RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF71 (Homo sapiens)

Ensembl gene IDs: ENSG00000197951

Ensembl transcript IDs: ENST00000328070.10, ENST00000594944.1, ENST00000599599.7

Found 364 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGTGGGTGCTGGGCCAGGAAGGGAGAGGCCCCTGCGGTGGGAGTaGGCTGGGCCAGCGCTGGGACTGAACGAAAGCACAGTGTGGCTG +
Preference number: 1 (lower is better)
Translates to: SVGAGPGRERPLRWE*AGPALGLNESTVWL
Trigger: CAGCCACACTGTGCTTTCGTTCAGTCCCAGCGCTGGCCCAGCCCACTCCCACCGCAGGGGCCTCTCCCTTCCTGGCCCAGCACCCACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR CCA 90 bp AGGGGAGAACTTCTCACAGCACTGCTGACAAAGCGCGCAGCCATCTaGCGTCCGTCCTGGGCACCGCCAGTGAGAGCCCTGCACAGAGGC +
Preference number: 1 (lower is better)
Translates to: RGELLTALLTKRAAI*RPSWAPPVRALHRG
Trigger: GCCTCTGTGCAGGGCTCTCACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGCTGTGAGAAGTTCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR CCA 90 bp TGTGGCCATTATTCCAGCCACCTCAGGGTTCCTCTTGGGGAAACGTaGAGCCCTGAGTGGGGAGCTTGCCCAGGAGGCGGGAGACCAGGG +
Preference number: 1 (lower is better)
Translates to: CGHYSSHLRVPLGET*SPEWGACPGGGRPG
Trigger: CCCTGGTCTCCCGCCTCCTGGGCAAGCTCCCCACTCAGGGCTCCACGTTTCCCCAAGAGGAACCCTGAGGTGGCTGGAATAATGGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR CCA 90 bp ACAGTGTGGCTGAAGCAGAGTGAGCAGGGGGAGCGGGACGGGAGCTaGGAGAGGCTGCGTCACACAGGGGTTTGTGAGGAGTTTGGCATT +
Preference number: 1 (lower is better)
Translates to: TVWLKQSEQGERDGS*ERLRHTGVCEEFGI
Trigger: AATGCCAAACTCCTCACAAACCCCTGTGTGACGCAGCCTCTCCCAGCTCCCGTCCCGCTCCCCCTGCTCACTCTGCTTCAGCCACACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR GCA 90 bp GGATGGGAGAGGGGGATGGTGGTGGTGCAGCCTCGATCCCATCTCTaGTTCACACACTGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAA +
Preference number: 1 (lower is better)
Translates to: GWERGMVVVQPRSHL*FTHWGVQETKARSQ
Trigger: TTGACTCCTGGCCTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAGATGGGATCGAGGCTGCACCACCACCATCCCCCTCTCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR CCA 90 bp TTTTCCCCTCACAAACAACCGGCAAACTCCTGCCACTTCCTAGCTTaGTGGCTGCCAGCGTGCACTGCAGGGAAACGGTGGGTGGAGGGA +
Preference number: 1 (lower is better)
Translates to: FSPHKQPANSCHFLA*WLPACTAGKRWVEG
Trigger: TCCCTCCACCCACCGTTTCCCTGCAGTGCACGCTGGCAGCCACCAAGCTAGGAAGTGGCAGGAGTTTGCCGGTTGTTTGTGAGGGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR GCA 90 bp GGTGGACCCCAGCTCACACCCTGTCCCCTCCACTTCCATGTTGTGTaGCCTCAGGAAGCTTACCTTGCCTCACTGAACCTCAGATTCCTT +
Preference number: 1 (lower is better)
Translates to: GGPQLTPCPLHFHVV*PQEAYLASLNLRFL
Trigger: AAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACACAACATGGAAGTGGAGGGGACAGGGTGTGAGCTGGGGTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR CCA 90 bp GGGATGGTGGTGGTGCAGCCTCGATCCCATCTCTGCTTCACACACTaGGGAGTCCAGGAAACCAAGGCCAGGAGTCAAGTCCTGAGAAAT +
Preference number: 1 (lower is better)
Translates to: GMVVVQPRSHLCFTH*GVQETKARSQVLRN
Trigger: ATTTCTCAGGACTTGACTCCTGGCCTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAGATGGGATCGAGGCTGCACCACCACCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR TCA 90 bp CCTGATGTCTGTTACCAGCGGCCATGGCTCAGCTACAGTGAACCTTaGAGTGTCCCCAGATACGTCAGACACCGAGGGGCTTGCTTTCTG +
Preference number: 1 (lower is better)
Translates to: PDVCYQRPWLSYSEP*SVPRYVRHRGACFL
Trigger: CAGAAAGCAAGCCCCTCGGTGTCTGACGTATCTGGGGACACTTCAAGGTTCACTGTAGCTGAGCCATGGCCGCTGGTAACAGACATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR TCA 90 bp CAGCTCCACTTTCCCGCTGAAGAAACAGAGATGTGGAGGCAGGCGTaGCCTGTCCCAGCTCTAGGACAGTTACTCAAGAGGGCTAGTCTG +
Preference number: 1 (lower is better)
Translates to: QLHFPAEETEMWRQA*PVPALGQLLKRASL
Trigger: CAGACTAGCCCTCTTGAGTAACTGTCCTAGAGCTGGGACAGGTCACGCCTGCCTCCACATCTCTGTTTCTTCAGCGGGAAAGTGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR GCA 90 bp TTCCCACAACAGATGCAACTAAAGCAATGTCTGATCAAGACTCGCTaGTGGAAACCACCACAATCCCACGTGGGAAGCCAGCCTGAGGAT +
Preference number: 1 (lower is better)
Translates to: FPQQMQLKQCLIKTR*WKPPQSHVGSQPED
Trigger: ATCCTCAGGCTGGCTTCCCACGTGGGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCATCTGTTGTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR CCA 90 bp CCACAACAGATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTaGAAACCACCACAATCCCACGTGGGAAGCCAGCCTGAGGATGAT +
Preference number: 1 (lower is better)
Translates to: PQQMQLKQCLIKTRC*KPPQSHVGSQPEDD
Trigger: ATCATCCTCAGGCTGGCTTCCCACGTGGGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCATCTGTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR TCA 90 bp AGCCTGAATCAAACCCACCCTGAGGCCCACTTGACTGCCAGAATTTaGAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTT +
Preference number: 1 (lower is better)
Translates to: SLNQTHPEAHLTARI*KTVHLVYTCPSGCF
Trigger: AAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATTCTGGCAGTCAAGTGGGCCTCAGGGTGGGTTTGATTCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR TCA 90 bp TCCACTTCCATGTTGTGTGCCCTCAGGAAGCTTACCTTGCCTCACTaGACCTCAGATTCCTTATCTATACGACATGCACATGAATCCCTA +
Preference number: 1 (lower is better)
Translates to: STSMLCALRKLTLPH*TSDSLSIRHAHESL
Trigger: TAGGGATTCATGTGCATGTCGTATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACACAACATGGAAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR CCA 90 bp CAGTCGGCCTTAGGAAACTCACTCGAAGTTACTGATATGGTCTGTTaGTGCTTCCCTGTATTCACATATTGGAAACTTGATCCCCAATGT +
Preference number: 1 (lower is better)
Translates to: QSALGNSLEVTDMVC*CFPVFTYWKLDPQC
Trigger: ACATTGGGGATCAAGTTTCCAATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGTTTCCTAAGGCCGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR TCA 90 bp GTAAACAGAGCTTCAGTCGGCCTTAGGAAACTCACTCGAAGTTACTaGTATGGTCTGTTGGTGCTTCCCTGTATTCACATATTGGAAACT +
Preference number: 1 (lower is better)
Translates to: VNRASVGLRKLTRSY*YGLLVLPCIHILET
Trigger: AGTTTCCAATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGTTTCCTAAGGCCGACTGAAGCTCTGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR GCA 90 bp TCGGCCTTAGGAAACTCACTCGAAGTTACTGATATGGTCTGTTGGTaGTTCCCTGTATTCACATATTGGAAACTTGATCCCCAATGTAAC +
Preference number: 1 (lower is better)
Translates to: SALGNSLEVTDMVCW*FPVFTYWKLDPQCN
Trigger: GTTACATTGGGGATCAAGTTTCCAATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGTTTCCTAAGGCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR CCA 90 bp GAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTaGAAACTTGATCCCCAATGTAACAGTATGAAGAGGGAGGACCTT +
Preference number: 1 (lower is better)
Translates to: EVTDMVCWCFPVFTY*KLDPQCNSMKREDL
Trigger: AAGGTCCTCCCTCTTCATACTGTTACATTGGGGATCAAGTTTCCAATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp GACCTCGGAGCCCAGGTGGACCCCAGCTCACACCCTGTCCCCTCCACTTCCATGTGGTGGCTGCCAGCGTaGACTGCAGGGAAACGGTGG +
Preference number: 2 (lower is better)
Translates to: DLGAQVDPSSHPVPSTSMWWLPA*TAGKRW
Trigger: CCACCGTTTCCCTGCAGTGCACGCTGGCAGCCACCA...CATGGAAGTGGAGGGGACAGGGTGTGAGCTGGGGTCCACCTGGGCTCCGAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR GCA 90 bp CTGAAGCAGAGTGAGCAGGGGGAGCGGGACGGGAGCTGGGAGAGGCTGCGTCACGGGGGATGGTGGTGGTaGAGCCTCGATCCCATCTCT +
Preference number: 2 (lower is better)
Translates to: LKQSEQGERDGSWERLRHGGWWW*SLDPIS
Trigger: AGAGATGGGATCGAGGCTGCACCACCACCATCCCCC...GTGACGCAGCCTCTCCCAGCTCCCGTCCCGCTCCCCCTGCTCACTCTGCTTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp CTGAAGCAGAGTGAGCAGGGGGAGCGGGACGGGAGCTGGGAGAGGCTGCGTCACGGCTGGTTCTCTGGATaGGAGAGGGGGATGGTGGTG +
Preference number: 2 (lower is better)
Translates to: LKQSEQGERDGSWERLRHGWFSG*ERGMVV
Trigger: CACCACCATCCCCCTCTCCCATCCAGAGAACCAGCC...GTGACGCAGCCTCTCCCAGCTCCCGTCCCGCTCCCCCTGCTCACTCTGCTTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR TCA 90 bp AGGAGGGACCTGAGAGGTGGCCCGGCTGGTTCTCTGGATGGGAGAGGGGGATGGAGGTCAGGGCCCTTGTaGCTGGGATTAGCACCCTTA +
Preference number: 2 (lower is better)
Translates to: RRDLRGGPAGSLDGRGGWRSGPL*LGLAPL
Trigger: TAAGGGTGCTAATCCCAGTCACAAGGGCCCTGACCT...CCATCCCCCTCTCCCATCCAGAGAACCAGCCGGGCCACCTCTCAGGTCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp GTAGTCCAGTGTAGGCAAGGAGCACGGACCTCGGAGCCCAGGTGGACCCCAGCTTGCCACTTCCTAGCTTaGTGGCTGCCAGCGTGCACT +
Preference number: 2 (lower is better)
Translates to: VVQCRQGARTSEPRWTPACHFLA*WLPACT
Trigger: AGTGCACGCTGGCAGCCACCAAGCTAGGAAGTGGCA...AGCTGGGGTCCACCTGGGCTCCGAGGTCCGTGCTCCTTGCCTACACTGGACTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp AGGAGGGACCTGAGAGGTGGCCCGGCTGGTTCTCTGGATGGGAGAGGGGGATGGAAGAGGGAGGACCTTTaGGAGGTCATGAGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: RRDLRGGPAGSLDGRGGWKREDL*EVMRSG
Trigger: CCCTGACCTCATGACCTCCCAAAGGTCCTCCCTCTT...CCATCCCCCTCTCCCATCCAGAGAACCAGCCGGGCCACCTCTCAGGTCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR TCA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGCCTGGGCACCGCCAGTaGGAGCCCTGCACAGAGGCG +
Preference number: 2 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQPGHRQ*EPCTEA
Trigger: CGCCTCTGTGCAGGGCTCTCACTGGCGGTGCCCAGG...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CCA 90 bp TCCCATCTCTGCTTCACACACTGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAAACCTCGGAGCCCAGGTaGACCCCAGCTCACACCCTG +
Preference number: 2 (lower is better)
Translates to: SHLCFTHWGVQETKARSQTSEPR*TPAHTL
Trigger: CAGGGTGTGAGCTGGGGTCCACCTGGGCTCCGAGGT...TTGACTCCTGGCCTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAGATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGATCTGGCGTCCGTCCTaGGCACCGCCAGTGAGAGCC +
Preference number: 2 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQIWRPS*APPVRA
Trigger: GGCTCTCACTGGCGGTGCCCAGGACGGACGCCAGAT...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAAAGCGCGCAGCCATCTaGCGTCCGTCCTGGGCACCG +
Preference number: 2 (lower is better)
Translates to: LLAPPTITEADFDQTTGQKRAAI*RPSWAP
Trigger: CGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTT...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGGCTGCCAGCGTGCACTaGAGGGAAACGGTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQAASVH*RETVGG
Trigger: TCCACCCACCGTTTCCCTGCAGTGCACGCTGGCAGC...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp AGGAGGGACCTGAGAGGTGGCCCGGCTGGTTCTCTGGATGGGAGAGGGGGATGGATCAGACACCAAATCTaGCAGAGCCTTGATCTTGGA +
Preference number: 2 (lower is better)
Translates to: RRDLRGGPAGSLDGRGGWIRHQI*QSLDLG
Trigger: TCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGAT...CCATCCCCCTCTCCCATCCAGAGAACCAGCCGGGCCACCTCTCAGGTCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAAAGCGCGCAGCCATCTaGCGTCCGTCCTGGGCACCG +
Preference number: 2 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRKRAAI*RPSWAP
Trigger: CGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTT...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp GCATTTACTCCAAGTGATAAAGGGGTCATTCAGACCCCACCCAGCACCCATGACAGGAGGGGGCATGTGTaGTCAGCCAGCCCCTCCACA +
Preference number: 2 (lower is better)
Translates to: AFTPSDKGVIQTPPSTHDRRGHV*SASPST
Trigger: TGTGGAGGGGCTGGCTGATCACACATGCCCCCTCCT...GTCATGGGTGCTGGGTGGGGTCTGAATGACCCCTTTATCACTTGGAGTAAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR TCA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGGAGGGGCTTGCTTTCTaGGGCTCAGTAAGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQEGLAF*GSVRRG
Trigger: CCCCCTCCTTACTGAGCCTCAGAAAGCAAGCCCCTC...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp CTGAAGCAGAGTGAGCAGGGGGAGCGGGACGGGAGCTGGGAGAGGCTGCGTCACCAGCATCCAGAACCATaGGTGACAAATTTCTATTGT +
Preference number: 2 (lower is better)
Translates to: LKQSEQGERDGSWERLRHQHPEP*VTNFYC
Trigger: ACAATAGAAATTTGTCACTCATGGTTCTGGATGCTG...GTGACGCAGCCTCTCCCAGCTCCCGTCCCGCTCCCCCTGCTCACTCTGCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAATCTGGCGTCCGTCCTaGGCACCGCCAGTGAGAGCC +
Preference number: 2 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRIWRPS*APPVRA
Trigger: GGCTCTCACTGGCGGTGCCCAGGACGGACGCCAGAT...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CCA 90 bp GTAGTCCAGTGTAGGCAAGGAGCACGGACCTCGGAGCCCAGGTGGACCCCAGCTGGAGTGTGGAACAACTaGAAATGCCAGAACATTAGC +
Preference number: 2 (lower is better)
Translates to: VVQCRQGARTSEPRWTPAGVWNN*KCQNIS
Trigger: GCTAATGTTCTGGCATTTCCAGTTGTTCCACACTCC...AGCTGGGGTCCACCTGGGCTCCGAGGTCCGTGCTCCTTGCCTACACTGGACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp GCATTTACTCCAAGTGATAAAGGGGTCATTCAGACCCCACCCAGCACCCATGACGCCCGGCTGGTTCTCTaGATGGGAGAGGGGGATGGT +
Preference number: 2 (lower is better)
Translates to: AFTPSDKGVIQTPPSTHDARLVL*MGEGDG
Trigger: ACCATCCCCCTCTCCCATCCAGAGAACCAGCCGGGC...GTCATGGGTGCTGGGTGGGGTCTGAATGACCCCTTTATCACTTGGAGTAAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR TCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGAATGTGGAGGCAGGCGTaGCCTGTCCCAGCTCTAGGA +
Preference number: 2 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARMWRQA*PVPALG
Trigger: TCCTAGAGCTGGGACAGGTCACGCCTGCCTCCACAT...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR CAA 90 bp AGCTTCTGGAGTCAGAATGGGTTTGAATCCAGCAGCTGTGTGACCTaGGGCAGGTGCCTGAACCTCTGCGAGCCTGTTTCCCCATCTGTA +
Preference number: 2 (lower is better)
Translates to: SFWSQNGFESSSCVT*GRCLNLCEPVSPSV
Trigger: TACAGATGGGGAAACAGGCTCGCAGAGGTTCAGGCACCTGCCCAAGGTCACACAGCTGCTGGATTCAAACCCATTCTGACTCCAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp TCCCATCTCTGCTTCACACACTGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAATGTTACCAGCGGCCATaGCTCAGCTACAGTGAACCT +
Preference number: 2 (lower is better)
Translates to: SHLCFTHWGVQETKARSQCYQRP*LSYSEP
Trigger: AGGTTCACTGTAGCTGAGCCATGGCCGCTGGTAACA...TTGACTCCTGGCCTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAGATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp CTGACATGGGTGACATCCACATCTATAAAGTGTCTTCTCAGCACCACCGGGACTCAGGGAAACGGTGGGTaGAGGGATAGGAAGGCCCTC +
Preference number: 2 (lower is better)
Translates to: LTWVTSTSIKCLLSTTGTQGNGG*RDRKAL
Trigger: GAGGGCCTTCCTATCCCTCCACCCACCGTTTCCCTG...AGTCCCGGTGGTGCTGAGAAGACACTTTATAGATGTGGATGTCACCCATGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAACACTTCCTAGCTTGGTaGCTGCCAGCGTGCACTGCA +
Preference number: 2 (lower is better)
Translates to: LLAPPTITEADFDQTTGQHFLAW*LPACTA
Trigger: TGCAGTGCACGCTGGCAGCCACCAAGCTAGGAAGTG...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAATGCCACTTCCTAGCTTaGTGGCTGCCAGCGTGCACT +
Preference number: 2 (lower is better)
Translates to: LLAPPTITEADFDQTTGQCHFLA*WLPACT
Trigger: AGTGCACGCTGGCAGCCACCAAGCTAGGAAGTGGCA...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTACCTGGGCACCGCCAGTaGGAGCCCTGCACAGAGGCG +
Preference number: 2 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLPGHRQ*EPCTEA
Trigger: CGCCTCTGTGCAGGGCTCTCACTGGCGGTGCCCAGG...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCAGGAGGGGGCATGTGTaGTCAGCCAGCCCCTCCACA +
Preference number: 2 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSRRGHV*SASPST
Trigger: TGTGGAGGGGCTGGCTGATCACACATGCCCCCTCCT...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACATGTGGAGGCAGGCGTaGCCTGTCCCAGCTCTAGGA +
Preference number: 2 (lower is better)
Translates to: ITENHSYGSNDESLNQTHMWRQA*PVPALG
Trigger: TCCTAGAGCTGGGACAGGTCACGCCTGCCTCCACAT...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACCAGGGAAACGGTGGGTaGAGGGATAGGAAGGCCCTC +
Preference number: 2 (lower is better)
Translates to: ITENHSYGSNDESLNQTHQGNGG*RDRKAL
Trigger: GAGGGCCTTCCTATCCCTCCACCCACCGTTTCCCTG...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGACAACCGGCAAACTCCTaGCACTTCCTAGCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRQPANS*HFLAWW
Trigger: CCACCAAGCTAGGAAGTGGCAGGAGTTTGCCGGTTG...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp TCCCATCTCTGCTTCACACACTGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAACACTTCCATGTTGTGTaGCCTCAGGAAGCTTACCTT +
Preference number: 2 (lower is better)
Translates to: SHLCFTHWGVQETKARSQHFHVV*PQEAYL
Trigger: AAGGTAAGCTTCCTGAGGGCACACAACATGGAAGTG...TTGACTCCTGGCCTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAGATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp TGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAAGTCCTGAGAAATTCAATATGTCACTTCCTAGCTTGGTaGCTGCCAGCGTGCACTGCA +
Preference number: 2 (lower is better)
Translates to: WGVQETKARSQVLRNSICHFLAW*LPACTA
Trigger: TGCAGTGCACGCTGGCAGCCACCAAGCTAGGAAGTG...ACATATTGAATTTCTCAGGACTTGACTCCTGGCCTTGGTTTCCTGGACTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR TCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAAGCTACAGTGAACCTTaGAGTGTCCCCAGATACGTC +
Preference number: 2 (lower is better)
Translates to: LLAPPTITEADFDQTTGQSYSEP*SVPRYV
Trigger: GACGTATCTGGGGACACTTCAAGGTTCACTGTAGCT...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATATGGCTCAGCTACAGTaGACCTTGAAGTGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: THGENADGDKLHLDSRMYMAQLQ*TLKCPQ
Trigger: CTGGGGACACTTCAAGGTTCACTGTAGCTGAGCCAT...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCGCTAGTCTGGAACCCTaGTGTCTGTTACCAGCGGCC +
Preference number: 2 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSASLEP*CLLPAA
Trigger: GGCCGCTGGTAACAGACATCAGGGTTCCAGACTAGC...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp GCATTTACTCCAAGTGATAAAGGGGTCATTCAGACCCCACCCAGCACCCATGACAATCTGCCAGAGCCTTaGTCTTGGACTTCCCAGCAT +
Preference number: 2 (lower is better)
Translates to: AFTPSDKGVIQTPPSTHDNLPEP*SWTSQH
Trigger: ATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATT...GTCATGGGTGCTGGGTGGGGTCTGAATGACCCCTTTATCACTTGGAGTAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR TCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCGAATCAAACCCACCCTaGGGCCCACTTGACTGCCAG +
Preference number: 2 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSESNPP*GPLDCQ
Trigger: CTGGCAGTCAAGTGGGCCTCAGGGTGGGTTTGATTC...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAAGACACCGAGGGGCTTaGTTTCTGAGGCTCAGTAAG +
Preference number: 2 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRRHRGA*FLRLSK
Trigger: CTTACTGAGCCTCAGAAAGCAAGCCCCTCGGTGTCT...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAACAGATGGTGACAAGCTaGATCTGGACTCCAGGATGT +
Preference number: 2 (lower is better)
Translates to: LLAPPTITEADFDQTTGQQMVTS*IWTPGC
Trigger: ACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTG...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGAAGGCCCCAGAGAAAGTaGACTTTGGGGAACACTCTT +
Preference number: 2 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARRPQRK*TLGNTL
Trigger: AAGAGTGTTCCCCAAAGTGCACTTTCTCTGGGGCCT...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACAAGAGGGAGGACCTTTaGGAGGTCATGAGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: ITENHSYGSNDESLNQTHKREDL*EVMRSG
Trigger: CCCTGACCTCATGACCTCCCAAAGGTCCTCCCTCTT...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CCA 90 bp CTGACATGGGTGACATCCACATCTATAAAGTGTCTTCTCAGCACCACCGGGACTCTCTGCTTCACACACTaGGGAGTCCAGGAAACCAAG +
Preference number: 2 (lower is better)
Translates to: LTWVTSTSIKCLLSTTGTLCFTH*GVQETK
Trigger: CTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAG...AGTCCCGGTGGTGCTGAGAAGACACTTTATAGATGTGGATGTCACCCATGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp ACTCCGTCAATGTGGCCATTATTCCAGCCACCTCAGGGTTCCTCTTGGGGAAACCCCTCCACATCAGCTTaGGTTGCAGAGAAAAGAAAC +
Preference number: 2 (lower is better)
Translates to: TPSMWPLFQPPQGSSWGNPSTSA*VAEKRN
Trigger: GTTTCTTTTCTCTGCAACCCAAGCTGATGTGGAGGG...GTTTCCCCAAGAGGAACCCTGAGGTGGCTGGAATAATGGCCACATTGACGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp GGACAGATGTATGGGATAGAAGACTTGTTAAAAAGCAGGTTCCTGACCTGCTTGCCTCTTGGGGAAACGTaGAGCCCTGAGTGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: GQMYGIEDLLKSRFLTCLPLGET*SPEWGA
Trigger: AGCTCCCCACTCAGGGCTCCACGTTTCCCCAAGAGG...CAAGCAGGTCAGGAACCTGCTTTTTAACAAGTCTTCTATCCCATACATCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR TCA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCGCTAGTCTGGAACCCTaGTGTCTGTTACCAGCGGCC +
Preference number: 2 (lower is better)
Translates to: STLFIRARVAVFLICRMCASLEP*CLLPAA
Trigger: GGCCGCTGGTAACAGACATCAGGGTTCCAGACTAGC...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp TCCCATCTCTGCTTCACACACTGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAATTGACTGCCAGAATTTaGAAAACGGTCCACCTTGTT +
Preference number: 2 (lower is better)
Translates to: SHLCFTHWGVQETKARSQLTARI*KTVHLV
Trigger: AACAAGGTGGACCGTTTTTCAAATTCTGGCAGTCAA...TTGACTCCTGGCCTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR GCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGACAGATGGTGACAAGCTaGATCTGGACTCCAGGATGT +
Preference number: 2 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRQMVTS*IWTPGC
Trigger: ACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTG...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTAGCTGCCAGCGTGCACTaGAGGGAAACGGTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLAASVH*RETVGG
Trigger: TCCACCCACCGTTTCCCTGCAGTGCACGCTGGCAGC...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATGGTGGCTGCCAGCGTaGACTGCAGGGAAACGGTGG +
Preference number: 2 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLWWLPA*TAGKRW
Trigger: CCACCGTTTCCCTGCAGTGCACGCTGGCAGCCACCA...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CCA 90 bp CTGACATGGGTGACATCCACATCTATAAAGTGTCTTCTCAGCACCACCGGGACTAACGAAAGCACAGTGTaGCTGAAGCAGAGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: LTWVTSTSIKCLLSTTGTNESTV*LKQSEQ
Trigger: CTGCTCACTCTGCTTCAGCCACACTGTGCTTTCGTT...AGTCCCGGTGGTGCTGAGAAGACACTTTATAGATGTGGATGTCACCCATGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR TCA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTGAGGGGCTTGCTTTCTaGGGCTCAGTAAGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: THSKLLIWSVGASLYSHIEGLAF*GSVRRG
Trigger: CCCCCTCCTTACTGAGCCTCAGAAAGCAAGCCCCTC...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCATGGCTCAGCTACAGTaGACCTTGAAGTGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSMAQLQ*TLKCPQ
Trigger: CTGGGGACACTTCAAGGTTCACTGTAGCTGAGCCAT...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAACTCCAGGATGTATCTaGCAAAGAGGGAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRTPGCI*QRGRCL
Trigger: GAGACATCTCCCTCTTTGTCAGATACATCCTGGAGT...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCCCAATGATGAGAGCCTaGATCAAACCCACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSPMMRA*IKPTLR
Trigger: CCTCAGGGTGGGTTTGATTCAGGCTCTCATCATTGG...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACTCAAGAGGGCTAGTCTaGAACCCTGATGTCTGTTAC +
Preference number: 2 (lower is better)
Translates to: ITENHSYGSNDESLNQTHSRGLV*NPDVCY
Trigger: GTAACAGACATCAGGGTTCCAGACTAGCCCTCTTGA...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTCTCACAGCACTGCTaGCAAAGCGCGCAGCCATCT +
Preference number: 2 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLFSQHC*QSAQPS
Trigger: AGATGGCTGCGCGCTTTGTCAGCAGTGCTGTGAGAA...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTAGGTCAGGGCCCTTGTaGCTGGGATTAGCACCCTTA +
Preference number: 2 (lower is better)
Translates to: THSKLLIWSVGASLYSHIRSGPL*LGLAPL
Trigger: TAAGGGTGCTAATCCCAGTCACAAGGGCCCTGACCT...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CCA 90 bp GCATTTACTCCAAGTGATAAAGGGGTCATTCAGACCCCACCCAGCACCCATGACAGAGAAAGTGCACTTTaGGGAACACTCTTATGTGTA +
Preference number: 2 (lower is better)
Translates to: AFTPSDKGVIQTPPSTHDRESAL*GTLLCV
Trigger: TACACATAAGAGTGTTCCCCAAAGTGCACTTTCTCT...GTCATGGGTGCTGGGTGGGGTCTGAATGACCCCTTTATCACTTGGAGTAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACGGAGTGTGGAACAACTaGAAATGCCAGAACATTAGC +
Preference number: 2 (lower is better)
Translates to: ITENHSYGSNDESLNQTHGVWNN*KCQNIS
Trigger: GCTAATGTTCTGGCATTTCCAGTTGTTCCACACTCC...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR CAA 90 bp ACCTATGAAGAACATACCCCATCAGACACCAAATCTGCCAGAGCCTaGATCTTGGACTTCCCAGCATCCAGAACCATGAGTGACAAATTT +
Preference number: 2 (lower is better)
Translates to: TYEEHTPSDTKSARA*ILDFPASRTMSDKF
Trigger: AAATTTGTCACTCATGGTTCTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGGGTATGTTCTTCATAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp TGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAAGTCCTGAGAAATTCAATATGTCTTGTGAGGGTTAAATaGGCCATTTCATCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: WGVQETKARSQVLRNSICLVRVK*AISSLQ
Trigger: TTGGAGAGATGAAATGGCTCATTTAACCCTCACAAG...ACATATTGAATTTCTCAGGACTTGACTCCTGGCCTTGGTTTCCTGGACTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CCA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCTCAAGAGGGCTAGTCTaGAACCCTGATGTCTGTTAC +
Preference number: 2 (lower is better)
Translates to: STLFIRARVAVFLICRMCSRGLV*NPDVCY
Trigger: GTAACAGACATCAGGGTTCCAGACTAGCCCTCTTGA...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTAAGCTACAGTGAACCTTaGAGTGTCCCCAGATACGTC +
Preference number: 2 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLSYSEP*SVPRYV
Trigger: GACGTATCTGGGGACACTTCAAGGTTCACTGTAGCT...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACCAGCATCCAGAACCATaGGTGACAAATTTCTATTGT +
Preference number: 2 (lower is better)
Translates to: ITENHSYGSNDESLNQTHQHPEP*VTNFYC
Trigger: ACAATAGAAATTTGTCACTCATGGTTCTGGATGCTG...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGAGCTGTTTTTCTTATTTaGAGAATGTGCTTGCTGATA +
Preference number: 2 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARAVFLI*RMCLLI
Trigger: TATCAGCAAGCACATTCTGCAAATAAGAAAAACAGC...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR TCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTAACTCCAGGATGTATCTaGCAAAGAGGGAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLTPGCI*QRGRCL
Trigger: GAGACATCTCCCTCTTTGTCAGATACATCCTGGAGT...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp GGACAGATGTATGGGATAGAAGACTTGTTAAAAAGCAGGTTCCTGACCTGCTTGTGGAACAACTGGAAATaGCAGAACATTAGCAACCAG +
Preference number: 2 (lower is better)
Translates to: GQMYGIEDLLKSRFLTCLWNNWK*QNISNQ
Trigger: CTGGTTGCTAATGTTCTGGCATTTCCAGTTGTTCCA...CAAGCAGGTCAGGAACCTGCTTTTTAACAAGTCTTCTATCCCATACATCTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR TCA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTCACAAGCACTACCTATaGAGAACATACCCCATCAGA +
Preference number: 2 (lower is better)
Translates to: THSKLLIWSVGASLYSHIHKHYL*RTYPIR
Trigger: TCTGATGGGGTATGTTCTTCATAGGTAGTGCTTGTG...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTAATCAGACACCAAATCTaGCAGAGCCTTGATCTTGGA +
Preference number: 2 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLIRHQI*QSLDLG
Trigger: TCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGAT...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR GCA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCTCTGAATATCAAACCTaGTGCTGTTTCTTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: STLFIRARVAVFLICRMCSEYQT*CCFFSF
Trigger: GAAGGAAAAGAAACAGCAGCAGGTTTGATATTCAGA...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CAA 90 bp CTGAAGCAGAGTGAGCAGGGGGAGCGGGACGGGAGCTGGGAGAGGCTGCGTCACCTGCCACTTCCTAGCTaGGTGGCTGCCAGCGTGCAC +
Preference number: 3 (lower is better)
Translates to: LKQSEQGERDGSWERLRHLPLPS*VAASVH
Trigger: GTGCACGCTGGCAGCCACCAAGCTAGGAAGTGGCAG...GTGACGCAGCCTCTCCCAGCTCCCGTCCCGCTCCCCCTGCTCACTCTGCTTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR CCA 72 bp GGTGGCTGCCAGCGTGCACTGCAGGGAAACGGTGGGTaGAGGGATAGGAAGGCCCTCACGCTCCCAACCCAC +
Preference number: 3 (lower is better)
Translates to: GGCQRALQGNGG*RDRKALTLPTH
Trigger: GTGGGTTGGGAGCGTGAGGGCCTTCCTATCCCTCCACCCACCGTTTCCCTGCAGTGCACGCTGGCAGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR CCA 72 bp CTTCTCACAGCACTGCTGACAAAGCGCGCAGCCATCTaGCGTCCGTCCTGGGCACCGCCAGTGAGAGCCCTG +
Preference number: 3 (lower is better)
Translates to: LLTALLTKRAAI*RPSWAPPVRAL
Trigger: CAGGGCTCTCACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGCTGTGAGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR CCA 72 bp CTCAGGGTTCCTCTTGGGGAAACGTGGAGCCCTGAGTaGGGAGCTTGCCCAGGAGGCGGGAGACCAGGGATG +
Preference number: 3 (lower is better)
Translates to: LRVPLGETWSPE*GACPGGGRPGM
Trigger: CATCCCTGGTCTCCCGCCTCCTGGGCAAGCTCCCCACTCAGGGCTCCACGTTTCCCCAAGAGGAACCCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR CCA 72 bp CTGAAGCAGAGTGAGCAGGGGGAGCGGGACGGGAGCTaGGAGAGGCTGCGTCACACAGGGGTTTGTGAGGAG +
Preference number: 3 (lower is better)
Translates to: LKQSEQGERDGS*ERLRHTGVCEE
Trigger: CTCCTCACAAACCCCTGTGTGACGCAGCCTCTCCCAGCTCCCGTCCCGCTCCCCCTGCTCACTCTGCTTCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CAA 90 bp GTAGTCCAGTGTAGGCAAGGAGCACGGACCTCGGAGCCCAGGTGGACCCCAGCTGAAGAGGGAGGACCTTaGGGAGGTCATGAGGTCAGG +
Preference number: 3 (lower is better)
Translates to: VVQCRQGARTSEPRWTPAEEGGP*GGHEVR
Trigger: CCTGACCTCATGACCTCCCAAAGGTCCTCCCTCTTC...AGCTGGGGTCCACCTGGGCTCCGAGGTCCGTGCTCCTTGCCTACACTGGACTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR GCA 72 bp AGGGGGATGGTGGTGGTGCAGCCTCGATCCCATCTCTaGTTCACACACTGGGGAGTCCAGGAAACCAAGGCC +
Preference number: 3 (lower is better)
Translates to: RGMVVVQPRSHL*FTHWGVQETKA
Trigger: GGCCTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAGATGGGATCGAGGCTGCACCACCACCATCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR CCA 72 bp CACAAACAACCGGCAAACTCCTGCCACTTCCTAGCTTaGTGGCTGCCAGCGTGCACTGCAGGGAAACGGTGG +
Preference number: 3 (lower is better)
Translates to: HKQPANSCHFLA*WLPACTAGKRW
Trigger: CCACCGTTTCCCTGCAGTGCACGCTGGCAGCCACCAAGCTAGGAAGTGGCAGGAGTTTGCCGGTTGTTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR CCA 72 bp GGTTGCAGAGAAAAGAAACAGGAGGGACCTGAGAGGTaGCCCGGCTGGTTCTCTGGATGGGAGAGGGGGATG +
Preference number: 3 (lower is better)
Translates to: GCREKKQEGPER*PGWFSGWERGM
Trigger: CATCCCCCTCTCCCATCCAGAGAACCAGCCGGGCCACCTCTCAGGTCCCTCCTGTTTCTTTTCTCTGCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR TCA 72 bp GGGGGTGATGAGAGCGCCCCCTCAGAGTTGGACAAGTaGCTCCGTCAATGTGGCCATTATTCCAGCCACCTC +
Preference number: 3 (lower is better)
Translates to: GGDESAPSELDK*LRQCGHYSSHL
Trigger: GAGGTGGCTGGAATAATGGCCACATTGACGGAGTCACTTGTCCAACTCTGAGGGGGCGCTCTCATCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR CCA 72 bp GTGGTGCAGCCTCGATCCCATCTCTGCTTCACACACTaGGGAGTCCAGGAAACCAAGGCCAGGAGTCAAGTC +
Preference number: 3 (lower is better)
Translates to: VVQPRSHLCFTH*GVQETKARSQV
Trigger: GACTTGACTCCTGGCCTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAGATGGGATCGAGGCTGCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR TCA 72 bp TGTTACCAGCGGCCATGGCTCAGCTACAGTGAACCTTaGAGTGTCCCCAGATACGTCAGACACCGAGGGGCT +
Preference number: 3 (lower is better)
Translates to: CYQRPWLSYSEP*SVPRYVRHRGA
Trigger: AGCCCCTCGGTGTCTGACGTATCTGGGGACACTTCAAGGTTCACTGTAGCTGAGCCATGGCCGCTGGTAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR GCA 72 bp CAGCTCACACCCTGTCCCCTCCACTTCCATGTTGTGTaGCCTCAGGAAGCTTACCTTGCCTCACTGAACCTC +
Preference number: 3 (lower is better)
Translates to: QLTPCPLHFHVV*PQEAYLASLNL
Trigger: GAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACACAACATGGAAGTGGAGGGGACAGGGTGTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR CCA 72 bp CGCCCCCTCAGAGTTGGACAAGTGACTCCGTCAATGTaGCCATTATTCCAGCCACCTCAGGGTTCCTCTTGG +
Preference number: 3 (lower is better)
Translates to: RPLRVGQVTPSM*PLFQPPQGSSW
Trigger: CCAAGAGGAACCCTGAGGTGGCTGGAATAATGGCCACATTGACGGAGTCACTTGTCCAACTCTGAGGGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR CCA 72 bp TGGGTGGAGTGGTGCCGTGGACTGCAGTCCAGCTTCTaGAGTCAGAATGGGTTTGAATCCAGCAGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: WVEWCRGLQSSF*SQNGFESSSCV
Trigger: CACACAGCTGCTGGATTCAAACCCATTCTGACTCCAGAAGCTGGACTGCAGTCCACGGCACCACTCCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR CCA 72 bp TACCTGACTGAGGAACTGGTGGGTGGAGTGGTGCCGTaGACTGCAGTCCAGCTTCTGGAGTCAGAATGGGTT +
Preference number: 3 (lower is better)
Translates to: YLTEELVGGVVP*TAVQLLESEWV
Trigger: AACCCATTCTGACTCCAGAAGCTGGACTGCAGTCCACGGCACCACTCCACCCACCAGTTCCTCAGTCAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CAA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGACTGCCACTTCCTAGCTaGGTGGCTGCCAGCGTGCAC +
Preference number: 3 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRLPLPS*VAASVH
Trigger: GTGCACGCTGGCAGCCACCAAGCTAGGAAGTGGCAG...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR TCA 72 bp CTAGGACAGTTACTCAAGAGGGCTAGTCTGGAACCCTaGTGTCTGTTACCAGCGGCCATGGCTCAGCTACAG +
Preference number: 3 (lower is better)
Translates to: LGQLLKRASLEP*CLLPAAMAQLQ
Trigger: CTGTAGCTGAGCCATGGCCGCTGGTAACAGACATCAGGGTTCCAGACTAGCCCTCTTGAGTAACTGTCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR TCA 72 bp TTTCCCGCTGAAGAAACAGAGATGTGGAGGCAGGCGTaGCCTGTCCCAGCTCTAGGACAGTTACTCAAGAGG +
Preference number: 3 (lower is better)
Translates to: FPAEETEMWRQA*PVPALGQLLKR
Trigger: CCTCTTGAGTAACTGTCCTAGAGCTGGGACAGGTCACGCCTGCCTCCACATCTCTGTTTCTTCAGCGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CAA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGTCACTGAAGCCGATTTaGACCAGACAACTGGCCAAA +
Preference number: 3 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQSLKPI*TRQLAK
Trigger: TTTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGA...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR TCA 72 bp CAAACCCACCCTGAGGCCCACTTGACTGCCAGAATTTaGAAAACGGTCCACCTTGTTTATACGTGCCCGAGT +
Preference number: 3 (lower is better)
Translates to: QTHPEAHLTARI*KTVHLVYTCPS
Trigger: ACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATTCTGGCAGTCAAGTGGGCCTCAGGGTGGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR CCA 72 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTaGAAACCACCACAATCCCACGTGGGAAGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: MQLKQCLIKTRC*KPPQSHVGSQP
Trigger: AGGCTGGCTTCCCACGTGGGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CAA 90 bp ACTCCGTCAATGTGGCCATTATTCCAGCCACCTCAGGGTTCCTCTTGGGGAAACCTTGACTGCCAGAATTaGAAAAACGGTCCACCTTGT +
Preference number: 3 (lower is better)
Translates to: TPSMWPLFQPPQGSSWGNLDCQN*KNGPPC
Trigger: ACAAGGTGGACCGTTTTTCAAATTCTGGCAGTCAAG...GTTTCCCCAAGAGGAACCCTGAGGTGGCTGGAATAATGGCCACATTGACGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CAA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGAAGGGACTTAAGACAGTaGCCTTCACATTTAGCTGCA +
Preference number: 3 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARRDLRQ*PSHLAA
Trigger: TGCAGCTAAATGTGAAGGCAACTGTCTTAAGTCCCT...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CAA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCGCCAGAGCCTTGATCTaGGACTTCCCAGCATCCAGA +
Preference number: 3 (lower is better)
Translates to: STLFIRARVAVFLICRMCARALI*DFPASR
Trigger: TCTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGC...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CAA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAAGGGACTTAAGACAGTaGCCTTCACATTTAGCTGCA +
Preference number: 3 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRRDLRQ*PSHLAA
Trigger: TGCAGCTAAATGTGAAGGCAACTGTCTTAAGTCCCT...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CAA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTAGAAGAGGGAGGACCTTaGGGAGGTCATGAGGTCAGG +
Preference number: 3 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLEEGGP*GGHEVR
Trigger: CCTGACCTCATGACCTCCCAAAGGTCCTCCCTCTTC...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CAA 90 bp GTGTGCCCTCAGGAAGCTTACCTTGCCTCACTGAACCTCAGATTCCTTATCTATCAGAGAAAGTGCACTTaGGGGAACACTCTTATGTGT +
Preference number: 3 (lower is better)
Translates to: VCPQEAYLASLNLRFLIYQRKCT*GNTLMC
Trigger: ACACATAAGAGTGTTCCCCAAAGTGCACTTTCTCTG...ATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR TCA 72 bp GCTTCAGTCGGCCTTAGGAAACTCACTCGAAGTTACTaGTATGGTCTGTTGGTGCTTCCCTGTATTCACATA +
Preference number: 3 (lower is better)
Translates to: ASVGLRKLTRSY*YGLLVLPCIHI
Trigger: TATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGTTTCCTAAGGCCGACTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR TCA 72 bp ATGTTGTGTGCCCTCAGGAAGCTTACCTTGCCTCACTaGACCTCAGATTCCTTATCTATACGACATGCACAT +
Preference number: 3 (lower is better)
Translates to: MLCALRKLTLPH*TSDSLSIRHAH
Trigger: ATGTGCATGTCGTATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACACAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR-3UTR CAA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCCAGAGAAAGTGCACTTaGGGGAACACTCTTATGTGT +
Preference number: 3 (lower is better)
Translates to: STLFIRARVAVFLICRMCQRKCT*GNTLMC
Trigger: ACACATAAGAGTGTTCCCCAAAGTGCACTTTCTCTG...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR GCA 72 bp GGAAACTCACTCGAAGTTACTGATATGGTCTGTTGGTaGTTCCCTGTATTCACATATTGGAAACTTGATCCC +
Preference number: 3 (lower is better)
Translates to: GNSLEVTDMVCW*FPVFTYWKLDP
Trigger: GGGATCAAGTTTCCAATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CAA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCTTCTGTATTATTTATTaGTGTACACCAGTGTCAGGG +
Preference number: 3 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSFCIIY*CTPVSG
Trigger: CCCTGACACTGGTGTACACAAATAAATAATACAGAA...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR CCA 72 bp GATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTaGAAACTTGATCCCCAATGTAACAGTATGAAGAGG +
Preference number: 3 (lower is better)
Translates to: DMVCWCFPVFTY*KLDPQCNSMKR
Trigger: CCTCTTCATACTGTTACATTGGGGATCAAGTTTCCAATATGTGAATACAGGGAAGCACCAACAGACCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR-3UTR CAA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCTTCTGTATTATTTATTaGTGTACACCAGTGTCAGGG +
Preference number: 3 (lower is better)
Translates to: STLFIRARVAVFLICRMCFCIIY*CTPVSG
Trigger: CCCTGACACTGGTGTACACAAATAAATAATACAGAA...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR CCA 72 bp TTAGGAAACTCACTCGAAGTTACTGATATGGTCTGTTaGTGCTTCCCTGTATTCACATATTGGAAACTTGAT +
Preference number: 3 (lower is better)
Translates to: LGNSLEVTDMVC*CFPVFTYWKLD
Trigger: ATCAAGTTTCCAATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGTTTCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR GCA 72 bp CATTTGTTGACTGTTTTAACACTCCATTCTCTGCAGTaGATACATATTCTCATTTATTCCCACAACAGATGC +
Preference number: 3 (lower is better)
Translates to: HLLTVLTLHSLQ*IHILIYSHNRC
Trigger: GCATCTGTTGTGGGAATAAATGAGAATATGTATGCACTGCAGAGAATGGAGTGTTAAAACAGTCAACAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp GACCTCGGAGCCCAGGTGGACCCCAGCTCACACCCTGTCCCCTCCACTTCCATGCCCCTGCGGTGGGAGTaGGCTGGGCCAGCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DLGAQVDPSSHPVPSTSMPLRWE*AGPALG
Trigger: TCCCAGCGCTGGCCCAGCCCACTCCCACCGCAGGGG...CATGGAAGTGGAGGGGACAGGGTGTGAGCTGGGGTCCACCTGGGCTCCGAGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp GACCTCGGAGCCCAGGTGGACCCCAGCTCACACCCTGTCCCCTCCACTTCCATGGAGAGGCCCCTGCGGTaGGAGTGGGCTGGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: DLGAQVDPSSHPVPSTSMERPLR*EWAGPA
Trigger: CGCTGGCCCAGCCCACTCCCACCGCAGGGGCCTCTC...CATGGAAGTGGAGGGGACAGGGTGTGAGCTGGGGTCCACCTGGGCTCCGAGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp AGGAGGGACCTGAGAGGTGGCCCGGCTGGTTCTCTGGATGGGAGAGGGGGATGGCCTGGGCACCGCCAGTaGGAGCCCTGCACAGAGGCG +
Preference number: 4 (lower is better)
Translates to: RRDLRGGPAGSLDGRGGWPGHRQ*EPCTEA
Trigger: CGCCTCTGTGCAGGGCTCTCACTGGCGGTGCCCAGG...CCATCCCCCTCTCCCATCCAGAGAACCAGCCGGGCCACCTCTCAGGTCCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp GCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTGCTGCGATGGGCCTGCTaGGCACTGGAGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ALLTKRAAIWRPSWAPPVLRWAC*ALEPSQ
Trigger: CTGGCTGGGCTCCAGTGCCCAGCAGGCCCATCGCAG...CACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp AGGAGGGACCTGAGAGGTGGCCCGGCTGGTTCTCTGGATGGGAGAGGGGGATGGAAGCGCGCAGCCATCTaGCGTCCGTCCTGGGCACCG +
Preference number: 4 (lower is better)
Translates to: RRDLRGGPAGSLDGRGGWKRAAI*RPSWAP
Trigger: CGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTT...CCATCCCCCTCTCCCATCCAGAGAACCAGCCGGGCCACCTCTCAGGTCCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp GCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTGGGTTCGTGTTGCGGCTaGAGGTCTTCCCGCACTCGC +
Preference number: 4 (lower is better)
Translates to: ALLTKRAAIWRPSWAPPVGSCCG*RSSRTR
Trigger: GCGAGTGCGGGAAGACCTTCAGCCGCAACACGAACC...CACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp AGGAGGGACCTGAGAGGTGGCCCGGCTGGTTCTCTGGATGGGAGAGGGGGATGGAGAGGCGCTCAGGTGTaGATCCGCAGGTGGCGCGTC +
Preference number: 4 (lower is better)
Translates to: RRDLRGGPAGSLDGRGGWRGAQV*IRRWRV
Trigger: GACGCGCCACCTGCGGATTCACACCTGAGCGCCTCT...CCATCCCCCTCTCCCATCCAGAGAACCAGCCGGGCCACCTCTCAGGTCCCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp AGGAGGGACCTGAGAGGTGGCCCGGCTGGTTCTCTGGATGGGAGAGGGGGATGGACCACCGGGACTCACTaGGATGGGCCTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RRDLRGGPAGSLDGRGGWTTGTH*DGPAGH
Trigger: GTGCCCAGCAGGCCCATCGCAGTGAGTCCCGGTGGT...CCATCCCCCTCTCCCATCCAGAGAACCAGCCGGGCCACCTCTCAGGTCCCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp AGCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTATCTGGCGTCCGTCCTaGGCACCGCCAGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: STADKARSHLASVLGTASIWRPS*APPVRA
Trigger: GGCTCTCACTGGCGGTGCCCAGGACGGACGCCAGAT...ACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp AGCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTACGTGGAGCCCTGAGTaGGGAGCTTGCCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: STADKARSHLASVLGTASTWSPE*GACPGG
Trigger: GCCTCCTGGGCAAGCTCCCCACTCAGGGCTCCACGT...ACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp AGCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTCGGGACTCACTGCGATaGGCCTGCTGGGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: STADKARSHLASVLGTASRDSLR*ACWALE
Trigger: CTCCAGTGCCCAGCAGGCCCATCGCAGTGAGTCCCG...ACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp AGCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTAAGACAGGCCTGCGGTaGCCAACAGTGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: STADKARSHLASVLGTASKTGLR*PTVLGL
Trigger: CAGGCCCAGCACTGTTGGTCACCGCAGGCCTGTCTT...ACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp GACCTCGGAGCCCAGGTGGACCCCAGCTCACACCCTGTCCCCTCCACTTCCATGGGTTCGTGTTGCGGCTaGAGGTCTTCCCGCACTCGC +
Preference number: 4 (lower is better)
Translates to: DLGAQVDPSSHPVPSTSMGSCCG*RSSRTR
Trigger: GCGAGTGCGGGAAGACCTTCAGCCGCAACACGAACC...CATGGAAGTGGAGGGGACAGGGTGTGAGCTGGGGTCCACCTGGGCTCCGAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp AGCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTTGGTGGGTGGAGTGGTaGCGTGGACTGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: STADKARSHLASVLGTASWWVEW*RGLQSS
Trigger: GCTGGACTGCAGTCCACGGCACCACTCCACCCACCA...ACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp GCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTGCAGGGAAACGGTGGGTaGAGGGATAGGAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ALLTKRAAIWRPSWAPPVQGNGG*RDRKAL
Trigger: GAGGGCCTTCCTATCCCTCCACCCACCGTTTCCCTG...CACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp GTAGTCCAGTGTAGGCAAGGAGCACGGACCTCGGAGCCCAGGTGGACCCCAGCTACCTCGGAGCCCAGGTaGACCCCAGCTCACACCCTG +
Preference number: 4 (lower is better)
Translates to: VVQCRQGARTSEPRWTPATSEPR*TPAHTL
Trigger: CAGGGTGTGAGCTGGGGTCCACCTGGGCTCCGAGGT...AGCTGGGGTCCACCTGGGCTCCGAGGTCCGTGCTCCTTGCCTACACTGGACTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp AGCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTATGTGGAGGCAGGCGTaGCCTGTCCCAGCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: STADKARSHLASVLGTASMWRQA*PVPALG
Trigger: TCCTAGAGCTGGGACAGGTCACGCCTGCCTCCACAT...ACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp GCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTGGAATCAAACCCACCCTaGGGCCCACTTGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: ALLTKRAAIWRPSWAPPVESNPP*GPLDCQ
Trigger: CTGGCAGTCAAGTGGGCCTCAGGGTGGGTTTGATTC...CACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp AGGAGGGACCTGAGAGGTGGCCCGGCTGGTTCTCTGGATGGGAGAGGGGGATGGGGGGGATGGTGGTGGTaGAGCCTCGATCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: RRDLRGGPAGSLDGRGGWGGWWW*SLDPIS
Trigger: AGAGATGGGATCGAGGCTGCACCACCACCATCCCCC...CCATCCCCCTCTCCCATCCAGAGAACCAGCCGGGCCACCTCTCAGGTCCCTCCT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp CTGAAGCAGAGTGAGCAGGGGGAGCGGGACGGGAGCTGGGAGAGGCTGCGTCACCCAGAGGAGCCTCAATaGCCTCCACATCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LKQSEQGERDGSWERLRHPEEPQ*PPHQLG
Trigger: CCCAAGCTGATGTGGAGGGCATTGAGGCTCCTCTGG...GTGACGCAGCCTCTCCCAGCTCCCGTCCCGCTCCCCCTGCTCACTCTGCTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp GCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTGTGCCACTTCCTAGCTTaGTGGCTGCCAGCGTGCACT +
Preference number: 4 (lower is better)
Translates to: ALLTKRAAIWRPSWAPPVCHFLA*WLPACT
Trigger: AGTGCACGCTGGCAGCCACCAAGCTAGGAAGTGGCA...CACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp AGGAGGGACCTGAGAGGTGGCCCGGCTGGTTCTCTGGATGGGAGAGGGGGATGGTCATCAGTCAGCAGCTaGGCAGCCATCCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RRDLRGGPAGSLDGRGGWSSVSS*AAIPLL
Trigger: CAGCAGAGGGATGGCTGCTCAGCTGCTGACTGATGA...CCATCCCCCTCTCCCATCCAGAGAACCAGCCGGGCCACCTCTCAGGTCCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp GCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTGTTCTCACAGCACTGCTaGCAAAGCGCGCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: ALLTKRAAIWRPSWAPPVFSQHC*QSAQPS
Trigger: AGATGGCTGCGCGCTTTGTCAGCAGTGCTGTGAGAA...CACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp GTAGTCCAGTGTAGGCAAGGAGCACGGACCTCGGAGCCCAGGTGGACCCCAGCTCAGGGAAACGGTGGGTaGAGGGATAGGAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: VVQCRQGARTSEPRWTPAQGNGG*RDRKAL
Trigger: GAGGGCCTTCCTATCCCTCCACCCACCGTTTCCCTG...AGCTGGGGTCCACCTGGGCTCCGAGGTCCGTGCTCCTTGCCTACACTGGACTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp AGCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTAGGTCAGGGCCCTTGTaGCTGGGATTAGCACCCTTA +
Preference number: 4 (lower is better)
Translates to: STADKARSHLASVLGTASRSGPL*LGLAPL
Trigger: TAAGGGTGCTAATCCCAGTCACAAGGGCCCTGACCT...ACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp AGCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTTGCTGGAGAAGTTCTTaGCACGCCTTACGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: STADKARSHLASVLGTASCWRSS*HALRVD
Trigger: GTCCACCCGTAAGGCGTGGCAAGAACTTCTCCAGCA...ACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp TCCCATCTCTGCTTCACACACTGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAAGGCACAGGTAGAGGGTaGGCGCGACCCCGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SHLCFTHWGVQETKARSQGTGRG*ARPRSH
Trigger: GTGGCTGCGGGGTCGCGCCCACCCTCTACCTGTGCC...TTGACTCCTGGCCTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAGATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp GTAGTCCAGTGTAGGCAAGGAGCACGGACCTCGGAGCCCAGGTGGACCCCAGCTTGCTGGAGAAGTTCTTaGCACGCCTTACGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: VVQCRQGARTSEPRWTPACWRSS*HALRVD
Trigger: GTCCACCCGTAAGGCGTGGCAAGAACTTCTCCAGCA...AGCTGGGGTCCACCTGGGCTCCGAGGTCCGTGCTCCTTGCCTACACTGGACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp AGGAGGGACCTGAGAGGTGGCCCGGCTGGTTCTCTGGATGGGAGAGGGGGATGGTCACCCAGGCTGGAGTaGAATGGCATGATCATACCT +
Preference number: 4 (lower is better)
Translates to: RRDLRGGPAGSLDGRGGWSPRLE*NGMIIP
Trigger: AGGTATGATCATGCCATTGCACTCCAGCCTGGGTGA...CCATCCCCCTCTCCCATCCAGAGAACCAGCCGGGCCACCTCTCAGGTCCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGAGGCACAGGTAGAGGGTaGGCGCGACCCCGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARGTGRG*ARPRSH
Trigger: GTGGCTGCGGGGTCGCGCCCACCCTCTACCTGTGCC...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp GTAGTCCAGTGTAGGCAAGGAGCACGGACCTCGGAGCCCAGGTGGACCCCAGCTTGTTACCAGCGGCCATaGCTCAGCTACAGTGAACCT +
Preference number: 4 (lower is better)
Translates to: VVQCRQGARTSEPRWTPACYQRP*LSYSEP
Trigger: AGGTTCACTGTAGCTGAGCCATGGCCGCTGGTAACA...AGCTGGGGTCCACCTGGGCTCCGAGGTCCGTGCTCCTTGCCTACACTGGACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp GTAGTCCAGTGTAGGCAAGGAGCACGGACCTCGGAGCCCAGGTGGACCCCAGCTAACTCAGGCCGGAGTTaGCACTGTAATCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VVQCRQGARTSEPRWTPANSGRS*HCNPEA
Trigger: TGCCTCAGGATTACAGTGCCAACTCCGGCCTGAGTT...AGCTGGGGTCCACCTGGGCTCCGAGGTCCGTGCTCCTTGCCTACACTGGACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp TCCCATCTCTGCTTCACACACTGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAATTCCCACACTCCTTCTaGGCCAGGACCCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: SHLCFTHWGVQETKARSQFPHSF*ARTPGT
Trigger: GGTGCCAGGGGTCCTGGCTCAGAAGGAGTGTGGGAA...TTGACTCCTGGCCTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAGATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGAGTGGCTGAAGCAGAGTaGGCAGGGGGAGCGGGACGG +
Preference number: 4 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARVAEAE*AGGAGR
Trigger: CCGTCCCGCTCCCCCTGCTCACTCTGCTTCAGCCAC...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp AGGAGGGACCTGAGAGGTGGCCCGGCTGGTTCTCTGGATGGGAGAGGGGGATGGGAGGTCTTGCTATGTTaGCTAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: RRDLRGGPAGSLDGRGGWEVLLC*LGWSQT
Trigger: AGTTTGAGACCAGCCTAGGCAACATAGCAAGACCTC...CCATCCCCCTCTCCCATCCAGAGAACCAGCCGGGCCACCTCTCAGGTCCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAATCCCCGCGGCCTCTCTaGCCAGCTGCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQSPRPL*PAAWFP
Trigger: TGGGAACCAGGCAGCTGGCCAGAGAGGCCGCGGGGA...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp AGCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTTCAAGAGGGCTAGTCTaGAACCCTGATGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: STADKARSHLASVLGTASSRGLV*NPDVCY
Trigger: GTAACAGACATCAGGGTTCCAGACTAGCCCTCTTGA...ACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp GACCTCGGAGCCCAGGTGGACCCCAGCTCACACCCTGTCCCCTCCACTTCCATGCCCTCCACATCAGCTTaGGTTGCAGAGAAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: DLGAQVDPSSHPVPSTSMPSTSA*VAEKRN
Trigger: GTTTCTTTTCTCTGCAACCCAAGCTGATGTGGAGGG...CATGGAAGTGGAGGGGACAGGGTGTGAGCTGGGGTCCACCTGGGCTCCGAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp GTAGTCCAGTGTAGGCAAGGAGCACGGACCTCGGAGCCCAGGTGGACCCCAGCTAACGAAAGCACAGTGTaGCTGAAGCAGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VVQCRQGARTSEPRWTPANESTV*LKQSEQ
Trigger: CTGCTCACTCTGCTTCAGCCACACTGTGCTTTCGTT...AGCTGGGGTCCACCTGGGCTCCGAGGTCCGTGCTCCTTGCCTACACTGGACTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp TCCCATCTCTGCTTCACACACTGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAATCCGCTCGTGCTGGGTaGGAGAGGAAGTCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: SHLCFTHWGVQETKARSQSARAG*ERKSSG
Trigger: TCCGGAAGACTTCCTCTCTCACCCAGCACGAGCGGA...TTGACTCCTGGCCTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAGATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGAGGTGCATGTTCTGGCTaGAGGCTCGCCCGCACTCGG +
Preference number: 4 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARGACSG*RLARTR
Trigger: CCGAGTGCGGGCGAGCCTTCAGCCAGAACATGCACC...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAAGAGGCGCTCAGGTGTaGATCCGCAGGTGGCGCGTC +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQRGAQV*IRRWRV
Trigger: GACGCGCCACCTGCGGATTCACACCTGAGCGCCTCT...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp CTGACATGGGTGACATCCACATCTATAAAGTGTCTTCTCAGCACCACCGGGACTCAACAGTGCTGGGCCTaGACGCCGTCTCCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LTWVTSTSIKCLLSTTGTQQCWA*TPSPRG
Trigger: GCCTCGGGGAGACGGCGTGCAGGCCCAGCACTGTTG...AGTCCCGGTGGTGCTGAGAAGACACTTTATAGATGTGGATGTCACCCATGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGTGGTGGCTGCCAGCGTaGACTGCAGGGAAACGGTGG +
Preference number: 4 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQWWLPA*TAGKRW
Trigger: CCACCGTTTCCCTGCAGTGCACGCTGGCAGCCACCA...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATTCCCCGCGGCCTCTCTaGCCAGCTGCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: THGENADGDKLHLDSRMYSPRPL*PAAWFP
Trigger: TGGGAACCAGGCAGCTGGCCAGAGAGGCCGCGGGGA...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ACTCCGTCAATGTGGCCATTATTCCAGCCACCTCAGGGTTCCTCTTGGGGAAACGTCGTCCAGCCGTGGTaGGACCAGGACACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: TPSMWPLFQPPQGSSWGNVVQPW*DQDTAL
Trigger: CAAGGCTGTGTCCTGGTCCCACCACGGCTGGACGAC...GTTTCCCCAAGAGGAACCCTGAGGTGGCTGGAATAATGGCCACATTGACGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATGGGGTCGTCCAGCCGTaGTGGGACCAGGACACAGCC +
Preference number: 4 (lower is better)
Translates to: THGENADGDKLHLDSRMYGVVQP*WDQDTA
Trigger: GGCTGTGTCCTGGTCCCACCACGGCTGGACGACCCC...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATAAGCGCGCAGCCATCTaGCGTCCGTCCTGGGCACCG +
Preference number: 4 (lower is better)
Translates to: THGENADGDKLHLDSRMYKRAAI*RPSWAP
Trigger: CGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTT...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp GCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTGACTGATATGGTCTGTTaGTGCTTCCCTGTATTCACA +
Preference number: 4 (lower is better)
Translates to: ALLTKRAAIWRPSWAPPVTDMVC*CFPVFT
Trigger: TGTGAATACAGGGAAGCACCAACAGACCATATCAGT...CACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACGGGCCTGCTGGGCACTaGAGCCCAGCCAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: ITENHSYGSNDESLNQTHGPAGH*SPARPT
Trigger: TGTCGGCCTGGCTGGGCTCCAGTGCCCAGCAGGCCC...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
3UTR CAA 72 bp AATGTGGCCATTATTCCAGCCACCTCAGGGTTCCTCTaGGGGAAACGTGGAGCCCTGAGTGGGGAGCTTGCC +
Preference number: 4 (lower is better)
Translates to: NVAIIPATSGFL*GKRGALSGELA
Trigger: GGCAAGCTCCCCACTCAGGGCTCCACGTTTCCCCAAGAGGAACCCTGAGGTGGCTGGAATAATGGCCACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGAAAGACAGGCCTGCGGTaGCCAACAGTGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARKTGLR*PTVLGL
Trigger: CAGGCCCAGCACTGTTGGTCACCGCAGGCCTGTCTT...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp ACTCCGTCAATGTGGCCATTATTCCAGCCACCTCAGGGTTCCTCTTGGGGAAACCTCTGCTGCCCACGGTaGATAGGAAGACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TPSMWPLFQPPQGSSWGNLCCPR*IGRQAC
Trigger: GCAGGCCTGTCTTCCTATTCACCGTGGGCAGCAGAG...GTTTCCCCAAGAGGAACCCTGAGGTGGCTGGAATAATGGCCACATTGACGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGCTCTGCTGCCCACGGTaGATAGGAAGACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQLCCPR*IGRQAC
Trigger: GCAGGCCTGTCTTCCTATTCACCGTGGGCAGCAGAG...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCCCTGGGCACCGCCAGTaGGAGCCCTGCACAGAGGCG +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSPGHRQ*EPCTEA
Trigger: CGCCTCTGTGCAGGGCTCTCACTGGCGGTGCCCAGG...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAAGGAGGGGGCATGTGTaGTCAGCCAGCCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQRRGHV*SASPST
Trigger: TGTGGAGGGGCTGGCTGATCACACATGCCCCCTCCT...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp GCATTTACTCCAAGTGATAAAGGGGTCATTCAGACCCCACCCAGCACCCATGACCCCACCTCCGTCTCTTaGGTAGCTGGGACCACAGGC +
Preference number: 4 (lower is better)
Translates to: AFTPSDKGVIQTPPSTHDPTSVS*VAGTTG
Trigger: GCCTGTGGTCCCAGCTACTCAAGAGACGGAGGTGGG...GTCATGGGTGCTGGGTGGGGTCTGAATGACCCCTTTATCACTTGGAGTAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGATGCGGTGACCAACAGTaGTGGGCCTGCACGCCGTCT +
Preference number: 4 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARCGDQQ*WACTPS
Trigger: AGACGGCGTGCAGGCCCAGCACTGTTGGTCACCGCA...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATCTCCCACTCTGCACCTaGATCTCCCCGCGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: THGENADGDKLHLDSRMYLPLCT*ISPRPL
Trigger: GAGAGGCCGCGGGGAGATGCAGGTGCAGAGTGGGAG...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATGGTGACCAACAGTGCTaGGCCTGCACGCCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: THGENADGDKLHLDSRMYGDQQC*ACTPSP
Trigger: GGGAGACGGCGTGCAGGCCCAGCACTGTTGGTCACC...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp GCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTGTTATACGTGCCCGAGTaGCTGTTTTTCTTATTTGCA +
Preference number: 4 (lower is better)
Translates to: ALLTKRAAIWRPSWAPPVLYVPE*LFFLFA
Trigger: TGCAAATAAGAAAAACAGCCACTCGGGCACGTATAA...CACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAGAGGGACCTGAGAGGTaGCCCGGCTGGTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQEGPER*PGWFSG
Trigger: TCCAGAGAACCAGCCGGGCCACCTCTCAGGTCCCTC...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATTTCCCACACTCCTTCTaGGCCAGGACCCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: THGENADGDKLHLDSRMYFPHSF*ARTPGT
Trigger: GGTGCCAGGGGTCCTGGCTCAGAAGGAGTGTGGGAA...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAGGGACGAGCGCCCCGTaGAGTGCTTCTTGCAGATGT +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQGTSAP*SASCRC
Trigger: ACATCTGCAAGAAGCACTTCACGGGGCGCTCGTCCC...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAAGGAGGGGGCATGTGTaGTCAGCCAGCCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRRRGHV*SASPST
Trigger: TGTGGAGGGGCTGGCTGATCACACATGCCCCCTCCT...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp ACTCCGTCAATGTGGCCATTATTCCAGCCACCTCAGGGTTCCTCTTGGGGAAACGCTAGTCTGGAACCCTaGTGTCTGTTACCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: TPSMWPLFQPPQGSSWGNASLEP*CLLPAA
Trigger: GGCCGCTGGTAACAGACATCAGGGTTCCAGACTAGC...GTTTCCCCAAGAGGAACCCTGAGGTGGCTGGAATAATGGCCACATTGACGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp GCATTTACTCCAAGTGATAAAGGGGTCATTCAGACCCCACCCAGCACCCATGACATGTGGAGGCAGGCGTaGCCTGTCCCAGCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: AFTPSDKGVIQTPPSTHDMWRQA*PVPALG
Trigger: TCCTAGAGCTGGGACAGGTCACGCCTGCCTCCACAT...GTCATGGGTGCTGGGTGGGGTCTGAATGACCCCTTTATCACTTGGAGTAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp GACCTCGGAGCCCAGGTGGACCCCAGCTCACACCCTGTCCCCTCCACTTCCATGCAGCATCCAGAACCATaGGTGACAAATTTCTATTGT +
Preference number: 4 (lower is better)
Translates to: DLGAQVDPSSHPVPSTSMQHPEP*VTNFYC
Trigger: ACAATAGAAATTTGTCACTCATGGTTCTGGATGCTG...CATGGAAGTGGAGGGGACAGGGTGTGAGCTGGGGTCCACCTGGGCTCCGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAGCCTCTCTGGCCAGCTaGCTGGTTCCCACACTCCTT +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQASLAS*LVPTLL
Trigger: AAGGAGTGTGGGAACCAGGCAGCTGGCCAGAGAGGC...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp TGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAAGTCCTGAGAAATTCAATATGTCTCCCACTCTGCACCTaGATCTCCCCGCGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: WGVQETKARSQVLRNSICLPLCT*ISPRPL
Trigger: GAGAGGCCGCGGGGAGATGCAGGTGCAGAGTGGGAG...ACATATTGAATTTCTCAGGACTTGACTCCTGGCCTTGGTTTCCTGGACTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGACAATGGCTCCCACTCTaGACCTGCATCTCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRQWLPL*TCISPR
Trigger: CCGCGGGGAGATGCAGGTGCAGAGTGGGAGCCATTG...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATGCTGCCAGCGTGCACTaGAGGGAAACGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: THGENADGDKLHLDSRMYAASVH*RETVGG
Trigger: TCCACCCACCGTTTCCCTGCAGTGCACGCTGGCAGC...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCTGCCAGCGTGCACTaGAGGGAAACGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRAASVH*RETVGG
Trigger: TCCACCCACCGTTTCCCTGCAGTGCACGCTGGCAGC...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACCCTGAGTGGGGAGCTTaGCCAGGAGGCGGGAGACCA +
Preference number: 4 (lower is better)
Translates to: ITENHSYGSNDESLNQTHPEWGA*PGGGRP
Trigger: TGGTCTCCCGCCTCCTGGGCAAGCTCCCCACTCAGG...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAGTGACCTTGGGCAGGTaGCTGAACCTCTGCGAGCCT +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQVTLGR*LNLCEP
Trigger: AGGCTCGCAGAGGTTCAGGCACCTGCCCAAGGTCAC...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACGGTGACCAACAGTGCTaGGCCTGCACGCCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: ITENHSYGSNDESLNQTHGDQQC*ACTPSP
Trigger: GGGAGACGGCGTGCAGGCCCAGCACTGTTGGTCACC...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGAGCCACGCCTTACGGGTaGACAGGCCCCCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARATPYG*TGPLFC
Trigger: ACAGAAAAGGGGGCCTGTCCACCCGTAAGGCGTGGC...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGCACTTCCTAGCTTGGTaGCTGCCAGCGTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQHFLAW*LPACTA
Trigger: TGCAGTGCACGCTGGCAGCCACCAAGCTAGGAAGTG...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGTGCCACTTCCTAGCTTaGTGGCTGCCAGCGTGCACT +
Preference number: 4 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQCHFLA*WLPACT
Trigger: AGTGCACGCTGGCAGCCACCAAGCTAGGAAGTGGCA...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp GTGTGCCCTCAGGAAGCTTACCTTGCCTCACTGAACCTCAGATTCCTTATCTATGGGAGAGGGGGATGGTaGTGGTGCAGCCTCGATCCC +
Preference number: 4 (lower is better)
Translates to: VCPQEAYLASLNLRFLIYGRGGW*WCSLDP
Trigger: GGGATCGAGGCTGCACCACCACCATCCCCCTCTCCC...ATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp CTGACATGGGTGACATCCACATCTATAAAGTGTCTTCTCAGCACCACCGGGACTGCCCGGCTGGTTCTCTaGATGGGAGAGGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: LTWVTSTSIKCLLSTTGTARLVL*MGEGDG
Trigger: ACCATCCCCCTCTCCCATCCAGAGAACCAGCCGGGC...AGTCCCGGTGGTGCTGAGAAGACACTTTATAGATGTGGATGTCACCCATGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp TGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAAGTCCTGAGAAATTCAATATGTGAGCGGGACGGGAGCTaGGAGAGGCTGCGTCACACA +
Preference number: 4 (lower is better)
Translates to: WGVQETKARSQVLRNSICERDGS*ERLRHT
Trigger: TGTGTGACGCAGCCTCTCCCAGCTCCCGTCCCGCTC...ACATATTGAATTTCTCAGGACTTGACTCCTGGCCTTGGTTTCCTGGACTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATGGGACGAGCGCCCCGTaGAGTGCTTCTTGCAGATGT +
Preference number: 4 (lower is better)
Translates to: THGENADGDKLHLDSRMYGTSAP*SASCRC
Trigger: ACATCTGCAAGAAGCACTTCACGGGGCGCTCGTCCC...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATGAGGGGCTTGCTTTCTaGGGCTCAGTAAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: THGENADGDKLHLDSRMYEGLAF*GSVRRG
Trigger: CCCCCTCCTTACTGAGCCTCAGAAAGCAAGCCCCTC...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAGCTAGTCTGGAACCCTaGTGTCTGTTACCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQASLEP*CLLPAA
Trigger: GGCCGCTGGTAACAGACATCAGGGTTCCAGACTAGC...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp GTCCAGGAAACCAAGGCCAGGAGTCAAGTCCTGAGAAATTCAATATGTCCATCTGGAAACGTGGAGCCCTaGGTGGGGAGCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VQETKARSQVLRNSICPSGNVEP*VGSLPR
Trigger: CCTGGGCAAGCTCCCCACTCAGGGCTCCACGTTTCC...AGATGGACATATTGAATTTCTCAGGACTTGACTCCTGGCCTTGGTTTCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACCAATGGCTCCCACTCTaGACCTGCATCTCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: ITENHSYGSNDESLNQTHQWLPL*TCISPR
Trigger: CCGCGGGGAGATGCAGGTGCAGAGTGGGAGCCATTG...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp TCCCATCTCTGCTTCACACACTGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAAAGACACCGAGGGGCTTaGTTTCTGAGGCTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: SHLCFTHWGVQETKARSQRHRGA*FLRLSK
Trigger: CTTACTGAGCCTCAGAAAGCAAGCCCCTCGGTGTCT...TTGACTCCTGGCCTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAGATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp GTGTGCCCTCAGGAAGCTTACCTTGCCTCACTGAACCTCAGATTCCTTATCTATGAAGCTCAGCGTGGGTaGTGGGCCAGGAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VCPQEAYLASLNLRFLIYEAQRG*WARKGE
Trigger: CTCTCCCTTCCTGGCCCAGCACCCACGCTGAGCTTC...ATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp TGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAAGTCCTGAGAAATTCAATATGTCTGAGCCAGGACCCCTaGCACCATTCCTCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: WGVQETKARSQVLRNSICLSQDP*HHSSWV
Trigger: GACCCACGAGGAATGGTGCCAGGGGTCCTGGCTCAG...ACATATTGAATTTCTCAGGACTTGACTCCTGGCCTTGGTTTCCTGGACTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCGGGGTCGTCCAGCCGTaGTGGGACCAGGACACAGCC +
Preference number: 4 (lower is better)
Translates to: STLFIRARVAVFLICRMCGVVQP*WDQDTA
Trigger: GGCTGTGTCCTGGTCCCACCACGGCTGGACGACCCC...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGTGGATCCGCTCGTGCTaGGTGAGAGAGGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQWIRSC*VREEVF
Trigger: GAAGACTTCCTCTCTCACCCAGCACGAGCGGATCCA...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGACACTTCCTAGCTTGGTaGCTGCCAGCGTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARHFLAW*LPACTA
Trigger: TGCAGTGCACGCTGGCAGCCACCAAGCTAGGAAGTG...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGGCTGGTTCTCTGGATaGGAGAGGGGGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRGWFSG*ERGMVV
Trigger: CACCACCATCCCCCTCTCCCATCCAGAGAACCAGCC...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCGGCTTGGGTCAGGCCTaGGGACACAGGGACACAGGG +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSGLGQA*GHRDTG
Trigger: CCCTGTGTCCCTGTGTCCCCAGGCCTGACCCAAGCC...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCGCTCAGCGTGGGTGCTaGGCCAGGAAGGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: STLFIRARVAVFLICRMCAQRGC*ARKGEA
Trigger: GGCCTCTCCCTTCCTGGCCCAGCACCCACGCTGAGC...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp TGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAAGTCCTGAGAAATTCAATATGTGGGACGAGCGCTCGATaGAGTGCTTCCCACAGGTGT +
Preference number: 4 (lower is better)
Translates to: WGVQETKARSQVLRNSICGTSAR*SASHRC
Trigger: ACACCTGTGGGAAGCACTTCATCGAGCGCTCGTCCC...ACATATTGAATTTCTCAGGACTTGACTCCTGGCCTTGGTTTCCTGGACTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp GGACAGATGTATGGGATAGAAGACTTGTTAAAAAGCAGGTTCCTGACCTGCTTGGGTGCATGTTCTGGCTaGAGGCTCGCCCGCACTCGG +
Preference number: 4 (lower is better)
Translates to: GQMYGIEDLLKSRFLTCLGACSG*RLARTR
Trigger: CCGAGTGCGGGCGAGCCTTCAGCCAGAACATGCACC...CAAGCAGGTCAGGAACCTGCTTTTTAACAAGTCTTCTATCCCATACATCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGATTCTCACAGCACTGCTaGCAAAGCGCGCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARFSQHC*QSAQPS
Trigger: AGATGGCTGCGCGCTTTGTCAGCAGTGCTGTGAGAA...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp GTGTGCCCTCAGGAAGCTTACCTTGCCTCACTGAACCTCAGATTCCTTATCTATGAGGGGCTTGCTTTCTaGGGCTCAGTAAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VCPQEAYLASLNLRFLIYEGLAF*GSVRRG
Trigger: CCCCCTCCTTACTGAGCCTCAGAAAGCAAGCCCCTC...ATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp GTGTGCCCTCAGGAAGCTTACCTTGCCTCACTGAACCTCAGATTCCTTATCTATCCTTGGGCAGGTGCCTaGACCTCTGCGAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: VCPQEAYLASLNLRFLIYPWAGA*TSASLF
Trigger: AAACAGGCTCGCAGAGGTTCAGGCACCTGCCCAAGG...ATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCTGCGGTGACCAACAGTaGTGGGCCTGCACGCCGTCT +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSCGDQQ*WACTPS
Trigger: AGACGGCGTGCAGGCCCAGCACTGTTGGTCACCGCA...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAATCTTCCGGAAGGCCTTaGCACACACGTCGCACACAT +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQSSGRP*HTRRTH
Trigger: ATGTGTGCGACGTGTGTGGCAAGGCCTTCCGGAAGA...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGAGACACCGAGGGGCTTaGTTTCTGAGGCTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQRHRGA*FLRLSK
Trigger: CTTACTGAGCCTCAGAAAGCAAGCCCCTCGGTGTCT...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp GCATTTACTCCAAGTGATAAAGGGGTCATTCAGACCCCACCCAGCACCCATGACCAACCGGCAAACTCCTaGCACTTCCTAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: AFTPSDKGVIQTPPSTHDQPANS*HFLAWW
Trigger: CCACCAAGCTAGGAAGTGGCAGGAGTTTGCCGGTTG...GTCATGGGTGCTGGGTGGGGTCTGAATGACCCCTTTATCACTTGGAGTAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATAGTGGTGCCGTGGACTaGAGTCCAGCTTCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: THGENADGDKLHLDSRMYSGAVD*SPASGV
Trigger: GACTCCAGAAGCTGGACTGCAGTCCACGGCACCACT...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp GTGTGCCCTCAGGAAGCTTACCTTGCCTCACTGAACCTCAGATTCCTTATCTATGTCAGGTGCATGTTCTaGCTGAAGGCTCGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: VCPQEAYLASLNLRFLIYVRCMF*LKARPH
Trigger: GTGCGGGCGAGCCTTCAGCCAGAACATGCACCTGAC...ATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACGTCAGGTGCATGTTCTaGCTGAAGGCTCGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: ITENHSYGSNDESLNQTHVRCMF*LKARPH
Trigger: GTGCGGGCGAGCCTTCAGCCAGAACATGCACCTGAC...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCTCCGCTCGTGCTGGGTaGGAGAGGAAGTCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSSARAG*ERKSSG
Trigger: TCCGGAAGACTTCCTCTCTCACCCAGCACGAGCGGA...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGAGCTACAGTGAACCTTaGAGTGTCCCCAGATACGTC +
Preference number: 4 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQSYSEP*SVPRYV
Trigger: GACGTATCTGGGGACACTTCAAGGTTCACTGTAGCT...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAATGGCTCAGCTACAGTaGACCTTGAAGTGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQMAQLQ*TLKCPQ
Trigger: CTGGGGACACTTCAAGGTTCACTGTAGCTGAGCCAT...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGACCAATGATGAGAGCCTaGATCAAACCCACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARPMMRA*IKPTLR
Trigger: CCTCAGGGTGGGTTTGATTCAGGCTCTCATCATTGG...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAAGTCTCCCAGTCCAGTaGGACCAGGTTCCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQSLPVQ*DQVPVV
Trigger: AACTACAGGAACCTGGTCTCACTGGACTGGGAGACT...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599599.7
CDS-3UTR GCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTACAACAGTGCTGGGCCTaGACGCCGTCTCCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLQQCWA*TPSPRG
Trigger: GCCTCGGGGAGACGGCGTGCAGGCCCAGCACTGTTG...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp ACTCCGTCAATGTGGCCATTATTCCAGCCACCTCAGGGTTCCTCTTGGGGAAACCAGATGGTGACAAGCTaGATCTGGACTCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: TPSMWPLFQPPQGSSWGNQMVTS*IWTPGC
Trigger: ACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTG...GTTTCCCCAAGAGGAACCCTGAGGTGGCTGGAATAATGGCCACATTGACGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACCTGGGGAATTCCCAATaGCTCCCACTCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: ITENHSYGSNDESLNQTHLGNSQ*LPLCTC
Trigger: GCAGGTGCAGAGTGGGAGCCATTGGGAATTCCCCAG...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ACTCCGTCAATGTGGCCATTATTCCAGCCACCTCAGGGTTCCTCTTGGGGAAACATCAAGACTCGCTGCTaGAAACCACCACAATCCCAC +
Preference number: 4 (lower is better)
Translates to: TPSMWPLFQPPQGSSWGNIKTRC*KPPQSH
Trigger: GTGGGATTGTGGTGGTTTCCAGCAGCGAGTCTTGAT...GTTTCCCCAAGAGGAACCCTGAGGTGGCTGGAATAATGGCCACATTGACGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCAGAGGGGGATGGTGGTaGTGCAGCCTCGATCCCATC +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSRGGWW*CSLDPI
Trigger: GATGGGATCGAGGCTGCACCACCACCATCCCCCTCT...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGAAATCTGCCAGAGCCTTaGTCTTGGACTTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARNLPEP*SWTSQH
Trigger: ATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATT...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAAATCTGCCAGAGCCTTaGTCTTGGACTTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQNLPEP*SWTSQH
Trigger: ATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATT...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp GTCCAGGAAACCAAGGCCAGGAGTCAAGTCCTGAGAAATTCAATATGTCCATCTGAATCAAACCCACCCTaGGGCCCACTTGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: VQETKARSQVLRNSICPSESNPP*GPLDCQ
Trigger: CTGGCAGTCAAGTGGGCCTCAGGGTGGGTTTGATTC...AGATGGACATATTGAATTTCTCAGGACTTGACTCCTGGCCTTGGTTTCCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGACCAATGATGAGAGCCTaGATCAAACCCACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRPMMRA*IKPTLR
Trigger: CCTCAGGGTGGGTTTGATTCAGGCTCTCATCATTGG...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACATAGGAAGACAGGCCTaGGGTGACCAACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ITENHSYGSNDESLNQTHIGRQA*GDQQCW
Trigger: CCAGCACTGTTGGTCACCGCAGGCCTGTCTTCCTAT...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp GGACAGATGTATGGGATAGAAGACTTGTTAAAAAGCAGGTTCCTGACCTGCTTGGCCTCTCTGGCCAGCTaGCTGGTTCCCACACTCCTT +
Preference number: 4 (lower is better)
Translates to: GQMYGIEDLLKSRFLTCLASLAS*LVPTLL
Trigger: AAGGAGTGTGGGAACCAGGCAGCTGGCCAGAGAGGC...CAAGCAGGTCAGGAACCTGCTTTTTAACAAGTCTTCTATCCCATACATCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp GTGTGCCCTCAGGAAGCTTACCTTGCCTCACTGAACCTCAGATTCCTTATCTATGAGCGCTCGATGAAGTaGTTCCCACAGGTGTCACAC +
Preference number: 4 (lower is better)
Translates to: VCPQEAYLASLNLRFLIYERSMK*FPQVSH
Trigger: GTGTGACACCTGTGGGAAGCACTTCATCGAGCGCTC...ATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAAGGCCCCAGAGAAAGTaGACTTTGGGGAACACTCTT +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQRPQRK*TLGNTL
Trigger: AAGAGTGTTCCCCAAAGTGCACTTTCTCTGGGGCCT...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCCTGGGGAATTCCCAATaGCTCCCACTCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSLGNSQ*LPLCTC
Trigger: GCAGGTGCAGAGTGGGAGCCATTGGGAATTCCCCAG...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAAAGAGTTTGTTCCCCTaGGGAATTCCCAATGGCTCC +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQKSLFP*GIPNGS
Trigger: GGAGCCATTGGGAATTCCCCAGGGGAACAAACTCTT...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCGCCACGCCTTACGGGTaGACAGGCCCCCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: STLFIRARVAVFLICRMCATPYG*TGPLFC
Trigger: ACAGAAAAGGGGGCCTGTCCACCCGTAAGGCGTGGC...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACTGGATCCGCTCGTGCTaGGTGAGAGAGGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ITENHSYGSNDESLNQTHWIRSC*VREEVF
Trigger: GAAGACTTCCTCTCTCACCCAGCACGAGCGGATCCA...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTAATCTGGCGTCCGTCCTaGGCACCGCCAGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLIWRPS*APPVRA
Trigger: GGCTCTCACTGGCGGTGCCCAGGACGGACGCCAGAT...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGAATCAAGACTCGCTGCTaGAAACCACCACAATCCCAC +
Preference number: 4 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARIKTRC*KPPQSH
Trigger: GTGGGATTGTGGTGGTTTCCAGCAGCGAGTCTTGAT...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
3UTR CAA 72 bp GGGAGAGGCTGCGTCACACAGGGGTTTGTGAGGAGTTaGGCATTTACTCCAAGTGATAAAGGGGTCATTCAG +
Preference number: 4 (lower is better)
Translates to: GRGCVTQGFVRS*AFTPSDKGVIQ
Trigger: CTGAATGACCCCTTTATCACTTGGAGTAAATGCCAAACTCCTCACAAACCCCTGTGTGACGCAGCCTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAAGCTACAGTGAACCTTaGAGTGTCCCCAGATACGTC +
Preference number: 4 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRSYSEP*SVPRYV
Trigger: GACGTATCTGGGGACACTTCAAGGTTCACTGTAGCT...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGAGTCAGAATGGGTTTaGATCCAGCAGCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRESEWV*IQQLCD
Trigger: GTCACACAGCTGCTGGATTCAAACCCATTCTGACTC...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGAGCCTTGGTTGGCAAATaGCTTCAGTTCATGACATGC +
Preference number: 4 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARALVGK*LQFMTC
Trigger: GCATGTCATGAACTGAAGGCATTTGCCAACCAAGGC...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTTGGTGGCTGCCAGCGTaGACTGCAGGGAAACGGTGG +
Preference number: 4 (lower is better)
Translates to: THSKLLIWSVGASLYSHIWWLPA*TAGKRW
Trigger: CCACCGTTTCCCTGCAGTGCACGCTGGCAGCCACCA...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAAGGCCCCAGAGAAAGTaGACTTTGGGGAACACTCTT +
Preference number: 4 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRRPQRK*TLGNTL
Trigger: AAGAGTGTTCCCCAAAGTGCACTTTCTCTGGGGCCT...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCCCTCGATCCCATCTCTaGTTCACACACTGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSPRSHL*FTHWGV
Trigger: GACTCCCCAGTGTGTGAAGCAGAGATGGGATCGAGG...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATGACCTGCTTGATCCCTaGCAAACCCACATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: THGENADGDKLHLDSRMYDLLDP*QTHIFR
Trigger: CCTGAAAATGTGGGTTTGGCAGGGATCAAGCAGGTC...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp CTGACATGGGTGACATCCACATCTATAAAGTGTCTTCTCAGCACCACCGGGACTAAGAGTTTGTTCCCCTaGGGAATTCCCAATGGCTCC +
Preference number: 4 (lower is better)
Translates to: LTWVTSTSIKCLLSTTGTKSLFP*GIPNGS
Trigger: GGAGCCATTGGGAATTCCCCAGGGGAACAAACTCTT...AGTCCCGGTGGTGCTGAGAAGACACTTTATAGATGTGGATGTCACCCATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTGTCGTCCAGCCGTGGTaGGACCAGGACACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: THSKLLIWSVGASLYSHIVVQPW*DQDTAL
Trigger: CAAGGCTGTGTCCTGGTCCCACCACGGCTGGACGAC...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGGGAGTGTGGAACAACTaGAAATGCCAGAACATTAGC +
Preference number: 4 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQGVWNN*KCQNIS
Trigger: GCTAATGTTCTGGCATTTCCAGTTGTTCCACACTCC...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACCTCTGCTTCACACACTaGGGAGTCCAGGAAACCAAG +
Preference number: 4 (lower is better)
Translates to: ITENHSYGSNDESLNQTHLCFTH*GVQETK
Trigger: CTTGGTTTCCTGGACTCCCCAGTGTGTGAAGCAGAG...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTAGGGACGAGCGCTCGATaGAGTGCTTCCCACAGGTGT +
Preference number: 4 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLGTSAR*SASHRC
Trigger: ACACCTGTGGGAAGCACTTCATCGAGCGCTCGTCCC...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCAGGTCAGGGCCCTTGTaGCTGGGATTAGCACCCTTA +
Preference number: 4 (lower is better)
Translates to: STLFIRARVAVFLICRMCRSGPL*LGLAPL
Trigger: TAAGGGTGCTAATCCCAGTCACAAGGGCCCTGACCT...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp GCATTTACTCCAAGTGATAAAGGGGTCATTCAGACCCCACCCAGCACCCATGACCTTACCTTGCCTCACTaGACCTCAGATTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: AFTPSDKGVIQTPPSTHDLTLPH*TSDSLS
Trigger: AGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAG...GTCATGGGTGCTGGGTGGGGTCTGAATGACCCCTTTATCACTTGGAGTAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCGCTTCAGTAAGTACCTaGCTGAGGAACTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSASVST*LRNWWV
Trigger: CACCCACCAGTTCCTCAGTCAGGTACTTACTGAAGC...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp CTGACATGGGTGACATCCACATCTATAAAGTGTCTTCTCAGCACCACCGGGACTTCACACAGGGGTTTGTaGGGAGTTTGGCATTTACTC +
Preference number: 4 (lower is better)
Translates to: LTWVTSTSIKCLLSTTGTSHRGL*GVWHLL
Trigger: GAGTAAATGCCAAACTCCTCACAAACCCCTGTGTGA...AGTCCCGGTGGTGCTGAGAAGACACTTTATAGATGTGGATGTCACCCATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp GCATTTACTCCAAGTGATAAAGGGGTCATTCAGACCCCACCCAGCACCCATGACATCAGACACCAAATCTaGCAGAGCCTTGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: AFTPSDKGVIQTPPSTHDIRHQI*QSLDLG
Trigger: TCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGAT...GTCATGGGTGCTGGGTGGGGTCTGAATGACCCCTTTATCACTTGGAGTAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGACACTTCCATGTTGTGTaGCCTCAGGAAGCTTACCTT +
Preference number: 4 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRHFHVV*PQEAYL
Trigger: AAGGTAAGCTTCCTGAGGGCACACAACATGGAAGTG...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCTGTTACCAGCGGCCATaGCTCAGCTACAGTGAACCT +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSCYQRP*LSYSEP
Trigger: AGGTTCACTGTAGCTGAGCCATGGCCGCTGGTAACA...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTCCTCTTGGGGAAACGTaGAGCCCTGAGTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: THSKLLIWSVGASLYSHIPLGET*SPEWGA
Trigger: AGCTCCCCACTCAGGGCTCCACGTTTCCCCAAGAGG...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAACCCCAAATAGTGCCTTaGACAGATGTATGGGATAGA +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQPQIVP*TDVWDR
Trigger: TCTATCCCATACATCTGTCCAAGGCACTATTTGGGG...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp GGACAGATGTATGGGATAGAAGACTTGTTAAAAAGCAGGTTCCTGACCTGCTTGAATGCCTTCAGTTCATaGCATGCGGGTACTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GQMYGIEDLLKSRFLTCLNAFSS*HAGTEP
Trigger: GGGCTCAGTACCCGCATGTCATGAACTGAAGGCATT...CAAGCAGGTCAGGAACCTGCTTTTTAACAAGTCTTCTATCCCATACATCTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp GGACAGATGTATGGGATAGAAGACTTGTTAAAAAGCAGGTTCCTGACCTGCTTGATGGCTCAGCTACAGTaGACCTTGAAGTGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GQMYGIEDLLKSRFLTCLMAQLQ*TLKCPQ
Trigger: CTGGGGACACTTCAAGGTTCACTGTAGCTGAGCCAT...CAAGCAGGTCAGGAACCTGCTTTTTAACAAGTCTTCTATCCCATACATCTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACACTCCAGGATGTATCTaGCAAAGAGGGAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: ITENHSYGSNDESLNQTHTPGCI*QRGRCL
Trigger: GAGACATCTCCCTCTTTGTCAGATACATCCTGGAGT...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp CAATCCCACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGACACAAGCACTACCTATaGAGAACATACCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: QSHVGSQPEDDVKKYEGRHKHYL*RTYPIR
Trigger: TCTGATGGGGTATGTTCTTCATAGGTAGTGCTTGTG...TCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTGGGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp GTGTGCCCTCAGGAAGCTTACCTTGCCTCACTGAACCTCAGATTCCTTATCTATACCCTGAGGCCCACTTaGCTGCCAGAATTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: VCPQEAYLASLNLRFLIYTLRPT*LPEFEK
Trigger: TTTTTCAAATTCTGGCAGTCAAGTGGGCCTCAGGGT...ATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp GCATTTACTCCAAGTGATAAAGGGGTCATTCAGACCCCACCCAGCACCCATGACCTTGTGAGGGTTAAATaGGCCATTTCATCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: AFTPSDKGVIQTPPSTHDLVRVK*AISSLQ
Trigger: TTGGAGAGATGAAATGGCTCATTTAACCCTCACAAG...GTCATGGGTGCTGGGTGGGGTCTGAATGACCCCTTTATCACTTGGAGTAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCTCAGAGTTGGACAAGTaGCTCCGTCAATGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSSELDK*LRQCGH
Trigger: ATGGCCACATTGACGGAGTCACTTGTCCAACTCTGA...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTAGTGTGGATCCGCTCGTaGTGGGTGAGAGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLVWIRS*WVREEV
Trigger: GACTTCCTCTCTCACCCAGCACGAGCGGATCCACAC...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp CACGTGGGAAGCCAGCCTGAGGATGATGTTAAGAAGTATGAAGGGAGAGCCAGATGGAACAACTGGAAATaGCAGAACATTAGCAACCAG +
Preference number: 4 (lower is better)
Translates to: HVGSQPEDDVKKYEGRARWNNWK*QNISNQ
Trigger: CTGGTTGCTAATGTTCTGGCATTTCCAGTTGTTCCA...TCTGGCTCTCCCTTCATACTTCTTAACATCATCCTCAGGCTGGCTTCCCACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp GCATTTACTCCAAGTGATAAAGGGGTCATTCAGACCCCACCCAGCACCCATGACACTGATATGGTCTGTTaGTGCTTCCCTGTATTCACA +
Preference number: 4 (lower is better)
Translates to: AFTPSDKGVIQTPPSTHDTDMVC*CFPVFT
Trigger: TGTGAATACAGGGAAGCACCAACAGACCATATCAGT...GTCATGGGTGCTGGGTGGGGTCTGAATGACCCCTTTATCACTTGGAGTAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCGTGACTCCGTCAATGTaGCCATTATTCCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSVTPSM*PLFQPP
Trigger: AGGTGGCTGGAATAATGGCCACATTGACGGAGTCAC...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp TGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAAGTCCTGAGAAATTCAATATGTCACAAGCACTACCTATaGAGAACATACCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: WGVQETKARSQVLRNSICHKHYL*RTYPIR
Trigger: TCTGATGGGGTATGTTCTTCATAGGTAGTGCTTGTG...ACATATTGAATTTCTCAGGACTTGACTCCTGGCCTTGGTTTCCTGGACTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTAGAGCGCTCGATGAAGTaGTTCCCACAGGTGTCACAC +
Preference number: 4 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLERSMK*FPQVSH
Trigger: GTGTGACACCTGTGGGAAGCACTTCATCGAGCGCTC...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTACAACCGGCAAACTCCTaGCACTTCCTAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLQPANS*HFLAWW
Trigger: CCACCAAGCTAGGAAGTGGCAGGAGTTTGCCGGTTG...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp CCCATCAGACACCAAATCTGCCAGAGCCTTGATCTTGGACTTCCCAGCATCCAGTCTGAATATCAAACCTaGTGCTGTTTCTTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PIRHQICQSLDLGLPSIQSEYQT*CCFFSF
Trigger: GAAGGAAAAGAAACAGCAGCAGGTTTGATATTCAGA...CTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCGGACACAGCCTTGGTTaGCAAATGCCTTCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSGHSLG*QMPSVH
Trigger: ATGAACTGAAGGCATTTGCCAACCAAGGCTGTGTCC...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCTCAAGAGGGCTAGTCTaGAACCCTGATGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSSRGLV*NPDVCY
Trigger: GTAACAGACATCAGGGTTCCAGACTAGCCCTCTTGA...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTAAAGAGGGAGGACCTTTaGGAGGTCATGAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLKREDL*EVMRSG
Trigger: CCCTGACCTCATGACCTCCCAAAGGTCCTCCCTCTT...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAATTATACGTGCCCGAGTaGCTGTTTTTCTTATTTGCA +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQLYVPE*LFFLFA
Trigger: TGCAAATAAGAAAAACAGCCACTCGGGCACGTATAA...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTGCGCCCCCTCAGAGTTaGACAAGTGACTCCGTCAAT +
Preference number: 4 (lower is better)
Translates to: THSKLLIWSVGASLYSHIAPPQS*TSDSVN
Trigger: ATTGACGGAGTCACTTGTCCAACTCTGAGGGGGCGC...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTAATGCCTTCAGTTCATaGCATGCGGGTACTGAGCCC +
Preference number: 4 (lower is better)
Translates to: THSKLLIWSVGASLYSHINAFSS*HAGTEP
Trigger: GGGCTCAGTACCCGCATGTCATGAACTGAAGGCATT...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCACTCCAGGATGTATCTaGCAAAGAGGGAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: STLFIRARVAVFLICRMCTPGCI*QRGRCL
Trigger: GAGACATCTCCCTCTTTGTCAGATACATCCTGGAGT...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAATCTGAATATCAAACCTaGTGCTGTTTCTTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLAPPTITEADFDQTTGQSEYQT*CCFFSF
Trigger: GAAGGAAAAGAAACAGCAGCAGGTTTGATATTCAGA...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp GGACAGATGTATGGGATAGAAGACTTGTTAAAAAGCAGGTTCCTGACCTGCTTGGGACACAGCCTTGGTTaGCAAATGCCTTCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: GQMYGIEDLLKSRFLTCLGHSLG*QMPSVH
Trigger: ATGAACTGAAGGCATTTGCCAACCAAGGCTGTGTCC...CAAGCAGGTCAGGAACCTGCTTTTTAACAAGTCTTCTATCCCATACATCTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR TCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCTTGACTGCCAGAATTTaGAAAACGGTCCACCTTGTT +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSLTARI*KTVHLV
Trigger: AACAAGGTGGACCGTTTTTCAAATTCTGGCAGTCAA...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp GTCCAGGAAACCAAGGCCAGGAGTCAAGTCCTGAGAAATTCAATATGTCCATCTCCAGGAGTCAAGTCCTaGGAAATTCAATATGTCCAT +
Preference number: 4 (lower is better)
Translates to: VQETKARSQVLRNSICPSPGVKS*EIQYVH
Trigger: ATGGACATATTGAATTTCTCAGGACTTGACTCCTGG...AGATGGACATATTGAATTTCTCAGGACTTGACTCCTGGCCTTGGTTTCCTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTACAGATGGTGACAAGCTaGATCTGGACTCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLQMVTS*IWTPGC
Trigger: ACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTG...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCTTGACTGCCAGAATTTaGAAAACGGTCCACCTTGTT +
Preference number: 4 (lower is better)
Translates to: STLFIRARVAVFLICRMCLTARI*KTVHLV
Trigger: AACAAGGTGGACCGTTTTTCAAATTCTGGCAGTCAA...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTACCCTGAGGCCCACTTaGCTGCCAGAATTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: THSKLLIWSVGASLYSHITLRPT*LPEFEK
Trigger: TTTTTCAAATTCTGGCAGTCAAGTGGGCCTCAGGGT...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCAGAGAAAGTGCACTTTaGGGAACACTCTTATGTGTA +
Preference number: 4 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSRESAL*GTLLCV
Trigger: TACACATAAGAGTGTTCCCCAAAGTGCACTTTCTCT...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTATCAGACACCAAATCTaGCAGAGCCTTGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: THSKLLIWSVGASLYSHIIRHQI*QSLDLG
Trigger: TCCAAGATCAAGGCTCTGGCAGATTTGGTGTCTGAT...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACGCTGTTTTTCTTATTTaGAGAATGTGCTTGCTGATA +
Preference number: 4 (lower is better)
Translates to: ITENHSYGSNDESLNQTHAVFLI*RMCLLI
Trigger: TATCAGCAAGCACATTCTGCAAATAAGAAAAACAGC...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp TGGGGAGTCCAGGAAACCAAGGCCAGGAGTCAAGTCCTGAGAAATTCAATATGTCTCCATTCTCTGCAGTaGATACATATTCTCATTTAT +
Preference number: 4 (lower is better)
Translates to: WGVQETKARSQVLRNSICLHSLQ*IHILIY
Trigger: ATAAATGAGAATATGTATGCACTGCAGAGAATGGAG...ACATATTGAATTTCTCAGGACTTGACTCCTGGCCTTGGTTTCCTGGACTCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR GCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATGGAACAACTGGAAATaGCAGAACATTAGCAACCAG +
Preference number: 4 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLWNNWK*QNISNQ
Trigger: CTGGTTGCTAATGTTCTGGCATTTCCAGTTGTTCCA...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR TCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTACAGCATCCAGAACCATaGGTGACAAATTTCTATTGT +
Preference number: 4 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLQHPEP*VTNFYC
Trigger: ACAATAGAAATTTGTCACTCATGGTTCTGGATGCTG...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR GCA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCGCTGTTTTTCTTATTTaGAGAATGTGCTTGCTGATA +
Preference number: 4 (lower is better)
Translates to: STLFIRARVAVFLICRMCAVFLI*RMCLLI
Trigger: TATCAGCAAGCACATTCTGCAAATAAGAAAAACAGC...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CCA 90 bp AATTTGAAAAACGGTCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTAAGAGAAAGTGCACTTTaGGGAACACTCTTATGTGTA +
Preference number: 4 (lower is better)
Translates to: NLKNGPPCLYVPEWLFFLRESAL*GTLLCV
Trigger: TACACATAAGAGTGTTCCCCAAAGTGCACTTTCTCT...TAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGACCGTTTTTCAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp GCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTGGTCTTCCGGAAGGCCTaGCCACACACGTCGCACACA +
Preference number: 5 (lower is better)
Translates to: ALLTKRAAIWRPSWAPPVVFRKA*PHTSHT
Trigger: TGTGTGCGACGTGTGTGGCAAGGCCTTCCGGAAGAC...CACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp GCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTGGTGCTGGAGAAGTTCTaGCCACGCCTTACGGGTGGA +
Preference number: 5 (lower is better)
Translates to: ALLTKRAAIWRPSWAPPVVLEKF*PRLTGG
Trigger: TCCACCCGTAAGGCGTGGCAAGAACTTCTCCAGCAC...CACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS TCA 90 bp CCTCATCAGTCAGCAGCTGAGCAGCCATCCCTCTGCTGCCCACGGTaGATAGGAAGACAGGCCTGCGGTGACCAACAGTGCTGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: PHQSAAEQPSLCCPR*IGRQACGDQQCWAC
Trigger: GCAGGCCCAGCACTGTTGGTCACCGCAGGCCTGTCTTCCTATTCACCGTGGGCAGCAGAGGGATGGCTGCTCAGCTGCTGACTGATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328070.10
ENST00000594944.1
ENST00000599599.7
CDS CCA 90 bp AGAAGTTCTTGCCACGCCTTACGGGTGGACAGGCCCCCTTTTCTGTaGGGTCGTCCAGCCGTGGTGGGACCAGGACACAGCCTTGGTTGG +
Preference number: 5 (lower is better)
Translates to: RSSCHALRVDRPPFL*GRPAVVGPGHSLGW
Trigger: CCAACCAAGGCTGTGTCCTGGTCCCACCACGGCTGGACGACCCCACAGAAAAGGGGGCCTGTCCACCCGTAAGGCGTGGCAAGAACTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp GACCTCGGAGCCCAGGTGGACCCCAGCTCACACCCTGTCCCCTCCACTTCCATGGACCAGGACACAGCCTaGGTTGGCAAATGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: DLGAQVDPSSHPVPSTSMDQDTA*VGKCLQ
Trigger: CTGAAGGCATTTGCCAACCAAGGCTGTGTCCTGGTC...CATGGAAGTGGAGGGGACAGGGTGTGAGCTGGGGTCCACCTGGGCTCCGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CAA 90 bp GACCTCGGAGCCCAGGTGGACCCCAGCTCACACCCTGTCCCCTCCACTTCCATGAGGTTCCTGACCTGCTaGATCCCTGCCAAACCCACA +
Preference number: 5 (lower is better)
Translates to: DLGAQVDPSSHPVPSTSMRFLTC*IPAKPT
Trigger: TGTGGGTTTGGCAGGGATCAAGCAGGTCAGGAACCT...CATGGAAGTGGAGGGGACAGGGTGTGAGCTGGGGTCCACCTGGGCTCCGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CAA 90 bp GCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTGGAAAAACGGTCCACCTaGTTTATACGTGCCCGAGTG +
Preference number: 5 (lower is better)
Translates to: ALLTKRAAIWRPSWAPPVEKRST*FIRARV
Trigger: CACTCGGGCACGTATAAACAAGGTGGACCGTTTTTC...CACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS CCA 90 bp CTGTGGGGTCGTCCAGCCGTGGTGGGACCAGGACACAGCCTTGGTTaGCAAATGCCTTCAGTTCATGACATGCGGGTACTGAGCCCCCTA +
Preference number: 5 (lower is better)
Translates to: LWGRPAVVGPGHSLG*QMPSVHDMRVLSPL
Trigger: TAGGGGGCTCAGTACCCGCATGTCATGAACTGAAGGCATTTGCCAACCAAGGCTGTGTCCTGGTCCCACCACGGCTGGACGACCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp GTAGTCCAGTGTAGGCAAGGAGCACGGACCTCGGAGCCCAGGTGGACCCCAGCTTCACTGAAGCCGATTTaGACCAGACAACTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: VVQCRQGARTSEPRWTPASLKPI*TRQLAK
Trigger: TTTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGA...AGCTGGGGTCCACCTGGGCTCCGAGGTCCGTGCTCCTTGCCTACACTGGACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS TCA 90 bp ACAATGTGGTTCGTCCACACGACAGCTCTGACACACGCTGCAACATaGAGGAACCAGTGCCTCATCAGTCAGCAGCTGAGCAGCCATCCC +
Preference number: 5 (lower is better)
Translates to: TMWFVHTTALTHAAT*RNQCLISQQLSSHP
Trigger: GGGATGGCTGCTCAGCTGCTGACTGATGAGGCACTGGTTCCTTCATGTTGCAGCGTGTGTCAGAGCTGTCGTGTGGACGAACCACATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594944.1
CDS-3UTR CAA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAGTCTTCCGGAAGGCCTaGCCACACACGTCGCACACA +
Preference number: 5 (lower is better)
Translates to: LLAPPTITEADFDQTTGQVFRKA*PHTSHT
Trigger: TGTGTGCGACGTGTGTGGCAAGGCCTTCCGGAAGAC...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATCGCGTCAGGTTCGTGTaGCGGCTGAAGGTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: THGENADGDKLHLDSRMYRVRFV*RLKVFP
Trigger: CGGGAAGACCTTCAGCCGCAACACGAACCTGACGCG...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATCTGCCACTTCCTAGCTaGGTGGCTGCCAGCGTGCAC +
Preference number: 5 (lower is better)
Translates to: THGENADGDKLHLDSRMYLPLPS*VAASVH
Trigger: GTGCACGCTGGCAGCCACCAAGCTAGGAAGTGGCAG...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp GCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTGTTCTGTATTATTTATTaGTGTACACCAGTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: ALLTKRAAIWRPSWAPPVFCIIY*CTPVSG
Trigger: CCCTGACACTGGTGTACACAAATAAATAATACAGAA...CACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp AGCACTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTGGGCACCGCCAGTCCGAAATGTCATTCTTaGGATCCAACTCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: STADKARSHLASVLGTASPKCHS*DPTLSF
Trigger: AAATGAAAGAGTTGGATCCAAAGAATGACATTTCGG...ACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp GTAGTCCAGTGTAGGCAAGGAGCACGGACCTCGGAGCCCAGGTGGACCCCAGCTCCGAAATGTCATTCTTaGGATCCAACTCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: VVQCRQGARTSEPRWTPAPKCHS*DPTLSF
Trigger: AAATGAAAGAGTTGGATCCAAAGAATGACATTTCGG...AGCTGGGGTCCACCTGGGCTCCGAGGTCCGTGCTCCTTGCCTACACTGGACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CAA 90 bp CTTCTTGCCCCTCCCACAATCACTGAAGCCGATTTTGACCAGACAACTGGCCAAGCCAGAGCCTTGATCTaGGACTTCCCAGCATCCAGA +
Preference number: 5 (lower is better)
Translates to: LLAPPTITEADFDQTTGQARALI*DFPASR
Trigger: TCTGGATGCTGGGAAGTCCAAGATCAAGGCTCTGGC...TTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGATTGTGGGAGGGGCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp GCATTTACTCCAAGTGATAAAGGGGTCATTCAGACCCCACCCAGCACCCATGACCCCTCCACTTCCATGTaGTGTGCCCTCAGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: AFTPSDKGVIQTPPSTHDPSTSM*CALRKL
Trigger: AAGCTTCCTGAGGGCACACAACATGGAAGTGGAGGG...GTCATGGGTGCTGGGTGGGGTCTGAATGACCCCTTTATCACTTGGAGTAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CAA 90 bp GTGTGCCCTCAGGAAGCTTACCTTGCCTCACTGAACCTCAGATTCCTTATCTATACCTCAGGGTTCCTCTaGGGGAAACGTGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: VCPQEAYLASLNLRFLIYTSGFL*GKRGAL
Trigger: CAGGGCTCCACGTTTCCCCAAGAGGAACCCTGAGGT...ATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS GCA 90 bp TGGATAAACAATGTGGTTCGTCCACACGACAGCTCTGACACACGCTaGAACATGAAGGAACCAGTGCCTCATCAGTCAGCAGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: WINNVVRPHDSSDTR*NMKEPVPHQSAAEQ
Trigger: CTGCTCAGCTGCTGACTGATGAGGCACTGGTTCCTTCATGTTGCAGCGTGTGTCAGAGCTGTCGTGTGGACGAACCACATTGTTTATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594944.1
CDS-3UTR CAA 90 bp ACCCACGGAGAAAATGCAGATGGTGACAAGCTGCATCTGGACTCCAGGATGTATGACCAGGACACAGCCTaGGTTGGCAAATGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: THGENADGDKLHLDSRMYDQDTA*VGKCLQ
Trigger: CTGAAGGCATTTGCCAACCAAGGCTGTGTCCTGGTC...ATACATCCTGGAGTCCAGATGCAGCTTGTCACCATCTGCATTTTCTCCGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp TCCACCTTGTTTATACGTGCCCGAGTGGCTGTTTTTCTTATTTGCAGAATGTGCCGCGTCAGGTTCGTGTaGCGGCTGAAGGTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: STLFIRARVAVFLICRMCRVRFV*RLKVFP
Trigger: CGGGAAGACCTTCAGCCGCAACACGAACCTGACGCG...GCACATTCTGCAAATAAGAAAAACAGCCACTCGGGCACGTATAAACAAGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp GTGTGCCCTCAGGAAGCTTACCTTGCCTCACTGAACCTCAGATTCCTTATCTATGAAGAGGGAGGACCTTaGGGAGGTCATGAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: VCPQEAYLASLNLRFLIYEEGGP*GGHEVR
Trigger: CCTGACCTCATGACCTCCCAAAGGTCCTCCCTCTTC...ATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CAA 90 bp GTGTGCCCTCAGGAAGCTTACCTTGCCTCACTGAACCTCAGATTCCTTATCTATAGGACACAGCCTTGGTaGGCAAATGCCTTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: VCPQEAYLASLNLRFLIYRTQPW*ANAFSS
Trigger: TGAACTGAAGGCATTTGCCAACCAAGGCTGTGTCCT...ATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CAA 90 bp GTGTGCCCTCAGGAAGCTTACCTTGCCTCACTGAACCTCAGATTCCTTATCTATCCAACAACGGAGAGCTaGTCTTCCGAAATGTCATTC +
Preference number: 5 (lower is better)
Translates to: VCPQEAYLASLNLRFLIYPTTES*SSEMSF
Trigger: GAATGACATTTCGGAAGACAAGCTCTCCGTTGTTGG...ATAGATAAGGAATCTGAGGTTCAGTGAGGCAAGGTAAGCTTCCTGAGGGCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CAA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTGTGCTGGAGAAGTTCTaGCCACGCCTTACGGGTGGA +
Preference number: 5 (lower is better)
Translates to: THSKLLIWSVGASLYSHIVLEKF*PRLTGG
Trigger: TCCACCCGTAAGGCGTGGCAAGAACTTCTCCAGCAC...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp ATGCAACTAAAGCAATGTCTGATCAAGACTCGCTGCTGGAAACCACCACAATCCCCAACAACGGAGAGCTaGTCTTCCGAAATGTCATTC +
Preference number: 5 (lower is better)
Translates to: MQLKQCLIKTRCWKPPQSPTTES*SSEMSF
Trigger: GAATGACATTTCGGAAGACAAGCTCTCCGTTGTTGG...GGATTGTGGTGGTTTCCAGCAGCGAGTCTTGATCAGACATTGCTTTAGTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp GGACAGATGTATGGGATAGAAGACTTGTTAAAAAGCAGGTTCCTGACCTGCTTGGAAAAACGGTCCACCTaGTTTATACGTGCCCGAGTG +
Preference number: 5 (lower is better)
Translates to: GQMYGIEDLLKSRFLTCLEKRST*FIRARV
Trigger: CACTCGGGCACGTATAAACAAGGTGGACCGTTTTTC...CAAGCAGGTCAGGAACCTGCTTTTTAACAAGTCTTCTATCCCATACATCTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328070.10
CDS-3UTR CAA 90 bp ATCACAGAGAACCACAGCTATGGCTCCAATGATGAGAGCCTGAATCAAACCCACCTTGACTGCCAGAATTaGAAAAACGGTCCACCTTGT +
Preference number: 5 (lower is better)
Translates to: ITENHSYGSNDESLNQTHLDCQN*KNGPPC
Trigger: ACAAGGTGGACCGTTTTTCAAATTCTGGCAGTCAAG...GTGGGTTTGATTCAGGCTCTCATCATTGGAGCCATAGCTGTGGTTCTCTGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTTCACTGAAGCCGATTTaGACCAGACAACTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: THSKLLIWSVGASLYSHISLKPI*TRQLAK
Trigger: TTTGGCCAGTTGTCTGGTCAAAATCGGCTTCAGTGA...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTAGGGACTTAAGACAGTaGCCTTCACATTTAGCTGCA +
Preference number: 5 (lower is better)
Translates to: THSKLLIWSVGASLYSHIRDLRQ*PSHLAA
Trigger: TGCAGCTAAATGTGAAGGCAACTGTCTTAAGTCCCT...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS-3UTR CAA 90 bp ACTCACTCGAAGTTACTGATATGGTCTGTTGGTGCTTCCCTGTATTCACATATTCAGAGAAAGTGCACTTaGGGGAACACTCTTATGTGT +
Preference number: 5 (lower is better)
Translates to: THSKLLIWSVGASLYSHIQRKCT*GNTLMC
Trigger: ACACATAAGAGTGTTCCCCAAAGTGCACTTTCTCTG...AATATGTGAATACAGGGAAGCACCAACAGACCATATCAGTAACTTCGAGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS TCA 90 bp AAAATGGTTCAGCTGCTTTGGAAGACAGTCTGGCATTTCCTCAAGTaGATAAACACAGAGTTACCTTATGACCTAGCACTTCCATTCTTG +
Preference number: 5 (lower is better)
Translates to: KMVQLLWKTVWHFLK*INTELPYDLALPFL
Trigger: CAAGAATGGAAGTGCTAGGTCATAAGGTAACTCTGTGTTTATTCACTTGAGGAAATGCCAGACTGTCTTCCAAAGCAGCTGAACCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594944.1
CDS CCA 72 bp CTGCTGACAAAGCGCGCAGCCATCTGGCGTCCGTCCTaGGCACCGCCAGTGAGAGCCCTGCACAGAGGCGCT +
Preference number: 6 (lower is better)
Translates to: LLTKRAAIWRPS*APPVRALHRGA
Trigger: AGCGCCTCTGTGCAGGGCTCTCACTGGCGGTGCCCAGGACGGACGCCAGATGGCTGCGCGCTTTGTCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS TCA 72 bp CTGCTGCCCACGGTGAATAGGAAGACAGGCCTGCGGTaGCCAACAGTGCTGGGCCTGCACGCCGTCTCCCCG +
Preference number: 6 (lower is better)
Translates to: LLPTVNRKTGLR*PTVLGLHAVSP
Trigger: CGGGGAGACGGCGTGCAGGCCCAGCACTGTTGGTCACCGCAGGCCTGTCTTCCTATTCACCGTGGGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328070.10
ENST00000594944.1
ENST00000599599.7
CDS TCA 72 bp CCGCCAGTGAGAGCCCTGCACAGAGGCGCTCAGGTGTaGATCCGCAGGTGGCGCGTCAGGTTCGTGTTGCGG +
Preference number: 6 (lower is better)
Translates to: PPVRALHRGAQV*IRRWRVRFVLR
Trigger: CCGCAACACGAACCTGACGCGCCACCTGCGGATTCACACCTGAGCGCCTCTGTGCAGGGCTCTCACTGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS TCA 72 bp CCTCTCTGGCCAGCTGCCTGGTTCCCACACTCCTTCTaGGCCAGGACCCCTGGCACCATTCCTCGTGGGTCC +
Preference number: 6 (lower is better)
Translates to: PLWPAAWFPHSF*ARTPGTIPRGS
Trigger: GGACCCACGAGGAATGGTGCCAGGGGTCCTGGCTCAGAAGGAGTGTGGGAACCAGGCAGCTGGCCAGAGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS TCA 72 bp TCAGCAGCTGAGCAGCCATCCCTCTGCTGCCCACGGTaGATAGGAAGACAGGCCTGCGGTGACCAACAGTGC +
Preference number: 6 (lower is better)
Translates to: SAAEQPSLCCPR*IGRQACGDQQC
Trigger: GCACTGTTGGTCACCGCAGGCCTGTCTTCCTATTCACCGTGGGCAGCAGAGGGATGGCTGCTCAGCTGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328070.10
ENST00000594944.1
ENST00000599599.7
CDS CAA 72 bp GGGGTCGTCCAGCCGTGGTGGGACCAGGACACAGCCTaGGTTGGCAAATGCCTTCAGTTCATGACATGCGGG +
Preference number: 6 (lower is better)
Translates to: GVVQPWWDQDTA*VGKCLQFMTCG
Trigger: CCCGCATGTCATGAACTGAAGGCATTTGCCAACCAAGGCTGTGTCCTGGTCCCACCACGGCTGGACGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS CCA 72 bp CATGCGGGTACTGAGCCCCCTAAGAGTTTGTTCCCCTaGGGAATTCCCAATGGCTCCCACTCTGCACCTGCA +
Preference number: 6 (lower is better)
Translates to: HAGTEPPKSLFP*GIPNGSHSAPA
Trigger: TGCAGGTGCAGAGTGGGAGCCATTGGGAATTCCCCAGGGGAACAAACTCTTAGGGGGCTCAGTACCCGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS CCA 72 bp CGTCCAGCCGTGGTGGGACCAGGACACAGCCTTGGTTaGCAAATGCCTTCAGTTCATGACATGCGGGTACTG +
Preference number: 6 (lower is better)
Translates to: RPAVVGPGHSLG*QMPSVHDMRVL
Trigger: CAGTACCCGCATGTCATGAACTGAAGGCATTTGCCAACCAAGGCTGTGTCCTGGTCCCACCACGGCTGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS GCA 72 bp AATGTGGTTCGTCCACACGACAGCTCTGACACACGCTaGAACATGAAGGAACCAGTGCCTCATCAGTCAGCA +
Preference number: 6 (lower is better)
Translates to: NVVRPHDSSDTR*NMKEPVPHQSA
Trigger: TGCTGACTGATGAGGCACTGGTTCCTTCATGTTGCAGCGTGTGTCAGAGCTGTCGTGTGGACGAACCACATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594944.1
CDS TCA 72 bp AGGACACAGCCTTGGTTGGCAAATGCCTTCAGTTCATaGCATGCGGGTACTGAGCCCCCTAAGAGTTTGTTC +
Preference number: 6 (lower is better)
Translates to: RTQPWLANAFSS*HAGTEPPKSLF
Trigger: GAACAAACTCTTAGGGGGCTCAGTACCCGCATGTCATGAACTGAAGGCATTTGCCAACCAAGGCTGTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328070.10
ENST00000599599.7
CDS GCA 72 bp GAATGCACAGCTGGTGGGGATGTAAAATGGTTCAGCTaGTTTGGAAGACAGTCTGGCATTTCCTCAAGTGAA +
Preference number: 6 (lower is better)
Translates to: ECTAGGDVKWFS*FGRQSGISSSE
Trigger: TTCACTTGAGGAAATGCCAGACTGTCTTCCAAAGCAGCTGAACCATTTTACATCCCCACCAGCTGTGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594944.1
CDS TCA 72 bp AGTCCCAAAGTGGAAACGACTCAAATGTCCATCTCCTaGCGAATGGATAAACAATGTGGTTCGTCCACACGA +
Preference number: 6 (lower is better)
Translates to: SPKVETTQMSIS*RMDKQCGSSTR
Trigger: TCGTGTGGACGAACCACATTGTTTATCCATTCGTCAGGAGATGGACATTTGAGTCGTTTCCACTTTGGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594944.1
CDS TCA 72 bp ATGGCCATCAGTAGGGGTTTGGATAAATCAGGTCAGTaGATCCACCACAGTGGAATACACACAGCCATAACA +
Preference number: 6 (lower is better)
Translates to: MAISRGLDKSGQ*IHHSGIHTAIT
Trigger: TGTTATGGCTGTGTGTATTCCACTGTGGTGGATTCACTGACCTGATTTATCCAAACCCCTACTGATGGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594944.1
CDS CCA 72 bp AGTGAATGCAAGAAACTGGTAAGAATGCACAGCTGGTaGGGATGTAAAATGGTTCAGCTGCTTTGGAAGACA +
Preference number: 6 (lower is better)
Translates to: SECKKLVRMHSW*GCKMVQLLWKT
Trigger: TGTCTTCCAAAGCAGCTGAACCATTTTACATCCCCACCAGCTGTGCATTCTTACCAGTTTCTTGCATTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594944.1
CDS TCA 72 bp CAGCTGCTTTGGAAGACAGTCTGGCATTTCCTCAAGTaGATAAACACAGAGTTACCTTATGACCTAGCACTT +
Preference number: 6 (lower is better)
Translates to: QLLWKTVWHFLK*INTELPYDLAL
Trigger: AAGTGCTAGGTCATAAGGTAACTCTGTGTTTATTCACTTGAGGAAATGCCAGACTGTCTTCCAAAGCAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594944.1