Pregenerated sensors for ZNF730 (Homo sapiens)
Ensembl gene IDs: ENSG00000183850Ensembl transcript IDs: ENST00000593635.1, ENST00000599195.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AATTGTCAACAAAAATTTTGTAGGCCGGAAAGAAACTGTGTGATGCAGTCAAAGCGGAAAGAAACTGTGTaGTGCAGTCAAAGTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NCQQKFCRPERNCVMQSKRKETV*CSQSPG Trigger: CCCAGGACTTTGACTGCATCACACAGTTTCTTTCCG...CTTTGACTGCATCACACAGTTTCTTTCCGGCCTACAAAATTTTTGTTGACAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000599195.1 |
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| CDS-3UTR CCA 90 bp | AATTGTCAACAAAAATTTTGTAGGCCGGAAAGAAACTGTGTGATGCAGTCAAAGGCTGAAAGCAGTTCCTaGGGGTTTGGCTACCATATC | + |
|
Preference number: 4 (lower is better) Translates to: NCQQKFCRPERNCVMQSKAESSS*GFGYHI Trigger: GATATGGTAGCCAAACCCCCAGGAACTGCTTTCAGC...CTTTGACTGCATCACACAGTTTCTTTCCGGCCTACAAAATTTTTGTTGACAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000599195.1 |
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| CDS-3UTR CCA 90 bp | AATTGTCAACAAAAATTTTGTAGGCCGGAAAGAAACTGTGTGATGCAGTCAAAGAGTCACAGAGCATCTTaGGAGCTACAAGATAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NCQQKFCRPERNCVMQSKSHRAS*ELQDKS Trigger: ACTTTTATCTTGTAGCTCCCAAGATGCTCTGTGACT...CTTTGACTGCATCACACAGTTTCTTTCCGGCCTACAAAATTTTTGTTGACAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000599195.1 |
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| CDS-3UTR CAA 90 bp | AATTGTCAACAAAAATTTTGTAGGCCGGAAAGAAACTGTGTGATGCAGTCAAAGGCAGTTCCTGGGGGTTaGGCTACCATATCATGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NCQQKFCRPERNCVMQSKAVPGG*ATISCV Trigger: GACACATGATATGGTAGCCAAACCCCCAGGAACTGC...CTTTGACTGCATCACACAGTTTCTTTCCGGCCTACAAAATTTTTGTTGACAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000599195.1 |
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| CDS CCA 72 bp | ACAGAGTCTGTGACAAAGTCGCCGGGCGGGGGTCGGTaGTTCCCAGGTAGAGGACGCGGAACAGTGAAGACC | + |
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Preference number: 6 (lower is better) Translates to: TESVTKSPGGGR*FPGRGRGTVKT Trigger: GGTCTTCACTGTTCCGCGTCCTCTACCTGGGAACCACCGACCCCCGCCCGGCGACTTTGTCACAGACTCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593635.1 |
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