RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF736 (Homo sapiens)

Ensembl gene IDs: ENSG00000234444

Ensembl transcript IDs: ENST00000423484.3

Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTTGGTCTGCTGGCCTCTCCCAGGGACCCAGTCTGGCCACAGCTaGTTACAGGGCAGTCTCAGGTACCCTGGAAGCTCATACCAGAGC +
Preference number: 1 (lower is better)
Translates to: SLVCWPLPGTQSGHS*LQGSLRYPGSSYQS
Trigger: GCTCTGGTATGAGCTTCCAGGGTACCTGAGACTGCCCTGTAAGCAGCTGTGGCCAGACTGGGTCCCTGGGAGAGGCCAGCAGACCAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 90 bp GACCCAGTCTGGCCACAGCTGCTTACAGGGCAGTCTCAGGTACCCTaGAAGCTCATACCAGAGCATCTGCACTGGAGGGACATGCCTGAC +
Preference number: 1 (lower is better)
Translates to: DPVWPQLLTGQSQVP*KLIPEHLHWRDMPD
Trigger: GTCAGGCATGTCCCTCCAGTGCAGATGCTCTGGTATGAGCTTCCAGGGTACCTGAGACTGCCCTGTAAGCAGCTGTGGCCAGACTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 90 bp GATGGTCTTGCAAATCAGAAGAAGCTGGTCCAACTGAGCACTCCTTaGTCTGCTGGCCTCTCCCAGGGACCCAGTCTGGCCACAGCTGCT +
Preference number: 1 (lower is better)
Translates to: DGLANQKKLVQLSTP*SAGLSQGPSLATAA
Trigger: AGCAGCTGTGGCCAGACTGGGTCCCTGGGAGAGGCCAGCAGACCAAGGAGTGCTCAGTTGGACCAGCTTCTTCTGATTTGCAAGACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 90 bp CCTTCAACAGGGGCTTCCAGCTACCTCCTACAGGTGCTTTTGGGCTaGCAACAGGTCTATACCTCCCTGGGATGGCGCTCCCAGAGAAAA +
Preference number: 1 (lower is better)
Translates to: PSTGASSYLLQVLLG*QQVYTSLGWRSQRK
Trigger: TTTTCTCTGGGAGCGCCATCCCAGGGAGGTATAGACCTGTTGCCAGCCCAAAAGCACCTGTAGGAGGTAGCTGGAAGCCCCTGTTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 90 bp AGCAGGTATCCCCCACTCCCTTCCCAGCTGCTTTGCTCCTGCCACTaGGGTGAGTACCCAAAGACAGGCAGAAATCCCATATCCACTAGC +
Preference number: 1 (lower is better)
Translates to: SRYPPLPSQLLCSCH*GEYPKTGRNPISTS
Trigger: GCTAGTGGATATGGGATTTCTGCCTGTCTTTGGGTACTCACCTCAGTGGCAGGAGCAAAGCAGCTGGGAAGGGAGTGGGGGATACCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 90 bp ACCCTGGAAGCTCATACCAGAGCATCTGCACTGGAGGGACATGCCTaGCTCATGAAGAGCTCCAGCAAAGCAGCCCCTATGACTGCACCA +
Preference number: 1 (lower is better)
Translates to: TLEAHTRASALEGHA*LMKSSSKAAPMTAP
Trigger: TGGTGCAGTCATAGGGGCTGCTTTGCTGGAGCTCTTCATGAGTCAGGCATGTCCCTCCAGTGCAGATGCTCTGGTATGAGCTTCCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 90 bp AGGTACCCTGGAAGCTCATACCAGAGCATCTGCACTGGAGGGACATaGCTGACTCATGAAGAGCTCCAGCAAAGCAGCCCCTATGACTGC +
Preference number: 1 (lower is better)
Translates to: RYPGSSYQSICTGGT*LTHEELQQSSPYDC
Trigger: GCAGTCATAGGGGCTGCTTTGCTGGAGCTCTTCATGAGTCAGGCATGTCCCTCCAGTGCAGATGCTCTGGTATGAGCTTCCAGGGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 90 bp TGGCTTAGATTCCAGCCAACCATTGGTAGCAGCACTGCACCTCCCTaGGATGGAGCTACCAGAAAGAGGAGTGGGCCACCATCTTTGCTG +
Preference number: 1 (lower is better)
Translates to: WLRFQPTIGSSTAPP*DGATRKRSGPPSLL
Trigger: CAGCAAAGATGGTGGCCCACTCCTCTTTCTGGTAGCTCCATCCCAGGGAGGTGCAGTGCTGCTACCAATGGTTGGCTGGAATCTAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 90 bp AATTTCTGCAGGATGGTCTTGCAAATCAGAAGAAGCTGGTCCAACTaGGCACTCCTTGGTCTGCTGGCCTCTCCCAGGGACCCAGTCTGG +
Preference number: 1 (lower is better)
Translates to: NFCRMVLQIRRSWSN*ALLGLLASPRDPVW
Trigger: CCAGACTGGGTCCCTGGGAGAGGCCAGCAGACCAAGGAGTGCTCAGTTGGACCAGCTTCTTCTGATTTGCAAGACCATCCTGCAGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 90 bp ACATGCCTGACTCATGAAGAGCTCCAGCAAAGCAGCCCCTATGACTaGACCAGCCCACATTTCTTCCCCATACTGCAGCTTCCCGTGACA +
Preference number: 1 (lower is better)
Translates to: TCLTHEELQQSSPYD*TSPHFFPILQLPVT
Trigger: TGTCACGGGAAGCTGCAGTATGGGGAAGAAATGTGGGCTGGTGCAGTCATAGGGGCTGCTTTGCTGGAGCTCTTCATGAGTCAGGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 90 bp TTACAGGGCAGTCTCAGGTACCCTGGAAGCTCATACCAGAGCATCTaGACTGGAGGGACATGCCTGACTCATGAAGAGCTCCAGCAAAGC +
Preference number: 1 (lower is better)
Translates to: LQGSLRYPGSSYQSI*TGGTCLTHEELQQS
Trigger: GCTTTGCTGGAGCTCTTCATGAGTCAGGCATGTCCCTCCAGTGCAGATGCTCTGGTATGAGCTTCCAGGGTACCTGAGACTGCCCTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 90 bp GGGTCTCCAGCTACCACCACCAGCGCTCTTTGGTTGATGGAGTTTTaGAACCTCTTTGGGATACAGTTCCTAGAGGGAGGAGTGAGCTGC +
Preference number: 1 (lower is better)
Translates to: GSPATTTSALWLMEF*NLFGIQFLEGGVSC
Trigger: GCAGCTCACTCCTCCCTCTAGGAACTGTATCCCAAAGAGGTTTCAAAACTCCATCAACCAAAGAGCGCTGGTGGTGGTAGCTGGAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 90 bp GGTCTATACCTCCCTGGGATGGCGCTCCCAGAGAAAAGGGCATGCTaGCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAG +
Preference number: 1 (lower is better)
Translates to: GLYLPGMALPEKRAC*HCCCFAAFSGDNFQ
Trigger: CTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGCAGCATGCCCTTTTCTCTGGGAGCGCCATCCCAGGGAGGTATAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 90 bp CTCCCTGGGATGGCGCTCCCAGAGAAAAGGGCATGCTGCCATTGTTaGTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAA +
Preference number: 1 (lower is better)
Translates to: LPGMALPEKRACCHC*CFAAFSGDNFQYWK
Trigger: TTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGCAGCATGCCCTTTTCTCTGGGAGCGCCATCCCAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 90 bp ACCAGCCCACATTTCTTCCCCATACTGCAGCTTCCCGTGACACCATaGCAACTCCTGATATTTCTTTGCTGGCACATGTCTGCAAAGGCA +
Preference number: 1 (lower is better)
Translates to: TSPHFFPILQLPVTP*QLLIFLCWHMSAKA
Trigger: TGCCTTTGCAGACATGTGCCAGCAAAGAAATATCAGGAGTTGCCATGGTGTCACGGGAAGCTGCAGTATGGGGAAGAAATGTGGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 90 bp GTGAGTACCCAAAGACAGGCAGAAATCCCATATCCACTAGCACTCTaGTCCAGCTATGGCACCTTCATCCCACAAACTCGCAAACTCCAA +
Preference number: 1 (lower is better)
Translates to: VSTQRQAEIPYPLAL*SSYGTFIPQTRKLQ
Trigger: TTGGAGTTTGCGAGTTTGTGGGATGAAGGTGCCATAGCTGGAGCAGAGTGCTAGTGGATATGGGATTTCTGCCTGTCTTTGGGTACTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 90 bp GAGACTTTAGCCCTACGGGAACTGTTGGGCCTAATTTCTGCAGGATaGTCTTGCAAATCAGAAGAAGCTGGTCCAACTGAGCACTCCTTG +
Preference number: 1 (lower is better)
Translates to: ETLALRELLGLISAG*SCKSEEAGPTEHSL
Trigger: CAAGGAGTGCTCAGTTGGACCAGCTTCTTCTGATTTGCAAGACCATCCTGCAGAAATTAGGCCCAACAGTTCCCGTAGGGCTAAAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 90 bp TTCTCCCACAGATCTCTGCAACCTTCAGGTGAGGAGATACCCTCATaGACCCACTTCACCAAGGCCTTCAGTTTAACACACAGAGCTACA +
Preference number: 1 (lower is better)
Translates to: FSHRSLQPSGEEIPS*THFTKAFSLTHRAT
Trigger: TGTAGCTCTGTGTGTTAAACTGAAGGCCTTGGTGAAGTGGGTTCATGAGGGTATCTCCTCACCTGAAGGTTGCAGAGATCTGTGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 90 bp GATCTCCTAGCACAGTACAGGTGCTCTAAAAAGACATGGCCAGACTaGCTGTTAAAGCAGGTCCCCCGTTTCATTCCTTCTCACTGGAAA +
Preference number: 1 (lower is better)
Translates to: DLLAQYRCSKKTWPD*LLKQVPRFIPSHWK
Trigger: TTTCCAGTGAGAAGGAATGAAACGGGGGACCTGCTTTAACAGGCAGTCTGGCCATGTCTTTTTAGAGCACCTGTACTGTGCTAGGAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 90 bp CAGATAAGCCACTTAGGCCTGCGCAGATTCAAGAGCCTTAGATACTaGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAACTCGAGCAAA +
Preference number: 1 (lower is better)
Translates to: QISHLGLRRFKSLRY*LSRLPRKSSCNSSK
Trigger: TTTGCTCGAGTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCAGTATCTAAGGCTCTTGAATCTGCGCAGGCCTAAGTGGCTTATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 90 bp TGGCTTTGGAGAATCCAAATAAACTGGGGGTGGAAGTGGTACCTCTaGATAGCAGAGCTGTCCTGCAAAAATATGGCTAGACTGCTTTCT +
Preference number: 1 (lower is better)
Translates to: WLWRIQINWGWKWYL*IAELSCKNMARLLS
Trigger: AGAAAGCAGTCTAGCCATATTTTTGCAGGACAGCTCTGCTATTCAGAGGTACCACTTCCACCCCCAGTTTATTTGGATTCTCCAAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 90 bp ACAGTTCCTAGAGGGAGGAGTGAGCTGCCATTTTTGCTGTTTGTGTaGGTTAGCTGTTCCAGCCTTCTGGCTTTGGAGAATCCAAATAAA +
Preference number: 1 (lower is better)
Translates to: TVPRGRSELPFLLFV*VSCSSLLALENPNK
Trigger: TTTATTTGGATTCTCCAAAGCCAGAAGGCTGGAACAGCTAACTCACACAAACAGCAAAAATGGCAGCTCACTCCTCCCTCTAGGAACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CAA 90 bp GGATGGTCTTGCAAATCAGAAGAAGCTGGTCCAACTGAGCACTCCTaGGTCTGCTGGCCTCTCCCAGGGACCCAGTCTGGCCACAGCTGC +
Preference number: 2 (lower is better)
Translates to: GWSCKSEEAGPTEHS*VCWPLPGTQSGHSC
Trigger: GCAGCTGTGGCCAGACTGGGTCCCTGGGAGAGGCCAGCAGACCAAGGAGTGCTCAGTTGGACCAGCTTCTTCTGATTTGCAAGACCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR TCA 90 bp GTAGATGAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGGCAGCCTCTGAGTTGTaGGCTGAGCATTGCCCACCC +
Preference number: 2 (lower is better)
Translates to: VDETLVGREPENSTPAFVAASEL*AEHCPP
Trigger: GGGTGGGCAATGCTCAGCTCACAACTCAGAGGCTGC...CACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTCATCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR TCA 90 bp AGAGATAATGCAGCAAGCCAGCTCATGTGGTGGCCAGAGGGTTTGGTGCAAGAGCTCCTGCCACTGAGGTaGGTACCCAAAGACAGGCAG +
Preference number: 2 (lower is better)
Translates to: RDNAASQLMWWPEGLVQELLPLR*VPKDRQ
Trigger: CTGCCTGTCTTTGGGTACTCACCTCAGTGGCAGGAG...CTCTTGCACCAAACCCTCTGGCCACCACATGAGCTGGCTTGCTGCATTATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CAA 90 bp ATGCCTCACGTGGTAAGACCTACTGGCTTAGATTCCAGCCAACCATaGGTAGCAGCACTGCACCTCCCTGGGATGGAGCTACCAGAAAGA +
Preference number: 2 (lower is better)
Translates to: MPHVVRPTGLDSSQP*VAALHLPGMELPER
Trigger: TCTTTCTGGTAGCTCCATCCCAGGGAGGTGCAGTGCTGCTACCAATGGTTGGCTGGAATCTAAGCCAGTAGGTCTTACCACGTGAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CCA 90 bp CAAACTGCAGTTTACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACTCAGGGCCTCAAGACTaGCTTTCTGAAATCAGACAG +
Preference number: 2 (lower is better)
Translates to: QTAVYPRRGSQPILHGSHSGPQD*LSEIRQ
Trigger: CTGTCTGATTTCAGAAAGCCAGTCTTGAGGCCCTGA...GTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGTAAACTGCAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CAA 90 bp AGGGTCTCCAGCTACCACCACCAGCGCTCTTTGGTTGATGGAGTTTaGAAACCTCTTTGGGATACAGTTCCTAGAGGGAGGAGTGAGCTG +
Preference number: 2 (lower is better)
Translates to: RVSSYHHQRSLVDGV*KPLWDTVPRGRSEL
Trigger: CAGCTCACTCCTCCCTCTAGGAACTGTATCCCAAAGAGGTTTCAAAACTCCATCAACCAAAGAGCGCTGGTGGTGGTAGCTGGAGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR TCA 90 bp ACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACAAACTACCCACTGTCAAGACTGGCTTTCTaGAATCAGACAGACAAGAAC +
Preference number: 2 (lower is better)
Translates to: TQGEEASPSSMGPTNYPLSRLAF*NQTDKN
Trigger: GTTCTTGTCTGTCTGATTTCAGAAAGCCAGTCTTGA...CAGTGGGTAGTTTGTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR GCA 90 bp ACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACAAACTACCCACTGCTCCTGATATTTCTTTaGTGGCACATGTCTGCAAAG +
Preference number: 2 (lower is better)
Translates to: TQGEEASPSSMGPTNYPLLLIFL*WHMSAK
Trigger: CTTTGCAGACATGTGCCAGCAAAGAAATATCAGGAG...CAGTGGGTAGTTTGTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CCA 90 bp GTAGATGAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGGCCAGAGAACACAGTTaGGGCTCAAAACAAGTCCCC +
Preference number: 2 (lower is better)
Translates to: VDETLVGREPENSTPAFVAREHS*GSKQVP
Trigger: GGGGACTTGTTTTGAGCCCCAACTGTGTTCTCTGGC...CACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTCATCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CCA 90 bp TGGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAACTCGAGCAAAGCAGGTTACTATACCTCCCTGGGATaGCGCTCCCAGAGAAAAGGG +
Preference number: 2 (lower is better)
Translates to: WLSRLPRKSSCNSSKAGYYTSLG*RSQRKG
Trigger: CCCTTTTCTCTGGGAGCGCCATCCCAGGGAGGTATA...GTAACCTGCTTTGCTCGAGTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR TCA 90 bp TGGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAACTCGAGCAAAGCAGGTTACCTGGGCTGGCTGCACTaGGTAATTGCTGACCTACAT +
Preference number: 2 (lower is better)
Translates to: WLSRLPRKSSCNSSKAGYLGWLH*VIADLH
Trigger: ATGTAGGTCAGCAATTACTCAGTGCAGCCAGCCCAG...GTAACCTGCTTTGCTCGAGTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CAA 90 bp CAACTCCTGATATTTCTTTGCTGGCACATGTCTGCAAAGGCAGGTTaGGCTTTGCTTGCCCCACCAGCAAATGGGAATGCAATATGCCCC +
Preference number: 2 (lower is better)
Translates to: QLLIFLCWHMSAKAG*ALLAPPANGNAICP
Trigger: GGGGCATATTGCATTCCCATTTGCTGGTGGGGCAAGCAAAGCCAAACCTGCCTTTGCAGACATGTGCCAGCAAAGAAATATCAGGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR GCA 90 bp TGGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAACTCGAGCAAAGCAGGTTACAGGTTTGGCTTTGCTTaGCCCACCAGCAAATGGGAA +
Preference number: 2 (lower is better)
Translates to: WLSRLPRKSSCNSSKAGYRFGFA*PTSKWE
Trigger: TTCCCATTTGCTGGTGGGGCAAGCAAAGCCAAACCT...GTAACCTGCTTTGCTCGAGTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR GCA 90 bp TGGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAACTCGAGCAAAGCAGGTTACTACATCTCTCTGAGATaGAGCCCCCAGAAGACAAGC +
Preference number: 2 (lower is better)
Translates to: WLSRLPRKSSCNSSKAGYYISLR*SPQKTS
Trigger: GCTTGTCTTCTGGGGGCTGCATCTCAGAGAGATGTA...GTAACCTGCTTTGCTCGAGTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CAA 90 bp GGATGGCGCTCCCAGAGAAAAGGGCATGCTGCCATTGTTGCTGTTTaGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAATCTGAG +
Preference number: 2 (lower is better)
Translates to: GWRSQRKGHAAIVAV*QHSVVITSSTGKSE
Trigger: CTCAGATTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGCAGCATGCCCTTTTCTCTGGGAGCGCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR GCA 90 bp AGAGATAATGCAGCAAGCCAGCTCATGTGGTGGCCAGAGGGTTTGGTGCAAGAGTATGATGCAAGAGATTaGCTGAAAGTGATGGGGAGA +
Preference number: 2 (lower is better)
Translates to: RDNAASQLMWWPEGLVQEYDARD*LKVMGR
Trigger: TCTCCCCATCACTTTCAGGCAATCTCTTGCATCATA...CTCTTGCACCAAACCCTCTGGCCACCACATGAGCTGGCTTGCTGCATTATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CCA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAACAACTGAGCACTCCTTaGTCTGCTGGCCTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKQLSTP*SAGLSQ
Trigger: CTGGGAGAGGCCAGCAGACCAAGGAGTGCTCAGTTG...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CCA 90 bp CAAACTGCAGTTTACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACAGTAAACCCCTAACTTaGCCAAAAGTAAAGATCTTC +
Preference number: 2 (lower is better)
Translates to: QTAVYPRRGSQPILHGSHSKPLT*PKVKIF
Trigger: GAAGATCTTTACTTTTGGCCAAGTTAGGGGTTTACT...GTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGTAAACTGCAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CCA 90 bp TGGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAACTCGAGCAAAGCAGGTTACTCCTACAGGTGCTTTTaGGCTGGCAACAGGTCTATA +
Preference number: 2 (lower is better)
Translates to: WLSRLPRKSSCNSSKAGYSYRCF*AGNRSI
Trigger: TATAGACCTGTTGCCAGCCCAAAAGCACCTGTAGGA...GTAACCTGCTTTGCTCGAGTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CCA 90 bp TGGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAACTCGAGCAAAGCAGGTTACTCATGTTTTCCTCACTaGGTAGGACCTTCAACAGGG +
Preference number: 2 (lower is better)
Translates to: WLSRLPRKSSCNSSKAGYSCFPH*VGPSTG
Trigger: CCCTGTTGAAGGTCCTACCCAGTGAGGAAAACATGA...GTAACCTGCTTTGCTCGAGTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CAA 90 bp AAGTACTTCCCAATGAGGGTCTCCAGCTACCACCACCAGCGCTCTTaGGTTGATGGAGTTTTGAAACCTCTTTGGGATACAGTTCCTAGA +
Preference number: 2 (lower is better)
Translates to: KYFPMRVSSYHHQRS*VDGVLKPLWDTVPR
Trigger: TCTAGGAACTGTATCCCAAAGAGGTTTCAAAACTCCATCAACCAAAGAGCGCTGGTGGTGGTAGCTGGAGACCCTCATTGGGAAGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR GCA 90 bp GAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGCTAACAACAAAGCCTGTTGGCTaGATCCATCTTATACCACAA +
Preference number: 2 (lower is better)
Translates to: ETLVGREPENSTPAFVLTTKPVG*IHLIPQ
Trigger: TTGTGGTATAAGATGGATGCAGCCAACAGGCTTTGT...TGTTAGCACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CCA 90 bp TTCCTTCTCACTGGAAAGTACTTCCCAATGAGGGTCTCCAGCTACCACCACCAGCAAATGCAGGAAATGTaGAGAACCCCAGTAAGATAC +
Preference number: 2 (lower is better)
Translates to: FLLTGKYFPMRVSSYHHQQMQEM*RTPVRY
Trigger: GTATCTTACTGGGGTTCTCCACATTTCCTGCATTTG...CTGGTGGTGGTAGCTGGAGACCCTCATTGGGAAGTACTTTCCAGTGAGAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CCA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAAAGCCAGCTCATGTGGTaGCCAGAGGGTTTGGTGCAA +
Preference number: 2 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKSQLMW*PEGLVQ
Trigger: TTGCACCAAACCCTCTGGCCACCACATGAGCTGGCT...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR GCA 90 bp GTAGATGAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGGTTACAAAAGTAATTTaGAACCCAATGCAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: VDETLVGREPENSTPAFVVTKVI*NPMQGR
Trigger: CCTCCCTTGCATTGGGTTGCAAATTACTTTTGTAAC...CACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTCATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR GCA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAATCATACCAGAGCATCTaGACTGGAGGGACATGCCTG +
Preference number: 2 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKSYQSI*TGGTCL
Trigger: CAGGCATGTCCCTCCAGTGCAGATGCTCTGGTATGA...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR GCA 90 bp TTCCTTCTCACTGGAAAGTACTTCCCAATGAGGGTCTCCAGCTACCACCACCAGCAGTACAACTGTCCTTaGTACCCTCAGACTAATAAA +
Preference number: 2 (lower is better)
Translates to: FLLTGKYFPMRVSSYHHQQYNCP*YPQTNK
Trigger: TTTATTAGTCTGAGGGTAGCAAGGACAGTTGTACTG...CTGGTGGTGGTAGCTGGAGACCCTCATTGGGAAGTACTTTCCAGTGAGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR TCA 90 bp GAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGCTAACACTTCTTTCATCCAAATaGCCAAATTACATTTCCAGC +
Preference number: 2 (lower is better)
Translates to: ETLVGREPENSTPAFVLTLLSSK*PNYISS
Trigger: GCTGGAAATGTAATTTGGTCATTTGGATGAAAGAAG...TGTTAGCACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR TCA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAACATTGCCAGAGCTATTaGGCCAGTAGCAGCTTAGCA +
Preference number: 2 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKHCQSY*ASSSLA
Trigger: TGCTAAGCTGCTACTGGCTCAATAGCTCTGGCAATG...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CCA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAAACTCTGCTCCAGCTATaGCACCTTCATCCCACAAAC +
Preference number: 2 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKTLLQL*HLHPTN
Trigger: GTTTGTGGGATGAAGGTGCCATAGCTGGAGCAGAGT...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR TCA 90 bp ATACCCCAGGAGAAGGTCATCCTCAAGACACATAATCATGAGATTCTCCAGGGTCAGACAAGCAAATGCTaGGAAAATGTTACCACAGGA +
Preference number: 2 (lower is better)
Translates to: IPQEKVILKTHNHEILQGQTSKC*ENVTTG
Trigger: TCCTGTGGTAACATTTTCTCAGCATTTGCTTGTCTG...ACCCTGGAGAATCTCATGATTATGTGTCTTGAGGATGACCTTCTCCTGGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR GCA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAAGTTGGGCCTAATTTCTaGAGGATGGTCTTGCAAATC +
Preference number: 2 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKVGPNF*RMVLQI
Trigger: GATTTGCAAGACCATCCTGCAGAAATTAGGCCCAAC...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR GCA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAAATCCCAAACCCTAAGTaGCTTATTCACACCTCAAAC +
Preference number: 2 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKIPNPK*LIHTSN
Trigger: GTTTGAGGTGTGAATAAGGCACTTAGGGTTTGGGAT...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CCA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAACTGATATTTCTTTGCTaGCACATGTCTGCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKLIFLC*HMSAKA
Trigger: TGCCTTTGCAGACATGTGCCAGCAAAGAAATATCAG...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR TCA 90 bp AAGCCCAAAGGTCAGCAACCTCAAAGATATGCCCACAAAGATAAGACACAATCAAAGAAACCAAATCTATaGTGCAAGAGATTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: KPKGQQPQRYAHKDKTQSKKPNL*CKRLPE
Trigger: TTCAGGCAATCTCTTGCATCATAGATTTGGTTTCTT...TGATTGTGTCTTATCTTTGTGGGCATATCTTTGAGGTTGCTGACCTTTGGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 72 bp TCAGAAGAAGCTGGTCCAACTGAGCACTCCTTGGTCTaGTGGCCTCTCCCAGGGACCCAGTCTGGCCACAGC +
Preference number: 3 (lower is better)
Translates to: SEEAGPTEHSLV*WPLPGTQSGHS
Trigger: GCTGTGGCCAGACTGGGTCCCTGGGAGAGGCCAGCAGACCAAGGAGTGCTCAGTTGGACCAGCTTCTTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp GGGGCTTCCAGCTACCTCCTACAGGTGCTTTTGGGCTaGCAACAGGTCTATACCTCCCTGGGATGGCGCTCC +
Preference number: 3 (lower is better)
Translates to: GASSYLLQVLLG*QQVYTSLGWRS
Trigger: GGAGCGCCATCCCAGGGAGGTATAGACCTGTTGCCAGCCCAAAAGCACCTGTAGGAGGTAGCTGGAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp GCAAATCAGAAGAAGCTGGTCCAACTGAGCACTCCTTaGTCTGCTGGCCTCTCCCAGGGACCCAGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: ANQKKLVQLSTP*SAGLSQGPSLA
Trigger: GGCCAGACTGGGTCCCTGGGAGAGGCCAGCAGACCAAGGAGTGCTCAGTTGGACCAGCTTCTTCTGATTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp AGGTGCTTTTGGGCTGGCAACAGGTCTATACCTCCCTaGGATGGCGCTCCCAGAGAAAAGGGCATGCTGCCA +
Preference number: 3 (lower is better)
Translates to: RCFWAGNRSIPP*DGAPREKGMLP
Trigger: TGGCAGCATGCCCTTTTCTCTGGGAGCGCCATCCCAGGGAGGTATAGACCTGTTGCCAGCCCAAAAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp TTCCAGCCAACCATTGGTAGCAGCACTGCACCTCCCTaGGATGGAGCTACCAGAAAGAGGAGTGGGCCACCA +
Preference number: 3 (lower is better)
Translates to: FQPTIGSSTAPP*DGATRKRSGPP
Trigger: TGGTGGCCCACTCCTCTTTCTGGTAGCTCCATCCCAGGGAGGTGCAGTGCTGCTACCAATGGTTGGCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CAA 90 bp CAAACTGCAGTTTACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACTCTGCAAAGGCAGGTTaGGCTTTGCTTGCCCCACCA +
Preference number: 3 (lower is better)
Translates to: QTAVYPRRGSQPILHGSHSAKAG*ALLAPP
Trigger: TGGTGGGGCAAGCAAAGCCAAACCTGCCTTTGCAGA...GTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGTAAACTGCAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 72 bp CCCCCACTCCCTTCCCAGCTGCTTTGCTCCTGCCACTaGGGTGAGTACCCAAAGACAGGCAGAAATCCCATA +
Preference number: 3 (lower is better)
Translates to: PPLPSQLLCSCH*GEYPKTGRNPI
Trigger: TATGGGATTTCTGCCTGTCTTTGGGTACTCACCTCAGTGGCAGGAGCAAAGCAGCTGGGAAGGGAGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 72 bp AGGCCCGGGCCACTAGCCAATCATTGCCAGAGCTATTaGGCCAGTAGCAGCTTAGCAACTCCCTGGACAGAG +
Preference number: 3 (lower is better)
Translates to: RPGPLANHCQSY*ASSSLATPWTE
Trigger: CTCTGTCCAGGGAGTTGCTAAGCTGCTACTGGCTCAATAGCTCTGGCAATGATTGGCTAGTGGCCCGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 72 bp CCAGCCCATCCTCCATGGGTCCCACAAACTACCCACTaGTCCTCAGCAGACAGTAAACCCCTAACTTGGCCA +
Preference number: 3 (lower is better)
Translates to: PAHPPWVPQTTH*SSADSKPLTWP
Trigger: TGGCCAAGTTAGGGGTTTACTGTCTGCTGAGGAGCAGTGGGTAGTTTGTGGGACCCATGGAGGATGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 72 bp GACCTTCAACAGGGGCTTCCAGCTACCTCCTACAGGTaGTTTTGGGCTGGCAACAGGTCTATACCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: DLQQGLPATSYR*FWAGNRSIPPW
Trigger: CCAGGGAGGTATAGACCTGTTGCCAGCCCAAAAGCACCTGTAGGAGGTAGCTGGAAGCCCCTGTTGAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp AGTTTACCCAAGGAGAGGAAGCCAGCCCATCCTCCATaGGTCCCACAAACTACCCACTGCTCCTCAGCAGAC +
Preference number: 3 (lower is better)
Translates to: SLPKERKPAHPP*VPQTTHCSSAD
Trigger: GTCTGCTGAGGAGCAGTGGGTAGTTTGTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGTAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 72 bp GCTCATACCAGAGCATCTGCACTGGAGGGACATGCCTaGCTCATGAAGAGCTCCAGCAAAGCAGCCCCTATG +
Preference number: 3 (lower is better)
Translates to: AHTRASALEGHA*LMKSSSKAAPM
Trigger: CATAGGGGCTGCTTTGCTGGAGCTCTTCATGAGTCAGGCATGTCCCTCCAGTGCAGATGCTCTGGTATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp CTTTTGGGCTGGCAACAGGTCTATACCTCCCTGGGATaGCGCTCCCAGAGAAAAGGGCATGCTGCCATTGTT +
Preference number: 3 (lower is better)
Translates to: LLGWQQVYTSLG*RSQRKGHAAIV
Trigger: AACAATGGCAGCATGCCCTTTTCTCTGGGAGCGCCATCCCAGGGAGGTATAGACCTGTTGCCAGCCCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CAA 90 bp TGGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAACTCGAGCAAAGCAGGTTACCCAACTGAGCACTCCTaGGTCTGCTGGCCTCTCCCA +
Preference number: 3 (lower is better)
Translates to: WLSRLPRKSSCNSSKAGYPTEHS*VCWPLP
Trigger: TGGGAGAGGCCAGCAGACCAAGGAGTGCTCAGTTGG...GTAACCTGCTTTGCTCGAGTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 72 bp AGTCTCAGGTACCCTGGAAGCTCATACCAGAGCATCTaGACTGGAGGGACATGCCTGACTCATGAAGAGCTC +
Preference number: 3 (lower is better)
Translates to: SLRYPGSSYQSI*TGGTCLTHEEL
Trigger: GAGCTCTTCATGAGTCAGGCATGTCCCTCCAGTGCAGATGCTCTGGTATGAGCTTCCAGGGTACCTGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp ATGCAGCAAGCCAGCTCATGTGGTGGCCAGAGGGTTTaGTGCAAGAGCATCTGTAGTAAAGTGTGGCCAGTG +
Preference number: 3 (lower is better)
Translates to: MQQASSCGGQRV*CKSICSKVWPV
Trigger: CACTGGCCACACTTTACTACAGATGCTCTTGCACCAAACCCTCTGGCCACCACATGAGCTGGCTTGCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CAA 90 bp AGAGATAATGCAGCAAGCCAGCTCATGTGGTGGCCAGAGGGTTTGGTGCAAGAGAGCCAGAGAACACAGTaGGGGCTCAAAACAAGTCCC +
Preference number: 3 (lower is better)
Translates to: RDNAASQLMWWPEGLVQESQRTQ*GLKTSP
Trigger: GGGACTTGTTTTGAGCCCCAACTGTGTTCTCTGGCT...CTCTTGCACCAAACCCTCTGGCCACCACATGAGCTGGCTTGCTGCATTATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 72 bp GAGGTGACTAGAAACTGTAGTGGACACCCAGCATACTaGAGCAGCCCTTCAGAAGTGGTCGGACTGTTACGT +
Preference number: 3 (lower is better)
Translates to: EVTRNCSGHPAY*SSPSEVVGLLR
Trigger: ACGTAACAGTCCGACCACTTCTGAAGGGCTGCTGCAGTATGCTGGGTGTCCACTACAGTTTCTAGTCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 72 bp GAGCTACCAGAAAGAGGAGTGGGCCACCATCTTTGCTaGTTGAGCAACTTAGCCATTCCAGCCTTCAGGCTT +
Preference number: 3 (lower is better)
Translates to: ELPERGVGHHLC*LSNLAIPAFRL
Trigger: AAGCCTGAAGGCTGGAATGGCTAAGTTGCTCAAGCAGCAAAGATGGTGGCCCACTCCTCTTTCTGGTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CAA 90 bp AGTATCCTGCCCCAAGCCAACACCACCTTTAGTGCAACAGCACACAGCCTCCAGCAGGAACAAAGCCTGTaGGCTGCATCCATCTTATAC +
Preference number: 3 (lower is better)
Translates to: SILPQANTTFSATAHSLQQEQSL*AASILY
Trigger: GTATAAGATGGATGCAGCCAACAGGCTTTGTTCCTG...CTGGAGGCTGTGTGCTGTTGCACTAAAGGTGGTGTTGGCTTGGGGCAGGATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 72 bp GAGGGTCTCCAGCTACCACCACCAGCGCTCTTTGGTTaGTGGAGTTTTGAAACCTCTTTGGGATACAGTTCC +
Preference number: 3 (lower is better)
Translates to: EGLQLPPPALFG*WSFETSLGYSS
Trigger: GGAACTGTATCCCAAAGAGGTTTCAAAACTCCATCAACCAAAGAGCGCTGGTGGTGGTAGCTGGAGACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 72 bp CCAGAAAACTCCACCCCTGCCTTTGTGCTAACACTGTaGAGAGAACAGGGTAACCTCCCACACTCTGAACAA +
Preference number: 3 (lower is better)
Translates to: PENSTPAFVLTL*REQGNLPHSEQ
Trigger: TTGTTCAGAGTGTGGGAGGTTACCCTGTTCTCTGCACAGTGTTAGCACAAAGGCAGGGGTGGAGTTTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 72 bp TTTGCTGGCACATGTCTGCAAAGGCAGGTTTGGCTTTaGTTGCCCCACCAGCAAATGGGAATGCAATATGCC +
Preference number: 3 (lower is better)
Translates to: FAGTCLQRQVWL*LPHQQMGMQYA
Trigger: GGCATATTGCATTCCCATTTGCTGGTGGGGCAAGCAAAGCCAAACCTGCCTTTGCAGACATGTGCCAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 72 bp ATGGCAACTCCTGATATTTCTTTGCTGGCACATGTCTaGAAAGGCAGGTTTGGCTTTGCTTGCCCCACCAGC +
Preference number: 3 (lower is better)
Translates to: MATPDISLLAHV*KGRFGFACPTS
Trigger: GCTGGTGGGGCAAGCAAAGCCAAACCTGCCTTTGCAGACATGTGCCAGCAAAGAAATATCAGGAGTTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp GCCCTACGGGAACTGTTGGGCCTAATTTCTGCAGGATaGTCTTGCAAATCAGAAGAAGCTGGTCCAACTGAG +
Preference number: 3 (lower is better)
Translates to: ALRELLGLISAG*SCKSEEAGPTE
Trigger: CTCAGTTGGACCAGCTTCTTCTGATTTGCAAGACCATCCTGCAGAAATTAGGCCCAACAGTTCCCGTAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp ACCCACTGCTCCTCAGCAGACAGTAAACCCCTAACTTaGCCAAAAGTAAAGATCTTCCATCCTGGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: THCSSADSKPLT*PKVKIFHPGLA
Trigger: AGCCAGCCCAGGATGGAAGATCTTTACTTTTGGCCAAGTTAGGGGTTTACTGTCTGCTGAGGAGCAGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp GATCTCCTAGCACAGTACAGGTGCTCTAAAAAGACATaGCCAGACTGCCTGTTAAAGCAGGTCCCCCGTTTC +
Preference number: 3 (lower is better)
Translates to: DLLAQYRCSKKT*PDCLLKQVPRF
Trigger: GAAACGGGGGACCTGCTTTAACAGGCAGTCTGGCCATGTCTTTTTAGAGCACCTGTACTGTGCTAGGAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 72 bp ATCCCAAACCCTAAGTGCCTTATTCACACCTCAAACTaGAGTTTACCCAAGGAGAGGAAGCCAGCCCATCCT +
Preference number: 3 (lower is better)
Translates to: IPNPKCLIHTSN*SLPKERKPAHP
Trigger: AGGATGGGCTGGCTTCCTCTCCTTGGGTAAACTGCAGTTTGAGGTGTGAATAAGGCACTTAGGGTTTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp CCCGTGACACCATGGCAACTCCTGATATTTCTTTGCTaGCACATGTCTGCAAAGGCAGGTTTGGCTTTGCTT +
Preference number: 3 (lower is better)
Translates to: PVTPWQLLIFLC*HMSAKAGLALL
Trigger: AAGCAAAGCCAAACCTGCCTTTGCAGACATGTGCCAGCAAAGAAATATCAGGAGTTGCCATGGTGTCACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp ACCCACTTCAACAATGCCTCACGTGGTAAGACCTACTaGCTTAGATTCCAGCCAACCATTGGTAGCAGCACT +
Preference number: 3 (lower is better)
Translates to: THFNNASRGKTY*LRFQPTIGSST
Trigger: AGTGCTGCTACCAATGGTTGGCTGGAATCTAAGCCAGTAGGTCTTACCACGTGAGGCATTGTTGAAGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp CACTTAGGCCTGCGCAGATTCAAGAGCCTTAGATACTaGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAAC +
Preference number: 3 (lower is better)
Translates to: HLGLRRFKSLRY*LSRLPRKSSCN
Trigger: GTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCAGTATCTAAGGCTCTTGAATCTGCGCAGGCCTAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 72 bp AGAGGGAGGAGTGAGCTGCCATTTTTGCTGTTTGTGTaGGTTAGCTGTTCCAGCCTTCTGGCTTTGGAGAAT +
Preference number: 3 (lower is better)
Translates to: RGRSELPFLLFV*VSCSSLLALEN
Trigger: ATTCTCCAAAGCCAGAAGGCTGGAACAGCTAACTCACACAAACAGCAAAAATGGCAGCTCACTCCTCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 72 bp ATACAGTTCCTAGAGGGAGGAGTGAGCTGCCATTTTTaGTGTTTGTGTGAGTTAGCTGTTCCAGCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: IQFLEGGVSCHF*CLCELAVPAFW
Trigger: CCAGAAGGCTGGAACAGCTAACTCACACAAACAGCAAAAATGGCAGCTCACTCCTCCCTCTAGGAACTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp TATTTCTTTGCTGGCACATGTCTGCAAAGGCAGGTTTaGCTTTGCTTGCCCCACCAGCAAATGGGAATGCAA +
Preference number: 3 (lower is better)
Translates to: YFFAGTCLQRQV*LCLPHQQMGMQ
Trigger: TTGCATTCCCATTTGCTGGTGGGGCAAGCAAAGCCAAACCTGCCTTTGCAGACATGTGCCAGCAAAGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CCA 72 bp CATTTCTTCCCCATACTGCAGCTTCCCGTGACACCATaGCAACTCCTGATATTTCTTTGCTGGCACATGTCT +
Preference number: 3 (lower is better)
Translates to: HFFPILQLPVTP*QLLIFLCWHMS
Trigger: AGACATGTGCCAGCAAAGAAATATCAGGAGTTGCCATGGTGTCACGGGAAGCTGCAGTATGGGGAAGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 72 bp CTCTTTGGGATACAGTTCCTAGAGGGAGGAGTGAGCTaGCATTTTTGCTGTTTGTGTGAGTTAGCTGTTCCA +
Preference number: 3 (lower is better)
Translates to: LFGIQFLEGGVS*HFCCLCELAVP
Trigger: TGGAACAGCTAACTCACACAAACAGCAAAAATGGCAGCTCACTCCTCCCTCTAGGAACTGTATCCCAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 72 bp AGAATCCAAATAAACTGGGGGTGGAAGTGGTACCTCTaGATAGCAGAGCTGTCCTGCAAAAATATGGCTAGA +
Preference number: 3 (lower is better)
Translates to: RIQINWGWKWYL*IAELSCKNMAR
Trigger: TCTAGCCATATTTTTGCAGGACAGCTCTGCTATTCAGAGGTACCACTTCCACCCCCAGTTTATTTGGATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 72 bp AGTAGGTTCCCTTTAGAGAAAAGTGATCGAGATTGCTaGCTAGAAGCAGCTAGACTGTGCAGTTCTCATAGA +
Preference number: 3 (lower is better)
Translates to: SRFPLEKSDRDC*LEAARLCSSHR
Trigger: TCTATGAGAACTGCACAGTCTAGCTGCTTCTAGTCAGCAATCTCGATCACTTTTCTCTAAAGGGAACCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR GCA 72 bp GAAGCAGCTAGACTGTGCAGTTCTCATAGACAGGAATaGAAGGTATACATAAATACAGCACCTGCAACTGAA +
Preference number: 3 (lower is better)
Translates to: EAARLCSSHRQE*KVYINTAPATE
Trigger: TTCAGTTGCAGGTGCTGTATTTATGTATACCTTGCATTCCTGTCTATGAGAACTGCACAGTCTAGCTGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR-3UTR CAA 90 bp TTTCCAGCAAGGCCTAAGATGACAGAAGTAGAATTCAGAATATGGGTAGAAACAAGTTACAAAAGTAATTaGCAACCCAATGCAAGGGAG +
Preference number: 3 (lower is better)
Translates to: FPARPKMTEVEFRIWVETSYKSN*QPNARE
Trigger: CTCCCTTGCATTGGGTTGCAAATTACTTTTGTAACT...TGTTTCTACCCATATTCTGAATTCTACTTCTGTCATCTTAGGCCTTGCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR TCA 72 bp AGTAGAATTCAGAATATGGGTAGAAACAAACTTCACTaGGTTACAAAAGTAATTTGCAACCCAATGCAAGGG +
Preference number: 3 (lower is better)
Translates to: SRIQNMGRNKLH*VTKVICNPMQG
Trigger: CCCTTGCATTGGGTTGCAAATTACTTTTGTAACTCAGTGAAGTTTGTTTCTACCCATATTCTGAATTCTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp CACTCCTTGGTCTGCTGGCCTCTCCCAGGGACCCAGTCTGGCCACAGCTGCTTACCCAGGGACCCAGTCTaGCCACAGCTGCTTACAGGG +
Preference number: 4 (lower is better)
Translates to: HSLVCWPLPGTQSGHSCLPRDPV*PQLLTG
Trigger: CCCTGTAAGCAGCTGTGGCCAGACTGGGTCCCTGGG...TAAGCAGCTGTGGCCAGACTGGGTCCCTGGGAGAGGCCAGCAGACCAAGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp CACTCCTTGGTCTGCTGGCCTCTCCCAGGGACCCAGTCTGGCCACAGCTGCTTAGGACACCCAGCATACTaGAGCAGCCCTTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: HSLVCWPLPGTQSGHSCLGHPAY*SSPSEV
Trigger: CACTTCTGAAGGGCTGCTGCAGTATGCTGGGTGTCC...TAAGCAGCTGTGGCCAGACTGGGTCCCTGGGAGAGGCCAGCAGACCAAGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp CAAACTGCAGTTTACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACCTGGGAGGTGGAGGCTaGAGCGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: QTAVYPRRGSQPILHGSHLGGGG*SEPRSH
Trigger: GTGTGATCTTGGCTCGCTGCAGCCTCCACCTCCCAG...GTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGTAAACTGCAGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp ACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACAAACTACCCACTGCAAGGACAGGCGCGGTaGCTCACATGTGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: TQGEEASPSSMGPTNYPLQGQAR*LTCAFP
Trigger: TGGGAATGCACATGTGAGCCACCGCGCCTGTCCTTG...CAGTGGGTAGTTTGTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp ACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACAAACTACCCACTGGCACACCAGCTTGGGTaGCAGAGCAAGAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: TQGEEASPSSMGPTNYPLAHQLG*QSKSPS
Trigger: AGATGGACTCTTGCTCTGTCACCCAAGCTGGTGTGC...CAGTGGGTAGTTTGTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp AGAGATAATGCAGCAAGCCAGCTCATGTGGTGGCCAGAGGGTTTGGTGCAAGAGGAGCACTCCTTGGTCTaGTGGCCTCTCCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: RDNAASQLMWWPEGLVQEEHSLV*WPLPGT
Trigger: GGTCCCTGGGAGAGGCCAGCAGACCAAGGAGTGCTC...CTCTTGCACCAAACCCTCTGGCCACCACATGAGCTGGCTTGCTGCATTATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CAA 72 bp TGCAAATCAGAAGAAGCTGGTCCAACTGAGCACTCCTaGGTCTGCTGGCCTCTCCCAGGGACCCAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: CKSEEAGPTEHS*VCWPLPGTQSG
Trigger: GCCAGACTGGGTCCCTGGGAGAGGCCAGCAGACCAAGGAGTGCTCAGTTGGACCAGCTTCTTCTGATTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp CAAACTGCAGTTTACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACACCAGCAAATGGGAATaGAATATGCCCCGCCACCCC +
Preference number: 4 (lower is better)
Translates to: QTAVYPRRGSQPILHGSHTSKWE*NMPRHP
Trigger: GGGGTGGCGGGGCATATTGCATTCCCATTTGCTGGT...GTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGTAAACTGCAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp CACTCCTTGGTCTGCTGGCCTCTCCCAGGGACCCAGTCTGGCCACAGCTGCTTAATGAAAAGAACCAGCTaGGTGTTTGGCTACTGCCTC +
Preference number: 4 (lower is better)
Translates to: HSLVCWPLPGTQSGHSCLMKRTS*VFGYCL
Trigger: GAGGCAGTAGCCAAACACCCAGCTGGTTCTTTTCAT...TAAGCAGCTGTGGCCAGACTGGGTCCCTGGGAGAGGCCAGCAGACCAAGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp AGTATCCTGCCCCAAGCCAACACCACCTTTAGTGCAACAGCACACAGCCTCCAGGCAAGCCAGCTCATGTaGTGGCCAGAGGGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: SILPQANTTFSATAHSLQASQLM*WPEGLV
Trigger: CACCAAACCCTCTGGCCACCACATGAGCTGGCTTGC...CTGGAGGCTGTGTGCTGTTGCACTAAAGGTGGTGTTGGCTTGGGGCAGGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp AGAGATAATGCAGCAAGCCAGCTCATGTGGTGGCCAGAGGGTTTGGTGCAAGAGGGCAGGAGAATTGCTTaGACCTGGGAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RDNAASQLMWWPEGLVQEGRRIA*TWEVEA
Trigger: AGCCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCC...CTCTTGCACCAAACCCTCTGGCCACCACATGAGCTGGCTTGCTGCATTATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp AGTATCCTGCCCCAAGCCAACACCACCTTTAGTGCAACAGCACACAGCCTCCAGCTGCAAAGGCAGGTTTaGCTTTGCTTGCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: SILPQANTTFSATAHSLQLQRQV*LCLPHQ
Trigger: CTGGTGGGGCAAGCAAAGCCAAACCTGCCTTTGCAG...CTGGAGGCTGTGTGCTGTTGCACTAAAGGTGGTGTTGGCTTGGGGCAGGATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp TTCCTTCTCACTGGAAAGTACTTCCCAATGAGGGTCTCCAGCTACCACCACCAGAGCTTAGCAACTCCCTaGACAGAGCCTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: FLLTGKYFPMRVSSYHHQSLATP*TEPPGA
Trigger: GGCCCCTGGAGGCTCTGTCCAGGGAGTTGCTAAGCT...CTGGTGGTGGTAGCTGGAGACCCTCATTGGGAAGTACTTTCCAGTGAGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CAA 72 bp GCTGGCACATGTCTGCAAAGGCAGGTTTGGCTTTGCTaGCCCCACCAGCAAATGGGAATGCAATATGCCCCG +
Preference number: 4 (lower is better)
Translates to: AGTCLQRQVWLC*PHQQMGMQYAP
Trigger: CGGGGCATATTGCATTCCCATTTGCTGGTGGGGCAAGCAAAGCCAAACCTGCCTTTGCAGACATGTGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp TGGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAACTCGAGCAAAGCAGGTTACGCAGCCTCTGAGTTGTaGGCTGAGCATTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: WLSRLPRKSSCNSSKAGYAASEL*AEHCPP
Trigger: GGGTGGGCAATGCTCAGCTCACAACTCAGAGGCTGC...GTAACCTGCTTTGCTCGAGTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp AGTATCCTGCCCCAAGCCAACACCACCTTTAGTGCAACAGCACACAGCCTCCAGGAAAGTACTTCCCAATaGGGGTCTCCAGCTACCACC +
Preference number: 4 (lower is better)
Translates to: SILPQANTTFSATAHSLQESTSQ*GSPATT
Trigger: GGTGGTAGCTGGAGACCCTCATTGGGAAGTACTTTC...CTGGAGGCTGTGTGCTGTTGCACTAAAGGTGGTGTTGGCTTGGGGCAGGATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp AGTATCCTGCCCCAAGCCAACACCACCTTTAGTGCAACAGCACACAGCCTCCAGTCATACCAGAGCATCTaGACTGGAGGGACATGCCTG +
Preference number: 4 (lower is better)
Translates to: SILPQANTTFSATAHSLQSYQSI*TGGTCL
Trigger: CAGGCATGTCCCTCCAGTGCAGATGCTCTGGTATGA...CTGGAGGCTGTGTGCTGTTGCACTAAAGGTGGTGTTGGCTTGGGGCAGGATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp TTCCTTCTCACTGGAAAGTACTTCCCAATGAGGGTCTCCAGCTACCACCACCAGGCCTCCAGGGGCCTCTaGAGTACAACTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: FLLTGKYFPMRVSSYHHQASRGL*STTVLA
Trigger: AGCAAGGACAGTTGTACTGCAGAGGCCCCTGGAGGC...CTGGTGGTGGTAGCTGGAGACCCTCATTGGGAAGTACTTTCCAGTGAGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp ACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACAAACTACCCACTGCCCAGAAAAAGTAGCTaGAACTCGAGCAAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TQGEEASPSSMGPTNYPLPRKSS*NSSKAG
Trigger: ACCTGCTTTGCTCGAGTTGCAGCTACTTTTTCTGGG...CAGTGGGTAGTTTGTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp AGAGATAATGCAGCAAGCCAGCTCATGTGGTGGCCAGAGGGTTTGGTGCAAGAGTATACCTCCCTGGGATaGCGCTCCCAGAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: RDNAASQLMWWPEGLVQEYTSLG*RSQRKG
Trigger: CCCTTTTCTCTGGGAGCGCCATCCCAGGGAGGTATA...CTCTTGCACCAAACCCTCTGGCCACCACATGAGCTGGCTTGCTGCATTATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CAA 72 bp GTGGTAAGACCTACTGGCTTAGATTCCAGCCAACCATaGGTAGCAGCACTGCACCTCCCTGGGATGGAGCTA +
Preference number: 4 (lower is better)
Translates to: VVRPTGLDSSQP*VAALHLPGMEL
Trigger: TAGCTCCATCCCAGGGAGGTGCAGTGCTGCTACCAATGGTTGGCTGGAATCTAAGCCAGTAGGTCTTACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp GTAGATGAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGAGCACTTTGGAAGGCTaGGGTGGGTGGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: VDETLVGREPENSTPAFVSTLEG*GGWIMR
Trigger: CCTCATGATCCACCCACCTCAGCCTTCCAAAGTGCT...CACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTCATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp AGAGATAATGCAGCAAGCCAGCTCATGTGGTGGCCAGAGGGTTTGGTGCAAGAGTGCACTGGAGGGACATaGCTGACTCATGAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RDNAASQLMWWPEGLVQECTGGT*LTHEEL
Trigger: GAGCTCTTCATGAGTCAGGCATGTCCCTCCAGTGCA...CTCTTGCACCAAACCCTCTGGCCACCACATGAGCTGGCTTGCTGCATTATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp ACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACAAACTACCCACTGTCTGCAGGATGGTCTTaGAAATCAGAAGAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TQGEEASPSSMGPTNYPLSAGWS*KSEEAG
Trigger: ACCAGCTTCTTCTGATTTGCAAGACCATCCTGCAGA...CAGTGGGTAGTTTGTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp GAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGCTAACAAGCCAGCTCATGTGGTaGCCAGAGGGTTTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: ETLVGREPENSTPAFVLTSQLMW*PEGLVQ
Trigger: TTGCACCAAACCCTCTGGCCACCACATGAGCTGGCT...TGTTAGCACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp ACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACAAACTACCCACTGCCAGCCTTCTGGCTTTaGAGAATCCAAATAAACTGG +
Preference number: 4 (lower is better)
Translates to: TQGEEASPSSMGPTNYPLPAFWL*RIQINW
Trigger: CCAGTTTATTTGGATTCTCCAAAGCCAGAAGGCTGG...CAGTGGGTAGTTTGTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp AGTATCCTGCCCCAAGCCAACACCACCTTTAGTGCAACAGCACACAGCCTCCAGTACAGCACCTGCAACTaGAACATCCAGGTACTTGCA +
Preference number: 4 (lower is better)
Translates to: SILPQANTTFSATAHSLQYSTCN*NIQVLA
Trigger: TGCAAGTACCTGGATGTTTCAGTTGCAGGTGCTGTA...CTGGAGGCTGTGTGCTGTTGCACTAAAGGTGGTGTTGGCTTGGGGCAGGATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp CAAACTGCAGTTTACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACTTTGTGCTAACACTGTaGAGAGAACAGGGTAACCTC +
Preference number: 4 (lower is better)
Translates to: QTAVYPRRGSQPILHGSHFVLTL*REQGNL
Trigger: GAGGTTACCCTGTTCTCTGCACAGTGTTAGCACAAA...GTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGTAAACTGCAGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp AGAGATAATGCAGCAAGCCAGCTCATGTGGTGGCCAGAGGGTTTGGTGCAAGAGTACATCTCTCTGAGATaGAGCCCCCAGAAGACAAGC +
Preference number: 4 (lower is better)
Translates to: RDNAASQLMWWPEGLVQEYISLR*SPQKTS
Trigger: GCTTGTCTTCTGGGGGCTGCATCTCAGAGAGATGTA...CTCTTGCACCAAACCCTCTGGCCACCACATGAGCTGGCTTGCTGCATTATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp CACTCCTTGGTCTGCTGGCCTCTCCCAGGGACCCAGTCTGGCCACAGCTGCTTATGTCACTTACGATACTaGTGTAAACTAATAAGTGGC +
Preference number: 4 (lower is better)
Translates to: HSLVCWPLPGTQSGHSCLCHLRY*CKLISG
Trigger: GCCACTTATTAGTTTACAGCAGTATCGTAAGTGACA...TAAGCAGCTGTGGCCAGACTGGGTCCCTGGGAGAGGCCAGCAGACCAAGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp ACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACAAACTACCCACTGCTGATATTTCTTTGCTaGCACATGTCTGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: TQGEEASPSSMGPTNYPLLIFLC*HMSAKA
Trigger: TGCCTTTGCAGACATGTGCCAGCAAAGAAATATCAG...CAGTGGGTAGTTTGTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp TGGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAACTCGAGCAAAGCAGGTTACTGCACCTCCCTGGGATaGAGCTACCAGAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: WLSRLPRKSSCNSSKAGYCTSLG*SYQKEE
Trigger: CTCCTCTTTCTGGTAGCTCCATCCCAGGGAGGTGCA...GTAACCTGCTTTGCTCGAGTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp ATACCCCAGGAGAAGGTCATCCTCAAGACACATAATCATGAGATTCTCCAGGGTCTCCTGCCACTGAGGTaGGTACCCAAAGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: IPQEKVILKTHNHEILQGLLPLR*VPKDRQ
Trigger: CTGCCTGTCTTTGGGTACTCACCTCAGTGGCAGGAG...ACCCTGGAGAATCTCATGATTATGTGTCTTGAGGATGACCTTCTCCTGGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp TTCCTTCTCACTGGAAAGTACTTCCCAATGAGGGTCTCCAGCTACCACCACCAGCATTGCCAGAGCTATTaGGCCAGTAGCAGCTTAGCA +
Preference number: 4 (lower is better)
Translates to: FLLTGKYFPMRVSSYHHQHCQSY*ASSSLA
Trigger: TGCTAAGCTGCTACTGGCTCAATAGCTCTGGCAATG...CTGGTGGTGGTAGCTGGAGACCCTCATTGGGAAGTACTTTCCAGTGAGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp ATACCCCAGGAGAAGGTCATCCTCAAGACACATAATCATGAGATTCTCCAGGGTCAGTCTGGCCACAGCTaGTTACAGGGCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: IPQEKVILKTHNHEILQGQSGHS*LQGSLR
Trigger: CCTGAGACTGCCCTGTAAGCAGCTGTGGCCAGACTG...ACCCTGGAGAATCTCATGATTATGTGTCTTGAGGATGACCTTCTCCTGGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp GAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGCTAACATCTCCCACAGATCTCTaGAACCTTCAGGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ETLVGREPENSTPAFVLTSPTDL*NLQVRR
Trigger: TCTCCTCACCTGAAGGTTGCAGAGATCTGTGGGAGA...TGTTAGCACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp TTCCTTCTCACTGGAAAGTACTTCCCAATGAGGGTCTCCAGCTACCACCACCAGACTCTGCTCCAGCTATaGCACCTTCATCCCACAAAC +
Preference number: 4 (lower is better)
Translates to: FLLTGKYFPMRVSSYHHQTLLQL*HLHPTN
Trigger: GTTTGTGGGATGAAGGTGCCATAGCTGGAGCAGAGT...CTGGTGGTGGTAGCTGGAGACCCTCATTGGGAAGTACTTTCCAGTGAGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp CTAGAGAGAAAGGCCAGGTCACCTCTAAAAAGAAGCTCATCAGGAAAACAACAACACTCCTTGGTCTGCTaGCCTCTCCCAGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: LERKARSPLKRSSSGKQQHSLVC*PLPGTQ
Trigger: CTGGGTCCCTGGGAGAGGCCAGCAGACCAAGGAGTG...TTGTTGTTTTCCTGATGAGCTTCTTTTTAGAGGTGACCTGGCCTTTCTCTCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp TGGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAACTCGAGCAAAGCAGGTTACAGCAAGGCAGGACAATaGGCCACCTGGGAACAACAT +
Preference number: 4 (lower is better)
Translates to: WLSRLPRKSSCNSSKAGYSKAGQ*ATWEQH
Trigger: ATGTTGTTCCCAGGTGGCCCATTGTCCTGCCTTGCT...GTAACCTGCTTTGCTCGAGTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp AGAGATAATGCAGCAAGCCAGCTCATGTGGTGGCCAGAGGGTTTGGTGCAAGAGCCAGAGAAAAGGGCATaGTGCCATTGTTGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: RDNAASQLMWWPEGLVQEPEKRA*CHCCCF
Trigger: AAAACAGCAACAATGGCAGCATGCCCTTTTCTCTGG...CTCTTGCACCAAACCCTCTGGCCACCACATGAGCTGGCTTGCTGCATTATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp GTAGATGAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGTCCTACAGGTGCTTTTaGGCTGGCAACAGGTCTATA +
Preference number: 4 (lower is better)
Translates to: VDETLVGREPENSTPAFVSYRCF*AGNRSI
Trigger: TATAGACCTGTTGCCAGCCCAAAAGCACCTGTAGGA...CACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTCATCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CAA 72 bp GCTTCCCGTGACACCATGGCAACTCCTGATATTTCTTaGCTGGCACATGTCTGCAAAGGCAGGTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ASRDTMATPDIS*LAHVCKGRFGF
Trigger: AAAGCCAAACCTGCCTTTGCAGACATGTGCCAGCAAAGAAATATCAGGAGTTGCCATGGTGTCACGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CAA 72 bp AGCTACCACCACCAGCGCTCTTTGGTTGATGGAGTTTaGAAACCTCTTTGGGATACAGTTCCTAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SYHHQRSLVDGV*KPLWDTVPRGR
Trigger: CCTCCCTCTAGGAACTGTATCCCAAAGAGGTTTCAAAACTCCATCAACCAAAGAGCGCTGGTGGTGGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CAA 72 bp CCAATGAGGGTCTCCAGCTACCACCACCAGCGCTCTTaGGTTGATGGAGTTTTGAAACCTCTTTGGGATACA +
Preference number: 4 (lower is better)
Translates to: PMRVSSYHHQRS*VDGVLKPLWDT
Trigger: TGTATCCCAAAGAGGTTTCAAAACTCCATCAACCAAAGAGCGCTGGTGGTGGTAGCTGGAGACCCTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp AGAGATAATGCAGCAAGCCAGCTCATGTGGTGGCCAGAGGGTTTGGTGCAAGAGTCAAGACTGGCTTTCTaGAATCAGACAGACAAGAAC +
Preference number: 4 (lower is better)
Translates to: RDNAASQLMWWPEGLVQESRLAF*NQTDKN
Trigger: GTTCTTGTCTGTCTGATTTCAGAAAGCCAGTCTTGA...CTCTTGCACCAAACCCTCTGGCCACCACATGAGCTGGCTTGCTGCATTATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp ATACCCCAGGAGAAGGTCATCCTCAAGACACATAATCATGAGATTCTCCAGGGTCTGGGCTGGCTGCACTaGGTAATTGCTGACCTACAT +
Preference number: 4 (lower is better)
Translates to: IPQEKVILKTHNHEILQGLGWLH*VIADLH
Trigger: ATGTAGGTCAGCAATTACTCAGTGCAGCCAGCCCAG...ACCCTGGAGAATCTCATGATTATGTGTCTTGAGGATGACCTTCTCCTGGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp GTAGATGAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGAGGCCAACATTCAAATaGAGGAAATGTGGAGAACCC +
Preference number: 4 (lower is better)
Translates to: VDETLVGREPENSTPAFVRPTFK*RKCGEP
Trigger: GGGTTCTCCACATTTCCTGCATTTGAATGTTGGCCT...CACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTCATCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp CTAGAGAGAAAGGCCAGGTCACCTCTAAAAAGAAGCTCATCAGGAAAACAACAACACTCCCTTCCCAGCTaGTTTGCTCCTGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: LERKARSPLKRSSSGKQQHSLPS*FAPATE
Trigger: CTCAGTGGCAGGAGCAAAGCAGCTGGGAAGGGAGTG...TTGTTGTTTTCCTGATGAGCTTCTTTTTAGAGGTGACCTGGCCTTTCTCTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp AGAGATAATGCAGCAAGCCAGCTCATGTGGTGGCCAGAGGGTTTGGTGCAAGAGCTCCTGATATTTCTTTaGTGGCACATGTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RDNAASQLMWWPEGLVQELLIFL*WHMSAK
Trigger: CTTTGCAGACATGTGCCAGCAAAGAAATATCAGGAG...CTCTTGCACCAAACCCTCTGGCCACCACATGAGCTGGCTTGCTGCATTATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp GTAGATGAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGGCATGCTGCCATTGTTaGTGTTTTGCAGCATTCAGT +
Preference number: 4 (lower is better)
Translates to: VDETLVGREPENSTPAFVACCHC*CFAAFS
Trigger: ACTGAATGCTGCAAAACAGCAACAATGGCAGCATGC...CACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTCATCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp GTAGATGAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGCTTCCCGTGACACCATaGCAACTCCTGATATTTCTT +
Preference number: 4 (lower is better)
Translates to: VDETLVGREPENSTPAFVLPVTP*QLLIFL
Trigger: AAGAAATATCAGGAGTTGCCATGGTGTCACGGGAAG...CACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTCATCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp TGGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAACTCGAGCAAAGCAGGTTACAAGAGCCTTAGATACTaGCTTTCCAGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: WLSRLPRKSSCNSSKAGYKSLRY*LSRLPR
Trigger: TCTGGGAAGCCTGGAAAGCCAGTATCTAAGGCTCTT...GTAACCTGCTTTGCTCGAGTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp GAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGCTAACACAGACAAGCAAATGCTaGGAAAATGTTACCACAGGA +
Preference number: 4 (lower is better)
Translates to: ETLVGREPENSTPAFVLTQTSKC*ENVTTG
Trigger: TCCTGTGGTAACATTTTCTCAGCATTTGCTTGTCTG...TGTTAGCACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp GTAGATGAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGCCCTTTAGAGAAAAGTaGTCGAGATTGCTGACTAGA +
Preference number: 4 (lower is better)
Translates to: VDETLVGREPENSTPAFVPFREK*SRLLTR
Trigger: TCTAGTCAGCAATCTCGATCACTTTTCTCTAAAGGG...CACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTCATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp AGTATCCTGCCCCAAGCCAACACCACCTTTAGTGCAACAGCACACAGCCTCCAGACAATACACGCACTGTaGAATTACTCACGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SILPQANTTFSATAHSLQTIHAL*NYSREN
Trigger: ATTTTCACGTGAGTAATTTCACAGTGCGTGTATTGT...CTGGAGGCTGTGTGCTGTTGCACTAAAGGTGGTGTTGGCTTGGGGCAGGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp TTCCTTCTCACTGGAAAGTACTTCCCAATGAGGGTCTCCAGCTACCACCACCAGGTGAGCTGCCATTTTTaGTGTTTGTGTGAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: FLLTGKYFPMRVSSYHHQVSCHF*CLCELA
Trigger: AGCTAACTCACACAAACAGCAAAAATGGCAGCTCAC...CTGGTGGTGGTAGCTGGAGACCCTCATTGGGAAGTACTTTCCAGTGAGAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp TTCCTTCTCACTGGAAAGTACTTCCCAATGAGGGTCTCCAGCTACCACCACCAGTGCTCTAAAAAGACATaGCCAGACTGCCTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: FLLTGKYFPMRVSSYHHQCSKKT*PDCLLK
Trigger: CTTTAACAGGCAGTCTGGCCATGTCTTTTTAGAGCA...CTGGTGGTGGTAGCTGGAGACCCTCATTGGGAAGTACTTTCCAGTGAGAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp CTAGAGAGAAAGGCCAGGTCACCTCTAAAAAGAAGCTCATCAGGAAAACAACAAAGCACTGCACCTCCCTaGGATGGAGCTACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LERKARSPLKRSSSGKQQSTAPP*DGATRK
Trigger: CTTTCTGGTAGCTCCATCCCAGGGAGGTGCAGTGCT...TTGTTGTTTTCCTGATGAGCTTCTTTTTAGAGGTGACCTGGCCTTTCTCTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp CTAGAGAGAAAGGCCAGGTCACCTCTAAAAAGAAGCTCATCAGGAAAACAACAAGACATGCCTGACTCATaGAGAGCTCCAGCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LERKARSPLKRSSSGKQQDMPDS*RAPAKQ
Trigger: CTGCTTTGCTGGAGCTCTTCATGAGTCAGGCATGTC...TTGTTGTTTTCCTGATGAGCTTCTTTTTAGAGGTGACCTGGCCTTTCTCTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp GAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGCTAACAGTTACAAAAGTAATTTaGAACCCAATGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ETLVGREPENSTPAFVLTVTKVI*NPMQGR
Trigger: CCTCCCTTGCATTGGGTTGCAAATTACTTTTGTAAC...TGTTAGCACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp GAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGCTAACACAGTACAACTGTCCTTaGTACCCTCAGACTAATAAA +
Preference number: 4 (lower is better)
Translates to: ETLVGREPENSTPAFVLTQYNCP*YPQTNK
Trigger: TTTATTAGTCTGAGGGTAGCAAGGACAGTTGTACTG...TGTTAGCACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp AAGCCCAAAGGTCAGCAACCTCAAAGATATGCCCACAAAGATAAGACACAATCAGTGGGCCACCATCTTTaGTGCTTGAGCAACTTAGCC +
Preference number: 4 (lower is better)
Translates to: KPKGQQPQRYAHKDKTQSVGHHL*CLSNLA
Trigger: GGCTAAGTTGCTCAAGCAGCAAAGATGGTGGCCCAC...TGATTGTGTCTTATCTTTGTGGGCATATCTTTGAGGTTGCTGACCTTTGGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp AAGCCCAAAGGTCAGCAACCTCAAAGATATGCCCACAAAGATAAGACACAATCACCAAGATCACACCACTaGACACCAGCTTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: KPKGQQPQRYAHKDKTQSPRSHH*TPAWVT
Trigger: TGTCACCCAAGCTGGTGTGCAGTGGTGTGATCTTGG...TGATTGTGTCTTATCTTTGTGGGCATATCTTTGAGGTTGCTGACCTTTGGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp TGGCTTTCCAGGCTTCCCAGAAAAAGTAGCTGCAACTCGAGCAAAGCAGGTTACCAAATGCAGGAAATGTaGAGAACCCCAGTAAGATAC +
Preference number: 4 (lower is better)
Translates to: WLSRLPRKSSCNSSKAGYQMQEM*RTPVRY
Trigger: GTATCTTACTGGGGTTCTCCACATTTCCTGCATTTG...GTAACCTGCTTTGCTCGAGTTGCAGCTACTTTTTCTGGGAAGCCTGGAAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp AAGCCCAAAGGTCAGCAACCTCAAAGATATGCCCACAAAGATAAGACACAATCAGCCAGAGAACACAGTTaGGGCTCAAAACAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: KPKGQQPQRYAHKDKTQSAREHS*GSKQVP
Trigger: GGGGACTTGTTTTGAGCCCCAACTGTGTTCTCTGGC...TGATTGTGTCTTATCTTTGTGGGCATATCTTTGAGGTTGCTGACCTTTGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp GTAGATGAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGTTCATTCCTTCTCACTaGAAAGTACTTCCCAATGAG +
Preference number: 4 (lower is better)
Translates to: VDETLVGREPENSTPAFVFIPSH*KVLPNE
Trigger: CTCATTGGGAAGTACTTTCCAGTGAGAAGGAATGAA...CACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTCATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
3UTR CAA 72 bp TCCCAGAGAAAAGGGCATGCTGCCATTGTTGCTGTTTaGCAGCATTCAGTGGTGATAACTTCCAGTACTGGA +
Preference number: 4 (lower is better)
Translates to: SQRKGHAAIVAV*QHSVVITSSTG
Trigger: TCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGCAGCATGCCCTTTTCTCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp GTAGATGAAACTTTGGTGGGCAGAGAGCCAGAAAACTCCACCCCTGCCTTTGTGCTTCTTTCATCCAAATaGCCAAATTACATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VDETLVGREPENSTPAFVLLSSK*PNYISS
Trigger: GCTGGAAATGTAATTTGGTCATTTGGATGAAAGAAG...CACAAAGGCAGGGGTGGAGTTTTCTGGCTCTCTGCCCACCAAAGTTTCATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp AAGCCCAAAGGTCAGCAACCTCAAAGATATGCCCACAAAGATAAGACACAATCAAGGTTTGGCTTTGCTTaGCCCACCAGCAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: KPKGQQPQRYAHKDKTQSRFGFA*PTSKWE
Trigger: TTCCCATTTGCTGGTGGGGCAAGCAAAGCCAAACCT...TGATTGTGTCTTATCTTTGTGGGCATATCTTTGAGGTTGCTGACCTTTGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp ATACCCCAGGAGAAGGTCATCCTCAAGACACATAATCATGAGATTCTCCAGGGTGTTGGGCCTAATTTCTaGAGGATGGTCTTGCAAATC +
Preference number: 4 (lower is better)
Translates to: IPQEKVILKTHNHEILQGVGPNF*RMVLQI
Trigger: GATTTGCAAGACCATCCTGCAGAAATTAGGCCCAAC...ACCCTGGAGAATCTCATGATTATGTGTCTTGAGGATGACCTTCTCCTGGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp ATACCCCAGGAGAAGGTCATCCTCAAGACACATAATCATGAGATTCTCCAGGGTATCCCAAACCCTAAGTaGCTTATTCACACCTCAAAC +
Preference number: 4 (lower is better)
Translates to: IPQEKVILKTHNHEILQGIPNPK*LIHTSN
Trigger: GTTTGAGGTGTGAATAAGGCACTTAGGGTTTGGGAT...ACCCTGGAGAATCTCATGATTATGTGTCTTGAGGATGACCTTCTCCTGGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAAGAGGGAGGAGTGAGCTaGCATTTTTGCTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKEGGVS*HFCCLC
Trigger: ACACAAACAGCAAAAATGGCAGCTCACTCCTCCCTC...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp AAGCCCAAAGGTCAGCAACCTCAAAGATATGCCCACAAAGATAAGACACAATCATCAGGGCCTCAAGACTaGCTTTCTGAAATCAGACAG +
Preference number: 4 (lower is better)
Translates to: KPKGQQPQRYAHKDKTQSSGPQD*LSEIRQ
Trigger: CTGTCTGATTTCAGAAAGCCAGTCTTGAGGCCCTGA...TGATTGTGTCTTATCTTTGTGGGCATATCTTTGAGGTTGCTGACCTTTGGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAATCATGTTTTCCTCACTaGGTAGGACCTTCAACAGGG +
Preference number: 4 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKSCFPH*VGPSTG
Trigger: CCCTGTTGAAGGTCCTACCCAGTGAGGAAAACATGA...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp CTAGAGAGAAAGGCCAGGTCACCTCTAAAAAGAAGCTCATCAGGAAAACAACAACTGGAAAATCTGAGGTaGCTAGAAACTGTAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LERKARSPLKRSSSGKQQLENLR*LETVVD
Trigger: GTCCACTACAGTTTCTAGTCACCTCAGATTTTCCAG...TTGTTGTTTTCCTGATGAGCTTCTTTTTAGAGGTGACCTGGCCTTTCTCTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp CTAGAGAGAAAGGCCAGGTCACCTCTAAAAAGAAGCTCATCAGGAAAACAACAAATTCACACCTCAAACTaGAGTTTACCCAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LERKARSPLKRSSSGKQQIHTSN*SLPKER
Trigger: CCTCTCCTTGGGTAAACTGCAGTTTGAGGTGTGAAT...TTGTTGTTTTCCTGATGAGCTTCTTTTTAGAGGTGACCTGGCCTTTCTCTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp AAGCCCAAAGGTCAGCAACCTCAAAGATATGCCCACAAAGATAAGACACAATCATGGTTGATGGAGTTTTaGAACCTCTTTGGGATACAG +
Preference number: 4 (lower is better)
Translates to: KPKGQQPQRYAHKDKTQSWLMEF*NLFGIQ
Trigger: CTGTATCCCAAAGAGGTTTCAAAACTCCATCAACCA...TGATTGTGTCTTATCTTTGTGGGCATATCTTTGAGGTTGCTGACCTTTGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp CTAGAGAGAAAGGCCAGGTCACCTCTAAAAAGAAGCTCATCAGGAAAACAACAATATGATGCAAGAGATTaGCTGAAAGTGATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LERKARSPLKRSSSGKQQYDARD*LKVMGR
Trigger: TCTCCCCATCACTTTCAGGCAATCTCTTGCATCATA...TTGTTGTTTTCCTGATGAGCTTCTTTTTAGAGGTGACCTGGCCTTTCTCTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp CTAGAGAGAAAGGCCAGGTCACCTCTAAAAAGAAGCTCATCAGGAAAACAACAAACAAAGCCTGTTGGCTaGATCCATCTTATACCACAA +
Preference number: 4 (lower is better)
Translates to: LERKARSPLKRSSSGKQQTKPVG*IHLIPQ
Trigger: TTGTGGTATAAGATGGATGCAGCCAACAGGCTTTGT...TTGTTGTTTTCCTGATGAGCTTCTTTTTAGAGGTGACCTGGCCTTTCTCTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp TTTCCAGCAAGGCCTAAGATGACAGAAGTAGAATTCAGAATATGGGTAGAAACAAGAAAACTCCACCCCTaGCTTTGTGCTAACACTGTG +
Preference number: 4 (lower is better)
Translates to: FPARPKMTEVEFRIWVETRKLHP*LCANTV
Trigger: CACAGTGTTAGCACAAAGGCAGGGGTGGAGTTTTCT...TGTTTCTACCCATATTCTGAATTCTACTTCTGTCATCTTAGGCCTTGCTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp TTTCCAGCAAGGCCTAAGATGACAGAAGTAGAATTCAGAATATGGGTAGAAACATTGCTGGCACATGTCTaGAAAGGCAGGTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: FPARPKMTEVEFRIWVETLLAHV*KGRFGF
Trigger: AAAGCCAAACCTGCCTTTGCAGACATGTGCCAGCAA...TGTTTCTACCCATATTCTGAATTCTACTTCTGTCATCTTAGGCCTTGCTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR TCA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAAAAGAAACCAAATCTATaGTGCAAGAGATTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKKKPNL*CKRLPE
Trigger: TTCAGGCAATCTCTTGCATCATAGATTTGGTTTCTT...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR GCA 90 bp CTAGAGAGAAAGGCCAGGTCACCTCTAAAAAGAAGCTCATCAGGAAAACAACAATATATATCATCCAATTaGCCCCAAATCAACCCAGAA +
Preference number: 4 (lower is better)
Translates to: LERKARSPLKRSSSGKQQYISSN*PQINPE
Trigger: TTCTGGGTTGATTTGGGGGCAATTGGATGATATATA...TTGTTGTTTTCCTGATGAGCTTCTTTTTAGAGGTGACCTGGCCTTTCTCTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp CTAGAGAGAAAGGCCAGGTCACCTCTAAAAAGAAGCTCATCAGGAAAACAACAAAGTAAACCCCTAACTTaGCCAAAAGTAAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: LERKARSPLKRSSSGKQQSKPLT*PKVKIF
Trigger: GAAGATCTTTACTTTTGGCCAAGTTAGGGGTTTACT...TTGTTGTTTTCCTGATGAGCTTCTTTTTAGAGGTGACCTGGCCTTTCTCTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp CTAGAGAGAAAGGCCAGGTCACCTCTAAAAAGAAGCTCATCAGGAAAACAACAATGTCCTGCAAAAATATaGCTAGACTGCTTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: LERKARSPLKRSSSGKQQCPAKI*LDCFLK
Trigger: CTTAAGAAAGCAGTCTAGCCATATTTTTGCAGGACA...TTGTTGTTTTCCTGATGAGCTTCTTTTTAGAGGTGACCTGGCCTTTCTCTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CCA 90 bp TTTCCAGCAAGGCCTAAGATGACAGAAGTAGAATTCAGAATATGGGTAGAAACAACAATCTATGGAGAATaGAGTAAAGCAAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: FPARPKMTEVEFRIWVETTIYGE*SKARQD
Trigger: GTCCTGCCTTGCTTTACTCCATTCTCCATAGATTGT...TGTTTCTACCCATATTCTGAATTCTACTTCTGTCATCTTAGGCCTTGCTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp CACTCCTTGGTCTGCTGGCCTCTCCCAGGGACCCAGTCTGGCCACAGCTGCTTACTATATATCATCCAATaGCCCCCAAATCAACCCAGA +
Preference number: 5 (lower is better)
Translates to: HSLVCWPLPGTQSGHSCLLYIIQ*PPNQPR
Trigger: TCTGGGTTGATTTGGGGGCAATTGGATGATATATAG...TAAGCAGCTGTGGCCAGACTGGGTCCCTGGGAGAGGCCAGCAGACCAAGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp CAAACTGCAGTTTACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACTTCTGCAGGATGGTCTaGCAAATCAGAAGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: QTAVYPRRGSQPILHGSHFCRMV*QIRRSW
Trigger: CCAGCTTCTTCTGATTTGCAAGACCATCCTGCAGAA...GTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGTAAACTGCAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp TTCCTTCTCACTGGAAAGTACTTCCCAATGAGGGTCTCCAGCTACCACCACCAGAGCCAGAGAACACAGTaGGGGCTCAAAACAAGTCCC +
Preference number: 5 (lower is better)
Translates to: FLLTGKYFPMRVSSYHHQSQRTQ*GLKTSP
Trigger: GGGACTTGTTTTGAGCCCCAACTGTGTTCTCTGGCT...CTGGTGGTGGTAGCTGGAGACCCTCATTGGGAAGTACTTTCCAGTGAGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp TTCCTTCTCACTGGAAAGTACTTCCCAATGAGGGTCTCCAGCTACCACCACCAGGGCATGCTGCCATTGTaGCTGTTTTGCAGCATTCAG +
Preference number: 5 (lower is better)
Translates to: FLLTGKYFPMRVSSYHHQGMLPL*LFCSIQ
Trigger: CTGAATGCTGCAAAACAGCAACAATGGCAGCATGCC...CTGGTGGTGGTAGCTGGAGACCCTCATTGGGAAGTACTTTCCAGTGAGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp AAGCCCAAAGGTCAGCAACCTCAAAGATATGCCCACAAAGATAAGACACAATCACCAACTGAGCACTCCTaGGTCTGCTGGCCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: KPKGQQPQRYAHKDKTQSPTEHS*VCWPLP
Trigger: TGGGAGAGGCCAGCAGACCAAGGAGTGCTCAGTTGG...TGATTGTGTCTTATCTTTGTGGGCATATCTTTGAGGTTGCTGACCTTTGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp CAAACTGCAGTTTACCCAAGGAGAGGAAGCCAGCCCATCCTCCATGGGTCCCACTCACCCAATAGTATATaGTTACCTACAACCTTGGGT +
Preference number: 5 (lower is better)
Translates to: QTAVYPRRGSQPILHGSHSPNSI*LPTTLG
Trigger: ACCCAAGGTTGTAGGTAACAATATACTATTGGGTGA...GTGGGACCCATGGAGGATGGGCTGGCTTCCTCTCCTTGGGTAAACTGCAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAATCTGCAAAGGCAGGTTaGGCTTTGCTTGCCCCACCA +
Preference number: 5 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKSAKAG*ALLAPP
Trigger: TGGTGGGGCAAGCAAAGCCAAACCTGCCTTTGCAGA...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAACTCCTACAGGTGCTTTaGGGCTGGCAACAGGTCTAT +
Preference number: 5 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKLLQVL*GWQQVY
Trigger: ATAGACCTGTTGCCAGCCCAAAAGCACCTGTAGGAG...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp TTCCTTCTCACTGGAAAGTACTTCCCAATGAGGGTCTCCAGCTACCACCACCAGTCAATTGTGAGTCAATaGTGTGGCATGGGTACAATT +
Preference number: 5 (lower is better)
Translates to: FLLTGKYFPMRVSSYHHQSIVSQ*CGMGTI
Trigger: AATTGTACCCATGCCACACAATTGACTCACAATTGA...CTGGTGGTGGTAGCTGGAGACCCTCATTGGGAAGTACTTTCCAGTGAGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp AAGCCCAAAGGTCAGCAACCTCAAAGATATGCCCACAAAGATAAGACACAATCAATTGTAGATGAAACTTaGGTGGGCAGAGAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: KPKGQQPQRYAHKDKTQSIVDET*VGREPE
Trigger: TTCTGGCTCTCTGCCCACCAAAGTTTCATCTACAAT...TGATTGTGTCTTATCTTTGTGGGCATATCTTTGAGGTTGCTGACCTTTGGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp AAGCCCAAAGGTCAGCAACCTCAAAGATATGCCCACAAAGATAAGACACAATCAGCCATTGTTGCTGTTTaGCAGCATTCAGTGGTGATA +
Preference number: 5 (lower is better)
Translates to: KPKGQQPQRYAHKDKTQSAIVAV*QHSVVI
Trigger: TATCACCACTGAATGCTGCAAAACAGCAACAATGGC...TGATTGTGTCTTATCTTTGTGGGCATATCTTTGAGGTTGCTGACCTTTGGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp GCCATTGTTGCTGTTTTGCAGCATTCAGTGGTGATAACTTCCAGTACTGGAAAATGCCATTTTTGCTGTTaGTGTGAGTTAGCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: AIVAVLQHSVVITSSTGKCHFCC*CELAVP
Trigger: TGGAACAGCTAACTCACACAAACAGCAAAAATGGCA...TTTTCCAGTACTGGAAGTTATCACCACTGAATGCTGCAAAACAGCAACAATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp CTAGAGAGAAAGGCCAGGTCACCTCTAAAAAGAAGCTCATCAGGAAAACAACAAAGTTACAAAAGTAATTaGCAACCCAATGCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: LERKARSPLKRSSSGKQQSYKSN*QPNARE
Trigger: CTCCCTTGCATTGGGTTGCAAATTACTTTTGTAACT...TTGTTGTTTTCCTGATGAGCTTCTTTTTAGAGGTGACCTGGCCTTTCTCTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423484.3
CDS-3UTR CAA 90 bp CTAGAGAGAAAGGCCAGGTCACCTCTAAAAAGAAGCTCATCAGGAAAACAACAATTGGTTGATGGAGTTTaGAAACCTCTTTGGGATACA +
Preference number: 5 (lower is better)
Translates to: LERKARSPLKRSSSGKQQLVDGV*KPLWDT
Trigger: TGTATCCCAAAGAGGTTTCAAAACTCCATCAACCAA...TTGTTGTTTTCCTGATGAGCTTCTTTTTAGAGGTGACCTGGCCTTTCTCTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423484.3