RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF713 (Homo sapiens)

Ensembl gene IDs: ENSG00000178665

Ensembl transcript IDs: ENST00000411863.2, ENST00000429591.4, ENST00000466630.5, ENST00000482436.1, ENST00000484120.1, ENST00000633730.1

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTAGACTACTTCGTCAGGTGTTTATATAAGCCACTGCAGCTCTCCTaGTTCCCACCCTCAACATGGCACCAGGGCTCACCCGCAGGTACA +
Preference number: 1 (lower is better)
Translates to: LDYFVRCLYKPLQLS*FPPSTWHQGSPAGT
Trigger: TGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACCTGACGAAGTAGTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
3UTR TCA 90 bp GGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTaGTACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTATTTT +
Preference number: 1 (lower is better)
Translates to: GLTRRYSSSLLHLPQ*YGVAWEFLVSGHYF
Trigger: AAAATAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
3UTR CCA 90 bp CTGATTTCCCCCACCATAAGTTATGTGCTGCTAAATGAAGGACTGTaGCGAACAGTTTGCTCACATTTATATTCACATAATTTCTCCCGA +
Preference number: 1 (lower is better)
Translates to: LISPTISYVLLNEGL*RTVCSHLYSHNFSR
Trigger: TCGGGAGAAATTATGTGAATATAAATGTGAGCAAACTGTTCGCCACAGTCCTTCATTTAGCAGCACATAACTTATGGTGGGGGAAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR TCA 90 bp ATAGGGAGTCTCTCTTACATAATTTCCCTGATAGTAAATCAAGTCTaGATTATGTTTGATGCTGTTTCCCTGTGTGTCAGAATTCAGGGG +
Preference number: 1 (lower is better)
Translates to: IGSLSYIISLIVNQV*IMFDAVSLCVRIQG
Trigger: CCCCTGAATTCTGACACACAGGGAAACAGCATCAAACATAATTCAGACTTGATTTACTATCAGGGAAATTATGTAAGAGAGACTCCCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR CAA 90 bp ATTGGTACTGGCTTTCAGCTGGGAGCTCGGCTAGGGCTGTGGGCCTaGGCTCCTCTCCATATGGGCTTCTCCATGGGCTGTCTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: IGTGFQLGARLGLWA*APLHMGFSMGCLGF
Trigger: GAAACCCAGACAGCCCATGGAGAAGCCCATATGGAGAGGAGCCAAGGCCCACAGCCCTAGCCGAGCTCCCAGCTGAAAGCCAGTACCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CCA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGAGTCTCCAGAGTAGCTaGGATTGCAGGTGTGCACCA +
Preference number: 2 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQSLQSS*DCRCAP
Trigger: TGGTGCACACCTGCAATCCCAGCTACTCTGGAGACT...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429591.4
3UTR-3UTR CCA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTCTGGTCTCAAACTCCTaGCCTCAGATGATCACCCCA +
Preference number: 2 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSLVSNS*PQMITP
Trigger: TGGGGTGATCATCTGAGGCCAGGAGTTTGAGACCAG...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
3UTR-3UTR CCA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCAAGGCTGGCAAATTaGTACTGGCTTTCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSSRLAN*YWLSAG
Trigger: CCCAGCTGAAAGCCAGTACCAATTTGCCAGCCTTGA...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR TCA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGAGGCTGGCTAAGAGATaGGGTGTGGCTGAAGGCCTT +
Preference number: 2 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRRLAKR*GVAEGL
Trigger: AAGGCCTTCAGCCACACCTCATCTCTTAGCCAGCCT...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR TCA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTTGGTTTCTACGCATTaGAAGTTTATGGCCAGGCGC +
Preference number: 2 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSLVSTH*KFMARR
Trigger: GCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAA...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429591.4
3UTR-3UTR GCA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTCCAGAAGCTGTCTCCTaGGAGTCTCTCCATTATCAT +
Preference number: 2 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSPEAVS*ESLHYH
Trigger: ATGATAATGGAGAGACTCGCAGGAGACAGCTTCTGG...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR GCA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGGTGATCTTGGCTCACTaGAACTTCAGCCTGGGTGAC +
Preference number: 2 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRVILAH*NFSLGD
Trigger: GTCACCCAGGCTGAAGTTGCAGTGAGCCAAGATCAC...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCCTGGCAAATTGGTACTaGCTTTCAGCTGGGAGCTCG +
Preference number: 2 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTLANWY*LSAGSS
Trigger: CGAGCTCCCAGCTGAAAGCCAGTACCAATTTGCCAG...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR GCA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGTCCTCTAGCTCCAACTaGGCGATTACCTCTGGCTTA +
Preference number: 2 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRSSSSN*AITSGL
Trigger: TAAGCCAGAGGTAATCGCGCAGTTGGAGCTAGAGGA...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR GCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGTTAATGTGACTGGCTaGACTACAGCATCGCCTTTA +
Preference number: 2 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMVNVTG*TTASPL
Trigger: TAAAGGCGATGCTGTAGTGCAGCCAGTCACATTAAC...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
3UTR-3UTR CCA 90 bp CGGCCACATCCTGAAACGTCAGTGATTCAAGGCTGGCAAATTGGTACTGGCTTTATATGGGCTTCTCCATaGGCTGTCTGGGTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: RPHPETSVIQGWQIGTGFIWASP*AVWVSS
Trigger: GGAGGAAACCCAGACAGCCCATGGAGAAGCCCATAT...AAAGCCAGTACCAATTTGCCAGCCTTGAATCACTGACGTTTCAGGATGTGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTACGCATTGAAAGTTTATaGCCAGGCGCAGTGGCCCAC +
Preference number: 2 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLRIESL*PGAVAH
Trigger: GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCG...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
3UTR-3UTR CCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGTGCACCACCATGCCTaGATAAGGACTTCTGATTTT +
Preference number: 2 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMVHHHA*IRTSDF
Trigger: AAAATCAGAAGTCCTTATCCAGGCATGGTGGTGCAC...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
3UTR-3UTR TCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGCATCCCAACAGAATaGGGTAGAAGTCTTACTGCC +
Preference number: 2 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTSIPTE*GRSLTA
Trigger: GGCAGTAAGACTTCTACCTCATTCTGTTGGGATGCT...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR TCA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGTCTGGCTTACAAAGCTaGTACCCCAGTGCAACTAGA +
Preference number: 2 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRSGLQS*YPSATR
Trigger: TCTAGTTGCACTGGGGTATCAGCTTTGTAAGCCAGA...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR TCA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTTGTGGTTGACTTTTTaGTTTCGGGTCTGTTTTCTC +
Preference number: 2 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQLWLTF*FRVCFL
Trigger: GAGAAAACAGACCCGAAATCAAAAAGTCAACCACAA...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR TCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCGGCTTCTCTCCTGTGTaGTCTTTTTGTGGGTCAAAG +
Preference number: 2 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTGFSPV*SFCGSK
Trigger: CTTTGACCCACAAAAAGATCACACAGGAGAGAAGCC...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR TCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTTTTCTCCATCTGGATaGGTATCCAGCAGGCTGTCT +
Preference number: 2 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWFSPSG*VSSRLS
Trigger: AGACAGCCTGCTGGATACTCATCCAGATGGAGAAAA...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR TCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCTTATGTGCTGCTAAATaGAGGACTGTGGCGAACAGT +
Preference number: 2 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTLCAAK*RTVANS
Trigger: ACTGTTCGCCACAGTCCTTCATTTAGCAGCACATAA...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR GCA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGATCATCACAGGATATTaGCACAAACTATCACACTGT +
Preference number: 2 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQIITGY*HKLSHC
Trigger: ACAGTGTGATAGTTTGTGGCAATATCCTGTGATGAT...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
3UTR-3UTR CCA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTGTGTGATCTTTTTGTaGGTCAAAGTTACTTGTCCT +
Preference number: 2 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSCVIFL*VKVTCP
Trigger: AGGACAAGTAACTTTGACCCACAAAAAGATCACACA...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR TCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTGGATTTTCCTGTGTTaGTTAAGGTGTGCACTCTGG +
Preference number: 2 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWWIFLC*LRCALW
Trigger: CCAGAGTGCACACCTTAATCAACACAGGAAAATCCA...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCTGTTTTCTCCATCTaGATGAGTATCCAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWSVFSI*MSIQQA
Trigger: AGCCTGCTGGATACTCATCCAGATGGAGAAAACAGA...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR TCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTATTTCAAGTTAATGTaGCTGGCTGCACTACAGCAT +
Preference number: 2 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWYFKLM*LAALQH
Trigger: ATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATA...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
3UTR-3UTR GCA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGCTGTGGCGAACAGTTTaGTCACATTTATATTCACAT +
Preference number: 2 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRLWRTV*SHLYSH
Trigger: ATGTGAATATAAATGTGAGCAAACTGTTCGCCACAG...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCTTTTATAACCCCTCCTaGGAATGTAATATGCTGCTA +
Preference number: 2 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTFYNPS*ECNMLL
Trigger: TAGCAGCATATTACATTCCCAGGAGGGGTTATAAAA...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429591.4
3UTR-3UTR TCA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTCCTGTAAGCAACATCTaGGGCTGGCTAAGAGATGAG +
Preference number: 2 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPPVSNI*GWLRDE
Trigger: CTCATCTCTTAGCCAGCCTCAGATGTTGCTTACAGG...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCTTCTTGGTTAAACTCTaGATGGTAATCAAAATCCCA +
Preference number: 2 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTFLVKL*MVIKIP
Trigger: TGGGATTTTGATTACCATCCAGAGTTTAACCAAGAA...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR GCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTAATCATCACAGGATATTaGCACAAACTATCACACTGT +
Preference number: 2 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLIITGY*HKLSHC
Trigger: ACAGTGTGATAGTTTGTGGCAATATCCTGTGATGAT...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
3UTR-3UTR GCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTTTCAAGTCATTCTCATaGCTCAGTCTCCAGAGTAGC +
Preference number: 2 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFFKSFS*LSLQSS
Trigger: GCTACTCTGGAGACTGAGGCATGAGAATGACTTGAA...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000429591.4
3UTR-3UTR CCA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTTCAGTGATTCAAGGCTaGCAAATTGGTACTGGCTTT +
Preference number: 2 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPSVIQG*QIGTGF
Trigger: AAAGCCAGTACCAATTTGCCAGCCTTGAATCACTGA...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR TCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTATTCTGGCTTGTGGTTaGCTTTTTGATTTCGGGTCT +
Preference number: 2 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFILACG*LFDFGS
Trigger: AGACCCGAAATCAAAAAGTCAACCACAAGCCAGAAT...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR TCA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTCTGCTGCATAAGGTTTaGGTTCAGATTACAGTTTTC +
Preference number: 2 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPLLHKV*VQITVF
Trigger: GAAAACTGTAATCTGAACTCAAACCTTATGCAGCAG...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR TCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTATGTTGAGTAAAGGATaGATGCTGACGGAAGGCTTT +
Preference number: 2 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFMLSKG*MLTEGF
Trigger: AAAGCCTTCCGTCAGCATTCATCCTTTACTCAACAT...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR CCA 72 bp GGTACTGGCTTTCAGCTGGGAGCTCGGCTAGGGCTGTaGGCCTTGGCTCCTCTCCATATGGGCTTCTCCATG +
Preference number: 3 (lower is better)
Translates to: GTGFQLGARLGL*ALAPLHMGFSM
Trigger: CATGGAGAAGCCCATATGGAGAGGAGCCAAGGCCCACAGCCCTAGCCGAGCTCCCAGCTGAAAGCCAGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CAA 90 bp AAATCCCAGAGTCCTCCTAGGATGGAGTACCAGAAGCTGTCTCCTGCGAGTCTCCTAGGGCTGTGGGCCTaGGCTCCTCTCCATATGGGC +
Preference number: 3 (lower is better)
Translates to: KSQSPPRMEYQKLSPASLLGLWA*APLHMG
Trigger: GCCCATATGGAGAGGAGCCAAGGCCCACAGCCCTAG...GAGACTCGCAGGAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCTGGGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CAA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTCGATAGAGGTTCTTTaGGGCAGGGTACAGCTGGTC +
Preference number: 3 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQSIEVL*GRVQLV
Trigger: GACCAGCTGTACCCTGCCCAAAAGAACCTCTATCGA...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CAA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGTTCAAGGCTGGCAAATaGGTACTGGCTTTCAGCTGG +
Preference number: 3 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRFKAGK*VLAFSW
Trigger: CCAGCTGAAAGCCAGTACCAATTTGCCAGCCTTGAA...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CAA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTACAGTGGCGTGATCTaGGCTCACTGCAACTTCAGC +
Preference number: 3 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWYSGVI*AHCNFS
Trigger: GCTGAAGTTGCAGTGAGCCAAGATCACGCCACTGTA...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR TCA 72 bp CGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTaGTACGGGGTGGCATGGGAATTCTTAGTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: RRYSSSLLHLPQ*YGVAWEFLVSG
Trigger: ACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
3UTR CCA 72 bp CTGGATGGTAATCAAAATCCCAGAGTCCTCCTAGGATaGAGTACCAGAAGCTGTCTCCTGCGAGTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: LDGNQNPRVLLG*STRSCLLRVSP
Trigger: TGGAGAGACTCGCAGGAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCTGGGATTTTGATTACCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CAA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGAATCATCACAGGATATaGCCACAAACTATCACACTG +
Preference number: 3 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQNHHRI*PQTITL
Trigger: CAGTGTGATAGTTTGTGGCAATATCCTGTGATGATT...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
3UTR-3UTR CAA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGCGCCCCCAGCCAGCATaGTCTTTAATTAATCAAAAT +
Preference number: 3 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRRPQPA*SLINQN
Trigger: ATTTTGATTAATTAAAGACAATGCTGGCTGGGGGCG...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429591.4
3UTR-3UTR CAA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGTCCTGTGTGATCTTTTaGTGGGTCAAAGTTACTTGT +
Preference number: 3 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRSCVIF*WVKVTC
Trigger: ACAAGTAACTTTGACCCACAAAAAGATCACACAGGA...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CAA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGAAGTCTGAATTATGTTaGATGCTGTTTCCCTGTGTG +
Preference number: 3 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRKSELC*MLFPCV
Trigger: CACACAGGGAAACAGCATCAAACATAATTCAGACTT...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CAA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGATGGATTTTCCTGTGTaGATTAAGGTGTGCACTCTG +
Preference number: 3 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWMDFPV*IKVCTL
Trigger: CAGAGTGCACACCTTAATCAACACAGGAAAATCCAT...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CAA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGACTGTGGCGAACAGTTaGCTCACATTTATATTCACA +
Preference number: 3 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWTVANS*LTFIFT
Trigger: TGTGAATATAAATGTGAGCAAACTGTTCGCCACAGT...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CAA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCGTGAGTAATTACAAGTaGTTGCCTATAGGCTTTCTT +
Preference number: 3 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTVSNYK*LPIGFL
Trigger: AAGAAAGCCTATAGGCAACAACTTGTAATTACTCAC...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429591.4
3UTR TCA 72 bp AAGGTGGTCGGGTTTAGAGTAAGCATCCCAACAGAATaGGGTAGAAGTCTTACTGCCATTTATGATCTGCCT +
Preference number: 3 (lower is better)
Translates to: KVVGFRVSIPTE*GRSLTAIYDLP
Trigger: AGGCAGATCATAAATGGCAGTAAGACTTCTACCTCATTCTGTTGGGATGCTTACTCTAAACCCGACCACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR TCA 72 bp TCTGATTTCCCCCACCATAAGTTATGTGCTGCTAAATaGAGGACTGTGGCGAACAGTTTGCTCACATTTATA +
Preference number: 3 (lower is better)
Translates to: SDFPHHKLCAAK*RTVANSLLTFI
Trigger: TATAAATGTGAGCAAACTGTTCGCCACAGTCCTTCATTTAGCAGCACATAACTTATGGTGGGGGAAATCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR-3UTR CAA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTATGAGTTCTTTCATGTaGATTCAGATGTGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFMSSFM*IQMCPL
Trigger: CAGAGGACACATCTGAATCAACATGAAAGAACTCAT...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR CCA 72 bp CCCACCATAAGTTATGTGCTGCTAAATGAAGGACTGTaGCGAACAGTTTGCTCACATTTATATTCACATAAT +
Preference number: 3 (lower is better)
Translates to: PTISYVLLNEGL*RTVCSHLYSHN
Trigger: ATTATGTGAATATAAATGTGAGCAAACTGTTCGCCACAGTCCTTCATTTAGCAGCACATAACTTATGGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR TCA 72 bp TTTCATCAGAAATATTCTGGCTTGTGGTTGACTTTTTaGTTTCGGGTCTGTTTTCTCCATCTGGATGAGTAT +
Preference number: 3 (lower is better)
Translates to: FHQKYSGLWLTF*FRVCFLHLDEY
Trigger: ATACTCATCCAGATGGAGAAAACAGACCCGAAATCAAAAAGTCAACCACAAGCCAGAATATTTCTGATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411863.2
3UTR GCA 72 bp AATGTCAAGATTGCAAAAAGAATCATCACAGGATATTaGCACAAACTATCACACTGTTTCTCAAACAACGGC +
Preference number: 3 (lower is better)
Translates to: NVKIAKRIITGY*HKLSHCFSNNG
Trigger: GCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCCTGTGATGATTCTTTTTGCAATCTTGACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGCCGGCGCGCCAGACCTaGTCTGAGGACAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMPARQT*SEDSLP
Trigger: GGGGAGGCTGTCCTCAGAGCAGGTCTGGCGCGCCGG...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR TCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCGCCAATGACGCCCGGTaGCTGGGCTCCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTANDAR*LGSWGR
Trigger: CCGGCCCCAGGAGCCCAGTCACCGGGCGTCATTGGC...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR GCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGCCGGGAGGGAGAAGGTaGCGAGGGCCCCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWPGGRR*RGPRSL
Trigger: CAGGCTGCGGGGCCCTCGGCACCTTCTCCCTCCCGG...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTTCCCACCCTCAACATaGCACCAGGGCTCACCCGCA +
Preference number: 4 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQFPPST*HQGSPA
Trigger: TGCGGGTGAGCCCTGGTGCCATGTTGAGGGTGGGAA...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCGCGCCAGACCTGCTCTaGGGACAGCCTCCCCGCAAT +
Preference number: 4 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTAPDLL*GQPPRN
Trigger: ATTGCGGGGAGGCTGTCCTCAGAGCAGGTCTGGCGC...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR TCA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTAGGCTGGCTAAGAGATaGGGTGTGGCTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSRLAKR*GVAEGL
Trigger: AAGGCCTTCAGCCACACCTCATCTCTTAGCCAGCCT...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGCCACTGCAGCTCTCCTaGTTCCCACCCTCAACATGG +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMPLQLS*FPPSTW
Trigger: CCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGG...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGCTCCATCTTCCACAGTaGTACGGGGTGGCATGGGAA +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMLHLPQ*YGVAWE
Trigger: TTCCCATGCCACCCCGTATCACTGTGGAAGATGGAG...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGCTGGCAAATTGGTACTaGCTTTCAGCTGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQLANWY*LSAGSS
Trigger: CGAGCTCCCAGCTGAAAGCCAGTACCAATTTGCCAG...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR CCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGCGCATTGAAAGTTTATaGCCAGGCGCAGTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMRIESL*PGAVAH
Trigger: GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCG...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR TCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGAACACCAGTGGTGAGTaGGAGTCACTCAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMNTSGE*ESLNPA
Trigger: GGCAGGATTGAGTGACTCTCACTCACCACTGGTGTT...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp AAATCCCAGAGTCCTCCTAGGATGGAGTACCAGAAGCTGTCTCCTGCGAGTCTCAAGGTGCCCCATCTCTaGTTAGAGCCTCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KSQSPPRMEYQKLSPASLKVPHL*LEPQEP
Trigger: TGGCTCCTGAGGCTCTAATCAGAGATGGGGCACCTT...GAGACTCGCAGGAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCTGGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR CCA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGATGTCCAGTACCTTATaGGCAACAGTCACTCCCCTG +
Preference number: 4 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQMSSTL*ATVTPL
Trigger: CAGGGGAGTGACTGTTGCCCATAAGGTACTGGACAT...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTTCCCACCCTCAACATaGCACCAGGGCTCACCCGCA +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWFPPST*HQGSPA
Trigger: TGCGGGTGAGCCCTGGTGCCATGTTGAGGGTGGGAA...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACATGACGCCCGGTGACTaGGCTCCTGGGGCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHMTPGD*APGAGP
Trigger: TGGACCGGCCCCAGGAGCCCAGTCACCGGGCGTCAT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR CCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGCTGGTCTCAAACTCCTaGCCTCAGATGATCACCCCA +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMLVSNS*PQMITP
Trigger: TGGGGTGATCATCTGAGGCCAGGAGTTTGAGACCAG...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR TCA 90 bp AAATCCCAGAGTCCTCCTAGGATGGAGTACCAGAAGCTGTCTCCTGCGAGTCTCAACACCAGTGGTGAGTaGGAGTCACTCAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: KSQSPPRMEYQKLSPASLNTSGE*ESLNPA
Trigger: GGCAGGATTGAGTGACTCTCACTCACCACTGGTGTT...GAGACTCGCAGGAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCTGGGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR TCA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTACAGATCTCCACATCTaGGATCTCACCATCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSTDLHI*DLTICE
Trigger: CTCACAGATGGTGAGATCTCAGATGTGGAGATCTGT...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR TCA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTCTGGCTTACAAAGCTaGTACCCCAGTGCAACTAGA +
Preference number: 4 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQSGLQS*YPSATR
Trigger: TCTAGTTGCACTGGGGTATCAGCTTTGTAAGCCAGA...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTTTTCTCCATCTGGATaGGTATCCAGCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSFSPSG*VSSRLS
Trigger: AGACAGCCTGCTGGATACTCATCCAGATGGAGAAAA...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGCCTGTAAGCAACATCTaGGGCTGGCTAAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMPVSNI*GWLRDE
Trigger: CTCATCTCTTAGCCAGCCTCAGATGTTGCTTACAGG...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CGGCCACATCCTGAAACGTCAGTGATTCAAGGCTGGCAAATTGGTACTGGCTTTTCTGCCTCAGCCTCCTaGGTAGCTGGGGTTACAGGT +
Preference number: 4 (lower is better)
Translates to: RPHPETSVIQGWQIGTGFSASAS*VAGVTG
Trigger: ACCTGTAACCCCAGCTACTCAGGAGGCTGAGGCAGA...AAAGCCAGTACCAATTTGCCAGCCTTGAATCACTGACGTTTCAGGATGTGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR GCA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGAGGATGGGGAGTTCATaGTGGTGCCAAGCGCCACTT +
Preference number: 4 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRRMGSS*WCQAPL
Trigger: AAGTGGCGCTTGGCACCAGCATGAACTCCCCATCCT...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTTGTTTATGCCGAGTTaGGATGAAGGGGCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQLFMPS*DEGALE
Trigger: TTCAAGAGCCCCTTCATCTCAACTCGGCATAAACAA...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGCTTCTCTCCTGTGTaGTCTTTTTGTGGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMGFSPV*SFCGSK
Trigger: CTTTGACCCACAAAAAGATCACACAGGAGAGAAGCC...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTGGATTTTCCTGTGTTaGTTAAGGTGTGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSWIFLC*LRCALW
Trigger: CCAGAGTGCACACCTTAATCAACACAGGAAAATCCA...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTACCACTGCAGCTCTCCTaGTTCCCACCCTCAACATGG +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLPLQLS*FPPSTW
Trigger: CCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGG...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTATCCTGAAACGTCAGTaGTTCCTGAGATCTCACCAT +
Preference number: 4 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSILKRQ*FLRSHH
Trigger: ATGGTGAGATCTCAGGAATCACTGACGTTTCAGGAT...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR GCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGCCAGAAGCTGTCTCCTaGGAGTCTCTCCATTATCAT +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMPEAVS*ESLHYH
Trigger: ATGATAATGGAGAGACTCGCAGGAGACAGCTTCTGG...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCGTGATCTTGGCTCACTaGAACTTCAGCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTVILAH*NFSLGD
Trigger: GTCACCCAGGCTGAAGTTGCAGTGAGCCAAGATCAC...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR TCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGGAGCAACACCAGTGGTaGGTGAGAGTCACTCAATCC +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWEQHQW*VRVTQS
Trigger: GGATTGAGTGACTCTCACTCACCACTGGTGTTGCTC...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTAAAGGTGCCCCATCTCTaGTTAGAGCCTCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLKVPHL*LEPQEP
Trigger: TGGCTCCTGAGGCTCTAATCAGAGATGGGGCACCTT...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGAGCTGGGGCTGCTCTTaGAAGTTGATGTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWSWGCS*KLMSST
Trigger: GGTACTGGACATCAACTTTCAAGAGCAGCCCCAGCT...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGCTGCTATCTTCTACATaGAAGTCAGCAGATGCACCA +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMLLSST*KSADAP
Trigger: TGGTGCATCTGCTGACTTTCATGTAGAAGATAGCAG...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTCGCAGCCTGAGCCAATaGCGCCCGGTGACTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFRSLSQ*RPVTGL
Trigger: GAGCCCAGTCACCGGGCGTCATTGGCTCAGGCTGCG...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR CCA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGCTAAATGAAGGACTGTaGCGAACAGTTTGCTCACAT +
Preference number: 4 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQLNEGL*RTVCSH
Trigger: ATGTGAGCAAACTGTTCGCCACAGTCCTTCATTTAG...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGAGATCTCACCATCTGTaGGCCATCATTCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMRSHHL*AIIHFF
Trigger: GAAGAAATGAATGATGGCTCACAGATGGTGAGATCT...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGGGCTTCTCTCCTGTGTaGTCTTTTTGTGGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRGFSPV*SFCGSK
Trigger: CTTTGACCCACAAAAAGATCACACAGGAGAGAAGCC...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGAACGTCAGTGATTCCTaGGATCTCACCATCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRNVSDS*DLTICE
Trigger: CTCACAGATGGTGAGATCTCAGGAATCACTGACGTT...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR GCA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGGGGATTACACCTCTCTaGAGTTCTTATGTTGTAATG +
Preference number: 4 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQGITPL*SSYVVM
Trigger: CATTACAACATAAGAACTGCAGAGAGGTGTAATCCC...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCCTCTAGCTCCAACTaGGCGATTACCTCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWSSSSN*AITSGL
Trigger: TAAGCCAGAGGTAATCGCGCAGTTGGAGCTAGAGGA...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTCTCACTGGGTTTCTCTaGAGTATGAATATGATCAGT +
Preference number: 4 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSLTGFL*SMNMIS
Trigger: ACTGATCATATTCATACTGCAGAGAAACCCAGTGAG...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGATGTGAGCCACCGTaGCCAGCCCAGATATATATT +
Preference number: 4 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTRCEPP*PAQIYI
Trigger: AATATATATCTGGGCTGGGCACGGTGGCTCACATCT...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR CCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGCTAAATGAAGGACTGTaGCGAACAGTTTGCTCACAT +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMLNEGL*RTVCSH
Trigger: ATGTGAGCAAACTGTTCGCCACAGTCCTTCATTTAG...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTAAGTCTCCAGAGTAGCTaGGATTGCAGGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLSLQSS*DCRCAP
Trigger: TGGTGCACACCTGCAATCCCAGCTACTCTGGAGACT...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR TCA 90 bp CGGCCACATCCTGAAACGTCAGTGATTCAAGGCTGGCAAATTGGTACTGGCTTTGCTGCTCTTGAAAGTTaGTGTCCAGTACCTTATGGG +
Preference number: 4 (lower is better)
Translates to: RPHPETSVIQGWQIGTGFAALES*CPVPYG
Trigger: CCCATAAGGTACTGGACATCAACTTTCAAGAGCAGC...AAAGCCAGTACCAATTTGCCAGCCTTGAATCACTGACGTTTCAGGATGTGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR TCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGGCTGCTCTTGAAAGTTaGTGTCCAGTACCTTATGGG +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWAALES*CPVPYG
Trigger: CCCATAAGGTACTGGACATCAACTTTCAAGAGCAGC...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGAGCATCCCAACAGAATaGGGTAGAAGTCTTACTGCC +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWSIPTE*GRSLTA
Trigger: GGCAGTAAGACTTCTACCTCATTCTGTTGGGATGCT...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR TCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCTGGCTTACAAAGCTaGTACCCCAGTGCAACTAGA +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWSGLQS*YPSATR
Trigger: TCTAGTTGCACTGGGGTATCAGCTTTGTAAGCCAGA...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp AAATCCCAGAGTCCTCCTAGGATGGAGTACCAGAAGCTGTCTCCTGCGAGTCTCATTCTGGCTTGTGGTTaGCTTTTTGATTTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: KSQSPPRMEYQKLSPASLILACG*LFDFGS
Trigger: AGACCCGAAATCAAAAAGTCAACCACAAGCCAGAAT...GAGACTCGCAGGAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCTGGGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACAGGCTGGCTAAGAGATaGGGTGTGGCTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHRLAKR*GVAEGL
Trigger: AAGGCCTTCAGCCACACCTCATCTCTTAGCCAGCCT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCTGGATTTTCCTGTGTTaGTTAAGGTGTGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTWIFLC*LRCALW
Trigger: CCAGAGTGCACACCTTAATCAACACAGGAAAATCCA...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGTATTTCAAGTTAATGTaGCTGGCTGCACTACAGCAT +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMYFKLM*LAALQH
Trigger: ATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATA...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTAAGAGTCACTCAATCCTaGCTCCTTAGGCCAGGTATG +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLRVTQS*LLRPGM
Trigger: CATACCTGGCCTAAGGAGGCAGGATTGAGTGACTCT...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGATGAAAGTCAGCAGATaGACCAGGACCAGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWMKVSR*TRTSSL
Trigger: TAAGCTGCTGGTCCTGGTGCATCTGCTGACTTTCAT...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTATCCTCTAGCTCCAACTaGGCGATTACCTCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLSSSSN*AITSGL
Trigger: TAAGCCAGAGGTAATCGCGCAGTTGGAGCTAGAGGA...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGGTTTATATAAGCCACTaGAGCTCTCCTGATTCCCAC +
Preference number: 4 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRVYISH*SSPDSH
Trigger: GTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGGATTCAGTCTTCCACTaGGATTACACCTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWDSVFH*DYTSLQ
Trigger: CTGCAGAGAGGTGTAATCCCAGTGGAAGACTGAATC...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTACTTGCCGAGATCCAATaGAGAGCACACAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLLAEIQ*RAHRSP
Trigger: TGGAGATCTGTGTGCTCTCCATTGGATCTCGGCAAG...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR CCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACCGCATTGAAAGTTTATaGCCAGGCGCAGTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHRIESL*PGAVAH
Trigger: GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCG...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR CCA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTTTTATAACCCCTCCTaGGAATGTAATATGCTGCTA +
Preference number: 4 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSFYNPS*ECNMLL
Trigger: TAGCAGCATATTACATTCCCAGGAGGGGTTATAAAA...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR TCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGCTGCTATCTTCTACATaGAAGTCAGCAGATGCACCA +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWLLSST*KSADAP
Trigger: TGGTGCATCTGCTGACTTTCATGTAGAAGATAGCAG...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGATCTCACCATCTGTaGGCCATCATTCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTRSHHL*AIIHFF
Trigger: GAAGAAATGAATGATGGCTCACAGATGGTGAGATCT...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp AAATCCCAGAGTCCTCCTAGGATGGAGTACCAGAAGCTGTCTCCTGCGAGTCTCTTGTGGTTGACTTTTTaGTTTCGGGTCTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: KSQSPPRMEYQKLSPASLLWLTF*FRVCFL
Trigger: GAGAAAACAGACCCGAAATCAAAAAGTCAACCACAA...GAGACTCGCAGGAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCTGGGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR TCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCATGTTGAGTAAAGGATaGATGCTGACGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTMLSKG*MLTEGF
Trigger: AAAGCCTTCCGTCAGCATTCATCCTTTACTCAACAT...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGATGTTGAGTAAAGGATaGATGCTGACGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRMLSKG*MLTEGF
Trigger: AAAGCCTTCCGTCAGCATTCATCCTTTACTCAACAT...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTATTGGTTTCTACGCATTaGAAGTTTATGGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLLVSTH*KFMARR
Trigger: GCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAA...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR GCA 90 bp CGGCCACATCCTGAAACGTCAGTGATTCAAGGCTGGCAAATTGGTACTGGCTTTCCACTCTCAGAATCTTaGCTTGTTTATGCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: RPHPETSVIQGWQIGTGFPLSES*LVYAEL
Trigger: CAACTCGGCATAAACAAGGCAAGATTCTGAGAGTGG...AAAGCCAGTACCAATTTGCCAGCCTTGAATCACTGACGTTTCAGGATGTGGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR GCA 90 bp AAATCCCAGAGTCCTCCTAGGATGGAGTACCAGAAGCTGTCTCCTGCGAGTCTCCTGCCATTTATGATCTaGCTTGAAAGTCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: KSQSPPRMEYQKLSPASLLPFMI*LESHKA
Trigger: AGCTTTGTGACTTTCAAGGCAGATCATAAATGGCAG...GAGACTCGCAGGAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCTGGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR GCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTACCAGAAGCTGTCTCCTaGGAGTCTCTCCATTATCAT +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLPEAVS*ESLHYH
Trigger: ATGATAATGGAGAGACTCGCAGGAGACAGCTTCTGG...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGCTGTGGCGAACAGTTTaGTCACATTTATATTCACAT +
Preference number: 4 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMLWRTV*SHLYSH
Trigger: ATGTGAATATAAATGTGAGCAAACTGTTCGCCACAG...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp CGGCCACATCCTGAAACGTCAGTGATTCAAGGCTGGCAAATTGGTACTGGCTTTGTTAATGTGACTGGCTaGACTACAGCATCGCCTTTA +
Preference number: 4 (lower is better)
Translates to: RPHPETSVIQGWQIGTGFVNVTG*TTASPL
Trigger: TAAAGGCGATGCTGTAGTGCAGCCAGTCACATTAAC...AAAGCCAGTACCAATTTGCCAGCCTTGAATCACTGACGTTTCAGGATGTGGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR CCA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTTCTTGGTTAAACTCTaGATGGTAATCAAAATCCCA +
Preference number: 4 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSFLVKL*MVIKIP
Trigger: TGGGATTTTGATTACCATCCAGAGTTTAACCAAGAA...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACAGTCTCCAGAGTAGCTaGGATTGCAGGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHSLQSS*DCRCAP
Trigger: TGGTGCACACCTGCAATCCCAGCTACTCTGGAGACT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGATTCTGGCTTGTGGTTaGCTTTTTGATTTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWILACG*LFDFGS
Trigger: AGACCCGAAATCAAAAAGTCAACCACAAGCCAGAAT...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCCTGCTGCATAAGGTTTaGGTTCAGATTACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTLLHKV*VQITVF
Trigger: GAAAACTGTAATCTGAACTCAAACCTTATGCAGCAG...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACCCTGTAAGCAACATCTaGGGCTGGCTAAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHPVSNI*GWLRDE
Trigger: CTCATCTCTTAGCCAGCCTCAGATGTTGCTTACAGG...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTATTATGTGCTGCTAAATaGAGGACTGTGGCGAACAGT +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLLCAAK*RTVANS
Trigger: ACTGTTCGCCACAGTCCTTCATTTAGCAGCACATAA...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACAGAGTCACTCAATCCTaGCTCCTTAGGCCAGGTATG +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHRVTQS*LLRPGM
Trigger: CATACCTGGCCTAAGGAGGCAGGATTGAGTGACTCT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR GCA 90 bp AAATCCCAGAGTCCTCCTAGGATGGAGTACCAGAAGCTGTCTCCTGCGAGTCTCTATAGTATTCAAATCTaGATCCTGGCAAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: KSQSPPRMEYQKLSPASLYSIQI*ILARIL
Trigger: CAAGATCCTTGCCAGGATGCAGATTTGAATACTATA...GAGACTCGCAGGAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCTGGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR GCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACCACAAGAATAATTTCTaGTTCCAGGGGCGGCCACTC +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHHKNNF*FQGRPL
Trigger: GAGTGGCCGCCCCTGGAAGCAGAAATTATTCTTGTG...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR GCA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCATGTCGCCAAAGCTCTaGTATCTTCTACATGAAAGT +
Preference number: 4 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTMSPKL*YLLHES
Trigger: ACTTTCATGTAGAAGATAGCAGAGCTTTGGCGACAT...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGGGGATTACACCTCTCTaGAGTTCTTATGTTGTAATG +
Preference number: 4 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRGITPL*SSYVVM
Trigger: CATTACAACATAAGAACTGCAGAGAGGTGTAATCCC...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTCCTCTAGCTCCAACTaGGCGATTACCTCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHSSSSN*AITSGL
Trigger: TAAGCCAGAGGTAATCGCGCAGTTGGAGCTAGAGGA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR GCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTATTCAAGTCATTCTCATaGCTCAGTCTCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLFKSFS*LSLQSS
Trigger: GCTACTCTGGAGACTGAGGCATGAGAATGACTTGAA...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR CCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTATCTGTTTTCTCCATCTaGATGAGTATCCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLSVFSI*MSIQQA
Trigger: AGCCTGCTGGATACTCATCCAGATGGAGAAAACAGA...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACAGAGTCCTCCTAGGATaGAGTACCAGAAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHRVLLG*STRSCL
Trigger: GAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTCTGGCTTACAAAGCTaGTACCCCAGTGCAACTAGA +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHSGLQS*YPSATR
Trigger: TCTAGTTGCACTGGGGTATCAGCTTTGTAAGCCAGA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTTTTCTCCATCTGGATaGGTATCCAGCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHFSPSG*VSSRLS
Trigger: AGACAGCCTGCTGGATACTCATCCAGATGGAGAAAA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACGGCTTCTCTCCTGTGTaGTCTTTTTGTGGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHGFSPV*SFCGSK
Trigger: CTTTGACCCACAAAAAGATCACACAGGAGAGAAGCC...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp CGGCCACATCCTGAAACGTCAGTGATTCAAGGCTGGCAAATTGGTACTGGCTTTTATTTCAAGTTAATGTaGCTGGCTGCACTACAGCAT +
Preference number: 4 (lower is better)
Translates to: RPHPETSVIQGWQIGTGFYFKLM*LAALQH
Trigger: ATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATA...AAAGCCAGTACCAATTTGCCAGCCTTGAATCACTGACGTTTCAGGATGTGGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACAACGTCAGTGATTCCTaGGATCTCACCATCTGTGAG +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHNVSDS*DLTICE
Trigger: CTCACAGATGGTGAGATCTCAGGAATCACTGACGTT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTTGGTTTCTACGCATTaGAAGTTTATGGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHLVSTH*KFMARR
Trigger: GCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR GCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACCCAGAAGCTGTCTCCTaGGAGTCTCTCCATTATCAT +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHPEAVS*ESLHYH
Trigger: ATGATAATGGAGAGACTCGCAGGAGACAGCTTCTGG...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR CCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTAAGCCTCAGGAGCCAATaGATAGCCACAAGAATAATT +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLSLRSQ*IATRII
Trigger: AATTATTCTTGTGGCTATCCATTGGCTCCTGAGGCT...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTGAGCAACACCAGTGGTaGGTGAGAGTCACTCAATCC +
Preference number: 4 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFEQHQW*VRVTQS
Trigger: GGATTGAGTGACTCTCACTCACCACTGGTGTTGCTC...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTAGCTGGGGCTGCTCTTaGAAGTTGATGTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFSWGCS*KLMSST
Trigger: GGTACTGGACATCAACTTTCAAGAGCAGCCCCAGCT...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGATTTATGATCTGCCTTaGAAGTCACAAAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWIYDLP*KSQSFA
Trigger: TGCAAAGCTTTGTGACTTTCAAGGCAGATCATAAAT...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR TCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTATTGTGGTTGACTTTTTaGTTTCGGGTCTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLLWLTF*FRVCFL
Trigger: GAGAAAACAGACCCGAAATCAAAAAGTCAACCACAA...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTACTGCTGCATAAGGTTTaGGTTCAGATTACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLLLHKV*VQITVF
Trigger: GAAAACTGTAATCTGAACTCAAACCTTATGCAGCAG...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTGGATTTTCCTGTGTTaGTTAAGGTGTGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHWIFLC*LRCALW
Trigger: CCAGAGTGCACACCTTAATCAACACAGGAAAATCCA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTTATGTGCTGCTAAATaGAGGACTGTGGCGAACAGT +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHLCAAK*RTVANS
Trigger: ACTGTTCGCCACAGTCCTTCATTTAGCAGCACATAA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACATCCTGAAACGTCAGTaGTTCCTGAGATCTCACCAT +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHILKRQ*FLRSHH
Trigger: ATGGTGAGATCTCAGGAATCACTGACGTTTCAGGAT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR GCA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTCACAAGAATAATTTCTaGTTCCAGGGGCGGCCACTC +
Preference number: 4 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPHKNNF*FQGRPL
Trigger: GAGTGGCCGCCCCTGGAAGCAGAAATTATTCTTGTG...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACGTTTATATAAGCCACTaGAGCTCTCCTGATTCCCAC +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHVYISH*SSPDSH
Trigger: GTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR GCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTTCAAGTCATTCTCATaGCTCAGTCTCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHFKSFS*LSLQSS
Trigger: GCTACTCTGGAGACTGAGGCATGAGAATGACTTGAA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR CCA 90 bp CGGCCACATCCTGAAACGTCAGTGATTCAAGGCTGGCAAATTGGTACTGGCTTTTTCAAATCTGCATCCTaGCAAGGATCTTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: RPHPETSVIQGWQIGTGFFKSAS*QGSCKI
Trigger: TATCTTACAAGATCCTTGCCAGGATGCAGATTTGAA...AAAGCCAGTACCAATTTGCCAGCCTTGAATCACTGACGTTTCAGGATGTGGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR CCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTCTGTTTTCTCCATCTaGATGAGTATCCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHSVFSI*MSIQQA
Trigger: AGCCTGCTGGATACTCATCCAGATGGAGAAAACAGA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR CCA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTAGAGTCCTCCTAGGATaGAGTACCAGAAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPRVLLG*STRSCL
Trigger: GAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCT...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGTTCTTGGTTAAACTCTaGATGGTAATCAAAATCCCA +
Preference number: 4 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRFLVKL*MVIKIP
Trigger: TGGGATTTTGATTACCATCCAGAGTTTAACCAAGAA...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTGTGTGATCTTTTTGTaGGTCAAAGTTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWCVIFL*VKVTCP
Trigger: AGGACAAGTAACTTTGACCCACAAAAAGATCACACA...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACGTGCACCACCATGCCTaGATAAGGACTTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHVHHHA*IRTSDF
Trigger: AAAATCAGAAGTCCTTATCCAGGCATGGTGGTGCAC...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACAGATCTCACCATCTGTaGGCCATCATTCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHRSHHL*AIIHFF
Trigger: GAAGAAATGAATGATGGCTCACAGATGGTGAGATCT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACATTCTGGCTTGTGGTTaGCTTTTTGATTTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHILACG*LFDFGS
Trigger: AGACCCGAAATCAAAAAGTCAACCACAAGCCAGAAT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACATGTTGAGTAAAGGATaGATGCTGACGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHMLSKG*MLTEGF
Trigger: AAAGCCTTCCGTCAGCATTCATCCTTTACTCAACAT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR CCA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTATTCAAATCTGCATCCTaGCAAGGATCTTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLFKSAS*QGSCKI
Trigger: TATCTTACAAGATCCTTGCCAGGATGCAGATTTGAA...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTGATTCAGTCTTCCACTaGGATTACACCTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPDSVFH*DYTSLQ
Trigger: CTGCAGAGAGGTGTAATCCCAGTGGAAGACTGAATC...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTTCAAGGCTGGCAAATTaGTACTGGCTTTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFSRLAN*YWLSAG
Trigger: CCCAGCTGAAAGCCAGTACCAATTTGCCAGCCTTGA...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR CCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTAGAGTCCTCCTAGGATaGAGTACCAGAAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFRVLLG*STRSCL
Trigger: GAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCT...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACCTAAATGAAGGACTGTaGCGAACAGTTTGCTCACAT +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHLNEGL*RTVCSH
Trigger: ATGTGAGCAAACTGTTCGCCACAGTCCTTCATTTAG...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTTGTGGTTGACTTTTTaGTTTCGGGTCTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHLWLTF*FRVCFL
Trigger: GAGAAAACAGACCCGAAATCAAAAAGTCAACCACAA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR TCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACCTGCTGCATAAGGTTTaGGTTCAGATTACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHLLHKV*VQITVF
Trigger: GAAAACTGTAATCTGAACTCAAACCTTATGCAGCAG...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR GCA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTATCTTGCCTTGTTTATaGCGAGTTGAGATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPILPCL*RVEMKG
Trigger: CCCCTTCATCTCAACTCGGCATAAACAAGGCAAGAT...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTATGAAAGTCAGCAGATaGACCAGGACCAGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFMKVSR*TRTSSL
Trigger: TAAGCTGCTGGTCCTGGTGCATCTGCTGACTTTCAT...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACCTCACTGGGTTTCTCTaGAGTATGAATATGATCAGT +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHLTGFL*SMNMIS
Trigger: ACTGATCATATTCATACTGCAGAGAAACCCAGTGAG...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR GCA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTGTTAATGTGACTGGCTaGACTACAGCATCGCCTTTA +
Preference number: 4 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPVNVTG*TTASPL
Trigger: TAAAGGCGATGCTGTAGTGCAGCCAGTCACATTAAC...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTGTGCACCACCATGCCTaGATAAGGACTTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPVHHHA*IRTSDF
Trigger: AAAATCAGAAGTCCTTATCCAGGCATGGTGGTGCAC...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR TCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTTTGTTTATGCCGAGTTaGGATGAAGGGGCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFLFMPS*DEGALE
Trigger: TTCAAGAGCCCCTTCATCTCAACTCGGCATAAACAA...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTCCACTCTCAGAATCTTaGCTTGTTTATGCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFPLSES*LVYAEL
Trigger: CAACTCGGCATAAACAAGGCAAGATTCTGAGAGTGG...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACCTGTGGCGAACAGTTTaGTCACATTTATATTCACAT +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHLWRTV*SHLYSH
Trigger: ATGTGAATATAAATGTGAGCAAACTGTTCGCCACAG...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR CCA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTAGCCTCAGGAGCCAATaGATAGCCACAAGAATAATT +
Preference number: 4 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPSLRSQ*IATRII
Trigger: AATTATTCTTGTGGCTATCCATTGGCTCCTGAGGCT...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTGTGTGATCTTTTTGTaGGTCAAAGTTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHCVIFL*VKVTCP
Trigger: AGGACAAGTAACTTTGACCCACAAAAAGATCACACA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR CCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTTTTATAACCCCTCCTaGGAATGTAATATGCTGCTA +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHFYNPS*ECNMLL
Trigger: TAGCAGCATATTACATTCCCAGGAGGGGTTATAAAA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR GCA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTCTCACTGGGTTTCTCTaGAGTATGAATATGATCAGT +
Preference number: 4 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPLTGFL*SMNMIS
Trigger: ACTGATCATATTCATACTGCAGAGAAACCCAGTGAG...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CCA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTTCTTGGTTAAACTCTaGATGGTAATCAAAATCCCA +
Preference number: 4 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHFLVKL*MVIKIP
Trigger: TGGGATTTTGATTACCATCCAGAGTTTAACCAAGAA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR GCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTATGTCGCCAAAGCTCTaGTATCTTCTACATGAAAGT +
Preference number: 4 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFMSPKL*YLLHES
Trigger: ACTTTCATGTAGAAGATAGCAGAGCTTTGGCGACAT...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTATCATCACAGGATATTaGCACAAACTATCACACTGT +
Preference number: 4 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPIITGY*HKLSHC
Trigger: ACAGTGTGATAGTTTGTGGCAATATCCTGTGATGAT...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR TCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTGATAGAATTTTAGGTTaGAGACCCAAAACACCTGAT +
Preference number: 4 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFDRILG*RPKTPD
Trigger: ATCAGGTGTTTTGGGTCTTCAACCTAAAATTCTATC...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR GCA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTATCATCACAGGATATTaGCACAAACTATCACACTGT +
Preference number: 4 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFIITGY*HKLSHC
Trigger: ACAGTGTGATAGTTTGTGGCAATATCCTGTGATGAT...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS CCA 90 bp AAGGTGCCGAGGGCCCCGCAGCCTGAGCCAATGACGCCCGGTGACTaGGCTCCTGGGGCCGGTCCAGCCACCGGCGCGCCAGACCTGCTC +
Preference number: 5 (lower is better)
Translates to: KVPRAPQPEPMTPGD*APGAGPATGAPDLL
Trigger: GAGCAGGTCTGGCGCGCCGGTGGCTGGACCGGCCCCAGGAGCCCAGTCACCGGGCGTCATTGGCTCAGGCTGCGGGGCCCTCGGCACCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000466630.5
CDS-3UTR CAA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTACAGTGGCGTGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQYSGVI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCACGCCACTGTA...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR CAA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGGAGCTGGGGCTGCTCTaGAAAGTTGATGTCCAGTAC +
Preference number: 5 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQELGLL*KVDVQY
Trigger: GTACTGGACATCAACTTTCAAGAGCAGCCCCAGCTC...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGCTAGGGCTGTGGGCCTaGGCTCCTCTCCATATGGGC +
Preference number: 5 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWLGLWA*APLHMG
Trigger: GCCCATATGGAGAGGAGCCAAGGCCCACAGCCCTAG...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS TCA 90 bp AGCAGATGCACCAGGACCAGCAGCTTAAGGAGCTGGGGCTGCTCTTaGAAGTTGATGTCCAGTACCTTATGGGCAACAGTCACTCCCCTG +
Preference number: 5 (lower is better)
Translates to: SRCTRTSSLRSWGCS*KLMSSTLWATVTPL
Trigger: CAGGGGAGTGACTGTTGCCCATAAGGTACTGGACATCAACTTTCAAGAGCAGCCCCAGCTCCTTAAGCTGCTGGTCCTGGTGCATCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
CDS-3UTR CAA 90 bp AAATCCCAGAGTCCTCCTAGGATGGAGTACCAGAAGCTGTCTCCTGCGAGTCTCTTCAAGGCTGGCAAATaGGTACTGGCTTTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: KSQSPPRMEYQKLSPASLFKAGK*VLAFSW
Trigger: CCAGCTGAAAGCCAGTACCAATTTGCCAGCCTTGAA...GAGACTCGCAGGAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCTGGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR CAA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGTCGATAGAGGTTCTTTaGGGCAGGGTACAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRSIEVL*GRVQLV
Trigger: GACCAGCTGTACCCTGCCCAAAAGAACCTCTATCGA...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGGAGCTGGGGCTGCTCTaGAAAGTTGATGTCCAGTAC +
Preference number: 5 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWELGLL*KVDVQY
Trigger: GTACTGGACATCAACTTTCAAGAGCAGCCCCAGCTC...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp ACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGAAACACCTGATGGGATaGCTGAGGATGGGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: TSPSSTVIRGGMGILSLWKHLMG*LRMGSS
Trigger: TGAACTCCCCATCCTCAGCAATCCCATCAGGTGTTT...CCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGGAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTAAGTCTGAATTATGTTaGATGCTGTTTCCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSKSELC*MLFPCV
Trigger: CACACAGGGAAACAGCATCAAACATAATTCAGACTT...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp CCTCAACATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTATGAGTTCTTTCATGTaGATTCAGATGTGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PQHGTRAHPQVQFLTSPSMSSFM*IQMCPL
Trigger: CAGAGGACACATCTGAATCAACATGAAAGAACTCAT...AGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCATGTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTATACAGTGGCGTGATCTaGGCTCACTGCAACTTCAGC +
Preference number: 5 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLYSGVI*AHCNFS
Trigger: GCTGAAGTTGCAGTGAGCCAAGATCACGCCACTGTA...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS TCA 90 bp ACAAAAACTTTGCAGGCTTCTACTAGTTCAGGAAATAAACCCACGTaGACGGCTTCCGGTTTCACAGGGATGCCATCCTCACCCAGTGCA +
Preference number: 5 (lower is better)
Translates to: TKTLQASTSSGNKPT*TASGFTGMPSSPSA
Trigger: TGCACTGGGTGAGGATGGCATCCCTGTGAAACCGGAAGCCGTTCACGTGGGTTTATTTCCTGAACTAGTAGAAGCCTGCAAAGTTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466630.5
CDS-3UTR CAA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGTCCTGTGTGATCTTTTaGTGGGTCAAAGTTACTTGT +
Preference number: 5 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMSCVIF*WVKVTC
Trigger: ACAAGTAACTTTGACCCACAAAAAGATCACACAGGA...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGATGAGTTCTTTCATGTaGATTCAGATGTGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMMSSFM*IQMCPL
Trigger: CAGAGGACACATCTGAATCAACATGAAAGAACTCAT...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGACTGTGGCGAACAGTTaGCTCACATTTATATTCACA +
Preference number: 5 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMTVANS*LTFIFT
Trigger: TGTGAATATAAATGTGAGCAAACTGTTCGCCACAGT...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp CCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGTGATACGGGGTGGCATGAATCATCACAGGATATaGCCACAAACTATCACACTG +
Preference number: 5 (lower is better)
Translates to: PQVQFLTSPSSTVIRGGMNHHRI*PQTITL
Trigger: CAGTGTGATAGTTTGTGGCAATATCCTGTGATGATT...CATGCCACCCCGTATCACTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCTTTGGTTTCTACGCATaGAAAGTTTATGGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTFGFYA*KVYGQA
Trigger: CGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAA...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS-3UTR CAA 90 bp ATGGCACCAGGGCTCACCCGCAGGTACAGTTCCTCACTTCTCCATCTTCCACAGGTGAGTAATTACAAGTaGTTGCCTATAGGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: MAPGLTRRYSSSLLHLPQVSNYK*LPIGFL
Trigger: AAGAAAGCCTATAGGCAACAACTTGTAATTACTCAC...CTGTGGAAGATGGAGAAGTGAGGAACTGTACCTGCGGGTGAGCCCTGGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS TCA 90 bp TTATGGGCAACAGTCACTCCCCTGGTACTAAAGGTGCCCCATCTCTaGTTAGAGCCTCAGGAGCCAATGGATAGCCACAAGAATAATTTC +
Preference number: 5 (lower is better)
Translates to: LWATVTPLVLKVPHL*LEPQEPMDSHKNNF
Trigger: GAAATTATTCTTGTGGCTATCCATTGGCTCCTGAGGCTCTAATCAGAGATGGGGCACCTTTAGTACCAGGGGAGTGACTGTTGCCCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
ENST00000484120.1
CDS GCA 90 bp TTTCTGCTTCCAGGGGCGGCCACTCTCAGAATCTTGCCTTGTTTATaGCGAGTTGAGATGAAGGGGCTCTTGAAGGTTGTTATTACCTTT +
Preference number: 5 (lower is better)
Translates to: FLLPGAATLRILPCL*RVEMKGLLKVVITF
Trigger: AAAGGTAATAACAACCTTCAAGAGCCCCTTCATCTCAACTCGGCATAAACAAGGCAAGATTCTGAGAGTGGCCGCCCCTGGAAGCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
ENST00000484120.1
CDS CCA 90 bp AGAGAGGCTGGAAGGGACAAGAATCGTGTGCATCACAAGCCAGGGTaGAAGAACATTTCAAGAAGGGAAAGTCAACACAATCCTAACTGG +
Preference number: 5 (lower is better)
Translates to: REAGRDKNRVHHKPG*KNISRRESQHNPNW
Trigger: CCAGTTAGGATTGTGTTGACTTTCCCTTCTTGAAATGTTCTTCCACCCTGGCTTGTGATGCACACGATTCTTGTCCCTTCCAGCCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466630.5
CDS-3UTR CAA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTAGCCACTCTCAGAATCTaGCCTTGTTTATGCCGAGTT +
Preference number: 5 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLATLRI*PCLCRV
Trigger: AACTCGGCATAAACAAGGCAAGATTCTGAGAGTGGC...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp GTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCAGGGGCATAACTTCCTTTTaGAGTCTCTCGATTCAGTCT +
Preference number: 5 (lower is better)
Translates to: VYISHCSSPDSHPQHGTRGITSF*SLSIQS
Trigger: AGACTGAATCGAGAGACTCAAAAAGGAAGTTATGCC...CCTGGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTCGATAGAGGTTCTTTaGGGCAGGGTACAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHSIEVL*GRVQLV
Trigger: GACCAGCTGTACCCTGCCCAAAAGAACCTCTATCGA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR CAA 90 bp GGTGTTTATATAAGCCACTGCAGCTCTCCTGATTCCCACCCTCAACATGGCACCATGGATTTTCCTGTGTaGATTAAGGTGTGCACTCTG +
Preference number: 5 (lower is better)
Translates to: GVYISHCSSPDSHPQHGTMDFPV*IKVCTL
Trigger: CAGAGTGCACACCTTAATCAACACAGGAAAATCCAT...GGTGCCATGTTGAGGGTGGGAATCAGGAGAGCTGCAGTGGCTTATATAAACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS GCA 90 bp ATTACACCTCTCTGCAGTTCTTATGTTGTAATGTCGCCAAAGCTCTaGTATCTTCTACATGAAAGTCAGCAGATGCACCAGGACCAGCAG +
Preference number: 5 (lower is better)
Translates to: ITPLCSSYVVMSPKL*YLLHESQQMHQDQQ
Trigger: CTGCTGGTCCTGGTGCATCTGCTGACTTTCATGTAGAAGATAGCAGAGCTTTGGCGACATTACAACATAAGAACTGCAGAGAGGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
CDS GCA 90 bp GCATCCCAACAGAATGAGGTAGAAGTCTTACTGCCATTTATGATCTaGCTTGAAAGTCACAAAGCTTTGCATCCTCCAGTCACAGCCTTG +
Preference number: 5 (lower is better)
Translates to: ASQQNEVEVLLPFMI*LESHKALHPPVTAL
Trigger: CAAGGCTGTGACTGGAGGATGCAAAGCTTTGTGACTTTCAAGGCAGATCATAAATGGCAGTAAGACTTCTACCTCATTCTGTTGGGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR CAA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTAGGCATAACTTCCTTTTaGAGTCTCTCGATTCAGTCT +
Preference number: 5 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLGITSF*SLSIQS
Trigger: AGACTGAATCGAGAGACTCAAAAAGGAAGTTATGCC...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp CGGCCACATCCTGAAACGTCAGTGATTCAAGGCTGGCAAATTGGTACTGGCTTTAATCATCACAGGATATaGCCACAAACTATCACACTG +
Preference number: 5 (lower is better)
Translates to: RPHPETSVIQGWQIGTGFNHHRI*PQTITL
Trigger: CAGTGTGATAGTTTGTGGCAATATCCTGTGATGATT...AAAGCCAGTACCAATTTGCCAGCCTTGAATCACTGACGTTTCAGGATGTGGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS TCA 90 bp TCTTCCTCTAGCTCCAACTGCGCGATTACCTCTGGCTTACAAAGCTaGTACCCTATTCACAGGAGTAACATACATCTTAGGAGTTTGTAC +
Preference number: 5 (lower is better)
Translates to: SSSSSNCAITSGLQS*YPIHRSNIHLRSLY
Trigger: GTACAAACTCCTAAGATGTATGTTACTCCTGTGAATAGGGTATCAGCTTTGTAAGCCAGAGGTAATCGCGCAGTTGGAGCTAGAGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466630.5
CDS CCA 90 bp TATTCCTTATATCCCAGAGGGAGATTTTTGGAACACTCCACTGAGTaGTTCAGAAGTGGCTGTTTTCCCTCATTAAGTAGCAGTGCCCAA +
Preference number: 5 (lower is better)
Translates to: YSLYPRGRFLEHSTE*FRSGCFPSLSSSAQ
Trigger: TTGGGCACTGCTACTTAATGAGGGAAAACAGCCACTTCTGAACCACTCAGTGGAGTGTTCCAAAAATCTCCCTCTGGGATATAAGGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466630.5
CDS-3UTR CAA 90 bp CCATCTTCCACAGTGATACGGGGTGGCATGGGAATTCTTAGTCTCTGGTCATTAACTGTGGCGAACAGTTaGCTCACATTTATATTCACA +
Preference number: 5 (lower is better)
Translates to: PSSTVIRGGMGILSLWSLTVANS*LTFIFT
Trigger: TGTGAATATAAATGTGAGCAAACTGTTCGCCACAGT...TAATGACCAGAGACTAAGAATTCCCATGCCACCCCGTATCACTGTGGAAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTCGCAGTTTTACCATATaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPRSFTI*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAATATGGTAAAACTGCG...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS-3UTR CAA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTTTGGTTTCTACGCATaGAAAGTTTATGGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHFGFYA*KVYGQA
Trigger: CGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR CAA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTGCCACTCTCAGAATCTaGCCTTGTTTATGCCGAGTT +
Preference number: 5 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPATLRI*PCLCRV
Trigger: AACTCGGCATAAACAAGGCAAGATTCTGAGAGTGGC...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACATGGATTTTCCTGTGTaGATTAAGGTGTGCACTCTG +
Preference number: 5 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHMDFPV*IKVCTL
Trigger: CAGAGTGCACACCTTAATCAACACAGGAAAATCCAT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS GCA 90 bp TTTTTGAGTCTCTCGATTCAGTCTTCCACTGGGATTACACCTCTCTaGAGTTCTTATGTTGTAATGTCGCCAAAGCTCTGCTATCTTCTA +
Preference number: 5 (lower is better)
Translates to: FLSLSIQSSTGITPL*SSYVVMSPKLCYLL
Trigger: TAGAAGATAGCAGAGCTTTGGCGACATTACAACATAAGAACTGCAGAGAGGTGTAATCCCAGTGGAAGACTGAATCGAGAGACTCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
CDS CCA 90 bp AGAAGGCATAACTTCCTTTTTGAGTCTCTCGATTCAGTCTTCCACTaGGATTACACCTCTCTGCAGTTCTTATGTTGTAATGTCGCCAAA +
Preference number: 5 (lower is better)
Translates to: RRHNFLFESLDSVFH*DYTSLQFLCCNVAK
Trigger: TTTGGCGACATTACAACATAAGAACTGCAGAGAGGTGTAATCCCAGTGGAAGACTGAATCGAGAGACTCAAAAAGGAAGTTATGCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
CDS-3UTR CAA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACTCCTGTGTGATCTTTTaGTGGGTCAAAGTTACTTGT +
Preference number: 5 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHSCVIF*WVKVTC
Trigger: ACAAGTAACTTTGACCCACAAAAAGATCACACAGGA...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR CAA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACAAGTCTGAATTATGTTaGATGCTGTTTCCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHKSELC*MLFPCV
Trigger: CACACAGGGAAACAGCATCAAACATAATTCAGACTT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR CAA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACATGAGTTCTTTCATGTaGATTCAGATGTGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHMSSFM*IQMCPL
Trigger: CAGAGGACACATCTGAATCAACATGAAAGAACTCAT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR CAA 90 bp AAATTAATTTGGTTTCTACGCATTGAAAGTTTATGGCCAGGCGCAGTGGCCCACACTGTGGCGAACAGTTaGCTCACATTTATATTCACA +
Preference number: 5 (lower is better)
Translates to: KLIWFLRIESLWPGAVAHTVANS*LTFIFT
Trigger: TGTGAATATAAATGTGAGCAAACTGTTCGCCACAGT...GTGGGCCACTGCGCCTGGCCATAAACTTTCAATGCGTAGAAACCAAATTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000633730.1
CDS-3UTR CAA 90 bp CCTCTTTTATGTTTATTTCAAGTTAATGTGACTGGCTGCACTACAGCATCGCCTCGCCCCCAGCCAGCATaGTCTTTAATTAATCAAAAT +
Preference number: 5 (lower is better)
Translates to: PLLCLFQVNVTGCTTASPRPQPA*SLINQN
Trigger: ATTTTGATTAATTAAAGACAATGCTGGCTGGGGGCG...AGGCGATGCTGTAGTGCAGCCAGTCACATTAACTTGAAATAAACATAAAAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS GCA 90 bp ATTAGCATTCTTCTATCCCAGCCCAAACTATATTCACAAAAACTTTaGAGGCTTCTACTAGTTCAGGAAATAAACCCACGTGAACGGCTT +
Preference number: 5 (lower is better)
Translates to: ISILLSQPKLYSQKL*RLLLVQEINPRERL
Trigger: AAGCCGTTCACGTGGGTTTATTTCCTGAACTAGTAGAAGCCTGCAAAGTTTTTGTGAATATAGTTTGGGCTGGGATAGAAGAATGCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466630.5
CDS-3UTR CAA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTATGGATTTTCCTGTGTaGATTAAGGTGTGCACTCTG +
Preference number: 5 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFMDFPV*IKVCTL
Trigger: CAGAGTGCACACCTTAATCAACACAGGAAAATCCAT...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS-3UTR CAA 90 bp GGATATTGCCACAAACTATCACACTGTTTCTCAAACAACGGCACACAAGATTTTTCCTGTGTGATCTTTTaGTGGGTCAAAGTTACTTGT +
Preference number: 5 (lower is better)
Translates to: GYCHKLSHCFSNNGTQDFSCVIF*WVKVTC
Trigger: ACAAGTAACTTTGACCCACAAAAAGATCACACAGGA...AAAATCTTGTGTGCCGTTGTTTGAGAAACAGTGTGATAGTTTGTGGCAATATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411863.2
ENST00000429591.4
CDS CCA 72 bp AGGGCCCCGCAGCCTGAGCCAATGACGCCCGGTGACTaGGCTCCTGGGGCCGGTCCAGCCACCGGCGCGCCA +
Preference number: 6 (lower is better)
Translates to: RAPQPEPMTPGD*APGAGPATGAP
Trigger: TGGCGCGCCGGTGGCTGGACCGGCCCCAGGAGCCCAGTCACCGGGCGTCATTGGCTCAGGCTGCGGGGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429591.4
ENST00000466630.5
CDS TCA 72 bp GGGGCCGGTCCAGCCACCGGCGCGCCAGACCTGCTCTaGGGACAGCCTCCCCGCAATGGCGGCGCAAGACGC +
Preference number: 6 (lower is better)
Translates to: GAGPATGAPDLL*GQPPRNGGARR
Trigger: GCGTCTTGCGCCGCCATTGCGGGGAGGCTGTCCTCAGAGCAGGTCTGGCGCGCCGGTGGCTGGACCGGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS GCA 72 bp CTCCTGGGGCCGGTCCAGCCACCGGCGCGCCAGACCTaGTCTGAGGACAGCCTCCCCGCAATGGCGGCGCAA +
Preference number: 6 (lower is better)
Translates to: LLGPVQPPARQT*SEDSLPAMAAQ
Trigger: TTGCGCCGCCATTGCGGGGAGGCTGTCCTCAGAGCAGGTCTGGCGCGCCGGTGGCTGGACCGGCCCCAGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429591.4
CDS CAA 90 bp CAGCAGATGCACCAGGACCAGCAGCTTAAGGAGCTGGGGCTGCTCTaGAAAGTTGATGTCCAGTACCTTATGGGCAACAGTCACTCCCCT +
Preference number: 6 (lower is better)
Translates to: QQMHQDQQLKELGLL*KVDVQYLMGNSHSP
Trigger: AGGGGAGTGACTGTTGCCCATAAGGTACTGGACATCAACTTTCAAGAGCAGCCCCAGCTCCTTAAGCTGCTGGTCCTGGTGCATCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
CDS TCA 72 bp GTGCCAAGCGCCACTTTCAAAGAGCAACACCAGTGGTaGGTGAGAGTCACTCAATCCTGCCTCCTTAGGCCA +
Preference number: 6 (lower is better)
Translates to: VPSATFKEQHQW*VRVTQSCLLRP
Trigger: TGGCCTAAGGAGGCAGGATTGAGTGACTCTCACTCACCACTGGTGTTGCTCTTTGAAAGTGGCGCTTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
ENST00000484120.1
CDS TCA 72 bp CAAGCGCCACTTTCAAAGAGCAACACCAGTGGTGAGTaGGAGTCACTCAATCCTGCCTCCTTAGGCCAGGTA +
Preference number: 6 (lower is better)
Translates to: QAPLSKSNTSGE*ESLNPASLGQV
Trigger: TACCTGGCCTAAGGAGGCAGGATTGAGTGACTCTCACTCACCACTGGTGTTGCTCTTTGAAAGTGGCGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
ENST00000484120.1
CDS TCA 72 bp ACCAGGACCAGCAGCTTAAGGAGCTGGGGCTGCTCTTaGAAGTTGATGTCCAGTACCTTATGGGCAACAGTC +
Preference number: 6 (lower is better)
Translates to: TRTSSLRSWGCS*KLMSSTLWATV
Trigger: GACTGTTGCCCATAAGGTACTGGACATCAACTTTCAAGAGCAGCCCCAGCTCCTTAAGCTGCTGGTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
CDS GCA 72 bp CAAAGCTCTGCTATCTTCTACATGAAAGTCAGCAGATaGACCAGGACCAGCAGCTTAAGGAGCTGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: QSSAIFYMKVSR*TRTSSLRSWGC
Trigger: GCAGCCCCAGCTCCTTAAGCTGCTGGTCCTGGTGCATCTGCTGACTTTCATGTAGAAGATAGCAGAGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
CDS CAA 72 bp CACCAGGACCAGCAGCTTAAGGAGCTGGGGCTGCTCTaGAAAGTTGATGTCCAGTACCTTATGGGCAACAGT +
Preference number: 6 (lower is better)
Translates to: HQDQQLKELGLL*KVDVQYLMGNS
Trigger: ACTGTTGCCCATAAGGTACTGGACATCAACTTTCAAGAGCAGCCCCAGCTCCTTAAGCTGCTGGTCCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
CDS CCA 72 bp TTTGCATCCTCCAGTCACAGCCTTGCCGAGATCCAATaGAGAGCACACAGATCTCCACATCTGAGATCTCAC +
Preference number: 6 (lower is better)
Translates to: FASSSHSLAEIQ*RAHRSPHLRSH
Trigger: GTGAGATCTCAGATGTGGAGATCTGTGTGCTCTCCATTGGATCTCGGCAAGGCTGTGACTGGAGGATGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS CAA 72 bp GAAAGTCACAAAGCTTTGCATCCTCCAGTCACAGCCTaGCCGAGATCCAATGGAGAGCACACAGATCTCCAC +
Preference number: 6 (lower is better)
Translates to: ESHKALHPPVTA*PRSNGEHTDLH
Trigger: GTGGAGATCTGTGTGCTCTCCATTGGATCTCGGCAAGGCTGTGACTGGAGGATGCAAAGCTTTGTGACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS TCA 72 bp TTGCAGGCTTCTACTAGTTCAGGAAATAAACCCACGTaGACGGCTTCCGGTTTCACAGGGATGCCATCCTCA +
Preference number: 6 (lower is better)
Translates to: LQASTSSGNKPT*TASGFTGMPSS
Trigger: TGAGGATGGCATCCCTGTGAAACCGGAAGCCGTTCACGTGGGTTTATTTCCTGAACTAGTAGAAGCCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466630.5
CDS GCA 72 bp AAAGTCACAAAGCTTTGCATCCTCCAGTCACAGCCTTaGCGAGATCCAATGGAGAGCACACAGATCTCCACA +
Preference number: 6 (lower is better)
Translates to: KVTKLCILQSQP*RDPMESTQIST
Trigger: TGTGGAGATCTGTGTGCTCTCCATTGGATCTCGGCAAGGCTGTGACTGGAGGATGCAAAGCTTTGTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS CAA 90 bp GAAGTCTTACTGCCATTTATGATCTGCCTTGAAAGTCACAAAGCTTaGCATCCTCCAGTCACAGCCTTGCCGAGATCCAATGGAGAGCAC +
Preference number: 6 (lower is better)
Translates to: EVLLPFMICLESHKA*HPPVTALPRSNGEH
Trigger: GTGCTCTCCATTGGATCTCGGCAAGGCTGTGACTGGAGGATGCAAAGCTTTGTGACTTTCAAGGCAGATCATAAATGGCAGTAAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411863.2
CDS GCA 72 bp CTCTCGATTCAGTCTTCCACTGGGATTACACCTCTCTaGAGTTCTTATGTTGTAATGTCGCCAAAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: LSIQSSTGITPL*SSYVVMSPKLC
Trigger: GCAGAGCTTTGGCGACATTACAACATAAGAACTGCAGAGAGGTGTAATCCCAGTGGAAGACTGAATCGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
CDS CCA 72 bp TCATTAAGTAGCAGTGCCCAAGAGTGTGCACTTACCTaGATGAGTATCCAGCAGGCTGTCTCTTTCTATCAC +
Preference number: 6 (lower is better)
Translates to: SLSSSAQECALT*MSIQQAVSFYH
Trigger: GTGATAGAAAGAGACAGCCTGCTGGATACTCATCCAGGTAAGTGCACACTCTTGGGCACTGCTACTTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466630.5
CDS TCA 72 bp AGCTCCAACTGCGCGATTACCTCTGGCTTACAAAGCTaGTACCCTATTCACAGGAGTAACATACATCTTAGG +
Preference number: 6 (lower is better)
Translates to: SSNCAITSGLQS*YPIHRSNIHLR
Trigger: CCTAAGATGTATGTTACTCCTGTGAATAGGGTATCAGCTTTGTAAGCCAGAGGTAATCGCGCAGTTGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466630.5
CDS TCA 72 bp CTTATATCCCAGAGGGAGATTTTTGGAACACTCCACTaGGTGGTTCAGAAGTGGCTGTTTTCCCTCATTAAG +
Preference number: 6 (lower is better)
Translates to: LISQREIFGTLH*VVQKWLFSLIK
Trigger: CTTAATGAGGGAAAACAGCCACTTCTGAACCACTCAGTGGAGTGTTCCAAAAATCTCCCTCTGGGATATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466630.5
CDS GCA 72 bp CTCTGCAGTTCTTATGTTGTAATGTCGCCAAAGCTCTaGTATCTTCTACATGAAAGTCAGCAGATGCACCAG +
Preference number: 6 (lower is better)
Translates to: LCSSYVVMSPKL*YLLHESQQMHQ
Trigger: CTGGTGCATCTGCTGACTTTCATGTAGAAGATAGCAGAGCTTTGGCGACATTACAACATAAGAACTGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411863.2
ENST00000429591.4
ENST00000466630.5
CDS CCA 72 bp AGGCTTAGTATTCCTTATATCCCAGAGGGAGATTTTTaGAACACTCCACTGAGTGGTTCAGAAGTGGCTGTT +
Preference number: 6 (lower is better)
Translates to: RLSIPYIPEGDF*NTPLSGSEVAV
Trigger: AACAGCCACTTCTGAACCACTCAGTGGAGTGTTCCAAAAATCTCCCTCTGGGATATAAGGAATACTAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466630.5
CDS GCA 72 bp CTTCTATCCCAGCCCAAACTATATTCACAAAAACTTTaGAGGCTTCTACTAGTTCAGGAAATAAACCCACGT +
Preference number: 6 (lower is better)
Translates to: LLSQPKLYSQKL*RLLLVQEINPR
Trigger: ACGTGGGTTTATTTCCTGAACTAGTAGAAGCCTGCAAAGTTTTTGTGAATATAGTTTGGGCTGGGATAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466630.5
CDS CAA 72 bp TACCCTATTCACAGGAGTAACATACATCTTAGGAGTTaGTACTGGGAACAAAATTCTCAGACACACTCCCAA +
Preference number: 6 (lower is better)
Translates to: YPIHRSNIHLRS*YWEQNSQTHSQ
Trigger: TTGGGAGTGTGTCTGAGAATTTTGTTCCCAGTACAAACTCCTAAGATGTATGTTACTCCTGTGAATAGGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466630.5
CDS CCA 72 bp ACAATCCTAACTGGCTTTGTAGCCACTGGATTTGACTaGAAGGAAATTAGTGGTAATCTCCAAGAAAACAAT +
Preference number: 6 (lower is better)
Translates to: TILTGFVATGFD*KEISGNLQENN
Trigger: ATTGTTTTCTTGGAGATTACCACTAATTTCCTTCCAGTCAAATCCAGTGGCTACAAAGCCAGTTAGGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466630.5
ENST00000482436.1
CDS CCA 72 bp TCACAAAGGAGAGCAAGAGAATTAGAAATTAGGCTGTaGGTTGTATACAAGTGTCAAGAGTTTGATGATAAA +
Preference number: 6 (lower is better)
Translates to: SQRRARELEIRL*VVYKCQEFDDK
Trigger: TTTATCATCAAACTCTTGACACTTGTATACAACCCACAGCCTAATTTCTAATTCTCTTGCTCTCCTTTGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466630.5