: GGCGCAGGCGTGGGGGCGCCAGGCAGGTGCTCTGCA...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR CAA 90 bp GCCCTGGTCAGTGAAGAGGAGCTTCCAGACACACCCATCCTGATGTaGTGCCCATCTTCCCTGAATGCACTGGGCACCTGCCTGGTAGCT +
Preference number: 2 (lower is better)
Translates to: ALVSEEELPDTPILM*CPSSLNALGTCLVA
Trigger: AGCTACCAGGCAGGTGCCCAGTGCATTCAGGGAAGATGGGCACAACATCAGGATGGGTGTGTCTGGAAGCTCCTCTTCACTGACCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGTGTGCCCATCTTCCCTaGATGCACTGGGCACCTGCC +
Preference number: 2 (lower is better)
Translates to: LPVSEECWDRESRLFQGLCAHLP*MHWAPA
Trigger: GGCAGGTGCCCAGTGCATTCAGGGAAGATGGGCACA...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTGTGCCAGCGCCGGTaGAGCGTGAGGGAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYLCQRR*SVREEL
Trigger: GAGCTCCTCCCTCACGCTGCACCGGCGCTGGCACAG...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACCATAGTGAGAAGCCCTaGAGGGCAGCCTCACCAGCC +
Preference number: 2 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYHSEKP*RAASPA
Trigger: GGCTGGTGAGGCTGCCCTGCAGGGCTTCTCACTATG...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACCTGGCTCACTTGGCGTaGAGGCGTTTTCCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYLAHLA*RRFPLH
Trigger: GTGCAGGGGAAAACGCCTCCACGCCAAGTGAGCCAG...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAAGTGTGCGTCCTCTGGTaGAGGGTGAGGCGCGAGCGG +
Preference number: 2 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQVCVLW*RVRRER
Trigger: CCGCTCGCGCCTCACCCTCCACCAGAGGACGCACAC...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357502.5
ENST00000437275.5
3UTR-3UTR CCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACCCGTGTGCGTCCTCTaGTGGAGGGTGAGGCGCGAG +
Preference number: 2 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSPVCVL*WRVRRE
Trigger: CTCGCGCCTCACCCTCCACCAGAGGACGCACACGGG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp TGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCTCTGGTGCATGAGACAGTGGTTCTaGCTGAAGGCTCTGCCGCAC +
Preference number: 2 (lower is better)
Translates to: CLLNWMAKGFPSLCSLWCMRQWF*LKALPH
Trigger: GTGCGGCAGAGCCTTCAGCCAGAACCACTGTCTCAT...GCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATATGAGACAGTGGTTCTaGCTGAAGGCTCTGCCGCAC +
Preference number: 2 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDMRQWF*LKALPH
Trigger: GTGCGGCAGAGCCTTCAGCCAGAACCACTGTCTCAT...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACCATCCAGCGCGTCGATaGGATCCACGTCCCTCAGTC +
Preference number: 2 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYHPARR*DPRPSV
Trigger: GACTGAGGGACGTGGATCCCATCGACGCGCTGGATG...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATGCTTCTTCTGTGACCTaGGCTGGTGACTGGTGCTAC +
Preference number: 2 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDASSVT*AGDWCY
Trigger: GTAGCACCAGTCACCAGCCCAGGTCACAGAAGAAGC...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTGTCTCTGAAGAGTGTTaGGACAGGGAGAGCCGCCTT +
Preference number: 2 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGVSEEC*DRESRL
Trigger: AAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGAC...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCACCGGAGTGGATTTTCTaGTGTTTAATGAGACAGTGG +
Preference number: 2 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPPEWIF*CLMRQW
Trigger: CCACTGTCTCATTAAACATCAGAAAATCCACTCCGG...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACAGTCCAGCATCCCCTaGACCCAGCAGGCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSQSSIP*TQQAAR
Trigger: CCTGGCAGCCTGCTGGGTGCAGGGGATGCTGGACTG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTAATGATGCTGGGCCGTaGTGTGACAGCTGTGGGAAT +
Preference number: 2 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGNDAGP*CDSCGN
Trigger: ATTCCCACAGCTGTCACAGCACGGCCCAGCATCATT...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAGCCCAGGGTGGCCCTaGCCAGCCCTGGTCAGTGAA +
Preference number: 2 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSSPGWP*PALVSE
Trigger: TTCACTGACCAGGGCTGGGCAGGGCCACCCTGGGCT...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACGGCTTGTCCCCGCTGTaGATCTTCTCATGCACGGTG +
Preference number: 2 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYGLSPL*IFSCTV
Trigger: CACCGTGCATGAGAAGATCCACAGCGGGGACAAGCC...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGTGGTTCTGCCCTCAGTaGCCTGGACGTTCTTGCGTG +
Preference number: 2 (lower is better)
Translates to: LPVSEECWDRESRLFQGLWFCPQ*PGRSCV
Trigger: CACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCA...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR TCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGTGTGACCTGGGCTGGTaGCTGGTGCTACATAGTGAG +
Preference number: 2 (lower is better)
Translates to: LPVSEECWDRESRLFQGLCDLGW*LVLHSE
Trigger: CTCACTATGTAGCACCAGTCACCAGCCCAGGTCACA...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGGTGTGCACCCGCAGGTaGATGCTGAGCAGCGAGCTG +
Preference number: 2 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVVCTRR*MLSSEL
Trigger: CAGCTCGCTGCTCAGCATGCACCTGCGGGTGCACAC...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCTTTTCTGGCTCACTTaGCGTGGAGGCGTTTTCCCC +
Preference number: 2 (lower is better)
Translates to: QAARHVVCAEQVFVELDGLFWLT*RGGVFP
Trigger: GGGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAG...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATATGAGAGATCACATCTaGCTTGTGCAGTGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDMRDHI*LVQWRS
Trigger: GGACCTCCACTGCACAAGCCAGATGTGATCTCTCAT...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR CCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGCTGGACAGGGCCCTCTaGGGACTTCCCTCTGCATGC +
Preference number: 2 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVLDRAL*GLPSAC
Trigger: GCATGCAGAGGGAAGTCCCCAGAGGGCCCTGTCCAG...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR TCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACGGTAGGCGTGGGAGCTaGAGGCTTTGCCGCACTCGT +
Preference number: 2 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNGRRGS*RLCRTR
Trigger: ACGAGTGCGGCAAAGCCTTCAGCTCCCACGCCTACC...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR TCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACAGTGGTTCTGGCTaGAGGCTCTGCCGCACTCGC +
Preference number: 2 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQDSGSG*RLCRTR
Trigger: GCGAGTGCGGCAGAGCCTTCAGCCAGAACCACTGTC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR TCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAACCCAGCCCTGGTCAGTaGAGAGGAGCTTCCAGACAC +
Preference number: 2 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQPSPGQ*RGASRH
Trigger: GTGTCTGGAAGCTCCTCTTCACTGACCAGGGCTGGG...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACAAATGCCCTGCTGTTaGGAGGGCACCGCCTTCAGC +
Preference number: 2 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSQMPCC*EGTAFS
Trigger: GCTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR GCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCTGTGCCAGCGCCGGTaGAGCGTGAGGGAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRLCQRR*SVREEL
Trigger: GAGCTCCTCCCTCACGCTGCACCGGCGCTGGCACAG...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCCTTCTCCCGGCTGTaGCAGCGCCGGTGCAGCGTG +
Preference number: 2 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKAFSRL*QRRCSV
Trigger: CACGCTGCACCGGCGCTGGCACAGCCGGGAGAAGGC...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCCTGTGGATCTTCTCATaGACGGTGAGGGATGAGTGG +
Preference number: 2 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNALWIFS*TVRDEW
Trigger: CCACTCATCCCTCACCGTGCATGAGAAGATCCACAG...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR GCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGGCTTCCCCTCGCTGTaGAGCCTCTGGTGCTCAGTG +
Preference number: 2 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQGFPSL*SLWCSV
Trigger: CACTGAGCACCAGAGGCTGCACAGCGAGGGGAAGCC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAAGGAGGCACCCTGGCATaGAGACCTGATGGGGGTGAT +
Preference number: 2 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQGGTLA*RPDGGD
Trigger: ATCACCCCCATCAGGTCTGCATGCCAGGGTGCCTCC...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACGCTGCCGGCGCACCTaGGGGAACTTTTCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQRCRRT*GNFSGS
Trigger: TGAGCCAGAAAAGTTCCCCCAGGTGCGCCGGCAGCG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACGTGTGGATGCGGTGGTaGCGTGTGAGGTGTGTACGC +
Preference number: 2 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYVWMRW*RVRCVR
Trigger: GCGTACACACCTCACACGCCACCACCGCATCCACAC...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCACCCGTGTGCGTCCTCTaGTGGAGGGTGAGGCGCGAG +
Preference number: 2 (lower is better)
Translates to: VSGARPRIQQLIYLLLISPVCVL*WRVRRE
Trigger: CTCGCGCCTCACCCTCCACCAGAGGACGCACACGGG...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357502.5
ENST00000437275.5
3UTR-3UTR CCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACAGGTGTTTGTTGAACTaGATGGCCAAGGGCTTCCCC +
Preference number: 2 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYRCLLN*MAKGFP
Trigger: GGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCT...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTAGAGGAGGCACCCTaGCATGCAGACCTGATGGGG +
Preference number: 2 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYLEEAP*HADLMG
Trigger: CCCCATCAGGTCTGCATGCCAGGGTGCCTCCTCTAG...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACACCTGGGCTGGTGACTaGTGCTACATAGTGAGAAGC +
Preference number: 2 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYTWAGD*CYIVRS
Trigger: GCTTCTCACTATGTAGCACCAGTCACCAGCCCAGGT...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGGAGGCACCCTGGCATaGAGACCTGATGGGGGTGAT +
Preference number: 2 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQGGTLA*RPDGGD
Trigger: ATCACCCCCATCAGGTCTGCATGCCAGGGTGCCTCC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACCATAGTGAGAAGCCCTaGAGGGCAGCCTCACCAGCC +
Preference number: 2 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNHSEKP*RAASPA
Trigger: GGCTGGTGAGGCTGCCCTGCAGGGCTTCTCACTATG...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACGCCTTTTCCAGGGTTTaGAAAACAGCTCCATGTGGG +
Preference number: 2 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYAFSRV*KTAPCG
Trigger: CCCACATGGAGCTGTTTTGCAAACCCTGGAAAAGGC...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGGACTTCCCTCTGCATaGTCCATGGCTCCTCGCCTC +
Preference number: 2 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQGLPSA*SMAPRL
Trigger: GAGGCGAGGAGCCATGGAGCATGCAGAGGGAAGTCC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR CCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAACTGGGGGAACTTTTCTaGCTCACTTGGCGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQLGELF*LTWRGG
Trigger: GCCTCCACGCCAAGTGAGCCAGAAAAGTTCCCCCAG...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357502.5
ENST00000437275.5
3UTR-3UTR CCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGCAAGGCTCCCACACCTaGAGGAAGGTGGTCTGGATC +
Preference number: 2 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVQGSHT*RKVVWI
Trigger: GATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTG...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACAAGGCTCCCACACCTaGAGGAAGGTGGTCTGGATC +
Preference number: 2 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSQGSHT*RKVVWI
Trigger: GATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGTaGCCCTTCTGGGGAGGTGAC +
Preference number: 2 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNTPPGV*PFWGGD
Trigger: GTCACCTCCCCAGAAGGGCCACACTCCAGGAGGAGT...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTGGTAGGCGTGGGAGCTaGAGGCTTTGCCGCACTCGT +
Preference number: 2 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFAGRRGS*RLCRTR
Trigger: ACGAGTGCGGCAAAGCCTTCAGCTCCCACGCCTACC...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCAGGCTTCCCCTCGCTGTaGAGCCTCTGGTGCTCAGTG +
Preference number: 2 (lower is better)
Translates to: VSGARPRIQQLIYLLLISGFPSL*SLWCSV
Trigger: CACTGAGCACCAGAGGCTGCACAGCGAGGGGAAGCC...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357502.5
ENST00000437275.5
3UTR-3UTR GCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCACGCACAAGAGCTTTaGCACATCCAGCGCGTCGAT +
Preference number: 2 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYHAQEL*HIQRVD
Trigger: ATCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTG...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAATCACCCAGGCTGCAGTaGAGTGCTGTGAATCATGGC +
Preference number: 2 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQSPRLQ*SAVNHG
Trigger: GCCATGATTCACAGCACTGCACTGCAGCCTGGGTGA...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACGTTCTTCTTTGCAAATaGCCTGCTGTTGAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYVLLCK*PAVERA
Trigger: TGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAAC...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR CCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGGCTTGTCCCCGCTGTaGATCTTCTCATGCACGGTG +
Preference number: 2 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQGLSPL*IFSCTV
Trigger: CACCGTGCATGAGAAGATCCACAGCGGGGACAAGCC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACACACCTGGAGGAAGGTaGTCTGGATCTAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYTPGGR*SGSRSQ
Trigger: CTGGCTCCTAGATCCAGACCACCTTCCTCCAGGTGT...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAAGTCTCTGAAGAGTGTTaGGACAGGGAGAGCCGCCTT +
Preference number: 2 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQVSEEC*DRESRL
Trigger: AAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGAC...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAGCCCTTCTGGGGAGGTaGCTGACTTTAACTAGAGGA +
Preference number: 2 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSALLGR*LTLTRG
Trigger: TCCTCTAGTTAAAGTCAGTCACCTCCCCAGAAGGGC...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAAGCCCTTCTGGGGAGGTaGCTGACTTTAACTAGAGGA +
Preference number: 2 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQALLGR*LTLTRG
Trigger: TCCTCTAGTTAAAGTCAGTCACCTCCCCAGAAGGGC...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAACTGTCTTCCTGTCTCTaGAGAGTGTTGGGACAGGGA +
Preference number: 2 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQLSSCL*RVLGQG
Trigger: TCCCTGTCCCAACACTCTTCAGAGACAGGAAGACAG...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCTGCACCCAGCAGGCTaGCAGGCACGTAGTATGTGC +
Preference number: 2 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRLHPAG*QARSMC
Trigger: GCACATACTACGTGCCTGGCAGCCTGCTGGGTGCAG...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCAGGAGGCACCCTGGCATaGAGACCTGATGGGGGTGAT +
Preference number: 2 (lower is better)
Translates to: VSGARPRIQQLIYLLLISGGTLA*RPDGGD
Trigger: ATCACCCCCATCAGGTCTGCATGCCAGGGTGCCTCC...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAAAATGCACTGGGCACCTaGCTGGTAGCTCCCAATTTC +
Preference number: 2 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQNALGT*LVAPNF
Trigger: GAAATTGGGAGCTACCAGGCAGGTGCCCAGTGCATT...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAATGGGCTGGTGACTGGTaGTACATAGTGAGAAGCCCT +
Preference number: 2 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQWAGDW*YIVRSP
Trigger: AGGGCTTCTCACTATGTAGCACCAGTCACCAGCCCA...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCTGGCTCACTTGGCGTaGAGGCGTTTTCCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRLAHLA*RRFPLH
Trigger: GTGCAGGGGAAAACGCCTCCACGCCAAGTGAGCCAG...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTGTGTGGATGCGGTGGTaGCGTGTGAGGTGTGTACGC +
Preference number: 2 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFAVWMRW*RVRCVR
Trigger: GCGTACACACCTCACACGCCACCACCGCATCCACAC...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAATGAGACAGTGGTTCTaGCTGAAGGCTCTGCCGCAC +
Preference number: 2 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQMRQWF*LKALPH
Trigger: GTGCGGCAGAGCCTTCAGCCAGAACCACTGTCTCAT...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAACACCTGGAGGAAGGTaGTCTGGATCTAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQTPGGR*SGSRSQ
Trigger: CTGGCTCCTAGATCCAGACCACCTTCCTCCAGGTGT...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACGTGATCCCCTTGCCTTaGCCTCCCACAGTGTTAAGA +
Preference number: 2 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYVIPLP*PPTVLR
Trigger: TCTTAACACTGTGGGAGGCCAAGGCAAGGGGATCAC...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACTGGTCCTAGACTCCTaGGCTCAAGTGATCCCCTTG +
Preference number: 2 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQLVLDS*AQVIPL
Trigger: CAAGGGGATCACTTGAGCCCAGGAGTCTAGGACCAG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACGCTTCTTCTGTGACCTaGGCTGGTGACTGGTGCTAC +
Preference number: 2 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNASSVT*AGDWCY
Trigger: GTAGCACCAGTCACCAGCCCAGGTCACAGAAGAAGC...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGGTGCGAGCTCCAGTTaGACATCTCCCCACATTTCT +
Preference number: 2 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQGASSS*TSPHIS
Trigger: AGAAATGTGGGGAGATGTTCAACTGGAGCTCGCACC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR TCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACGGGTGCTTTCCTTGTTaGGTAGCTCAGAAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYGCFPC*VAQKAA
Trigger: AGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCC...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAAATGATGCTGGGCCGTaGTGTGACAGCTGTGGGAAT +
Preference number: 2 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQNDAGP*CDSCGN
Trigger: ATTCCCACAGCTGTCACAGCACGGCCCAGCATCATT...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGCCCATCCTGATGTTGTaGCCATCTTCCCTGAATGCA +
Preference number: 2 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVPILML*PSSLNA
Trigger: TGCATTCAGGGAAGATGGGCACAACATCAGGATGGG...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCCCATCCTGATGTTGTaGCCATCTTCCCTGAATGCA +
Preference number: 2 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYPILML*PSSLNA
Trigger: TGCATTCAGGGAAGATGGGCACAACATCAGGATGGG...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAAGCCTTTTCCAGGGTTTaGAAAACAGCTCCATGTGGG +
Preference number: 2 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQAFSRV*KTAPCG
Trigger: CCCACATGGAGCTGTTTTGCAAACCCTGGAAAAGGC...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGTGGCCTGGACGTTCTTaGGTGTGTCCAGCAAGGGTC +
Preference number: 2 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRWPGRS*VCPARV
Trigger: GACCCTTGCTGGACACACGCAAGAACGTCCAGGCCA...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR CCA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTCTGGGGGAACTTTTCTaGCTCACTTGGCGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFALGELF*LTWRGG
Trigger: GCCTCCACGCCAAGTGAGCCAGAAAAGTTCCCCCAG...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGTCTCAACACTCCTCCTaGAGTGTGGCCCTTCTGGGG +
Preference number: 2 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRSQHSS*SVALLG
Trigger: CCCCAGAAGGGCCACACTCCAGGAGGAGTGTTGAGA...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACTACAGGTGTGAGCCATaGCACCCAACGATATCCCTT +
Preference number: 2 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYYRCEP*HPTISL
Trigger: AAGGGATATCGTTGGGTGCCATGGCTCACACCTGTA...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACAGTAGAGCTATTTACATaGGTTAAGTCCAGGAAATTC +
Preference number: 2 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTVELFT*VKSRKF
Trigger: GAATTTCCTGGACTTAACTCATGTAAATAGCTCTAC...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCACACGCACAAGAGCTTTaGCACATCCAGCGCGTCGAT +
Preference number: 2 (lower is better)
Translates to: VSGARPRIQQLIYLLLISHAQEL*HIQRVD
Trigger: ATCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTG...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357502.5
ENST00000437275.5
3UTR-3UTR CCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGACACCTGGAGGAAGGTaGTCTGGATCTAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRTPGGR*SGSRSQ
Trigger: CTGGCTCCTAGATCCAGACCACCTTCCTCCAGGTGT...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCTGGTCCTAGACTCCTaGGCTCAAGTGATCCCCTTG +
Preference number: 2 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRLVLDS*AQVIPL
Trigger: CAAGGGGATCACTTGAGCCCAGGAGTCTAGGACCAG...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCATCACTAGGGGCTAAATaGCAAGAGGTGATGTTGGCA +
Preference number: 2 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSSLGAK*QEVMLA
Trigger: TGCCAACATCACCTCTTGCCATTTAGCCCCTAGTGA...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGCCGGAGTGGATTTTCTaGTGTTTAATGAGACAGTGG +
Preference number: 2 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVPEWIF*CLMRQW
Trigger: CCACTGTCTCATTAAACATCAGAAAATCCACTCCGG...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR TCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAATCAGAAAGCAGCTACTaGCACCAAAGCACATCATGT +
Preference number: 2 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQSESSY*HQSTSC
Trigger: ACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGA...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357502.5
ENST00000437275.5
3UTR-3UTR TCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACAAGACTACCTCAAATaGCTCTCAACACTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQQDYLK*LSTLLL
Trigger: CAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCTGTGGATCTTCTCATaGACGGTGAGGGATGAGTGG +
Preference number: 2 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRLWIFS*TVRDEW
Trigger: CCACTCATCCCTCACCGTGCATGAGAAGATCCACAG...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGTTAGTTTCGAGGTTTaGTCCCCAGGGAGAAATTCC +
Preference number: 2 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQVSFEV*SPGRNS
Trigger: GGAATTTCTCCCTGGGGAGCAAACCTCGAAACTAAC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCATGGGCTGGTGACTGGTaGTACATAGTGAGAAGCCCT +
Preference number: 2 (lower is better)
Translates to: VSGARPRIQQLIYLLLISWAGDW*YIVRSP
Trigger: AGGGCTTCTCACTATGTAGCACCAGTCACCAGCCCA...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATCTAGAGGAGGCACCCTaGCATGCAGACCTGATGGGG +
Preference number: 2 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNLEEAP*HADLMG
Trigger: CCCCATCAGGTCTGCATGCCAGGGTGCCTCCTCTAG...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCAGTGCTGTGAATCATaGCTCACTGCAGCCTTGACC +
Preference number: 2 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRQCCES*LTAALT
Trigger: GGTCAAGGCTGCAGTGAGCCATGATTCACAGCACTG...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACCTAAATGGCAAGAGGTaGTGTTGGCATGTTAGGATC +
Preference number: 2 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNLNGKR*CWHVRI
Trigger: GATCCTAACATGCCAACATCACCTCTTGCCATTTAG...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACTTCACTTTTTCCAAATaGCCACCACCCAAGATTATT +
Preference number: 2 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDFTFSK*PPPKII
Trigger: AATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAA...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATTCTCAACACTCCTCCTaGAGTGTGGCCCTTCTGGGG +
Preference number: 2 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNSQHSS*SVALLG
Trigger: CCCCAGAAGGGCCACACTCCAGGAGGAGTGTTGAGA...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCATACAGGTGTGAGCCATaGCACCCAACGATATCCCTT +
Preference number: 2 (lower is better)
Translates to: VSGARPRIQQLIYLLLISYRCEP*HPTISL
Trigger: AAGGGATATCGTTGGGTGCCATGGCTCACACCTGTA...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATTGTGACCTGGGCTGGTaGCTGGTGCTACATAGTGAG +
Preference number: 2 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNCDLGW*LVLHSE
Trigger: CTCACTATGTAGCACCAGTCACCAGCCCAGGTCACA...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGGTTAGTTTCGAGGTTTaGTCCCCAGGGAGAAATTCC +
Preference number: 2 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRVSFEV*SPGRNS
Trigger: GGAATTTCTCCCTGGGGAGCAAACCTCGAAACTAAC...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR GCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTAAACACACAGCTCTaGAGTAGAGCTATTTACATG +
Preference number: 2 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYLNTQL*SRAIYM
Trigger: CATGTAAATAGCTCTACTGCAGAGCTGTGTGTTTAG...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGAGGGCCGGTTCTTCTTTaGAAATGCCCTGCTGTTGAG +
Preference number: 2 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGGPVLL*KCPAVE
Trigger: CTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCC...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR CCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATCTGGTCCTAGACTCCTaGGCTCAAGTGATCCCCTTG +
Preference number: 2 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNLVLDS*AQVIPL
Trigger: CAAGGGGATCACTTGAGCCCAGGAGTCTAGGACCAG...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGTCACTAGGGGCTAAATaGCAAGAGGTGATGTTGGCA +
Preference number: 2 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRSLGAK*QEVMLA
Trigger: TGCCAACATCACCTCTTGCCATTTAGCCCCTAGTGA...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAGTAGAGCTATTTACATaGGTTAAGTCCAGGAAATTC +
Preference number: 2 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSVELFT*VKSRKF
Trigger: GAATTTCCTGGACTTAACTCATGTAAATAGCTCTAC...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCATTCACTTTTTCCAAATaGCCACCACCCAAGATTATT +
Preference number: 2 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSFTFSK*PPPKII
Trigger: AATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAA...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATAATGCACTGGGCACCTaGCTGGTAGCTCCCAATTTC +
Preference number: 2 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNNALGT*LVAPNF
Trigger: GAAATTGGGAGCTACCAGGCAGGTGCCCAGTGCATT...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATGGGTGCTTTCCTTGTTaGGTAGCTCAGAAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNGCFPC*VAQKAA
Trigger: AGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCC...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACTTCACTTTTTCCAAATaGCCACCACCCAAGATTATT +
Preference number: 2 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNFTFSK*PPPKII
Trigger: AATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAA...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATGCCTTTTCCAGGGTTTaGAAAACAGCTCCATGTGGG +
Preference number: 2 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNAFSRV*KTAPCG
Trigger: CCCACATGGAGCTGTTTTGCAAACCCTGGAAAAGGC...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR TCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATTATGGAGGAAACTCCTaGTTAAAGCCGTGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNYGGNS*LKPCQE
Trigger: CTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATA...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR GCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCTAAACACACAGCTCTaGAGTAGAGCTATTTACATG +
Preference number: 2 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRLNTQL*SRAIYM
Trigger: CATGTAAATAGCTCTACTGCAGAGCTGTGTGTTTAG...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR CCA 72 bp GCACCGCCTTCAGCTCCCATTCTGGACAGGGCCCTCTaGGGACTTCCCTCTGCATGCTCCATGGCTCCTCGC +
Preference number: 3 (lower is better)
Translates to: APPSAPILDRAL*GLPSACSMAPR
Trigger: GCGAGGAGCCATGGAGCATGCAGAGGGAAGTCCCCAGAGGGCCCTGTCCAGAATGGGAGCTGAAGGCGGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR CCA 72 bp CACACAGTCTCGCGGGGGCCTTGGTTCTGCCCTCAGTaGCCTGGACGTTCTTGCGTGTGTCCAGCAAGGGTC +
Preference number: 3 (lower is better)
Translates to: HTVSRGPWFCPQ*PGRSCVCPARV
Trigger: GACCCTTGCTGGACACACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCCGCGAGACTGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR GCA 72 bp TTTCCCCTGCACACAGTCTCGCGGGGGCCTTGGTTCTaGCCTCAGTGGCCTGGACGTTCTTGCGTGTGTCCA +
Preference number: 3 (lower is better)
Translates to: FPLHTVSRGPWF*PQWPGRSCVCP
Trigger: TGGACACACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCCGCGAGACTGTGTGCAGGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR CAA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACTGGCAGGTGAAGGCCTaGCCGCAGGAGCCGCACTGG +
Preference number: 3 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYWQVKA*PQEPHW
Trigger: CCAGTGCGGCTCCTGCGGCAAGGCCTTCACCTGCCA...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGAGGCGCGAGCGGCTGTaGAAGGCCTTCTCGCAGTCG +
Preference number: 3 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGRRERL*KAFSQS
Trigger: CGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCCT...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCAGTGCTGAGCAGGTGTTaGTTGAACTGGATGGCCAAG +
Preference number: 3 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPVLSRC*LNWMAK
Trigger: CTTGGCCATCCAGTTCAACAAACACCTGCTCAGCAC...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGTCTCGCGGGGGCCTaGGTTCTGCCCTCAGTGGCC +
Preference number: 3 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDSLAGA*VLPSVA
Trigger: GGCCACTGAGGGCAGAACCAAGGCCCCCGCGAGACT...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR GCA 72 bp ATTCTGGACAGGGCCCTCTGGGGACTTCCCTCTGCATaGTCCATGGCTCCTCGCCTCGTTCCAGATGAGAGA +
Preference number: 3 (lower is better)
Translates to: ILDRALWGLPSA*SMAPRLVPDER
Trigger: TCTCTCATCTGGAACGAGGCGAGGAGCCATGGAGCATGCAGAGGGAAGTCCCCAGAGGGCCCTGTCCAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR CAA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAAGGCGCGAGCGGCTGTaGAAGGCCTTCTCGCAGTCG +
Preference number: 3 (lower is better)
Translates to: AARHVVCAEQVFVELDGQRRERL*KAFSQS
Trigger: CGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCCT...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGTGGCAGGTGAAGGCCTaGCCGCAGGAGCCGCACTGG +
Preference number: 3 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVWQVKA*PQEPHW
Trigger: CCAGTGCGGCTCCTGCGGCAAGGCCTTCACCTGCCA...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACCCCTCGGGAACGCGTaGCTGGGCGAAGAGGGGACA +
Preference number: 3 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSPLGNA*LGEEGT
Trigger: TGTCCCCTCTTCGCCCAGCAACGCGTTCCCGAGGGG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR TCA 72 bp TCCTGGGCCGGTTCTTCTTTGCAAATGCCCTGCTGTTaGGAGGGCACCGCCTTCAGCTCCCATTCTGGACAG +
Preference number: 3 (lower is better)
Translates to: SWAGSSLQMPCC*EGTAFSSHSGQ
Trigger: CTGTCCAGAATGGGAGCTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR CAA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATCGCCTTTTCCAGGGTTaGCAAAACAGCTCCATGTGG +
Preference number: 3 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDRLFQG*QNSSMW
Trigger: CCACATGGAGCTGTTTTGCAAACCCTGGAAAAGGCG...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CAA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACAGAGATCACATCTGGCTaGTGCAGTGGAGGTCCTAGG +
Preference number: 3 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTEITSG*CSGGPR
Trigger: CCTAGGACCTCCACTGCACAAGCCAGATGTGATCTC...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR GCA 72 bp GGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTaGTGTGACAGCTGTGGGAATGCCCCTGACTGCACT +
Preference number: 3 (lower is better)
Translates to: GMLGSGYNDAGP*CDSCGNAPDCT
Trigger: AGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR GCA 72 bp GAAGAGGAGCTTCCAGACACACCCATCCTGATGTTGTaGCCATCTTCCCTGAATGCACTGGGCACCTGCCTG +
Preference number: 3 (lower is better)
Translates to: EEELPDTPILML*PSSLNALGTCL
Trigger: CAGGCAGGTGCCCAGTGCATTCAGGGAAGATGGGCACAACATCAGGATGGGTGTGTCTGGAAGCTCCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CAA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCACTTTTCTGGCTCACTaGGCGTGGAGGCGTTTTCCC +
Preference number: 3 (lower is better)
Translates to: QAARHVVCAEQVFVELDGTFLAH*AWRRFP
Trigger: GGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAGT...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACCGGTGCTCCAGAAGGTaGGTGCTCCAGGTGAAGGCC +
Preference number: 3 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNRCSRR*VLQVKA
Trigger: GGCCTTCACCTGGAGCACCAACCTTCTGGAGCACCG...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACGGTGCTCCAGAAGGTaGGTGCTCCAGGTGAAGGCC +
Preference number: 3 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQRCSRR*VLQVKA
Trigger: GGCCTTCACCTGGAGCACCAACCTTCTGGAGCACCG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGAGGTGCGAGCTCCAGTaGAACATCTCCCCACATTTC +
Preference number: 3 (lower is better)
Translates to: LPVSEECWDRESRLFQGLRCELQ*NISPHF
Trigger: GAAATGTGGGGAGATGTTCAACTGGAGCTCGCACCT...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR CAA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACCACGCACAAGAGCTTaGCCACATCCAGCGCGTCGA +
Preference number: 3 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSPRTRA*PHPARR
Trigger: TCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTGG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCAAGGCGCGAGCGGCTGTaGAAGGCCTTCTCGCAGTCG +
Preference number: 3 (lower is better)
Translates to: VSGARPRIQQLIYLLLISRRERL*KAFSQS
Trigger: CGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCCT...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357502.5
ENST00000437275.5
3UTR-3UTR CAA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACCACGCACAAGAGCTTaGCCACATCCAGCGCGTCGA +
Preference number: 3 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQPRTRA*PHPARR
Trigger: TCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTGG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAACGAGGTCTCACCATGTaGTCCAGGCTGGTCCTAGAC +
Preference number: 3 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQRGLTM*SRLVLD
Trigger: GTCTAGGACCAGCCTGGACAACATGGTGAGACCTCG...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR TCA 72 bp TCTAGGAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTaGGTAGCTCAGAAAGCAGCTACTGACACCAAAGCA +
Preference number: 3 (lower is better)
Translates to: SRSQGGPGCFPC*VAQKAATDTKA
Trigger: TGCTTTGGTGTCAGTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTCCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR GCA 72 bp ACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTaGTCCCCAGGGAGAAATTCCTGCCAGCTCTGGGGG +
Preference number: 3 (lower is better)
Translates to: TDTKAHHVSFEV*SPGRNSCQLWG
Trigger: CCCCCAGAGCTGGCAGGAATTTCTCCCTGGGGAGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACACTTTTCTGGCTCACTaGGCGTGGAGGCGTTTTCCC +
Preference number: 3 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYTFLAH*AWRRFP
Trigger: GGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAGT...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTGAGCAGGTGTTTGTaGAACTGGATGGCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYLSRCL*NWMAKG
Trigger: GCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGAGGTGCGAGCTCCAGTaGAACATCTCCCCACATTTC +
Preference number: 3 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVRCELQ*NISPHF
Trigger: GAAATGTGGGGAGATGTTCAACTGGAGCTCGCACCT...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACAGGTGCGAGCTCCAGTaGAACATCTCCCCACATTTC +
Preference number: 3 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYRCELQ*NISPHF
Trigger: GAAATGTGGGGAGATGTTCAACTGGAGCTCGCACCT...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR TCA 72 bp CCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATaGCTCTCAACACTCCTCCTGGAGTGTGGCCCTTCT +
Preference number: 3 (lower is better)
Translates to: PIKENRWQDYLK*LSTLLLECGPS
Trigger: AGAAGGGCCACACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CAA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACACCAGGGTGCTTTCCTaGTTGAGTAGCTCAGAAAGC +
Preference number: 3 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYTRVLS*LSSSES
Trigger: GCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGT...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CAA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCGAGGTCTCACCATGTaGTCCAGGCTGGTCCTAGAC +
Preference number: 3 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRRGLTM*SRLVLD
Trigger: GTCTAGGACCAGCCTGGACAACATGGTGAGACCTCG...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CAA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACACACCCATCCTGATGTaGTGCCCATCTTCCCTGAAT +
Preference number: 3 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYTPILM*CPSSLN
Trigger: ATTCAGGGAAGATGGGCACAACATCAGGATGGGTGT...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CAA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTACTTTTCTGGCTCACTaGGCGTGGAGGCGTTTTCCC +
Preference number: 3 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFATFLAH*AWRRFP
Trigger: GGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAGT...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
3UTR-3UTR CAA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACCAGGGTGCTTTCCTaGTTGAGTAGCTCAGAAAGC +
Preference number: 3 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNTRVLS*LSSSES
Trigger: GCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGT...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CAA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGAAAGATCTTTCCCCTaGTCAACAACTTCCAGGCCC +
Preference number: 3 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQERSFP*STTSRP
Trigger: GGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
3UTR-3UTR CAA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATGTGCTGAGCAGGTGTTaGTTGAACTGGATGGCCAAG +
Preference number: 3 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNVLSRC*LNWMAK
Trigger: CTTGGCCATCCAGTTCAACAAACACCTGCTCAGCAC...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437275.5
3UTR-3UTR CAA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAACCGAGGATACAACAGTaGATATACCTCCTTTTAATT +
Preference number: 3 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQPRIQQ*IYLLLI
Trigger: AATTAAAAGGAGGTATATCAACTGTTGTATCCTCGG...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GGGGGCCTTGGTTCTGCCCTCAGTGGCCTGGACGTTCTTGCGTGTGTCCAGCAAAGCGCCGGTGCAGCGTaGGGGAGGAGCTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: GGLGSALSGLDVLACVQQSAGAA*GRSSGG
Trigger: TCCGCCAGAGCTCCTCCCTCACGCTGCACCGGCGCT...TTGCTGGACACACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR GCA 90 bp GGGGGCCTTGGTTCTGCCCTCAGTGGCCTGGACGTTCTTGCGTGTGTCCAGCAAGCCTTCTCCCGGCTGTaGCAGCGCCGGTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: GGLGSALSGLDVLACVQQAFSRL*QRRCSV
Trigger: CACGCTGCACCGGCGCTGGCACAGCCGGGAGAAGGC...TTGCTGGACACACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR GCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCCAGACCATGGCAGGTaGGGGCGCCCAGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGPDHGR*GRPGRS
Trigger: GCTGCGCCCTGGGCGCCCGCACCTGCCATGGTCTGG...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTCCAGACCATGGCAGGTaGGGGCGCCCAGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGPDHGR*GRPGRS
Trigger: GCTGCGCCCTGGGCGCCCGCACCTGCCATGGTCTGG...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGGGGCCTTGGTTCTGCCCTCAGTGGCCTGGACGTTCTTGCGTGTGTCCAGCAAGGGCAGGGATCTCCATaGCCTCCACGGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGLGSALSGLDVLACVQQGQGSP*PPRQPP
Trigger: GGGAGGCTGCCGTGGAGGCCATGGAGATCCCTGCCC...TTGCTGGACACACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR TCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATCGAGGGGCCGCTCCATaGTGGGCTCCTGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDRGAAP*WAPGPV
Trigger: AACCGGCCCAGGAGCCCATCATGGAGCGGCCCCTCG...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCCTCTGCAGAGCACCTaGCTGGCGCCCCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGPLQST*LAPPRL
Trigger: CAGGCGTGGGGGCGCCAGGCAGGTGCTCTGCAGAGG...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCTCTGGTGCGGCGCGAGCGGCTGTTaGAGGCCTTCTCGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: CLLNWMAKGFPSLCSLWCGASGC*RPSRSR
Trigger: GCGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCC...GCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR TCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTGGTACGCGTGGCAGCTaGAGCCCTTCCCGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGGTRGS*SPSRSR
Trigger: CCGACTGCGGGAAGGGCTTCAGCTGCCACGCGTACC...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGTGCCAGCGCCGGTaGAGCGTGAGGGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGLCQRR*SVREEL
Trigger: GAGCTCCTCCCTCACGCTGCACCGGCGCTGGCACAG...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATCTGTGCCAGCGCCGGTaGAGCGTGAGGGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDLCQRR*SVREEL
Trigger: GAGCTCCTCCCTCACGCTGCACCGGCGCTGGCACAG...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCTGCAGAGCACCTGCCTaGCGCCCCCACGCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNACRAPA*RPHACA
Trigger: GGCGCAGGCGTGGGGGCGCCAGGCAGGTGCTCTGCA...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCCCGTGTGCGTCCTCTaGTGGAGGGTGAGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGPVCVL*WRVRRE
Trigger: CTCGCGCCTCACCCTCCACCAGAGGACGCACACGGG...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTAGACCGCCGACGGTCTaGGGGACCGGCAAGTGGACA +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGRPPTV*GTGKWT
Trigger: TGTCCACTTGCCGGTCCCTCAGACCGTCGGCGGTCT...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000611540.4
CDS-3UTR TCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCCGAGGGGCCGCTCCATaGTGGGCTCCTGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNARGAAP*WAPGPV
Trigger: AACCGGCCCAGGAGCCCATCATGGAGCGGCCCCTCG...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCAGCGCCGGTGCAGCGTaGGGGAGGAGCTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: QAARHVVCAEQVFVELDGSAGAA*GRSSGG
Trigger: TCCGCCAGAGCTCCTCCCTCACGCTGCACCGGCGCT...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR TCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACAGCGCCGGTGCAGCGTaGGGGAGGAGCTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYSAGAA*GRSSGG
Trigger: TCCGCCAGAGCTCCTCCCTCACGCTGCACCGGCGCT...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCCCTCGGGAACGCGTTaGTGGGCGAAGAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGPSGTR*WAKRGH
Trigger: GTGTCCCCTCTTCGCCCAGCAACGCGTTCCCGAGGG...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTCGGGGGCCTTGGTTCTaGCCTCAGTGGCCTGGACGT +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGRGPWF*PQWPGR
Trigger: ACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCCG...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCGGGGGCCTTGGTTCTaGCCTCAGTGGCCTGGACGT +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGRGPWF*PQWPGR
Trigger: ACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCCG...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACACTGTGCCAGCGCCGGTaGAGCGTGAGGGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTLCQRR*SVREEL
Trigger: GAGCTCCTCCCTCACGCTGCACCGGCGCTGGCACAG...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGGCCTTCTCCCGGCTGTaGCAGCGCCGGTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGAFSRL*QRRCSV
Trigger: CACGCTGCACCGGCGCTGGCACAGCCGGGAGAAGGC...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCAGTCCAGCATCCCCTaGACCCAGCAGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGQSSIP*TQQAAR
Trigger: CCTGGCAGCCTGCTGGGTGCAGGGGATGCTGGACTG...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCGGACGTCCCAGACCATaGCAGGTGCGGGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QAARHVVCAEQVFVELDGGRPRP*QVRAPR
Trigger: CCTGGGCGCCCGCACCTGCCATGGTCTGGGACGTCC...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp GGGGGCCTTGGTTCTGCCCTCAGTGGCCTGGACGTTCTTGCGTGTGTCCAGCAACATCCAGCGCGTCGATaGGATCCACGTCCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GGLGSALSGLDVLACVQQHPARR*DPRPSV
Trigger: GACTGAGGGACGTGGATCCCATCGACGCGCTGGATG...TTGCTGGACACACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR CCA 90 bp GCTCCTGGGCCGGTTCTTCTTTGCAAATGCCCTGCTGTTGAGAGGGCACCGCCTGGCCCTGCCCAGCCCTaGTCAGTGAAGAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: APGPVLLCKCPAVERAPPGPAQP*SVKRSF
Trigger: GAAGCTCCTCTTCACTGACCAGGGCTGGGCAGGGCC...AGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR TCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACGGCGCGAGCGGCTGTTaGAGGCCTTCTCGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYGASGC*RPSRSR
Trigger: GCGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCC...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCGGTACGCGTGGCAGCTaGAGCCCTTCCCGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNAGTRGS*SPSRSR
Trigger: CCGACTGCGGGAAGGGCTTCAGCTGCCACGCGTACC...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTGGTAGGCGTGGGAGCTaGAGGCTTTGCCGCACTCGT +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGGRRGS*RLCRTR
Trigger: ACGAGTGCGGCAAAGCCTTCAGCTCCCACGCCTACC...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATGGTAGGCGTGGGAGCTaGAGGCTTTGCCGCACTCGT +
Preference number: 4 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDGRRGS*RLCRTR
Trigger: ACGAGTGCGGCAAAGCCTTCAGCTCCCACGCCTACC...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTAGGCGTGGGAGCTaGAGGCTTTGCCGCACTCGT +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGGRRGS*RLCRTR
Trigger: ACGAGTGCGGCAAAGCCTTCAGCTCCCACGCCTACC...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTGACAGTGGTTCTGGCTaGAGGCTCTGCCGCACTCGC +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGDSGSG*RLCRTR
Trigger: GCGAGTGCGGCAGAGCCTTCAGCCAGAACCACTGTC...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TGGTTCTGCCCTCAGTGGCCTGGACGTTCTTGCGTGTGTCCAGCAAGGGTCCCCTGGCCTGGACGTTCTTaGGTGTGTCCAGCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: WFCPQWPGRSCVCPARVPWPGRS*VCPARV
Trigger: GACCCTTGCTGGACACACGCAAGAACGTCCAGGCCA...GGGGACCCTTGCTGGACACACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR GCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGTGTGCACCCGCAGGTaGATGCTGAGCAGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGVCTRR*MLSSEL
Trigger: CAGCTCGCTGCTCAGCATGCACCTGCGGGTGCACAC...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTGTGTGCACCCGCAGGTaGATGCTGAGCAGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGVCTRR*MLSSEL
Trigger: CAGCTCGCTGCTCAGCATGCACCTGCGGGTGCACAC...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGCTTCCCCTCGCTGTaGAGCCTCTGGTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGGFPSL*SLWCSV
Trigger: CACTGAGCACCAGAGGCTGCACAGCGAGGGGAAGCC...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATCCACGCGCTCACAGCTaGACGATCACACGCACGGAG +
Preference number: 4 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDPRAHS*TITRTE
Trigger: CTCCGTGCGTGTGATCGTGCAGCTGTGAGCGCGTGG...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACAAGCCCAGGGTGGCCCTaGCCAGCCCTGGTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTSPGWP*PALVSE
Trigger: TTCACTGACCAGGGCTGGGCAGGGCCACCCTGGGCT...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACAGTCTCGCGGGGGCCTTaGTTCTGCCCTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTVSRGP*FCPQWP
Trigger: AGGCCACTGAGGGCAGAACCAAGGCCCCCGCGAGAC...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTCGCTGCCGGCGCACCTaGGGGAACTTTTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGRCRRT*GNFSGS
Trigger: TGAGCCAGAAAAGTTCCCCCAGGTGCGCCGGCAGCG...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCGCTGCCGGCGCACCTaGGGGAACTTTTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LSRCLLNWMAKGFPSLCSRCRRT*GNFSGS
Trigger: TGAGCCAGAAAAGTTCCCCCAGGTGCGCCGGCAGCG...GCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCACTGGTCCTAGACTCCTaGGCTCAAGTGATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPLVLDS*AQVIPL
Trigger: CAAGGGGATCACTTGAGCCCAGGAGTCTAGGACCAG...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGGGGCAGGGATCTCCATaGCCTCCACGGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LPVSEECWDRESRLFQGLGQGSP*PPRQPP
Trigger: GGGAGGCTGCCGTGGAGGCCATGGAGATCCCTGCCC...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACGGCGCGAGCGGCTGTTaGAGGCCTTCTCGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDGASGC*RPSRSR
Trigger: GCGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCC...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGACTTCCCTCTGCATaGTCCATGGCTCCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGGLPSA*SMAPRL
Trigger: GAGGCGAGGAGCCATGGAGCATGCAGAGGGAAGTCC...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAACCAGACCATGGCAGGTaGGGGCGCCCAGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQPDHGR*GRPGRS
Trigger: GCTGCGCCCTGGGCGCCCGCACCTGCCATGGTCTGG...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACCCCTCGGGAACGCGTTaGTGGGCGAAGAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYPSGTR*WAKRGH
Trigger: GTGTCCCCTCTTCGCCCAGCAACGCGTTCCCGAGGG...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCCGGGGGCCTTGGTTCTaGCCTCAGTGGCCTGGACGT +
Preference number: 4 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNARGPWF*PQWPGR
Trigger: ACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCCG...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACAGTGTGCACCCGCAGGTaGATGCTGAGCAGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTVCTRR*MLSSEL
Trigger: CAGCTCGCTGCTCAGCATGCACCTGCGGGTGCACAC...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCACTGTGGATCTTCTCATaGACGGTGAGGGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPLWIFS*TVRDEW
Trigger: CCACTCATCCCTCACCGTGCATGAGAAGATCCACAG...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCAGTCCAGCATCCCCTaGACCCAGCAGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGQSSIP*TQQAAR
Trigger: CCTGGCAGCCTGCTGGGTGCAGGGGATGCTGGACTG...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp TGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCTCTGGTGCGGAGGCACCCTGGCATaGAGACCTGATGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: CLLNWMAKGFPSLCSLWCGGTLA*RPDGGD
Trigger: ATCACCCCCATCAGGTCTGCATGCCAGGGTGCCTCC...GCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCATAGTGAGAAGCCCTaGAGGGCAGCCTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGHSEKP*RAASPA
Trigger: GGCTGGTGAGGCTGCCCTGCAGGGCTTCTCACTATG...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACACCCCTCTCCAGTGGGTaGTGGGAGGGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTPLSSG*WEGLLL
Trigger: CAGAAGAAGCCCCTCCCAGCACCCACTGGAGAGGGG...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCAAACTCACCGATTCCTTaGACCTGGCTTCGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPNSPIP*TWLRED
Trigger: GTCTTCCCGAAGCCAGGTCCAAGGAATCGGTGAGTT...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357502.5
CDS-3UTR CCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCATGCAGAGCACCTGCCTaGCGCCCCCACGCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSCRAPA*RPHACA
Trigger: GGCGCAGGCGTGGGGGCGCCAGGCAGGTGCTCTGCA...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTGTGTGGATGCGGTGGTaGCGTGTGAGGTGTGTACGC +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGVWMRW*RVRCVR
Trigger: GCGTACACACCTCACACGCCACCACCGCATCCACAC...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATCATCCAGCGCGTCGATaGGATCCACGTCCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDHPARR*DPRPSV
Trigger: GACTGAGGGACGTGGATCCCATCGACGCGCTGGATG...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTAGAGGAGGCACCCTaGCATGCAGACCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGLEEAP*HADLMG
Trigger: CCCCATCAGGTCTGCATGCCAGGGTGCCTCCTCTAG...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATACTCCTCCTGGAGTGTaGCCCTTCTGGGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDTPPGV*PFWGGD
Trigger: GTCACCTCCCCAGAAGGGCCACACTCCAGGAGGAGT...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCAGTGATCCCCTTGCCTTaGCCTCCCACAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPVIPLP*PPTVLR
Trigger: TCTTAACACTGTGGGAGGCCAAGGCAAGGGGATCAC...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR TCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACGAGGGGCCGCTCCATaGTGGGCTCCTGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSRGAAP*WAPGPV
Trigger: AACCGGCCCAGGAGCCCATCATGGAGCGGCCCCTCG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGAGCGCCGGTGCAGCGTaGGGGAGGAGCTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVSAGAA*GRSSGG
Trigger: TCCGCCAGAGCTCCTCCCTCACGCTGCACCGGCGCT...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCGACAGTGGTTCTGGCTaGAGGCTCTGCCGCACTCGC +
Preference number: 4 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNADSGSG*RLCRTR
Trigger: GCGAGTGCGGCAGAGCCTTCAGCCAGAACCACTGTC...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGGACAGTGGTTCTGGCTaGAGGCTCTGCCGCACTCGC +
Preference number: 4 (lower is better)
Translates to: LPVSEECWDRESRLFQGLDSGSG*RLCRTR
Trigger: GCGAGTGCGGCAGAGCCTTCAGCCAGAACCACTGTC...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACCCTCTGCAGAGCACCTaGCTGGCGCCCCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHPLQST*LAPPRL
Trigger: CAGGCGTGGGGGCGCCAGGCAGGTGCTCTGCAGAGG...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACGCCTTCTCCCGGCTGTaGCAGCGCCGGTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHAFSRL*QRRCSV
Trigger: CACGCTGCACCGGCGCTGGCACAGCCGGGAGAAGGC...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCGGCTTCCCCTCGCTGTaGAGCCTCTGGTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QAARHVVCAEQVFVELDGGFPSL*SLWCSV
Trigger: CACTGAGCACCAGAGGCTGCACAGCGAGGGGAAGCC...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAACAGTCCAGCATCCCCTaGACCCAGCAGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: AARHVVCAEQVFVELDGQQSSIP*TQQAAR
Trigger: CCTGGCAGCCTGCTGGGTGCAGGGGATGCTGGACTG...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACACATAGTGAGAAGCCCTaGAGGGCAGCCTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTHSEKP*RAASPA
Trigger: GGCTGGTGAGGCTGCCCTGCAGGGCTTCTCACTATG...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACCCCCTCTCCAGTGGGTaGTGGGAGGGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYPLSSG*WEGLLL
Trigger: CAGAAGAAGCCCCTCCCAGCACCCACTGGAGAGGGG...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCCGATTCCTTGGACCTaGCTTCGGGAAGACCCCAAC +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGPIPWT*LREDPN
Trigger: GTTGGGGTCTTCCCGAAGCCAGGTCCAAGGAATCGG...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000611540.4
CDS-3UTR CCA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCAATGAGAGATCACATCTaGCTTGTGCAGTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPMRDHI*LVQWRS
Trigger: GGACCTCCACTGCACAAGCCAGATGTGATCTCTCAT...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGCTGGACAGGGCCCTCTaGGGACTTCCCTCTGCATGC +
Preference number: 4 (lower is better)
Translates to: LPVSEECWDRESRLFQGLLDRAL*GLPSAC
Trigger: GCATGCAGAGGGAAGTCCCCAGAGGGCCCTGTCCAG...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTTGCAGAGCACCTGCCTaGCGCCCCCACGCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSCRAPA*RPHACA
Trigger: GGCGCAGGCGTGGGGGCGCCAGGCAGGTGCTCTGCA...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACGGACGTCCCAGACCATaGCAGGTGCGGGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYGRPRP*QVRAPR
Trigger: CCTGGGCGCCCGCACCTGCCATGGTCTGGGACGTCC...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACACTGCCCTCAGTGGCCTaGACGTTCTTGCGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTLPSVA*TFLRVS
Trigger: GGACACACGCAAGAACGTCCAGGCCACTGAGGGCAG...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCTGGTTCTGCCCTCAGTaGCCTGGACGTTCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: LSRCLLNWMAKGFPSLCSWFCPQ*PGRSCV
Trigger: CACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCA...GCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACACTGGCTCACTTGGCGTaGAGGCGTTTTCCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTLAHLA*RRFPLH
Trigger: GTGCAGGGGAAAACGCCTCCACGCCAAGTGAGCCAG...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGCTTGTCCCCGCTGTaGATCTTCTCATGCACGGTG +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGGLSPL*IFSCTV
Trigger: CACCGTGCATGAGAAGATCCACAGCGGGGACAAGCC...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GCTCCTGGGCCGGTTCTTCTTTGCAAATGCCCTGCTGTTGAGAGGGCACCGCCTACACCTGGAGGAAGGTaGTCTGGATCTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: APGPVLLCKCPAVERAPPTPGGR*SGSRSQ
Trigger: CTGGCTCCTAGATCCAGACCACCTTCCTCCAGGTGT...AGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR CCA 90 bp CTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCAAGGCTCCCACACCTaGAGGAAGGTGGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: LSRCLLNWMAKGFPSLCSQGSHT*RKVVWI
Trigger: GATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTG...GCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACTGGAGCCCGTCTCCCTaGGCTTCAGCTTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYWSPSP*ASASPL
Trigger: GAGAGGGGAAGCTGAAGCCCAGGGAGACGGGCTCCA...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCTGGAGCCCGTCTCCCTaGGCTTCAGCTTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: QAARHVVCAEQVFVELDGWSPSP*ASASPL
Trigger: GAGAGGGGAAGCTGAAGCCCAGGGAGACGGGCTCCA...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR CCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCCATGTGGGACCACCATaGAGCCCGTCTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNAHVGPP*SPSPWA
Trigger: AGCCCAGGGAGACGGGCTCCATGGTGGTCCCACATG...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACCAAATGCCCTGCTGTTaGGAGGGCACCGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYQMPCC*EGTAFS
Trigger: GCTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTG...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACGAGGGGCCGCTCCATaGTGGGCTCCTGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQRGAAP*WAPGPV
Trigger: AACCGGCCCAGGAGCCCATCATGGAGCGGCCCCTCG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTAGCGCCGGTGCAGCGTaGGGGAGGAGCTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSSAGAA*GRSSGG
Trigger: TCCGCCAGAGCTCCTCCCTCACGCTGCACCGGCGCT...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCATATGGAGGAAACTCCTaGTTAAAGCCGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPYGGNS*LKPCQE
Trigger: CTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATA...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357502.5
ENST00000437275.5
CDS-3UTR TCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGATCCAGGGCAGGCCCTaGAGAGCGAGTACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPVSEECWDRESRLFQGLIQGRP*RASTAP
Trigger: AGGAGCAGTACTCGCTCTTCAGGGCCTGCCCTGGAT...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400451.7
ENST00000437275.5
CDS-3UTR TCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCCCAGCCCTGGTCAGTaGAGAGGAGCTTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGPSPGQ*RGASRH
Trigger: GTGTCTGGAAGCTCCTCTTCACTGACCAGGGCTGGG...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR TCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATTGTGACCTGGGCTGGTaGCTGGTGCTACATAGTGAG +
Preference number: 4 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDCDLGW*LVLHSE
Trigger: CTCACTATGTAGCACCAGTCACCAGCCCAGGTCACA...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACCCTCTGCAGAGCACCTaGCTGGCGCCCCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNPLQST*LAPPRL
Trigger: CAGGCGTGGGGGCGCCAGGCAGGTGCTCTGCAGAGG...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGCTGTGCCAGCGCCGGTaGAGCGTGAGGGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVLCQRR*SVREEL
Trigger: GAGCTCCTCCCTCACGCTGCACCGGCGCTGGCACAG...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCTGCACCCAGCAGGCTaGCAGGCACGTAGTATGTGC +
Preference number: 4 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGLHPAG*QARSMC
Trigger: GCACATACTACGTGCCTGGCAGCCTGCTGGGTGCAG...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTCACGCACAAGAGCTTTaGCACATCCAGCGCGTCGAT +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGHAQEL*HIQRVD
Trigger: ATCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTG...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATCACGCACAAGAGCTTTaGCACATCCAGCGCGTCGAT +
Preference number: 4 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDHAQEL*HIQRVD
Trigger: ATCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTG...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GGGGGCCTTGGTTCTGCCCTCAGTGGCCTGGACGTTCTTGCGTGTGTCCAGCAACCCATCCTGATGTTGTaGCCATCTTCCCTGAATGCA +
Preference number: 4 (lower is better)
Translates to: GGLGSALSGLDVLACVQQPILML*PSSLNA
Trigger: TGCATTCAGGGAAGATGGGCACAACATCAGGATGGG...TTGCTGGACACACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR CCA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCTTCAGCTCCCATTCTaGACAGGGCCCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QAARHVVCAEQVFVELDGLQLPF*TGPSGD
Trigger: GTCCCCAGAGGGCCCTGTCCAGAATGGGAGCTGAAG...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACGGACGTCCCAGACCATaGCAGGTGCGGGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNGRPRP*QVRAPR
Trigger: CCTGGGCGCCCGCACCTGCCATGGTCTGGGACGTCC...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGGACGTCCCAGACCATaGCAGGTGCGGGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQGRPRP*QVRAPR
Trigger: CCTGGGCGCCCGCACCTGCCATGGTCTGGGACGTCC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCTGCCCTCAGTGGCCTaGACGTTCTTGCGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QAARHVVCAEQVFVELDGLPSVA*TFLRVS
Trigger: GGACACACGCAAGAACGTCCAGGCCACTGAGGGCAG...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATCTTTTCTGGCTCACTTaGCGTGGAGGCGTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDLFWLT*RGGVFP
Trigger: GGGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAG...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCTTTTCTGGCTCACTTaGCGTGGAGGCGTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LSRCLLNWMAKGFPSLCSLFWLT*RGGVFP
Trigger: GGGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAG...GCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCGTGTGGATGCGGTGGTaGCGTGTGAGGTGTGTACGC +
Preference number: 4 (lower is better)
Translates to: QAARHVVCAEQVFVELDGVWMRW*RVRCVR
Trigger: GCGTACACACCTCACACGCCACCACCGCATCCACAC...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGGTGTGCGTCCTCTGGTaGAGGGTGAGGCGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVVCVLW*RVRRER
Trigger: CCGCTCGCGCCTCACCCTCCACCAGAGGACGCACAC...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCTAGAGGAGGCACCCTaGCATGCAGACCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGLEEAP*HADLMG
Trigger: CCCCATCAGGTCTGCATGCCAGGGTGCCTCCTCTAG...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGACTCCTCCTGGAGTGTaGCCCTTCTGGGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGTPPGV*PFWGGD
Trigger: GTCACCTCCCCAGAAGGGCCACACTCCAGGAGGAGT...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACACTCCTCCTGGAGTGTaGCCCTTCTGGGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYTPPGV*PFWGGD
Trigger: GTCACCTCCCCAGAAGGGCCACACTCCAGGAGGAGT...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGGGGCAGGGATCTCCATaGCCTCCACGGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVGQGSP*PPRQPP
Trigger: GGGAGGCTGCCGTGGAGGCCATGGAGATCCCTGCCC...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTGCTTCTTCTGTGACCTaGGCTGGTGACTGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGASSVT*AGDWCY
Trigger: GTAGCACCAGTCACCAGCCCAGGTCACAGAAGAAGC...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACTGGAGCCCGTCTCCCTaGGCTTCAGCTTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDWSPSP*ASASPL
Trigger: GAGAGGGGAAGCTGAAGCCCAGGGAGACGGGCTCCA...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR CAA 72 bp CTCCTGGGCCGGTTCTTCTTTGCAAATGCCCTGCTGTaGAGAGGGCACCGCCTTCAGCTCCCATTCTGGACA +
Preference number: 4 (lower is better)
Translates to: LLGRFFFANALL*RGHRLQLPFWT
Trigger: TGTCCAGAATGGGAGCTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR TCA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACAGACCGCCGACGGTCTaGGGGACCGGCAAGTGGACA +
Preference number: 4 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHRPPTV*GTGKWT
Trigger: TGTCCACTTGCCGGTCCCTCAGACCGTCGGCGGTCT...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000611540.4
CDS-3UTR TCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACGGCGCGAGCGGCTGTTaGAGGCCTTCTCGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNGASGC*RPSRSR
Trigger: GCGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCC...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGGCGCGAGCGGCTGTTaGAGGCCTTCTCGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQGASGC*RPSRSR
Trigger: GCGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGGTACGCGTGGCAGCTaGAGCCCTTCCCGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQGTRGS*SPSRSR
Trigger: CCGACTGCGGGAAGGGCTTCAGCTGCCACGCGTACC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTGGTGCGAGCTCCAGTTaGACATCTCCCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGGASSS*TSPHIS
Trigger: AGAAATGTGGGGAGATGTTCAACTGGAGCTCGCACC...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTCTGTCTTCCTGTCTCTaGAGAGTGTTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGLSSCL*RVLGQG
Trigger: TCCCTGTCCCAACACTCTTCAGAGACAGGAAGACAG...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATCTCCCACAAAAGGACTaGGACTGCCACAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDLPQKD*DCHKEQ
Trigger: CTGCTCTTTGTGGCAGTCGCAGTCCTTTTGTGGGAG...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000611540.4
CDS-3UTR GCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCACCAGACCATGGCAGGTaGGGGCGCCCAGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VSGARPRIQQLIYLLLISPDHGR*GRPGRS
Trigger: GCTGCGCCCTGGGCGCCCGCACCTGCCATGGTCTGG...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAACGGGGGCCTTGGTTCTaGCCTCAGTGGCCTGGACGT +
Preference number: 4 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQRGPWF*PQWPGR
Trigger: ACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCCG...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACCAGTCCAGCATCCCCTaGACCCAGCAGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHQSSIP*TQQAAR
Trigger: CCTGGCAGCCTGCTGGGTGCAGGGGATGCTGGACTG...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATAATGATGCTGGGCCGTaGTGTGACAGCTGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDNDAGP*CDSCGN
Trigger: ATTCCCACAGCTGTCACAGCACGGCCCAGCATCATT...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACCCGATTCCTTGGACCTaGCTTCGGGAAGACCCCAAC +
Preference number: 4 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYPIPWT*LREDPN
Trigger: GTTGGGGTCTTCCCGAAGCCAGGTCCAAGGAATCGG...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000611540.4
CDS-3UTR CCA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAACTGCCCTCAGTGGCCTaGACGTTCTTGCGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: AARHVVCAEQVFVELDGQLPSVA*TFLRVS
Trigger: GGACACACGCAAGAACGTCCAGGCCACTGAGGGCAG...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGGTCTCGCGGGGGCCTTaGTTCTGCCCTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVVSRGP*FCPQWP
Trigger: AGGCCACTGAGGGCAGAACCAAGGCCCCCGCGAGAC...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACGTCTCGCGGGGGCCTTaGTTCTGCCCTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHVSRGP*FCPQWP
Trigger: AGGCCACTGAGGGCAGAACCAAGGCCCCCGCGAGAC...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACGTCTCGCGGGGGCCTTaGTTCTGCCCTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYVSRGP*FCPQWP
Trigger: AGGCCACTGAGGGCAGAACCAAGGCCCCCGCGAGAC...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCCTGGGGGAACTTTTCTaGCTCACTTGGCGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNALGELF*LTWRGG
Trigger: GCCTCCACGCCAAGTGAGCCAGAAAAGTTCCCCCAG...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACGTGTGGATGCGGTGGTaGCGTGTGAGGTGTGTACGC +
Preference number: 4 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDVWMRW*RVRCVR
Trigger: GCGTACACACCTCACACGCCACCACCGCATCCACAC...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCGGCTTGTCCCCGCTGTaGATCTTCTCATGCACGGTG +
Preference number: 4 (lower is better)
Translates to: QAARHVVCAEQVFVELDGGLSPL*IFSCTV
Trigger: CACCGTGCATGAGAAGATCCACAGCGGGGACAAGCC...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACGTGTGCGTCCTCTGGTaGAGGGTGAGGCGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNVCVLW*RVRRER
Trigger: CCGCTCGCGCCTCACCCTCCACCAGAGGACGCACAC...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTCCCGTGTGCGTCCTCTaGTGGAGGGTGAGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSPVCVL*WRVRRE
Trigger: CTCGCGCCTCACCCTCCACCAGAGGACGCACACGGG...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTGTGATCCCCTTGCCTTaGCCTCCCACAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGVIPLP*PPTVLR
Trigger: TCTTAACACTGTGGGAGGCCAAGGCAAGGGGATCAC...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCTCTGGTGCGTGATCCCCTTGCCTTaGCCTCCCACAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: CLLNWMAKGFPSLCSLWCVIPLP*PPTVLR
Trigger: TCTTAACACTGTGGGAGGCCAAGGCAAGGGGATCAC...GCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR TCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAAGACCGCCGACGGTCTaGGGGACCGGCAAGTGGACA +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQRPPTV*GTGKWT
Trigger: TGTCCACTTGCCGGTCCCTCAGACCGTCGGCGGTCT...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000611540.4
CDS-3UTR TCA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGAAAGAGCAGGATCCTaGGAGGAAAGAGCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: AARHVVCAEQVFVELDGQERAGS*EERAAL
Trigger: GAGCGCGGCTCTTTCCTCTCAGGATCCTGCTCTTTC...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357502.5
CDS-3UTR TCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGGGTAGGCGTGGGAGCTaGAGGCTTTGCCGCACTCGT +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVGRRGS*RLCRTR
Trigger: ACGAGTGCGGCAAAGCCTTCAGCTCCCACGCCTACC...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAAGGTAGGCGTGGGAGCTaGAGGCTTTGCCGCACTCGT +
Preference number: 4 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQGRRGS*RLCRTR
Trigger: ACGAGTGCGGCAAAGCCTTCAGCTCCCACGCCTACC...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCTCTGGTGCGGGTGCTTTCCTTGTTaGGTAGCTCAGAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CLLNWMAKGFPSLCSLWCGCFPC*VAQKAA
Trigger: AGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCC...GCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR TCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACAGCCCTTCTGGGGAGGTaGCTGACTTTAACTAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTALLGR*LTLTRG
Trigger: TCCTCTAGTTAAAGTCAGTCACCTCCCCAGAAGGGC...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACAGGGCCGGTTCTTCTTTaGAAATGCCCTGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTGPVLL*KCPAVE
Trigger: CTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCC...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTCCTCTGCAGAGCACCTaGCTGGCGCCCCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFAPLQST*LAPPRL
Trigger: CAGGCGTGGGGGCGCCAGGCAGGTGCTCTGCAGAGG...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACCCTCGGGAACGCGTTaGTGGGCGAAGAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQPSGTR*WAKRGH
Trigger: GTGTCCCCTCTTCGCCCAGCAACGCGTTCCCGAGGG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACCGGGGGCCTTGGTTCTaGCCTCAGTGGCCTGGACGT +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNRGPWF*PQWPGR
Trigger: ACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCCG...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGGGCTTCCCCTCGCTGTaGAGCCTCTGGTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVGFPSL*SLWCSV
Trigger: CACTGAGCACCAGAGGCTGCACAGCGAGGGGAAGCC...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCACGCACAAGAGCTTTaGCACATCCAGCGCGTCGAT +
Preference number: 4 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGHAQEL*HIQRVD
Trigger: ATCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTG...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTCCAGGCTCAGCCCCATaGTCGGCGCACTCACGCCCC +
Preference number: 4 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFAPGSAP*SAHSRP
Trigger: GGGGCGTGAGTGCGCCGAGCATGGGGCTGAGCCTGG...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403682.7
CDS-3UTR GCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGCCACGCGCTCACAGCTaGACGATCACACGCACGGAG +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVPRAHS*TITRTE
Trigger: CTCCGTGCGTGTGATCGTGCAGCTGTGAGCGCGTGG...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACCCCTCTCCAGTGGGTaGTGGGAGGGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSPLSSG*WEGLLL
Trigger: CAGAAGAAGCCCCTCCCAGCACCCACTGGAGAGGGG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGTGCAGAGCACCTGCCTaGCGCCCCCACGCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKCRAPA*RPHACA
Trigger: GGCGCAGGCGTGGGGGCGCCAGGCAGGTGCTCTGCA...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAATGGTTCTGCCCTCAGTaGCCTGGACGTTCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: AARHVVCAEQVFVELDGQWFCPQ*PGRSCV
Trigger: CACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCA...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACGCTGCCGGCGCACCTaGGGGAACTTTTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSRCRRT*GNFSGS
Trigger: TGAGCCAGAAAAGTTCCCCCAGGTGCGCCGGCAGCG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGACACCTGGAGGAAGGTaGTCTGGATCTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGTPGGR*SGSRSQ
Trigger: CTGGCTCCTAGATCCAGACCACCTTCCTCCAGGTGT...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCACACCTGGAGGAAGGTaGTCTGGATCTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNATPGGR*SGSRSQ
Trigger: CTGGCTCCTAGATCCAGACCACCTTCCTCCAGGTGT...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACCAAGGCTCCCACACCTaGAGGAAGGTGGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDQGSHT*RKVVWI
Trigger: GATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTG...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATTACAGGTGTGAGCCATaGCACCCAACGATATCCCTT +
Preference number: 4 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDYRCEP*HPTISL
Trigger: AAGGGATATCGTTGGGTGCCATGGCTCACACCTGTA...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTTACAGGTGTGAGCCATaGCACCCAACGATATCCCTT +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGYRCEP*HPTISL
Trigger: AAGGGATATCGTTGGGTGCCATGGCTCACACCTGTA...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCTGGTCCTAGACTCCTaGGCTCAAGTGATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGLVLDS*AQVIPL
Trigger: CAAGGGGATCACTTGAGCCCAGGAGTCTAGGACCAG...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACAACCTGGGCTGGTGACTaGTGCTACATAGTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTTWAGD*CYIVRS
Trigger: GCTTCTCACTATGTAGCACCAGTCACCAGCCCAGGT...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAACATGTGGGACCACCATaGAGCCCGTCTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQHVGPP*SPSPWA
Trigger: AGCCCAGGGAGACGGGCTCCATGGTGGTCCCACATG...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACCATGTGGGACCACCATaGAGCCCGTCTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHHVGPP*SPSPWA
Trigger: AGCCCAGGGAGACGGGCTCCATGGTGGTCCCACATG...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGGTCTCTGAAGAGTGTTaGGACAGGGAGAGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LPVSEECWDRESRLFQGLVSEEC*DRESRL
Trigger: AAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGAC...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR CAA 72 bp AGTGAAGAGGAGCTTCCAGACACACCCATCCTGATGTaGTGCCCATCTTCCCTGAATGCACTGGGCACCTGC +
Preference number: 4 (lower is better)
Translates to: SEEELPDTPILM*CPSSLNALGTC
Trigger: GCAGGTGCCCAGTGCATTCAGGGAAGATGGGCACAACATCAGGATGGGTGTGTCTGGAAGCTCCTCTTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGACAGTGGTTCTGGCTaGAGGCTCTGCCGCACTCGC +
Preference number: 4 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSDSGSG*RLCRTR
Trigger: GCGAGTGCGGCAGAGCCTTCAGCCAGAACCACTGTC...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCGGTGCGAGCTCCAGTTaGACATCTCCCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: QAARHVVCAEQVFVELDGGASSS*TSPHIS
Trigger: AGAAATGTGGGGAGATGTTCAACTGGAGCTCGCACC...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR TCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACGCCCTTCTGGGGAGGTaGCTGACTTTAACTAGAGGA +
Preference number: 4 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYALLGR*LTLTRG
Trigger: TCCTCTAGTTAAAGTCAGTCACCTCCCCAGAAGGGC...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTCAAGACTACCTCAAATaGCTCTCAACACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGQDYLK*LSTLLL
Trigger: CAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTG...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCTCTGGTGCCAAGACTACCTCAAATaGCTCTCAACACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: CLLNWMAKGFPSLCSLWCQDYLK*LSTLLL
Trigger: CAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTG...GCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR TCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCCCAGCCCTGGTCAGTaGAGAGGAGCTTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYPSPGQ*RGASRH
Trigger: GTGTCTGGAAGCTCCTCTTCACTGACCAGGGCTGGG...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGTGTGCACCCGCAGGTaGATGCTGAGCAGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQVCTRR*MLSSEL
Trigger: CAGCTCGCTGCTCAGCATGCACCTGCGGGTGCACAC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACGTGTGCACCCGCAGGTaGATGCTGAGCAGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNVCTRR*MLSSEL
Trigger: CAGCTCGCTGCTCAGCATGCACCTGCGGGTGCACAC...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCTGTGGATCTTCTCATaGACGGTGAGGGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGLWIFS*TVRDEW
Trigger: CCACTCATCCCTCACCGTGCATGAGAAGATCCACAG...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACCTGTGGATCTTCTCATaGACGGTGAGGGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYLWIFS*TVRDEW
Trigger: CCACTCATCCCTCACCGTGCATGAGAAGATCCACAG...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACTGCACCCAGCAGGCTaGCAGGCACGTAGTATGTGC +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSLHPAG*QARSMC
Trigger: GCACATACTACGTGCCTGGCAGCCTGCTGGGTGCAG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGAATGATGCTGGGCCGTaGTGTGACAGCTGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LPVSEECWDRESRLFQGLNDAGP*CDSCGN
Trigger: ATTCCCACAGCTGTCACAGCACGGCCCAGCATCATT...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAACATAGTGAGAAGCCCTaGAGGGCAGCCTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQHSEKP*RAASPA
Trigger: GGCTGGTGAGGCTGCCCTGCAGGGCTTCTCACTATG...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCTGGGCTGGTGACTGGTaGTACATAGTGAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNAWAGDW*YIVRSP
Trigger: AGGGCTTCTCACTATGTAGCACCAGTCACCAGCCCA...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACTGGGCTGGTGACTGGTaGTACATAGTGAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYWAGDW*YIVRSP
Trigger: AGGGCTTCTCACTATGTAGCACCAGTCACCAGCCCA...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGCTTCAGCTCCCATTCTaGACAGGGCCCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVLQLPF*TGPSGD
Trigger: GTCCCCAGAGGGCCCTGTCCAGAATGGGAGCTGAAG...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCTCCATGATGGGCTCCTaGGCCGGTTCTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNASMMGS*AGSSLQ
Trigger: TTGCAAAGAAGAACCGGCCCAGGAGCCCATCATGGA...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGGACGTCCCAGACCATaGCAGGTGCGGGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKGRPRP*QVRAPR
Trigger: CCTGGGCGCCCGCACCTGCCATGGTCTGGGACGTCC...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAACTGCCCTCAGTGGCCTaGACGTTCTTGCGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQLPSVA*TFLRVS
Trigger: GGACACACGCAAGAACGTCCAGGCCACTGAGGGCAG...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACTGGCTCACTTGGCGTaGAGGCGTTTTCCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSLAHLA*RRFPLH
Trigger: GTGCAGGGGAAAACGCCTCCACGCCAAGTGAGCCAG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTGGCTCACTTGGCGTaGAGGCGTTTTCCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYLAHLA*RRFPLH
Trigger: GTGCAGGGGAAAACGCCTCCACGCCAAGTGAGCCAG...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAGTGTGGATGCGGTGGTaGCGTGTGAGGTGTGTACGC +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSVWMRW*RVRCVR
Trigger: GCGTACACACCTCACACGCCACCACCGCATCCACAC...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCCCGTGTGCGTCCTCTaGTGGAGGGTGAGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRPVCVL*WRVRRE
Trigger: CTCGCGCCTCACCCTCCACCAGAGGACGCACACGGG...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCATCCAGCGCGTCGATaGGATCCACGTCCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYHPARR*DPRPSV
Trigger: GACTGAGGGACGTGGATCCCATCGACGCGCTGGATG...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGCTAGAGGAGGCACCCTaGCATGCAGACCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVLEEAP*HADLMG
Trigger: CCCCATCAGGTCTGCATGCCAGGGTGCCTCCTCTAG...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACCTGGTCCTAGACTCCTaGGCTCAAGTGATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDLVLDS*AQVIPL
Trigger: CAAGGGGATCACTTGAGCCCAGGAGTCTAGGACCAG...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTTCACTAGGGGCTAAATaGCAAGAGGTGATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGSLGAK*QEVMLA
Trigger: TGCCAACATCACCTCTTGCCATTTAGCCCCTAGTGA...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTTCACTAGGGGCTAAATaGCAAGAGGTGATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGSLGAK*QEVMLA
Trigger: TGCCAACATCACCTCTTGCCATTTAGCCCCTAGTGA...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGGCCCTGCCCAGCCCTaGTCAGTGAAGAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSGPAQP*SVKRSF
Trigger: GAAGCTCCTCTTCACTGACCAGGGCTGGGCAGGGCC...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGACCTGGGCTGGTGACTaGTGCTACATAGTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LPVSEECWDRESRLFQGLTWAGD*CYIVRS
Trigger: GCTTCTCACTATGTAGCACCAGTCACCAGCCCAGGT...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp CCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTCTGGATTCAGAAAGCAGCTACTaGCACCAAAGCACATCATGT +
Preference number: 4 (lower is better)
Translates to: PDGGDKARLPHLEEGGLDSESSY*HQSTSC
Trigger: ACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGA...ATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAATCCAGGGCAGGCCCTaGAGAGCGAGTACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQIQGRP*RASTAP
Trigger: AGGAGCAGTACTCGCTCTTCAGGGCCTGCCCTGGAT...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
CDS-3UTR TCA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTTGTGCCCATCTTCCCTaGATGCACTGGGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSCAHLP*MHWAPA
Trigger: GGCAGGTGCCCAGTGCATTCAGGGAAGATGGGCACA...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAACTGTCTTCCTGTCTCTaGAGAGTGTTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: AARHVVCAEQVFVELDGQLSSCL*RVLGQG
Trigger: TCCCTGTCCCAACACTCTTCAGAGACAGGAAGACAG...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR GCA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTCCCTCGGGAACGCGTTaGTGGGCGAAGAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFAPSGTR*WAKRGH
Trigger: GTGTCCCCTCTTCGCCCAGCAACGCGTTCCCGAGGG...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTGGCCTGGACGTTCTTaGGTGTGTCCAGCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHWPGRS*VCPARV
Trigger: GACCCTTGCTGGACACACGCAAGAACGTCCAGGCCA...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCATGGCCTGGACGTTCTTaGGTGTGTCCAGCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSWPGRS*VCPARV
Trigger: GACCCTTGCTGGACACACGCAAGAACGTCCAGGCCA...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACCTGCACCCAGCAGGCTaGCAGGCACGTAGTATGTGC +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNLHPAG*QARSMC
Trigger: GCACATACTACGTGCCTGGCAGCCTGCTGGGTGCAG...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGACCAGGCTCAGCCCCATaGTCGGCGCACTCACGCCCC +
Preference number: 4 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGPGSAP*SAHSRP
Trigger: GGGGCGTGAGTGCGCCGAGCATGGGGCTGAGCCTGG...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400451.7
CDS-3UTR GCA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAATGCACTGGGCACCTaGCTGGTAGCTCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDNALGT*LVAPNF
Trigger: GAAATTGGGAGCTACCAGGCAGGTGCCCAGTGCATT...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCAAGCCCAGGGTGGCCCTaGCCAGCCCTGGTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: VSGARPRIQQLIYLLLISSPGWP*PALVSE
Trigger: TTCACTGACCAGGGCTGGGCAGGGCCACCCTGGGCT...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACTTCAGCTCCCATTCTaGACAGGGCCCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQLQLPF*TGPSGD
Trigger: GTCCCCAGAGGGCCCTGTCCAGAATGGGAGCTGAAG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACTGGTTCTGCCCTCAGTaGCCTGGACGTTCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYWFCPQ*PGRSCV
Trigger: CACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCA...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACGGCTTGTCCCCGCTGTaGATCTTCTCATGCACGGTG +
Preference number: 4 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHGLSPL*IFSCTV
Trigger: CACCGTGCATGAGAAGATCCACAGCGGGGACAAGCC...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGTGTGCGTCCTCTGGTaGAGGGTGAGGCGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKVCVLW*RVRRER
Trigger: CCGCTCGCGCCTCACCCTCCACCAGAGGACGCACAC...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGCCCGTGTGCGTCCTCTaGTGGAGGGTGAGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKPVCVL*WRVRRE
Trigger: CTCGCGCCTCACCCTCCACCAGAGGACGCACACGGG...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAAGGTGTTTGTTGAACTaGATGGCCAAGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: AARHVVCAEQVFVELDGQRCLLN*MAKGFP
Trigger: GGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCT...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACCAAGGCTCCCACACCTaGAGGAAGGTGGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHQGSHT*RKVVWI
Trigger: GATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTG...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACTAGAGGAGGCACCCTaGCATGCAGACCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQLEEAP*HADLMG
Trigger: CCCCATCAGGTCTGCATGCCAGGGTGCCTCCTCTAG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAACTCCTCCTGGAGTGTaGCCCTTCTGGGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQTPPGV*PFWGGD
Trigger: GTCACCTCCCCAGAAGGGCCACACTCCAGGAGGAGT...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCATCTCAACACTCCTCCTaGAGTGTGGCCCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSSQHSS*SVALLG
Trigger: CCCCAGAAGGGCCACACTCCAGGAGGAGTGTTGAGA...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGTCTCAACACTCCTCCTaGAGTGTGGCCCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVSQHSS*SVALLG
Trigger: CCCCAGAAGGGCCACACTCCAGGAGGAGTGTTGAGA...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCTCAACACTCCTCCTaGAGTGTGGCCCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHSQHSS*SVALLG
Trigger: CCCCAGAAGGGCCACACTCCAGGAGGAGTGTTGAGA...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACCGAGGGGCCGCTCCATaGTGGGCTCCTGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHRGAAP*WAPGPV
Trigger: AACCGGCCCAGGAGCCCATCATGGAGCGGCCCCTCG...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTGACAGTGGTTCTGGCTaGAGGCTCTGCCGCACTCGC +
Preference number: 4 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFADSGSG*RLCRTR
Trigger: GCGAGTGCGGCAGAGCCTTCAGCCAGAACCACTGTC...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR TCA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACAACTCCGTATAAAGTATaGTCACCAAGAGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTTPYKV*SPRGQL
Trigger: AAGCTGCCCTCTTGGTGATCATACTTTATACGGAGT...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGGTTCTTCTTTGCAAATaGCCTGCTGTTGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPVSEECWDRESRLFQGLVLLCK*PAVERA
Trigger: TGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAAC...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGCCCTCGGGAACGCGTTaGTGGGCGAAGAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKPSGTR*WAKRGH
Trigger: GTGTCCCCTCTTCGCCCAGCAACGCGTTCCCGAGGG...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAATGGCCTGGACGTTCTTaGGTGTGTCCAGCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQWPGRS*VCPARV
Trigger: GACCCTTGCTGGACACACGCAAGAACGTCCAGGCCA...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACGTTAGTTTCGAGGTTTaGTCCCCAGGGAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYVSFEV*SPGRNS
Trigger: GGAATTTCTCCCTGGGGAGCAAACCTCGAAACTAAC...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACATGAGAGATCACATCTaGCTTGTGCAGTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDMRDHI*LVQWRS
Trigger: GGACCTCCACTGCACAAGCCAGATGTGATCTCTCAT...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTCTGGACAGGGCCCTCTaGGGACTTCCCTCTGCATGC +
Preference number: 4 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFALDRAL*GLPSAC
Trigger: GCATGCAGAGGGAAGTCCCCAGAGGGCCCTGTCCAG...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACCTGGGGGAACTTTTCTaGCTCACTTGGCGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNLGELF*LTWRGG
Trigger: GCCTCCACGCCAAGTGAGCCAGAAAAGTTCCCCCAG...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACTGGGGGAACTTTTCTaGCTCACTTGGCGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQLGELF*LTWRGG
Trigger: GCCTCCACGCCAAGTGAGCCAGAAAAGTTCCCCCAG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGACACCTGGAGGAAGGTaGTCTGGATCTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVTPGGR*SGSRSQ
Trigger: CTGGCTCCTAGATCCAGACCACCTTCCTCCAGGTGT...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTCAAGGCTCCCACACCTaGAGGAAGGTGGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSQGSHT*RKVVWI
Trigger: GATCCAGACCACCTTCCTCCAGGTGTGGGAGCCTTG...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCTCACTAGGGGCTAAATaGCAAGAGGTGATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNASLGAK*QEVMLA
Trigger: TGCCAACATCACCTCTTGCCATTTAGCCCCTAGTGA...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAAGCTTCTTCTGTGACCTaGGCTGGTGACTGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQASSVT*AGDWCY
Trigger: GTAGCACCAGTCACCAGCCCAGGTCACAGAAGAAGC...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGGGTGCGAGCTCCAGTTaGACATCTCCCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVGASSS*TSPHIS
Trigger: AGAAATGTGGGGAGATGTTCAACTGGAGCTCGCACC...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGGCCCTTCTGGGGAGGTaGCTGACTTTAACTAGAGGA +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVALLGR*LTLTRG
Trigger: TCCTCTAGTTAAAGTCAGTCACCTCCCCAGAAGGGC...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTTGTGCCCATCTTCCCTaGATGCACTGGGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFACAHLP*MHWAPA
Trigger: GGCAGGTGCCCAGTGCATTCAGGGAAGATGGGCACA...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR TCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGCTGTCTTCCTGTCTCTaGAGAGTGTTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVLSSCL*RVLGQG
Trigger: TCCCTGTCCCAACACTCTTCAGAGACAGGAAGACAG...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCACTCCGTATAAAGTATaGTCACCAAGAGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNATPYKV*SPRGQL
Trigger: AAGCTGCCCTCTTGGTGATCATACTTTATACGGAGT...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGCTCCCACAAAAGGACTaGGACTGCCACAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVLPQKD*DCHKEQ
Trigger: CTGCTCTTTGTGGCAGTCGCAGTCCTTTTGTGGGAG...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000611540.4
CDS-3UTR GCA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACGTTCTTCTTTGCAAATaGCCTGCTGTTGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDVLLCK*PAVERA
Trigger: TGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAAC...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACGGGCCGGTTCTTCTTTaGAAATGCCCTGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYGPVLL*KCPAVE
Trigger: CTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCC...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGCTGTGGATCTTCTCATaGACGGTGAGGGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVLWIFS*TVRDEW
Trigger: CCACTCATCCCTCACCGTGCATGAGAAGATCCACAG...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGTTAGTTTCGAGGTTTaGTCCCCAGGGAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: AARHVVCAEQVFVELDGQVSFEV*SPGRNS
Trigger: GGAATTTCTCCCTGGGGAGCAAACCTCGAAACTAAC...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR GCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAATCACCCAGGCTGCAGTaGAGTGCTGTGAATCATGGC +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQSPRLQ*SAVNHG
Trigger: GCCATGATTCACAGCACTGCACTGCAGCCTGGGTGA...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACAATGCACTGGGCACCTaGCTGGTAGCTCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHNALGT*LVAPNF
Trigger: GAAATTGGGAGCTACCAGGCAGGTGCCCAGTGCATT...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCTTCAGCTCCCATTCTaGACAGGGCCCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRLQLPF*TGPSGD
Trigger: GTCCCCAGAGGGCCCTGTCCAGAATGGGAGCTGAAG...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCATCCATGATGGGCTCCTaGGCCGGTTCTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSSMMGS*AGSSLQ
Trigger: TTGCAAAGAAGAACCGGCCCAGGAGCCCATCATGGA...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACTCCATGATGGGCTCCTaGGCCGGTTCTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYSMMGS*AGSSLQ
Trigger: TTGCAAAGAAGAACCGGCCCAGGAGCCCATCATGGA...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACTTTTCTGGCTCACTTaGCGTGGAGGCGTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQLFWLT*RGGVFP
Trigger: GGGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGCGCTGCCGGCGCACCTaGGGGAACTTTTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKRCRRT*GNFSGS
Trigger: TGAGCCAGAAAAGTTCCCCCAGGTGCGCCGGCAGCG...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACATGAGACAGTGGTTCTaGCTGAAGGCTCTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNMRQWF*LKALPH
Trigger: GTGCGGCAGAGCCTTCAGCCAGAACCACTGTCTCAT...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTATGAGACAGTGGTTCTaGCTGAAGGCTCTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSMRQWF*LKALPH
Trigger: GTGCGGCAGAGCCTTCAGCCAGAACCACTGTCTCAT...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACAGGTGTTTGTTGAACTaGATGGCCAAGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYRCLLN*MAKGFP
Trigger: GGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCT...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCACTAGAGGAGGCACCCTaGCATGCAGACCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: VSGARPRIQQLIYLLLISLEEAP*HADLMG
Trigger: CCCCATCAGGTCTGCATGCCAGGGTGCCTCCTCTAG...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAGTGATCCCCTTGCCTTaGCCTCCCACAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSVIPLP*PPTVLR
Trigger: TCTTAACACTGTGGGAGGCCAAGGCAAGGGGATCAC...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACGTGATCCCCTTGCCTTaGCCTCCCACAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHVIPLP*PPTVLR
Trigger: TCTTAACACTGTGGGAGGCCAAGGCAAGGGGATCAC...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACCTGGTCCTAGACTCCTaGGCTCAAGTGATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNLVLDS*AQVIPL
Trigger: CAAGGGGATCACTTGAGCCCAGGAGTCTAGGACCAG...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGCAGTGCTGTGAATCATaGCTCACTGCAGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVQCCES*LTAALT
Trigger: GGTCAAGGCTGCAGTGAGCCATGATTCACAGCACTG...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACGGGCAGGGATCTCCATaGCCTCCACGGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHGQGSP*PPRQPP
Trigger: GGGAGGCTGCCGTGGAGGCCATGGAGATCCCTGCCC...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACAAGAGCCAAACTCTTaGACCTGGCTTCGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSQEPNS*TWLRED
Trigger: GTCTTCCCGAAGCCAGGTCCAAGAGTTTGGCTCTTG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR TCA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAACCGGAGTGGATTTTCTaGTGTTTAATGAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: AARHVVCAEQVFVELDGQPEWIF*CLMRQW
Trigger: CCACTGTCTCATTAAACATCAGAAAATCCACTCCGG...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR TCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACGGTGCGAGCTCCAGTTaGACATCTCCCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNGASSS*TSPHIS
Trigger: AGAAATGTGGGGAGATGTTCAACTGGAGCTCGCACC...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACGGGTGCTTTCCTTGTTaGGTAGCTCAGAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHGCFPC*VAQKAA
Trigger: AGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCC...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACCTAAATGGCAAGAGGTaGTGTTGGCATGTTAGGATC +
Preference number: 4 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDLNGKR*CWHVRI
Trigger: GATCCTAACATGCCAACATCACCTCTTGCCATTTAG...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAACTAAATGGCAAGAGGTaGTGTTGGCATGTTAGGATC +
Preference number: 4 (lower is better)
Translates to: AARHVVCAEQVFVELDGQLNGKR*CWHVRI
Trigger: GATCCTAACATGCCAACATCACCTCTTGCCATTTAG...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR TCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGTGTGCCCATCTTCCCTaGATGCACTGGGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKCAHLP*MHWAPA
Trigger: GGCAGGTGCCCAGTGCATTCAGGGAAGATGGGCACA...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACTGTGGATCTTCTCATaGACGGTGAGGGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQLWIFS*TVRDEW
Trigger: CCACTCATCCCTCACCGTGCATGAGAAGATCCACAG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGGAGGCACCCTGGCATaGAGACCTGATGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKGGTLA*RPDGGD
Trigger: ATCACCCCCATCAGGTCTGCATGCCAGGGTGCCTCC...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGACCACGCGCTCACAGCTaGACGATCACACGCACGGAG +
Preference number: 4 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGPRAHS*TITRTE
Trigger: CTCCGTGCGTGTGATCGTGCAGCTGTGAGCGCGTGG...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400451.7
ENST00000437275.5
CDS-3UTR GCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAAATGCACTGGGCACCTaGCTGGTAGCTCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQNALGT*LVAPNF
Trigger: GAAATTGGGAGCTACCAGGCAGGTGCCCAGTGCATT...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAATGAGAGATCACATCTaGCTTGTGCAGTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSMRDHI*LVQWRS
Trigger: GGACCTCCACTGCACAAGCCAGATGTGATCTCTCAT...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGACTGGACAGGGCCCTCTaGGGACTTCCCTCTGCATGC +
Preference number: 4 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGLDRAL*GLPSAC
Trigger: GCATGCAGAGGGAAGTCCCCAGAGGGCCCTGTCCAG...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACTCCATGATGGGCTCCTaGGCCGGTTCTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNSMMGS*AGSSLQ
Trigger: TTGCAAAGAAGAACCGGCCCAGGAGCCCATCATGGA...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTTGGTTCTGCCCTCAGTaGCCTGGACGTTCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFAWFCPQ*PGRSCV
Trigger: CACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCA...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCACTGGGGGAACTTTTCTaGCTCACTTGGCGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VSGARPRIQQLIYLLLISLGELF*LTWRGG
Trigger: GCCTCCACGCCAAGTGAGCCAGAAAAGTTCCCCCAG...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGTGTGGATGCGGTGGTaGCGTGTGAGGTGTGTACGC +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKVWMRW*RVRCVR
Trigger: GCGTACACACCTCACACGCCACCACCGCATCCACAC...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGGGCTTGTCCCCGCTGTaGATCTTCTCATGCACGGTG +
Preference number: 4 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRGLSPL*IFSCTV
Trigger: CACCGTGCATGAGAAGATCCACAGCGGGGACAAGCC...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACAGGTGTTTGTTGAACTaGATGGCCAAGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNRCLLN*MAKGFP
Trigger: GGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCT...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGACTCCTCCTGGAGTGTaGCCCTTCTGGGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKTPPGV*PFWGGD
Trigger: GTCACCTCCCCAGAAGGGCCACACTCCAGGAGGAGT...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTATCCCTTCTTTTTATTaGCAAGAAAGATCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGIPSFY*QERSFP
Trigger: GGGGAAAGATCTTTCTTGCCAATAAAAAGAAGGGAT...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGTACAGGTGTGAGCCATaGCACCCAACGATATCCCTT +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVYRCEP*HPTISL
Trigger: AAGGGATATCGTTGGGTGCCATGGCTCACACCTGTA...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTCAGTGCTGTGAATCATaGCTCACTGCAGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSQCCES*LTAALT
Trigger: GGTCAAGGCTGCAGTGAGCCATGATTCACAGCACTG...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACAGTGCTGTGAATCATaGCTCACTGCAGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQQCCES*LTAALT
Trigger: GGTCAAGGCTGCAGTGAGCCATGATTCACAGCACTG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGAGGCCCTGCCCAGCCCTaGTCAGTGAAGAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGGPAQP*SVKRSF
Trigger: GAAGCTCCTCTTCACTGACCAGGGCTGGGCAGGGCC...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGGGTGCTTTCCTTGTTaGGTAGCTCAGAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQGCFPC*VAQKAA
Trigger: AGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACAAGACTACCTCAAATaGCTCTCAACACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSQDYLK*LSTLLL
Trigger: CAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAATATGGAGGAAACTCCTaGTTAAAGCCGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQYGGNS*LKPCQE
Trigger: CTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATA...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGTGTGACCTGGGCTGGTaGCTGGTGCTACATAGTGAG +
Preference number: 4 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRCDLGW*LVLHSE
Trigger: CTCACTATGTAGCACCAGTCACCAGCCCAGGTCACA...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACGAAGTCCACATTTTCTaGAGTGTGGTTATTTTGCCT +
Preference number: 4 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYEVHIF*SVVILP
Trigger: AGGCAAAATAACCACACTTCAGAAAATGTGGACTTC...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGAGGTGGAGGTTGCAGTaGGCCAAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKRWRLQ*AKIAPL
Trigger: CAGTGGCGCAATCTTGGCTCACTGCAACCTCCACCT...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR TCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAAACTCACCGATTCCTaGGGTCAGGAGAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSKLTDS*GQENCL
Trigger: CAAGCAATTCTCCTGACCTCAGGAATCGGTGAGTTT...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR GCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACGTTCTTCTTTGCAAATaGCCTGCTGTTGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYVLLCK*PAVERA
Trigger: TGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAAC...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGACTGCACCCAGCAGGCTaGCAGGCACGTAGTATGTGC +
Preference number: 4 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGLHPAG*QARSMC
Trigger: GCACATACTACGTGCCTGGCAGCCTGCTGGGTGCAG...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACGTTAGTTTCGAGGTTTaGTCCCCAGGGAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYVSFEV*SPGRNS
Trigger: GGAATTTCTCCCTGGGGAGCAAACCTCGAAACTAAC...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAGTTAGTTTCGAGGTTTaGTCCCCAGGGAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSVSFEV*SPGRNS
Trigger: GGAATTTCTCCCTGGGGAGCAAACCTCGAAACTAAC...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGCTAAACACACAGCTCTaGAGTAGAGCTATTTACATG +
Preference number: 4 (lower is better)
Translates to: LPVSEECWDRESRLFQGLLNTQL*SRAIYM
Trigger: CATGTAAATAGCTCTACTGCAGAGCTGTGTGTTTAG...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGCCTTTTCCAGGGTTTaGAAAACAGCTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQAFSRV*KTAPCG
Trigger: CCCACATGGAGCTGTTTTGCAAACCCTGGAAAAGGC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACATGAGAGATCACATCTaGCTTGTGCAGTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNMRDHI*LVQWRS
Trigger: GGACCTCCACTGCACAAGCCAGATGTGATCTCTCAT...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACCTGGACAGGGCCCTCTaGGGACTTCCCTCTGCATGC +
Preference number: 4 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHLDRAL*GLPSAC
Trigger: GCATGCAGAGGGAAGTCCCCAGAGGGCCCTGTCCAG...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGTGGTTCTGCCCTCAGTaGCCTGGACGTTCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKWFCPQ*PGRSCV
Trigger: CACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCA...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCACTTTTCTGGCTCACTTaGCGTGGAGGCGTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: VSGARPRIQQLIYLLLISLFWLT*RGGVFP
Trigger: GGGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAG...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATCGCTGCCGGCGCACCTaGGGGAACTTTTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNRCRRT*GNFSGS
Trigger: TGAGCCAGAAAAGTTCCCCCAGGTGCGCCGGCAGCG...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGTCTCAACACTCCTCCTaGAGTGTGGCCCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKSQHSS*SVALLG
Trigger: CCCCAGAAGGGCCACACTCCAGGAGGAGTGTTGAGA...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACTACAGGTGTGAGCCATaGCACCCAACGATATCCCTT +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNYRCEP*HPTISL
Trigger: AAGGGATATCGTTGGGTGCCATGGCTCACACCTGTA...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCACCAAACTCTTGGACCTaGCTTCGGGAAGACCCCAAC +
Preference number: 4 (lower is better)
Translates to: VSGARPRIQQLIYLLLISPNSWT*LREDPN
Trigger: GTTGGGGTCTTCCCGAAGCCAGGTCCAAGAGTTTGG...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR TCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCATCAGAAAGCAGCTACTaGCACCAAAGCACATCATGT +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSSESSY*HQSTSC
Trigger: ACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGA...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGTCAGAAAGCAGCTACTaGCACCAAAGCACATCATGT +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVSESSY*HQSTSC
Trigger: ACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGA...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGGCCCTTCTGGGGAGGTaGCTGACTTTAACTAGAGGA +
Preference number: 4 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRALLGR*LTLTRG
Trigger: TCCTCTAGTTAAAGTCAGTCACCTCCCCAGAAGGGC...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGGTAGAGCTATTTACATaGGTTAAGTCCAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: LPVSEECWDRESRLFQGLVELFT*VKSRKF
Trigger: GAATTTCCTGGACTTAACTCATGTAAATAGCTCTAC...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACCCCAGCCCTGGTCAGTaGAGAGGAGCTTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHPSPGQ*RGASRH
Trigger: GTGTCTGGAAGCTCCTCTTCACTGACCAGGGCTGGG...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGACTCCGTATAAAGTATaGTCACCAAGAGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVTPYKV*SPRGQL
Trigger: AAGCTGCCCTCTTGGTGATCATACTTTATACGGAGT...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCACTCCCACAAAAGGACTaGGACTGCCACAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: VSGARPRIQQLIYLLLISLPQKD*DCHKEQ
Trigger: CTGCTCTTTGTGGCAGTCGCAGTCCTTTTGTGGGAG...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000611540.4
CDS-3UTR GCA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGTTCTTCTTTGCAAATaGCCTGCTGTTGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQVLLCK*PAVERA
Trigger: TGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAAC...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGGGGCCGGTTCTTCTTTaGAAATGCCCTGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRGPVLL*KCPAVE
Trigger: CTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCC...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGTCACCCAGGCTGCAGTaGAGTGCTGTGAATCATGGC +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKSPRLQ*SAVNHG
Trigger: GCCATGATTCACAGCACTGCACTGCAGCCTGGGTGA...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGTTCACTTTTTCCAAATaGCCACCACCCAAGATTATT +
Preference number: 4 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGFTFSK*PPPKII
Trigger: AATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAA...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR CCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGACCGATTCCTTGGACCTaGCTTCGGGAAGACCCCAAC +
Preference number: 4 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGPIPWT*LREDPN
Trigger: GTTGGGGTCTTCCCGAAGCCAGGTCCAAGGAATCGG...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400451.7
ENST00000611540.4
CDS-3UTR CCA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACCTGGCTCACTTGGCGTaGAGGCGTTTTCCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHLAHLA*RRFPLH
Trigger: GTGCAGGGGAAAACGCCTCCACGCCAAGTGAGCCAG...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACCATCCAGCGCGTCGATaGGATCCACGTCCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHHPARR*DPRPSV
Trigger: GACTGAGGGACGTGGATCCCATCGACGCGCTGGATG...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGACACCTGGAGGAAGGTaGTCTGGATCTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKTPGGR*SGSRSQ
Trigger: CTGGCTCCTAGATCCAGACCACCTTCCTCCAGGTGT...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGATCCCTTCTTTTTATTaGCAAGAAAGATCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LPVSEECWDRESRLFQGLIPSFY*QERSFP
Trigger: GGGGAAAGATCTTTCTTGCCAATAAAAAGAAGGGAT...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCTTCTTCTGTGACCTaGGCTGGTGACTGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKASSVT*AGDWCY
Trigger: GTAGCACCAGTCACCAGCCCAGGTCACAGAAGAAGC...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGTCTCTGAAGAGTGTTaGGACAGGGAGAGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKVSEEC*DRESRL
Trigger: AAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGAC...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTCCGGAGTGGATTTTCTaGTGTTTAATGAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSPEWIF*CLMRQW
Trigger: CCACTGTCTCATTAAACATCAGAAAATCCACTCCGG...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGCTCCCACAAAAGGACTaGGACTGCCACAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKLPQKD*DCHKEQ
Trigger: CTGCTCTTTGTGGCAGTCGCAGTCCTTTTGTGGGAG...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000611540.4
CDS-3UTR GCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGATCACCCAGGCTGCAGTaGAGTGCTGTGAATCATGGC +
Preference number: 4 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGSPRLQ*SAVNHG
Trigger: GCCATGATTCACAGCACTGCACTGCAGCCTGGGTGA...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCAATGAGAGATCACATCTaGCTTGTGCAGTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: VSGARPRIQQLIYLLLISMRDHI*LVQWRS
Trigger: GGACCTCCACTGCACAAGCCAGATGTGATCTCTCAT...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR CAA 72 bp AAAGCCGTGTCAGGAGCCCGTCCGAGGATACAACAGTaGATATACCTCCTTTTAATTTCACACAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: KAVSGARPRIQQ*IYLLLISHRVL
Trigger: CAAGACCCTGTGTGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACACGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGAGGTGCGAGCTCCAGTTaGACATCTCCCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGGASSS*TSPHIS
Trigger: AGAAATGTGGGGAGATGTTCAACTGGAGCTCGCACC...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCAGTTAGTTTCGAGGTTTaGTCCCCAGGGAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: VSGARPRIQQLIYLLLISVSFEV*SPGRNS
Trigger: GGAATTTCTCCCTGGGGAGCAAACCTCGAAACTAAC...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCACTAAACACACAGCTCTaGAGTAGAGCTATTTACATG +
Preference number: 4 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSLNTQL*SRAIYM
Trigger: CATGTAAATAGCTCTACTGCAGAGCTGTGTGTTTAG...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGATCCATGATGGGCTCCTaGGCCGGTTCTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGSMMGS*AGSSLQ
Trigger: TTGCAAAGAAGAACCGGCCCAGGAGCCCATCATGGA...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACATGAGACAGTGGTTCTaGCTGAAGGCTCTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHMRQWF*LKALPH
Trigger: GTGCGGCAGAGCCTTCAGCCAGAACCACTGTCTCAT...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACCTGGTCCTAGACTCCTaGGCTCAAGTGATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHLVLDS*AQVIPL
Trigger: CAAGGGGATCACTTGAGCCCAGGAGTCTAGGACCAG...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTCCGGAGTGGATTTTCTaGTGTTTAATGAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFAPEWIF*CLMRQW
Trigger: CCACTGTCTCATTAAACATCAGAAAATCCACTCCGG...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR TCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCATCAGAAAGCAGCTACTaGCACCAAAGCACATCATGT +
Preference number: 4 (lower is better)
Translates to: VSGARPRIQQLIYLLLISSESSY*HQSTSC
Trigger: ACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGA...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGCAAGACTACCTCAAATaGCTCTCAACACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKQDYLK*LSTLLL
Trigger: CAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTG...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGTATGGAGGAAACTCCTaGTTAAAGCCGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKYGGNS*LKPCQE
Trigger: CTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATA...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATGGGCCGGTTCTTCTTTaGAAATGCCCTGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNGPVLL*KCPAVE
Trigger: CTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCC...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACCTAAACACACAGCTCTaGAGTAGAGCTATTTACATG +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNLNTQL*SRAIYM
Trigger: CATGTAAATAGCTCTACTGCAGAGCTGTGTGTTTAG...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGACCCATCCTGATGTTGTaGCCATCTTCCCTGAATGCA +
Preference number: 4 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGPILML*PSSLNA
Trigger: TGCATTCAGGGAAGATGGGCACAACATCAGGATGGG...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGAGCCTTTTCCAGGGTTTaGAAAACAGCTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGAFSRV*KTAPCG
Trigger: CCCACATGGAGCTGTTTTGCAAACCCTGGAAAAGGC...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACAACTCACCGATTCCTTaGACCTGGCTTCGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHNSPIP*TWLRED
Trigger: GTCTTCCCGAAGCCAGGTCCAAGGAATCGGTGAGTT...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400451.7
ENST00000611540.4
CDS-3UTR CCA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACAGGTGTTTGTTGAACTaGATGGCCAAGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHRCLLN*MAKGFP
Trigger: GGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCT...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGATACAGGTGTGAGCCATaGCACCCAACGATATCCCTT +
Preference number: 4 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGYRCEP*HPTISL
Trigger: AAGGGATATCGTTGGGTGCCATGGCTCACACCTGTA...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATACCTGGGCTGGTGACTaGTGCTACATAGTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNTWAGD*CYIVRS
Trigger: GCTTCTCACTATGTAGCACCAGTCACCAGCCCAGGT...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
3UTR CAA 72 bp GTGAGCCATGGCACCCAACGATATCCCTTCTTTTTATaGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTC +
Preference number: 4 (lower is better)
Translates to: VSHGTQRYPFFL*ARKIFPLVNNF
Trigger: GAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAAAGAAGGGATATCGTTGGGTGCCATGGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACGGGTGCTTTCCTTGTTaGGTAGCTCAGAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHGCFPC*VAQKAA
Trigger: AGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCC...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGTAGAGCTATTTACATaGGTTAAGTCCAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSVELFT*VKSRKF
Trigger: GAATTTCCTGGACTTAACTCATGTAAATAGCTCTAC...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATCCCATCCTGATGTTGTaGCCATCTTCCCTGAATGCA +
Preference number: 4 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNPILML*PSSLNA
Trigger: TGCATTCAGGGAAGATGGGCACAACATCAGGATGGG...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACATCCCTTCTTTTTATTaGCAAGAAAGATCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNIPSFY*QERSFP
Trigger: GGGGAAAGATCTTTCTTGCCAATAAAAAGAAGGGAT...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGACCGGAGTGGATTTTCTaGTGTTTAATGAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGPEWIF*CLMRQW
Trigger: CCACTGTCTCATTAAACATCAGAAAATCCACTCCGG...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACTATGGAGGAAACTCCTaGTTAAAGCCGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHYGGNS*LKPCQE
Trigger: CTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATA...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGGAAGTCCACATTTTCTaGAGTGTGGTTATTTTGCCT +
Preference number: 4 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSREVHIF*SVVILP
Trigger: AGGCAAAATAACCACACTTCAGAAAATGTGGACTTC...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACTCAGAAAGCAGCTACTaGCACCAAAGCACATCATGT +
Preference number: 4 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHSESSY*HQSTSC
Trigger: ACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGA...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATCTAAATGGCAAGAGGTaGTGTTGGCATGTTAGGATC +
Preference number: 4 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNLNGKR*CWHVRI
Trigger: GATCCTAACATGCCAACATCACCTCTTGCCATTTAG...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR GCA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCATTCACTTTTTCCAAATaGCCACCACCCAAGATTATT +
Preference number: 4 (lower is better)
Translates to: VSGARPRIQQLIYLLLISFTFSK*PPPKII
Trigger: AATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAA...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGATCCCTTCTTTTTATTaGCAAGAAAGATCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRIPSFY*QERSFP
Trigger: GGGGAAAGATCTTTCTTGCCAATAAAAAGAAGGGAT...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CCA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGATCCCTTCTTTTTATTaGCAAGAAAGATCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKIPSFY*QERSFP
Trigger: GGGGAAAGATCTTTCTTGCCAATAAAAAGAAGGGAT...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR TCA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATGTAGAGCTATTTACATaGGTTAAGTCCAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNVELFT*VKSRKF
Trigger: GAATTTCCTGGACTTAACTCATGTAAATAGCTCTAC...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS GCA 90 bp GGACCGGCAAGTGGACAGACCGGACTCCCACAAAAGGACTGCGACTaGCACAAAGAGCAGCAGGCGGCCGCTGCGGGAAAGCGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: GPASGQTGLPQKDCD*HKEQQAAAAGKRAC
Trigger: GCAGGCGCGCTTTCCCGCAGCGGCCGCCTGCTGCTCTTTGTGGCAGTCGCAGTCCTTTTGTGGGAGTCCGGTCTGTCCACTTGCCGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403682.7
ENST00000611540.4
CDS TCA 90 bp CGACCAGCGGACAGGTCCCGAAGCGGACAGAGACCGCCGACGGTCTaGGGGACCGGCAAGTGGACAGACCGGACTCCCACAAAAGGACTG +
Preference number: 5 (lower is better)
Translates to: RPADRSRSGQRPPTV*GTGKWTDRTPTKGL
Trigger: CAGTCCTTTTGTGGGAGTCCGGTCTGTCCACTTGCCGGTCCCTCAGACCGTCGGCGGTCTCTGTCCGCTTCGGGACCTGTCCGCTGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000611540.4
CDS GCA 90 bp TCTGAGGGACCGGCAAGTGGACAGACCGGACTCCCACAAAAGGACTaGGACTGCCACAAAGAGCAGCAGGCGGCCGCTGCGGGAAAGCGC +
Preference number: 5 (lower is better)
Translates to: SEGPASGQTGLPQKD*DCHKEQQAAAAGKR
Trigger: GCGCTTTCCCGCAGCGGCCGCCTGCTGCTCTTTGTGGCAGTCGCAGTCCTTTTGTGGGAGTCCGGTCTGTCCACTTGCCGGTCCCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403682.7
ENST00000611540.4
CDS GCA 90 bp TGCAGTGGAGGTCCTGCTCGTGGAGAGAAAGTGGGCTGGGCATGCTaGAGCTCTCCAGGCCCAGTCGACCTTACAGGCCGCCCCCTAACA +
Preference number: 5 (lower is better)
Translates to: CSGGPARGEKVGWAC*SSPGPVDLTGRPLT
Trigger: TGTTAGGGGGCGGCCTGTAAGGTCGACTGGGCCTGGAGAGCTGCAGCATGCCCAGCCCACTTTCTCTCCACGAGCAGGACCTCCACTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS GCA 90 bp TTGTGCAGTGGAGGTCCTGCTCGTGGAGAGAAAGTGGGCTGGGCATaGTGCAGCTCTCCAGGCCCAGTCGACCTTACAGGCCGCCCCCTA +
Preference number: 5 (lower is better)
Translates to: LCSGGPARGEKVGWA*CSSPGPVDLTGRPL
Trigger: TAGGGGGCGGCCTGTAAGGTCGACTGGGCCTGGAGAGCTGCAGCATGCCCAGCCCACTTTCTCTCCACGAGCAGGACCTCCACTGCACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS CCA 90 bp TCTGGCTTGTGCAGTGGAGGTCCTGCTCGTGGAGAGAAAGTGGGCTaGGCATGCTGCAGCTCTCCAGGCCCAGTCGACCTTACAGGCCGC +
Preference number: 5 (lower is better)
Translates to: SGLCSGGPARGEKVG*ACCSSPGPVDLTGR
Trigger: GCGGCCTGTAAGGTCGACTGGGCCTGGAGAGCTGCAGCATGCCCAGCCCACTTTCTCTCCACGAGCAGGACCTCCACTGCACAAGCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS-3UTR CAA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCAGTGGCCTGGACGTTCTaGCGTGTGTCCAGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPVAWTF*RVSSKG
Trigger: ACCCTTGCTGGACACACGCAAGAACGTCCAGGCCAC...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTTGGCAGGTGAAGGCCTaGCCGCAGGAGCCGCACTGG +
Preference number: 5 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGWQVKA*PQEPHW
Trigger: CCAGTGCGGCTCCTGCGGCAAGGCCTTCACCTGCCA...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTAGGCGCGAGCGGCTGTaGAAGGCCTTCTCGCAGTCG +
Preference number: 5 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGRRERL*KAFSQS
Trigger: CGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCCT...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCTCTGGTGCAGGCGCGAGCGGCTGTaGAAGGCCTTCTCGCAGTCG +
Preference number: 5 (lower is better)
Translates to: CLLNWMAKGFPSLCSLWCRRERL*KAFSQS
Trigger: CGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCCT...GCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp TTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACAGCTGTGGGAATGCCCCCCTCGGGAACGCGTaGCTGGGCGAAGAGGGGACA +
Preference number: 5 (lower is better)
Translates to: LGSGYNDAGPCCDSCGNAPLGNA*LGEEGT
Trigger: TGTCCCCTCTTCGCCCAGCAACGCGTTCCCGAGGGG...GGCATTCCCACAGCTGTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTGCAAATGCCCTGCTGTaGAGAGGGCACCGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGANALL*RGHRLQ
Trigger: CTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGC...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGCAAATGCCCTGCTGTaGAGAGGGCACCGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGANALL*RGHRLQ
Trigger: CTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGC...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CATCCAGCGCGTCGATGGGATCCACGTCCCTCAGTCCAGCATCCCCTGCACCCAACAAGAGCCAAACTCTaGGACCTGGCTTCGGGAAGA +
Preference number: 5 (lower is better)
Translates to: HPARRWDPRPSVQHPLHPTRAKL*DLASGR
Trigger: TCTTCCCGAAGCCAGGTCCAAGAGTTTGGCTCTTGT...TGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS TCA 90 bp ATGATGGGCTCCTGGGCCGGTTCTTCTTTGCAAATGCCCTGCTGTTaGGAGGGCACCGCCTTCAGCTCCCATTCTGTCTTCTCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: MMGSWAGSSLQMPCC*EGTAFSSHSVFSGS
Trigger: GGAGCCCGAGAAGACAGAATGGGAGCTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGAGCCCATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420626.1
CDS CCA 90 bp GTCGACCTTACAGGCCGCCCCCTAACAAGGACAATGCCTGTGAAGTaGACACCCTCTCTGGGAACAGGAGGTCCTCTGGGCCAAAAGCAG +
Preference number: 5 (lower is better)
Translates to: VDLTGRPLTRTMPVK*TPSLGTGGPLGQKQ
Trigger: CTGCTTTTGGCCCAGAGGACCTCCTGTTCCCAGAGAGGGTGTCCACTTCACAGGCATTGTCCTTGTTAGGGGGCGGCCTGTAAGGTCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS-3UTR CAA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACCGGTGCTCCAGAAGGTaGGTGCTCCAGGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYRCSRR*VLQVKA
Trigger: GGCCTTCACCTGGAGCACCAACCTTCTGGAGCACCG...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTCGAGGTCTCACCATGTaGTCCAGGCTGGTCCTAGAC +
Preference number: 5 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGRGLTM*SRLVLD
Trigger: GTCTAGGACCAGCCTGGACAACATGGTGAGACCTCG...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TGGTTCTGCCCTCAGTGGCCTGGACGTTCTTGCGTGTGTCCAGCAAGGGTCCCCGGTCAGGAGAATTGCTaGAACCCAAGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: WFCPQWPGRSCVCPARVPGQENC*NPRGGG
Trigger: ACCTCCACCTCTTGGGTTCAAGCAATTCTCCTGACC...GGGGACCCTTGCTGGACACACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS GCA 90 bp TCGTTCCAGATGAGAGATCACATCTGGCTTGTGCAGTGGAGGTCCTaGTCGTGGAGAGAAAGTGGGCTGGGCATGCTGCAGCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SFQMRDHIWLVQWRS*SWRESGLGMLQLSR
Trigger: CCTGGAGAGCTGCAGCATGCCCAGCCCACTTTCTCTCCACGAGCAGGACCTCCACTGCACAAGCCAGATGTGATCTCTCATCTGGAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS-3UTR CAA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGGCAAATGCCCTGCTGTaGAGAGGGCACCGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LPVSEECWDRESRLFQGLANALL*RGHRLQ
Trigger: CTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGC...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCCCCTCGGGAACGCGTaGCTGGGCGAAGAGGGGACA +
Preference number: 5 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYPLGNA*LGEEGT
Trigger: TGTCCCCTCTTCGCCCAGCAACGCGTTCCCGAGGGG...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCGTGGCCTGGACGTTCTaGCGTGTGTCCAGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: QAARHVVCAEQVFVELDGVAWTF*RVSSKG
Trigger: ACCCTTGCTGGACACACGCAAGAACGTCCAGGCCAC...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAGTCTCGCGGGGGCCTaGGTTCTGCCCTCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSSLAGA*VLPSVA
Trigger: GGCCACTGAGGGCAGAACCAAGGCCCCCGCGAGACT...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCACTTTTCTGGCTCACTaGGCGTGGAGGCGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: LSRCLLNWMAKGFPSLCSTFLAH*AWRRFP
Trigger: GGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAGT...GCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp GCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCCACGCACAAGAGCTTaGCCACATCCAGCGCGTCGA +
Preference number: 5 (lower is better)
Translates to: ARHVVCAEQVFVELDGQGPRTRA*PHPARR
Trigger: TCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTGG...CCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCCACGCACAAGAGCTTaGCCACATCCAGCGCGTCGA +
Preference number: 5 (lower is better)
Translates to: QAARHVVCAEQVFVELDGPRTRA*PHPARR
Trigger: TCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTGG...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACCCACGCACAAGAGCTTaGCCACATCCAGCGCGTCGA +
Preference number: 5 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYPRTRA*PHPARR
Trigger: TCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTGG...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTAGTGATCCCCTTGCCTaGGCCTCCCACAGTGTTAAG +
Preference number: 5 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGSDPLA*ASHSVK
Trigger: CTTAACACTGTGGGAGGCCAAGGCAAGGGGATCACT...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS TCA 90 bp ATGATGGGCTCCTGGGCCGGTTCTTCTTTGCAAATGCCCTGCTGTTaGGAGGGCACCGCCTTCAGCTCCCATTCTAGGGCAAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: MMGSWAGSSLQMPCC*EGTAFSSHSRARRF
Trigger: GAACCTTCTTGCCCTAGAATGGGAGCTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGAGCCCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405993.2
CDS TCA 90 bp TTGGCATGCATTCCCACACCACCTTCTAGATTGGGAAAGCAGGTCTaGATAGACACCACAGGGCCCTGGCAACTTGCGGTGGGACCCAGG +
Preference number: 5 (lower is better)
Translates to: LACIPTPPSRLGKQV*IDTTGPWQLAVGPR
Trigger: CCTGGGTCCCACCGCAAGTTGCCAGGGCCCTGTGGTGTCTATTCAGACCTGCTTTCCCAATCTAGAAGGTGGTGTGGGAATGCATGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS GCA 90 bp ATTGGGAAAGCAGGTCTGAATAGACACCACAGGGCCCTGGCAACTTaGGGTGGGACCCAGGGGCTGTACATGGCTGTTGTATCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: IGKAGLNRHHRALAT*GGTQGLYMAVVSGS
Trigger: AGAGCCTGATACAACAGCCATGTACAGCCCCTGGGTCCCACCGCAAGTTGCCAGGGCCCTGTGGTGTCTATTCAGACCTGCTTTCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS CCA 90 bp GCTGACGTCCTTACTTCATTGCTTGAGGACTGTTCCAGAGCCAGCTaGGCTCCAGGGTCCCACCTTCTTCTCTTCTCTCCCTGCCCCTAT +
Preference number: 5 (lower is better)
Translates to: ADVLTSLLEDCSRAS*APGSHLLLFSPCPY
Trigger: ATAGGGGCAGGGAGAGAAGAGAAGAAGGTGGGACCCTGGAGCCCAGCTGGCTCTGGAACAGTCCTCAAGCAATGAAGTAAGGACGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS-3UTR CAA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACCCCTCGGGAACGCGTaGCTGGGCGAAGAGGGGACA +
Preference number: 5 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQPLGNA*LGEEGT
Trigger: TGTCCCCTCTTCGCCCAGCAACGCGTTCCCGAGGGG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAAGTCTCGCGGGGGCCTaGGTTCTGCCCTCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQSLAGA*VLPSVA
Trigger: GGCCACTGAGGGCAGAACCAAGGCCCCCGCGAGACT...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACTGGCAGGTGAAGGCCTaGCCGCAGGAGCCGCACTGG +
Preference number: 5 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNWQVKA*PQEPHW
Trigger: CCAGTGCGGCTCCTGCGGCAAGGCCTTCACCTGCCA...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGAGGCGCGAGCGGCTGTaGAAGGCCTTCTCGCAGTCG +
Preference number: 5 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVRRERL*KAFSQS
Trigger: CGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCCT...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACAGGCGCGAGCGGCTGTaGAAGGCCTTCTCGCAGTCG +
Preference number: 5 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYRRERL*KAFSQS
Trigger: CGACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCCT...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTAGGTGCGAGCTCCAGTaGAACATCTCCCCACATTTC +
Preference number: 5 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGRCELQ*NISPHF
Trigger: GAAATGTGGGGAGATGTTCAACTGGAGCTCGCACCT...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CTGAGCAGGTGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCGTGCTGAGCAGGTGTTaGTTGAACTGGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LSRCLLNWMAKGFPSLCSVLSRC*LNWMAK
Trigger: CTTGGCCATCCAGTTCAACAAACACCTGCTCAGCAC...GCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp GCATGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGTGCTGAGCAGGTGTTaGTTGAACTGGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: ACRPDGGDKARLPHLEEGVLSRC*LNWMAK
Trigger: CTTGGCCATCCAGTTCAACAAACACCTGCTCAGCAC...ACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACCCACGCACAAGAGCTTaGCCACATCCAGCGCGTCGA +
Preference number: 5 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDPRTRA*PHPARR
Trigger: TCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTGG...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GCTCCTGGGCCGGTTCTTCTTTGCAAATGCCCTGCTGTTGAGAGGGCACCGCCTACCAGGGTGCTTTCCTaGTTGAGTAGCTCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: APGPVLLCKCPAVERAPPTRVLS*LSSSES
Trigger: GCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGT...AGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR CAA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCGAGGTCTCACCATGTaGTCCAGGCTGGTCCTAGAC +
Preference number: 5 (lower is better)
Translates to: QAARHVVCAEQVFVELDGRGLTM*SRLVLD
Trigger: GTCTAGGACCAGCCTGGACAACATGGTGAGACCTCG...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp TGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCTCTGGTGCCGCCTTTTCCAGGGTTaGCAAAACAGCTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: CLLNWMAKGFPSLCSLWCRLFQG*QNSSMW
Trigger: CCACATGGAGCTGTTTTGCAAACCCTGGAAAAGGCG...GCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437275.5
CDS-3UTR CAA 90 bp GGCCGTGCTGTGACAGCTGTGGGAATGCCCCTGACTGCACTGTCACTAAACACAAAACTCACCGATTCCTaGGACCTGGCTTCGGGAAGA +
Preference number: 5 (lower is better)
Translates to: GRAVTAVGMPLTALSLNTKLTDS*DLASGR
Trigger: TCTTCCCGAAGCCAGGTCCAAGGAATCGGTGAGTTT...TGTGTTTAGTGACAGTGCAGTCAGGGGCATTCCCACAGCTGTCACAGCACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400451.7
ENST00000611540.4
CDS-3UTR CAA 90 bp CTTCCTGTCTCTGAAGAGTGTTGGGACAGGGAGAGCCGCCTTTTCCAGGGTTTGACTTTTCTGGCTCACTaGGCGTGGAGGCGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: LPVSEECWDRESRLFQGLTFLAH*AWRRFP
Trigger: GGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAGT...CAAACCCTGGAAAAGGCGGCTCTCCCTGTCCCAACACTCTTCAGAGACAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CAGGCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCTGAGCAGGTGTTTGTaGAACTGGATGGCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: QAARHVVCAEQVFVELDGLSRCL*NWMAKG
Trigger: GCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG...GCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp TGTTTGTTGAACTGGATGGCCAAGGGCTTCCCCTCGCTGTGCAGCCTCTGGTGCGAAAGATCTTTCCCCTaGTCAACAACTTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: CLLNWMAKGFPSLCSLWCERSFP*STTSRP
Trigger: GGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTC...GCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp TGCAGACCTGATGGGGGTGATAAGGCAAGGCTCCCACACCTGGAGGAAGGTGGTGAAAGATCTTTCCCCTaGTCAACAACTTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: CRPDGGDKARLPHLEEGGERSFP*STTSRP
Trigger: GGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTC...ACCACCTTCCTCCAGGTGTGGGAGCCTTGCCTTATCACCCCCATCAGGTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACGCAAATGCCCTGCTGTaGAGAGGGCACCGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYANALL*RGHRLQ
Trigger: CTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGC...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGGCAAATGCCCTGCTGTaGAGAGGGCACCGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVANALL*RGHRLQ
Trigger: CTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGC...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCCCCTCGGGAACGCGTaGCTGGGCGAAGAGGGGACA +
Preference number: 5 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRPLGNA*LGEEGT
Trigger: TGTCCCCTCTTCGCCCAGCAACGCGTTCCCGAGGGG...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACGTGGCCTGGACGTTCTaGCGTGTGTCCAGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHVAWTF*RVSSKG
Trigger: ACCCTTGCTGGACACACGCAAGAACGTCCAGGCCAC...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGGTGGCCTGGACGTTCTaGCGTGTGTCCAGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVVAWTF*RVSSKG
Trigger: ACCCTTGCTGGACACACGCAAGAACGTCCAGGCCAC...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAAGTGGCCTGGACGTTCTaGCGTGTGTCCAGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQVAWTF*RVSSKG
Trigger: ACCCTTGCTGGACACACGCAAGAACGTCCAGGCCAC...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTAGTCTCGCGGGGGCCTaGGTTCTGCCCTCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFASLAGA*VLPSVA
Trigger: GGCCACTGAGGGCAGAACCAAGGCCCCCGCGAGACT...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAGTCTCGCGGGGGCCTaGGTTCTGCCCTCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRSLAGA*VLPSVA
Trigger: GGCCACTGAGGGCAGAACCAAGGCCCCCGCGAGACT...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTCGGTGCTCCAGAAGGTaGGTGCTCCAGGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSRCSRR*VLQVKA
Trigger: GGCCTTCACCTGGAGCACCAACCTTCTGGAGCACCG...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACCCACGCACAAGAGCTTaGCCACATCCAGCGCGTCGA +
Preference number: 5 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHPRTRA*PHPARR
Trigger: TCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTGG...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS CCA 90 bp GAGATTCTCTTTCAGGGAAAGAGCAGGATCCTGAGAGGAAAGAGCTaGCGAAGGAGAAATGAGTCAAGGTCACGGCTACCAGGCTCACGG +
Preference number: 5 (lower is better)
Translates to: EILFQGKSRILRGKS*RRRNESRSRLPGSR
Trigger: CCGTGAGCCTGGTAGCCGTGACCTTGACTCATTTCTCCTTCGCCAGCTCTTTCCTCTCAGGATCCTGCTCTTTCCCTGAAAGAGAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493734.5
CDS-3UTR CAA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGCCCCTCGGGAACGCGTaGCTGGGCGAAGAGGGGACA +
Preference number: 5 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKPLGNA*LGEEGT
Trigger: TGTCCCCTCTTCGCCCAGCAACGCGTTCCCGAGGGG...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAAGGTGCGAGCTCCAGTaGAACATCTCCCCACATTTC +
Preference number: 5 (lower is better)
Translates to: AARHVVCAEQVFVELDGQRCELQ*NISPHF
Trigger: GAAATGTGGGGAGATGTTCAACTGGAGCTCGCACCT...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACACCAGGGTGCTTTCCTaGTTGAGTAGCTCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYTRVLS*LSSSES
Trigger: GCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGT...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCGAGGTCTCACCATGTaGTCCAGGCTGGTCCTAGAC +
Preference number: 5 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYRGLTM*SRLVLD
Trigger: GTCTAGGACCAGCCTGGACAACATGGTGAGACCTCG...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACGAGATCACATCTGGCTaGTGCAGTGGAGGTCCTAGG +
Preference number: 5 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHEITSG*CSGGPR
Trigger: CCTAGGACCTCCACTGCACAAGCCAGATGTGATCTC...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTATGGAGGAAACTCCTGATTAAAGCCGTGTCAGGAGCCCGTCCGAGGATACAAGAGATCACATCTGGCTaGTGCAGTGGAGGTCCTAGG +
Preference number: 5 (lower is better)
Translates to: LWRKLLIKAVSGARPRIQEITSG*CSGGPR
Trigger: CCTAGGACCTCCACTGCACAAGCCAGATGTGATCTC...TTGTATCCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACACTTTTCTGGCTCACTaGGCGTGGAGGCGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHTFLAH*AWRRFP
Trigger: GGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAGT...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTCGGTGCTCCAGAAGGTaGGTGCTCCAGGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFARCSRR*VLQVKA
Trigger: GGCCTTCACCTGGAGCACCAACCTTCTGGAGCACCG...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp GCTGCCAGGCACGTAGTATGTGCTGAGCAGGTGTTTGTTGAACTGGATGGCCAAACCAGGGTGCTTTCCTaGTTGAGTAGCTCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: AARHVVCAEQVFVELDGQTRVLS*LSSSES
Trigger: GCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGT...TTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACGAAAGATCTTTCCCCTaGTCAACAACTTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDERSFP*STTSRP
Trigger: GGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTC...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GGTGATGTTGGCATGTTAGGATCTGGCTACAATGATGCTGGGCCGTGCTGTGACACACCCATCCTGATGTaGTGCCCATCTTCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: GDVGMLGSGYNDAGPCCDTPILM*CPSSLN
Trigger: ATTCAGGGAAGATGGGCACAACATCAGGATGGGTGT...GTCACAGCACGGCCCAGCATCATTGTAGCCAGATCCTAACATGCCAACATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACAAACTCACCGATTCCTaGGACCTGGCTTCGGGAAGA +
Preference number: 5 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYKLTDS*DLASGR
Trigger: TCTTCCCGAAGCCAGGTCCAAGGAATCGGTGAGTTT...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000611540.4
CDS-3UTR CAA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGAAACTCACCGATTCCTaGGACCTGGCTTCGGGAAGA +
Preference number: 5 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVKLTDS*DLASGR
Trigger: TCTTCCCGAAGCCAGGTCCAAGGAATCGGTGAGTTT...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000611540.4
CDS-3UTR CAA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATTGGCAGGTGAAGGCCTaGCCGCAGGAGCCGCACTGG +
Preference number: 5 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNWQVKA*PQEPHW
Trigger: CCAGTGCGGCTCCTGCGGCAAGGCCTTCACCTGCCA...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACAGGTGCGAGCTCCAGTaGAACATCTCCCCACATTTC +
Preference number: 5 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHRCELQ*NISPHF
Trigger: GAAATGTGGGGAGATGTTCAACTGGAGCTCGCACCT...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACGTGCTGAGCAGGTGTTaGTTGAACTGGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHVLSRC*LNWMAK
Trigger: CTTGGCCATCCAGTTCAACAAACACCTGCTCAGCAC...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACGTGCTGAGCAGGTGTTaGTTGAACTGGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: FPLSTTSRPIKENRWQDYVLSRC*LNWMAK
Trigger: CTTGGCCATCCAGTTCAACAAACACCTGCTCAGCAC...GTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTAGTGATCCCCTTGCCTaGGCCTCCCACAGTGTTAAG +
Preference number: 5 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSSDPLA*ASHSVK
Trigger: CTTAACACTGTGGGAGGCCAAGGCAAGGGGATCACT...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACAGTGATCCCCTTGCCTaGGCCTCCCACAGTGTTAAG +
Preference number: 5 (lower is better)
Translates to: FQAHQGKQVARLPQMTLNSDPLA*ASHSVK
Trigger: CTTAACACTGTGGGAGGCCAAGGCAAGGGGATCACT...GTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACCGCCTTTTCCAGGGTTaGCAAAACAGCTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: PGPSRKTGGKTTSNDSQHRLFQG*QNSSMW
Trigger: CCACATGGAGCTGTTTTGCAAACCCTGGAAAAGGCG...GTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS TCA 90 bp CCTGGGCCTGGGCATCCTGGCCACCACCCAACTCCAGACTTGCTTTaGTCCTTGAAAGGATCAAATAGATGCCAAGTAATTTCACTGCAT +
Preference number: 5 (lower is better)
Translates to: PGPGHPGHHPTPDLL*SLKGSNRCQVISLH
Trigger: ATGCAGTGAAATTACTTGGCATCTATTTGATCCTTTCAAGGATCAAAGCAAGTCTGGAGTTGGGTGGTGGCCAGGATGCCCAGGCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS-3UTR CAA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAAGGTGCGAGCTCCAGTaGAACATCTCCCCACATTTC +
Preference number: 5 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQRCELQ*NISPHF
Trigger: GAAATGTGGGGAGATGTTCAACTGGAGCTCGCACCT...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAAGACTACCTCAACCAGGGTGCTTTCCTaGTTGAGTAGCTCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: PCQQLPGPSRKTGGKTTSTRVLS*LSSSES
Trigger: GCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGT...TGAGGTAGTCTTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTGACCAGGGTGCTTTCCTaGTTGAGTAGCTCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: GKQVARLPQMTLNTPPGVTRVLS*LSSSES
Trigger: GCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGT...CACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp AGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAACAGGTGGCAACGCCTTTTCCAGGGTTaGCAAAACAGCTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: RSFPLSTTSRPIKENRWQRLFQG*QNSSMW
Trigger: CCACATGGAGCTGTTTTGCAAACCCTGGAAAAGGCG...TTGCCACCTGTTTTCCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACCGGTGCTCCAGAAGGTaGGTGCTCCAGGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHRCSRR*VLQVKA
Trigger: GGCCTTCACCTGGAGCACCAACCTTCTGGAGCACCG...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp CTCAGAAAGCAGCTACTGACACCAAAGCACATCATGTTAGTTTCGAGGTTTGCTCTGAGCAGGTGTTTGTaGAACTGGATGGCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: LRKQLLTPKHIMLVSRFALSRCL*NWMAKG
Trigger: GCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG...AGCAAACCTCGAAACTAACATGATGTGCTTTGGTGTCAGTAGCTGCTTTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357502.5
ENST00000403682.7
ENST00000437275.5
CDS-3UTR CAA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGCTGAGCAGGTGTTTGTaGAACTGGATGGCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRLSRCL*NWMAKG
Trigger: GCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAGTGATCCCCTTGCCTaGGCCTCCCACAGTGTTAAG +
Preference number: 5 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRSDPLA*ASHSVK
Trigger: CTTAACACTGTGGGAGGCCAAGGCAAGGGGATCACT...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGCGAGGTCTCACCATGTaGTCCAGGCTGGTCCTAGAC +
Preference number: 5 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKRGLTM*SRLVLD
Trigger: GTCTAGGACCAGCCTGGACAACATGGTGAGACCTCG...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGACTTTTCTGGCTCACTaGGCGTGGAGGCGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKTFLAH*AWRRFP
Trigger: GGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAGT...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCAAGGTGCGAGCTCCAGTaGAACATCTCCCCACATTTC +
Preference number: 5 (lower is better)
Translates to: VSGARPRIQQLIYLLLISRCELQ*NISPHF
Trigger: GAAATGTGGGGAGATGTTCAACTGGAGCTCGCACCT...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGGTGCTGAGCAGGTGTTaGTTGAACTGGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRVLSRC*LNWMAK
Trigger: CTTGGCCATCCAGTTCAACAAACACCTGCTCAGCAC...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGACGAGGTCTCACCATGTaGTCCAGGCTGGTCCTAGAC +
Preference number: 5 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGRGLTM*SRLVLD
Trigger: GTCTAGGACCAGCCTGGACAACATGGTGAGACCTCG...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GAGCCAGGGAGGACCAGGGTGCTTTCCTTGTTGAGTAGCTCAGAAAGCAGCTACCCGAGGATACAACAGTaGATATACCTCCTTTTAATT +
Preference number: 5 (lower is better)
Translates to: EPGRTRVLSLLSSSESSYPRIQQ*IYLLLI
Trigger: AATTAAAAGGAGGTATATCAACTGTTGTATCCTCGG...GTAGCTGCTTTCTGAGCTACTCAACAAGGAAAGCACCCTGGTCCTCCCTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATATAATAATGTTCACTGGACTGAGCAGGTGTTTGTaGAACTGGATGGCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: CPPPKIILLSSNIIMFTGLSRCL*NWMAKG
Trigger: GCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAG...TCCAGTGAACATTATTATATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGGAAAGATCTTTCCCCTaGTCAACAACTTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FIGKKDLSPCQQLPGPSRERSFP*STTSRP
Trigger: GGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTC...CCTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCAACACCCATCCTGATGTaGTGCCCATCTTCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: VSGARPRIQQLIYLLLISTPILM*CPSSLN
Trigger: ATTCAGGGAAGATGGGCACAACATCAGGATGGGTGT...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS TCA 90 bp CCCAGGGGCTGTACATGGCTGTTGTATCAGGCTCTAAGTCCTGGGTaGGATGCTATGCTTCCTGGAGTCAAGAATTTCAAACTTAAAAAT +
Preference number: 5 (lower is better)
Translates to: PRGCTWLLYQALSPG*DAMLPGVKNFKLKN
Trigger: ATTTTTAAGTTTGAAATTCTTGACTCCAGGAAGCATAGCATCTCACCCAGGACTTAGAGCCTGATACAACAGCCATGTACAGCCCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS-3UTR CAA 90 bp AGCTATTTACATGAGTTAAGTCCAGGAAATTCACTTTTTCCAAATGCCCACCACACTTTTCTGGCTCACTaGGCGTGGAGGCGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: SYLHELSPGNSLFPNAHHTFLAH*AWRRFP
Trigger: GGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAGT...GTGGTGGGCATTTGGAAAAAGTGAATTTCCTGGACTTAACTCATGTAAATAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGGAAAGATCTTTCCCCTaGTCAACAACTTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKERSFP*STTSRP
Trigger: GGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTC...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp TTTTATTGGCAAGAAAGATCTTTCCCCTTGTCAACAACTTCCAGGCCCATCAAGACACCCATCCTGATGTaGTGCCCATCTTCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: FYWQERSFPLSTTSRPIKTPILM*CPSSLN
Trigger: ATTCAGGGAAGATGGGCACAACATCAGGATGGGTGT...CTTGATGGGCCTGGAAGTTGTTGACAAGGGGAAAGATCTTTCTTGCCAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp AGGAAAACAGGTGGCAAGACTACCTCAAATGACTCTCAACACTCCTCCTGGAGTCCGAGGATACAACAGTaGATATACCTCCTTTTAATT +
Preference number: 5 (lower is better)
Translates to: RKTGGKTTSNDSQHSSWSPRIQQ*IYLLLI
Trigger: AATTAAAAGGAGGTATATCAACTGTTGTATCCTCGG...ACTCCAGGAGGAGTGTTGAGAGTCATTTGAGGTAGTCTTGCCACCTGTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp GTGTCAGGAGCCCGTCCGAGGATACAACAGTTGATATACCTCCTTTTAATTTCACCGAGGATACAACAGTaGATATACCTCCTTTTAATT +
Preference number: 5 (lower is better)
Translates to: VSGARPRIQQLIYLLLISPRIQQ*IYLLLI
Trigger: AATTAAAAGGAGGTATATCAACTGTTGTATCCTCGG...TGAAATTAAAAGGAGGTATATCAACTGTTGTATCCTCGGACGGGCTCCTGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS-3UTR CAA 90 bp AAATTCACTTTTTCCAAATGCCCACCACCCAAGATTATTCTCCTCTCTAGCAATCCGAGGATACAACAGTaGATATACCTCCTTTTAATT +
Preference number: 5 (lower is better)
Translates to: KFTFSKCPPPKIILLSSNPRIQQ*IYLLLI
Trigger: AATTAAAAGGAGGTATATCAACTGTTGTATCCTCGG...ATTGCTAGAGAGGAGAATAATCTTGGGTGGTGGGCATTTGGAAAAAGTGAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400451.7
ENST00000437275.5
ENST00000611540.4
CDS TCA 72 bp GACAGGTCCCGAAGCGGACAGAGACCGCCGACGGTCTaGGGGACCGGCAAGTGGACAGACCGGACTCCCACA +
Preference number: 6 (lower is better)
Translates to: DRSRSGQRPPTV*GTGKWTDRTPT
Trigger: TGTGGGAGTCCGGTCTGTCCACTTGCCGGTCCCTCAGACCGTCGGCGGTCTCTGTCCGCTTCGGGACCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357502.5
ENST00000400451.7
ENST00000403682.7
ENST00000420626.1
ENST00000493734.5
ENST00000611540.4
CDS GCA 72 bp GGACTGCGACTGCCACAAAGAGCAGCAGGCGGCCGCTaGGGGAAAGCGCGCCTGCGCGAAATAGGCGCAAAC +
Preference number: 6 (lower is better)
Translates to: GLRLPQRAAGGR*GKARLREIGAN
Trigger: GTTTGCGCCTATTTCGCGCAGGCGCGCTTTCCCGCAGCGGCCGCCTGCTGCTCTTTGTGGCAGTCGCAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611540.4
CDS CCA 72 bp CCAAGCAAGGATGCTACCAGCTCCCACGCTGTCCCTTaGGGACTTCTGGCGTGGCCGAGGCCCCTGGCCATG +
Preference number: 6 (lower is better)
Translates to: PSKDATSSHAVP*GLLAWPRPLAM
Trigger: CATGGCCAGGGGCCTCGGCCACGCCAGAAGTCCCCAAGGGACAGCGTGGGAGCTGGTAGCATCCTTGCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS GCA 72 bp CCGGCAAGTGGACAGACCGGACTCCCACAAAAGGACTaGGACTGCCACAAAGAGCAGCAGGCGGCCGCTGCG +
Preference number: 6 (lower is better)
Translates to: PASGQTGLPQKD*DCHKEQQAAAA
Trigger: CGCAGCGGCCGCCTGCTGCTCTTTGTGGCAGTCGCAGTCCTTTTGTGGGAGTCCGGTCTGTCCACTTGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403682.7
ENST00000611540.4
CDS CAA 72 bp ACCAAGCAAGGATGCTACCAGCTCCCACGCTGTCCCTaGGGGACTTCTGGCGTGGCCGAGGCCCCTGGCCAT +
Preference number: 6 (lower is better)
Translates to: TKQGCYQLPRCP*GTSGVAEAPGH
Trigger: ATGGCCAGGGGCCTCGGCCACGCCAGAAGTCCCCAAGGGACAGCGTGGGAGCTGGTAGCATCCTTGCTTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS GCA 72 bp AGTGGACAGACCGGACTCCCACAAAAGGACTGCGACTaGCACAAAGAGCAGCAGGCGGCCGCTGCGGGAAAG +
Preference number: 6 (lower is better)
Translates to: SGQTGLPQKDCD*HKEQQAAAAGK
Trigger: CTTTCCCGCAGCGGCCGCCTGCTGCTCTTTGTGGCAGTCGCAGTCCTTTTGTGGGAGTCCGGTCTGTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403682.7
ENST00000611540.4
CDS CCA 72 bp TGCAGTGGAGGTCCTGCTCGTGGAGAGAAAGTGGGCTaGGCATGCTGCAGCTCTCCAGGCCCAGTCGACCTT +
Preference number: 6 (lower is better)
Translates to: CSGGPARGEKVG*ACCSSPGPVDL
Trigger: AAGGTCGACTGGGCCTGGAGAGCTGCAGCATGCCCAGCCCACTTTCTCTCCACGAGCAGGACCTCCACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS GCA 72 bp GCAGGTCTGAATAGACACCACAGGGCCCTGGCAACTTaGGGTGGGACCCAGGGGCTGTACATGGCTGTTGTA +
Preference number: 6 (lower is better)
Translates to: AGLNRHHRALAT*GGTQGLYMAVV
Trigger: TACAACAGCCATGTACAGCCCCTGGGTCCCACCGCAAGTTGCCAGGGCCCTGTGGTGTCTATTCAGACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS CAA 90 bp CATGATGGGCTCCTGGGCCGGTTCTTCTTTGCAAATGCCCTGCTGTaGAGAGGGCACCGCCTTCAGCTCCCATTCTGTCTTCTCGGGCTC +
Preference number: 6 (lower is better)
Translates to: HDGLLGRFFFANALL*RGHRLQLPFCLLGL
Trigger: GAGCCCGAGAAGACAGAATGGGAGCTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGAGCCCATCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420626.1
CDS TCA 72 bp TCCTGGGCCGGTTCTTCTTTGCAAATGCCCTGCTGTTaGGAGGGCACCGCCTTCAGCTCCCATTCTAGGGCA +
Preference number: 6 (lower is better)
Translates to: SWAGSSLQMPCC*EGTAFSSHSRA
Trigger: TGCCCTAGAATGGGAGCTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405993.2
CDS TCA 72 bp TCCTGGGCCGGTTCTTCTTTGCAAATGCCCTGCTGTTaGGAGGGCACCGCCTTCAGCTCCCATTCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: SWAGSSLQMPCC*EGTAFSSHSVF
Trigger: GAAGACAGAATGGGAGCTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420626.1
CDS TCA 72 bp GCTACCCCCAATCAAGCACGTCTGAGTGGGAACAAATaGTTGGGCGCGGGGAAGAAAGAAGCAGGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: ATPNQARLSGNK*LGAGKKEAGGQ
Trigger: CTGGCCTCCTGCTTCTTTCTTCCCCGCGCCCAATCATTTGTTCCCACTCAGACGTGCTTGATTGGGGGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493734.5
CDS TCA 72 bp ACGGCTGAGCTTAAAGCCCACCTGTCGTGGCACAAGTaGGAATCAGAGAGGAGGCAGAACCTGCCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: TAELKAHLSWHK*ESERRQNLPAR
Trigger: CCTTGCTGGCAGGTTCTGCCTCCTCTCTGATTCTCACTTGTGCCACGACAGGTGGGCTTTAAGCTCAGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493734.5
CDS CAA 72 bp CTCCTGGGCCGGTTCTTCTTTGCAAATGCCCTGCTGTaGAGAGGGCACCGCCTTCAGCTCCCATTCTGTCTT +
Preference number: 6 (lower is better)
Translates to: LLGRFFFANALL*RGHRLQLPFCL
Trigger: AAGACAGAATGGGAGCTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420626.1
CDS CAA 90 bp TATACTCTGAAGACCCCACGTGTGCTGACGTCCTTACTTCATTGCTaGAGGACTGTTCCAGAGCCAGCTGGGCTCCAGGGTCCCACCTTC +
Preference number: 6 (lower is better)
Translates to: YTLKTPRVLTSLLHC*RTVPEPAGLQGPTF
Trigger: GAAGGTGGGACCCTGGAGCCCAGCTGGCTCTGGAACAGTCCTCAAGCAATGAAGTAAGGACGTCAGCACACGTGGGGTCTTCAGAGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS CCA 72 bp CTTACTTCATTGCTTGAGGACTGTTCCAGAGCCAGCTaGGCTCCAGGGTCCCACCTTCTTCTCTTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: LTSLLEDCSRAS*APGSHLLLFSP
Trigger: GGGAGAGAAGAGAAGAAGGTGGGACCCTGGAGCCCAGCTGGCTCTGGAACAGTCCTCAAGCAATGAAGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS TCA 72 bp ATTCCCACACCACCTTCTAGATTGGGAAAGCAGGTCTaGATAGACACCACAGGGCCCTGGCAACTTGCGGTG +
Preference number: 6 (lower is better)
Translates to: IPTPPSRLGKQV*IDTTGPWQLAV
Trigger: CACCGCAAGTTGCCAGGGCCCTGTGGTGTCTATTCAGACCTGCTTTCCCAATCTAGAAGGTGGTGTGGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS TCA 72 bp TCTCTGGGAACAGGAGGTCCTCTGGGCCAAAAGCAGTaGGGGTCTCAGACTGGAACCCAAATCCCAGTGTAT +
Preference number: 6 (lower is better)
Translates to: SLGTGGPLGQKQ*GSQTGTQIPVY
Trigger: ATACACTGGGATTTGGGTTCCAGTCTGAGACCCTCACTGCTTTTGGCCCAGAGGACCTCCTGTTCCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS GCA 72 bp TGTGTCTCAGACACTCCAATTCATGACGAAAAGAGCTaGTACCCCCAATCAAGCACGTCTGAGTGGGAACAA +
Preference number: 6 (lower is better)
Translates to: CVSDTPIHDEKS*YPQSSTSEWEQ
Trigger: TTGTTCCCACTCAGACGTGCTTGATTGGGGGTAGCAGCTCTTTTCGTCATGAATTGGAGTGTCTGAGACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493734.5
CDS CCA 72 bp GGGCTGTACATGGCTGTTGTATCAGGCTCTAAGTCCTaGGTGAGATGCTATGCTTCCTGGAGTCAAGAATTT +
Preference number: 6 (lower is better)
Translates to: GLYMAVVSGSKS*VRCYASWSQEF
Trigger: AAATTCTTGACTCCAGGAAGCATAGCATCTCACCCAGGACTTAGAGCCTGATACAACAGCCATGTACAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS CCA 72 bp CATATAGGTTCTCACCCAGGACTGATTCTGTGTCCATaGTTCCAAAGGAGCCAGAGATTGATTAAGGACCCT +
Preference number: 6 (lower is better)
Translates to: HIGSHPGLILCP*FQRSQRLIKDP
Trigger: AGGGTCCTTAATCAATCTCTGGCTCCTTTGGAACCATGGACACAGAATCAGTCCTGGGTGAGAACCTATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS CAA 90 bp CGATCCCAGACTAGAAACTGTTATTACACTCTAAGGAAGGAAACCTaGTATATATCAGCAAGTTCTGTGCCCCAAGGGACTAAGAGAGGC +
Preference number: 6 (lower is better)
Translates to: RSQTRNCYYTLRKET*YISASSVPQGTKRG
Trigger: GCCTCTCTTAGTCCCTTGGGGCACAGAACTTGCTGATATATACAAGGTTTCCTTCCTTAGAGTGTAATAACAGTTTCTAGTCTGGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476678.1
CDS CAA 72 bp ACTAGAAACTGTTATTACACTCTAAGGAAGGAAACCTaGTATATATCAGCAAGTTCTGTGCCCCAAGGGACT +
Preference number: 6 (lower is better)
Translates to: TRNCYYTLRKET*YISASSVPQGT
Trigger: AGTCCCTTGGGGCACAGAACTTGCTGATATATACAAGGTTTCCTTCCTTAGAGTGTAATAACAGTTTCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476678.1