Pregenerated sensors for ZNF706 (Homo sapiens)
Ensembl gene IDs: ENSG00000120963Ensembl transcript IDs: ENST00000311212.9, ENST00000518071.5, ENST00000518336.5, ENST00000519744.5, ENST00000520347.5, ENST00000520454.1, ENST00000520498.1, ENST00000520984.5, ENST00000523146.1, ENST00000523922.1
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTTCACAGGGCACGCTTCGGCCCTTGCTAGGAGTCCATCGTTCTaGCATAACATTTGCTCCCAGGTCATCTGCTTGCAAGAGGCAATC | + |
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Preference number: 1 (lower is better) Translates to: VFTGHASALARSPSF*HNICSQVICLQEAI Trigger: GATTGCCTCTTGCAAGCAGATGACCTGGGAGCAAATGTTATGGCAGAACGATGGACTCCTAGCAAGGGCCGAAGCGTGCCCTGTGAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
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| 3UTR GCA 90 bp | CACGCTTCGGCCCTTGCTAGGAGTCCATCGTTCTGCCATAACATTTaGTCCCAGGTCATCTGCTTGCAAGAGGCAATCGAGAGTTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: HASALARSPSFCHNI*SQVICLQEAIESLG Trigger: TCCCAAACTCTCGATTGCCTCTTGCAAGCAGATGACCTGGGAGCAAATGTTATGGCAGAACGATGGACTCCTAGCAAGGGCCGAAGCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
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| 3UTR GCA 90 bp | GCTAGGAGTCCATCGTTCTGCCATAACATTTGCTCCCAGGTCATCTaGTTGCAAGAGGCAATCGAGAGTTTGGGAAACCCTGTAAACAAC | + |
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Preference number: 1 (lower is better) Translates to: ARSPSFCHNICSQVI*LQEAIESLGNPVNN Trigger: GTTGTTTACAGGGTTTCCCAAACTCTCGATTGCCTCTTGCAAGCAGATGACCTGGGAGCAAATGTTATGGCAGAACGATGGACTCCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR CCA 90 bp | CCTCTTCGTGCAGGCTTCTGGCTTTCTGTGCACTTTCAGACATTTTaGACATATAATGCTCCTCTGCTATCTGTTCTCTCAGGGCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: PLRAGFWLSVHFQTF*TYNAPLLSVLSGLP Trigger: TGGAAGCCCTGAGAGAACAGATAGCAGAGGAGCATTATATGTCCAAAATGTCTGAAAGTGCACAGAAAGCCAGAAGCCTGCACGAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR GCA 90 bp | GGCTTTCTGTGCACTTTCAGACATTTTGGACATATAATGCTCCTCTaGTATCTGTTCTCTCAGGGCTTCCATATTCTAGTCCTGAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: GFLCTFRHFGHIMLL*YLFSQGFHILVLSP Trigger: AGGGCTCAGGACTAGAATATGGAAGCCCTGAGAGAACAGATAGCAGAGGAGCATTATATGTCCAAAATGTCTGAAAGTGCACAGAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR TCA 90 bp | CCTCTTAAACTGCAGTTTAAGGTCTTGATGAGGTTACCAAATCTCTaGCAAGCATATATTCTTTCCAGTCTTCACAGGGCACGCTTCGGC | + |
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Preference number: 1 (lower is better) Translates to: PLKLQFKVLMRLPNL*QAYILSSLHRARFG Trigger: GCCGAAGCGTGCCCTGTGAAGACTGGAAAGAATATATGCTTGTCAGAGATTTGGTAACCTCATCAAGACCTTAAACTGCAGTTTAAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
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| 3UTR TCA 90 bp | TATTCTAGTCCTGAGCCCTGTGTTTCAGGGGTATCTAGGAAATCTTaGTTTCTTTCAGGTGTTAACATCTCAAGTTCCTTTGCTTCATAT | + |
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Preference number: 1 (lower is better) Translates to: YSSPEPCVSGVSRKS*FLSGVNISSSFASY Trigger: ATATGAAGCAAAGGAACTTGAGATGTTAACACCTGAAAGAAATCAAGATTTCCTAGATACCCCTGAAACACAGGGCTCAGGACTAGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR CAA 90 bp | ACAAGCATATATTCTTTCCAGTCTTCACAGGGCACGCTTCGGCCCTaGCTAGGAGTCCATCGTTCTGCCATAACATTTGCTCCCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: TSIYSFQSSQGTLRP*LGVHRSAITFAPRS Trigger: TGACCTGGGAGCAAATGTTATGGCAGAACGATGGACTCCTAGCAAGGGCCGAAGCGTGCCCTGTGAAGACTGGAAAGAATATATGCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
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| 3UTR CAA 90 bp | ACAAACAGGCAAGAGGCTCTGATTTGGAATTTCAGAAGTACTTCTTaGAGAGGCAGTACAGTAGTGGTCCAGAGGGTGGACTCTGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: TNRQEALIWNFRSTS*RGSTVVVQRVDSGA Trigger: AGCTCCAGAGTCCACCCTCTGGACCACTACTGTACTGCCTCTCAAAGAAGTACTTCTGAAATTCCAAATCAGAGCCTCTTGCCTGTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
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| 3UTR-3UTR GCA 90 bp | CCTCTTCGTGCAGGCTTCTGGCTTTCTGTGCACTTTCAGACATTTTGGACATATCCCAGGTCATCTGCTTaGAAGAGGCAATCGAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: PLRAGFWLSVHFQTFWTYPRSSA*KRQSRV Trigger: AACTCTCGATTGCCTCTTGCAAGCAGATGACCTGGG...ATATGTCCAAAATGTCTGAAAGTGCACAGAAAGCCAGAAGCCTGCACGAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR-3UTR GCA 90 bp | AATGCTCCTCTGCTATCTGTTCTCTCAGGGCTTCCATATTCTAGTCCTGAGCCCTTCTGCCATAACATTTaGTCCCAGGTCATCTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: NAPLLSVLSGLPYSSPEPFCHNI*SQVICL Trigger: CAAGCAGATGACCTGGGAGCAAATGTTATGGCAGAA...GGGCTCAGGACTAGAATATGGAAGCCCTGAGAGAACAGATAGCAGAGGAGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTTAAACTTACAGGGAAGACAAGGTGGGCAAAATATGCAGAGCTACAAAACATCTACAGGGTACACCTaGCTGGCAGTTAGAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: VLNLQGRQGGQNMQSYKTSTGYT*LAVRAR Trigger: CCTGGCTCTAACTGCCAGTCAGGTGTACCCTGTAGA...TGTTTTGTAGCTCTGCATATTTTGCCCACCTTGTCTTCCCTGTAAGTTTAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311212.9 |
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| 3UTR-3UTR GCA 90 bp | GTGTTCCACTATGGTTTCCTTTGGTACTGCCACTCACTAACTTCAAGGGTAATGACTCTGGAGCTGAACTaGCTGAGTTCAGATTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: VFHYGFLWYCHSLTSRVMTLELN*LSSDSS Trigger: GCTGGAATCTGAACTCAGGCAGTTCAGCTCCAGAGT...CATTACCCTTGAAGTTAGTGAGTGGCAGTACCAAAGGAAACCATAGTGGAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
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| 3UTR-3UTR CCA 90 bp | GTCTTAAACTTACAGGGAAGACAAGGTGGGCAAAATATGCAGAGCTACAAAACACAGGGTACACCTGACTaGCAGTTAGAGCCAGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: VLNLQGRQGGQNMQSYKTQGTPD*QLEPGH Trigger: ATGACCTGGCTCTAACTGCCAGTCAGGTGTACCCTG...TGTTTTGTAGCTCTGCATATTTTGCCCACCTTGTCTTCCCTGTAAGTTTAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311212.9 |
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| 3UTR-3UTR CCA 90 bp | GTGTTCCACTATGGTTTCCTTTGGTACTGCCACTCACTAACTTCAAGGGTAATGCTTCTACTAACCAGCTaGGAGACCCCACACAAATTG | + |
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Preference number: 2 (lower is better) Translates to: VFHYGFLWYCHSLTSRVMLLLTS*ETPHKL Trigger: CAATTTGTGTGGGGTCTCCCAGCTGGTTAGTAGAAG...CATTACCCTTGAAGTTAGTGAGTGGCAGTACCAAAGGAAACCATAGTGGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523146.1 |
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| 3UTR-3UTR TCA 90 bp | ATCCCACCTCTTCGTGCAGGCTTCTGGCTTTCTGTGCACTTTCAGACATTTTGGAGGTTACCAAATCTCTaGCAAGCATATATTCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: IPPLRAGFWLSVHFQTFWRLPNL*QAYILS Trigger: GGAAAGAATATATGCTTGTCAGAGATTTGGTAACCT...CCAAAATGTCTGAAAGTGCACAGAAAGCCAGAAGCCTGCACGAAGAGGTGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR-3UTR TCA 90 bp | CTATCTGTTCTCTCAGGGCTTCCATATTCTAGTCCTGAGCCCTGTGTTTCAGGGGCTTATAGTTTCACTTaGGTAATTTTTCCACCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSVLSGLPYSSPEPCVSGAYSFT*VIFPPS Trigger: AGAGGGTGGAAAAATTACTCAAGTGAAACTATAAGC...CCCTGAAACACAGGGCTCAGGACTAGAATATGGAAGCCCTGAGAGAACAGATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR-3UTR TCA 90 bp | TGTGTTCCACTATGGTTTCCTTTGGTACTGCCACTCACTAACTTCAAGGGTAATACAGGCAAGAGGCTCTaGTTTGGAATTTCAGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: CVPLWFPLVLPLTNFKGNTGKRL*FGISEV Trigger: TACTTCTGAAATTCCAAATCAGAGCCTCTTGCCTGT...ATTACCCTTGAAGTTAGTGAGTGGCAGTACCAAAGGAAACCATAGTGGAACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
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| 3UTR-3UTR GCA 90 bp | CAATTGCTCTGTGTCATACGTTTTCTTACGAATAACAGGGCTTATAGTTTCACTCCCAGGTCATCTGCTTaGAAGAGGCAATCGAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: QLLCVIRFLTNNRAYSFTPRSSA*KRQSRV Trigger: AACTCTCGATTGCCTCTTGCAAGCAGATGACCTGGG...AGTGAAACTATAAGCCCTGTTATTCGTAAGAAAACGTATGACACAGAGCAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
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| 3UTR-3UTR CCA 90 bp | AAGAGATTCTCCAATTGCTCTGTGTCATACGTTTTCTTACGAATAACAGGGCTTAGGCAATCGAGAGTTTaGGAAACCCTAAGGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: KRFSNCSVSYVFLRITGLRQSRV*ETLRSE Trigger: CTCAGACCTTAGGGTTTCCCAAACTCTCGATTGCCT...AAGCCCTGTTATTCGTAAGAAAACGTATGACACAGAGCAATTGGAGAATCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518071.5 |
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| 3UTR CAA 90 bp | ACTTCAAGGGTAATGAGCTTAAACAAACAGGCAAGAGGCTCTGATTaGGAATTTCAGAAGTACTTCTTTGAGAGGCAGTACAGTAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: TSRVMSLNKQARGSD*EFQKYFFERQYSSG Trigger: ACCACTACTGTACTGCCTCTCAAAGAAGTACTTCTGAAATTCCAAATCAGAGCCTCTTGCCTGTTTGTTTAAGCTCATTACCCTTGAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
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| 3UTR-3UTR GCA 90 bp | TTTCCTCCTGTTATTTTTGCATGCAAATTAAGAGATTCTCCAATTGCTCTGTGTAGGAGTCCATCGTTCTaGCATAACATTTGCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: FPPVIFACKLRDSPIALCRSPSF*HNICSQ Trigger: CTGGGAGCAAATGTTATGGCAGAACGATGGACTCCT...ACACAGAGCAATTGGAGAATCTCTTAATTTGCATGCAAAAATAACAGGAGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
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| 3UTR-3UTR CCA 90 bp | ATCTTCTTTAATAAGACATTACAGCACACAACTGAGCCCCCAGTGTGTCAGTTACTTTTCAAGTTCAGATaGAAGTCATACTGTACACCA | + |
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Preference number: 2 (lower is better) Translates to: IFFNKTLQHTTEPPVCQLLFKFR*KSYCTP Trigger: TGGTGTACAGTATGACTTCCATCTGAACTTGAAAAG...TAACTGACACACTGGGGGCTCAGTTGTGTGCTGTAATGTCTTATTAAAGAAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311212.9 |
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| 3UTR CAA 90 bp | CATGTGAAGAGAATGGAAACAAGTTTAATCTTAACCCCATTCCTTTaGGCAAGTAATAGAAATACAGCATACAAATGGACCAATTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: HVKRMETSLILTPFL*ASNRNTAYKWTNSL Trigger: GAGAGAATTGGTCCATTTGTATGCTGTATTTCTATTACTTGCCAAAAGGAATGGGGTTAAGATTAAACTTGTTTCCATTCTCTTCACATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311212.9 |
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| 3UTR-3UTR GCA 90 bp | TGTAATCCACAGGATCAGATAAATGGCTCTAAGCAGTTACCAGTAAGTATTTTAAGAGCCAGGTCATACTaGAATTTTAAATATTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: CNPQDQINGSKQLPVSILRARSY*NFKYSN Trigger: GTTGGAATATTTAAAATTGCAGTATGACCTGGCTCT...TAAAATACTTACTGGTAACTGCTTAGAGCCATTTATCTGATCCTGTGGATTACA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311212.9 |
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| 3UTR GCA 72 bp | GGGCACGCTTCGGCCCTTGCTAGGAGTCCATCGTTCTaGCATAACATTTGCTCCCAGGTCATCTGCTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: GHASALARSPSF*HNICSQVICLQ Trigger: TTGCAAGCAGATGACCTGGGAGCAAATGTTATGGCAGAACGATGGACTCCTAGCAAGGGCCGAAGCGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
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| 3UTR GCA 72 bp | GCCCTTGCTAGGAGTCCATCGTTCTGCCATAACATTTaGTCCCAGGTCATCTGCTTGCAAGAGGCAATCGAG | + |
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Preference number: 3 (lower is better) Translates to: ALARSPSFCHNI*SQVICLQEAIE Trigger: CTCGATTGCCTCTTGCAAGCAGATGACCTGGGAGCAAATGTTATGGCAGAACGATGGACTCCTAGCAAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
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| 3UTR-3UTR CAA 90 bp | AATGCTCCTCTGCTATCTGTTCTCTCAGGGCTTCCATATTCTAGTCCTGAGCCCTCCCAGGTCATCTGCTaGCAAGAGGCAATCGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: NAPLLSVLSGLPYSSPEPSQVIC*QEAIES Trigger: ACTCTCGATTGCCTCTTGCAAGCAGATGACCTGGGA...GGGCTCAGGACTAGAATATGGAAGCCCTGAGAGAACAGATAGCAGAGGAGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR-3UTR CAA 90 bp | CTGTTCTCTCAGGGCTTCCATATTCTAGTCCTGAGCCCTGTGTTTCAGGGGTATGAGGCAATCGAGAGTTaGGGAAACCCTGTAAACAAC | + |
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Preference number: 3 (lower is better) Translates to: LFSQGFHILVLSPVFQGYEAIES*GNPVNN Trigger: GTTGTTTACAGGGTTTCCCAAACTCTCGATTGCCTC...ATACCCCTGAAACACAGGGCTCAGGACTAGAATATGGAAGCCCTGAGAGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR GCA 72 bp | CCATCCCACCTCTTCGTGCAGGCTTCTGGCTTTCTGTaGACTTTCAGACATTTTGGACATATAATGCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: PSHLFVQASGFL*TFRHFGHIMLL Trigger: GAGGAGCATTATATGTCCAAAATGTCTGAAAGTGCACAGAAAGCCAGAAGCCTGCACGAAGAGGTGGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR CCA 72 bp | GCAGGCTTCTGGCTTTCTGTGCACTTTCAGACATTTTaGACATATAATGCTCCTCTGCTATCTGTTCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: AGFWLSVHFQTF*TYNAPLLSVLS Trigger: TGAGAGAACAGATAGCAGAGGAGCATTATATGTCCAAAATGTCTGAAAGTGCACAGAAAGCCAGAAGCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR-3UTR CAA 90 bp | GCATTTGTGTTCCACTATGGTTTCCTTTGGTACTGCCACTCACTAACTTCAAGGTTCAGAAGTACTTCTTaGAGAGGCAGTACAGTAGTG | + |
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Preference number: 3 (lower is better) Translates to: AFVFHYGFLWYCHSLTSRFRSTS*RGSTVV Trigger: CACTACTGTACTGCCTCTCAAAGAAGTACTTCTGAA...CCTTGAAGTTAGTGAGTGGCAGTACCAAAGGAAACCATAGTGGAACACAAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
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| 3UTR TCA 72 bp | GCTCATGTAAGATCAATGCAGCTATTTCCCTATCACTaGGATATAGTGTTAAATATGGTGTCTTCAGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: AHVRSMQLFPYH*DIVLNMVSSAA Trigger: AGCAGCTGAAGACACCATATTTAACACTATATCTCAGTGATAGGGAAATAGCTGCATTGATCTTACATGAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311212.9 |
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| CDS-3UTR CCA 90 bp | TCGGCCCTTGCTAGGAGTCCATCGTTCTGCCATAACATTTGCTCCCAGGTCATCAGGCAATCGAGAGTTTaGGAAACCCTAAGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SALARSPSFCHNICSQVIRQSRV*ETLRSE Trigger: CTCAGACCTTAGGGTTTCCCAAACTCTCGATTGCCT...GATGACCTGGGAGCAAATGTTATGGCAGAACGATGGACTCCTAGCAAGGGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518071.5 |
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| CDS-3UTR CCA 90 bp | TGCTATCTGTTCTCTCAGGGCTTCCATATTCTAGTCCTGAGCCCTGTGTTTCAGCTTCGTGCAGGCTTCTaGCTTTCTGTGCACTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: CYLFSQGFHILVLSPVFQLRAGF*LSVHFQ Trigger: CTGAAAGTGCACAGAAAGCCAGAAGCCTGCACGAAG...CTGAAACACAGGGCTCAGGACTAGAATATGGAAGCCCTGAGAGAACAGATAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR CAA 72 bp | TCGTTCTGCCATAACATTTGCTCCCAGGTCATCTGCTaGCAAGAGGCAATCGAGAGTTTGGGAAACCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: SFCHNICSQVIC*QEAIESLGNPV Trigger: TACAGGGTTTCCCAAACTCTCGATTGCCTCTTGCAAGCAGATGACCTGGGAGCAAATGTTATGGCAGAACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| 3UTR CAA 72 bp | TCGTTCTGCCATAACATTTGCTCCCAGGTCATCTGCTaGCAAGAGGCAATCGAGAGTTTGGGAAACCCTAAG | + |
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Preference number: 4 (lower is better) Translates to: SFCHNICSQVIC*QEAIESLGNPK Trigger: CTTAGGGTTTCCCAAACTCTCGATTGCCTCTTGCAAGCAGATGACCTGGGAGCAAATGTTATGGCAGAACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518071.5 |
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| CDS-3UTR GCA 90 bp | CAGGTCATCTGCTTGCAAGAGGCAATCGAGAGTTTGGGAAACCCTGTAAACAACAGGAGTCCATCGTTCTaGCATAACATTTGCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QVICLQEAIESLGNPVNNRSPSF*HNICSQ Trigger: CTGGGAGCAAATGTTATGGCAGAACGATGGACTCCT...GTTGTTTACAGGGTTTCCCAAACTCTCGATTGCCTCTTGCAAGCAGATGACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| CDS-3UTR GCA 90 bp | CCCTTGCTAGGAGTCCATCGTTCTGCCATAACATTTGCTCCCAGGTCATCTGCTGCTTCTGGCTTTCTGTaGACTTTCAGACATTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: PLLGVHRSAITFAPRSSAASGFL*TFRHFG Trigger: TCCAAAATGTCTGAAAGTGCACAGAAAGCCAGAAGC...AGCAGATGACCTGGGAGCAAATGTTATGGCAGAACGATGGACTCCTAGCAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| CDS-3UTR TCA 90 bp | ATCTTCTTTAATAAGACATTACAGCACACAACTGAGCCCCCAGTGTGTCAGTTATCTACAGGGTACACCTaGCTGGCAGTTAGAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: IFFNKTLQHTTEPPVCQLSTGYT*LAVRAR Trigger: CCTGGCTCTAACTGCCAGTCAGGTGTACCCTGTAGA...TAACTGACACACTGGGGGCTCAGTTGTGTGCTGTAATGTCTTATTAAAGAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311212.9 |
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| CDS-3UTR GCA 90 bp | GCATTTGTGTTCCACTATGGTTTCCTTTGGTACTGCCACTCACTAACTTCAAGGACTCTGGAGCTGAACTaGCTGAGTTCAGATTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AFVFHYGFLWYCHSLTSRTLELN*LSSDSS Trigger: GCTGGAATCTGAACTCAGGCAGTTCAGCTCCAGAGT...CCTTGAAGTTAGTGAGTGGCAGTACCAAAGGAAACCATAGTGGAACACAAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
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| CDS-3UTR CCA 90 bp | CTGCCACTGAGCAGAGAAAGGGATATAAGAATTGCACTTGCAATTCTAGCTGATCAGGGTACACCTGACTaGCAGTTAGAGCCAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LPLSRERDIRIALAILADQGTPD*QLEPGH Trigger: ATGACCTGGCTCTAACTGCCAGTCAGGTGTACCCTG...ATCAGCTAGAATTGCAAGTGCAATTCTTATATCCCTTTCTCTGCTCAGTGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311212.9 |
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| 3UTR CAA 72 bp | CAAGAGGCTCTGATTTGGAATTTCAGAAGTACTTCTTaGAGAGGCAGTACAGTAGTGGTCCAGAGGGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: QEALIWNFRSTS*RGSTVVVQRVD Trigger: GTCCACCCTCTGGACCACTACTGTACTGCCTCTCAAAGAAGTACTTCTGAAATTCCAAATCAGAGCCTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
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| CDS-3UTR TCA 90 bp | CTGCCACTGAGCAGAGAAAGGGATATAAGAATTGCACTTGCAATTCTAGCTGATATTACAGCACACAACTaGGCCCCCAGTGTGTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: LPLSRERDIRIALAILADITAHN*APSVSV Trigger: AACTGACACACTGGGGGCTCAGTTGTGTGCTGTAAT...ATCAGCTAGAATTGCAAGTGCAATTCTTATATCCCTTTCTCTGCTCAGTGGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311212.9 |
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| CDS-3UTR TCA 90 bp | CCCTTGCTAGGAGTCCATCGTTCTGCCATAACATTTGCTCCCAGGTCATCTGCTGCTTATAGTTTCACTTaGGTAATTTTTCCACCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PLLGVHRSAITFAPRSSAAYSFT*VIFPPS Trigger: AGAGGGTGGAAAAATTACTCAAGTGAAACTATAAGC...AGCAGATGACCTGGGAGCAAATGTTATGGCAGAACGATGGACTCCTAGCAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
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| CDS-3UTR TCA 90 bp | CTTGCTAGGAGTCCATCGTTCTGCCATAACATTTGCTCCCAGGTCATCTGCTTGAGGTTACCAAATCTCTaGCAAGCATATATTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LARSPSFCHNICSQVICLRLPNL*QAYILS Trigger: GGAAAGAATATATGCTTGTCAGAGATTTGGTAACCT...CAAGCAGATGACCTGGGAGCAAATGTTATGGCAGAACGATGGACTCCTAGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
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| CDS-3UTR GCA 90 bp | GTTACCAAATCTCTGACAAGCATATATTCTTTCCAGTCTTCACAGGGCACGCTTAGGAGTCCATCGTTCTaGCATAACATTTGCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTKSLTSIYSFQSSQGTLRSPSF*HNICSQ Trigger: CTGGGAGCAAATGTTATGGCAGAACGATGGACTCCT...AAGCGTGCCCTGTGAAGACTGGAAAGAATATATGCTTGTCAGAGATTTGGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
||
| CDS-3UTR GCA 90 bp | CATATAATGCTCCTCTGCTATCTGTTCTCTCAGGGCTTCCATATTCTAGTCCTGCATATAATGCTCCTCTaGTATCTGTTCTCTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HIMLLCYLFSQGFHILVLHIMLL*YLFSQG Trigger: GCCCTGAGAGAACAGATAGCAGAGGAGCATTATATG...CAGGACTAGAATATGGAAGCCCTGAGAGAACAGATAGCAGAGGAGCATTATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520984.5 |
||
| CDS-3UTR CCA 90 bp | CCACTGAGCAGAGAAAGGGATATAAGAATTGCACTTGCAATTCTAGCTGATGAAGGAGGGAGAGGGTTCTaGGAATTAATCCAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PLSRERDIRIALAILADEGGRGF*ELIQPQ Trigger: TTGTGGCTGGATTAATTCCCAGAACCCTCTCCCTCC...TTCATCAGCTAGAATTGCAAGTGCAATTCTTATATCCCTTTCTCTGCTCAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311212.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCTCTGATTTGGAATTTCAGAAGTACTTCTTTGAGAGGCAGTACAGTAGTGCTTCTACTAACCAGCTaGGAGACCCCACACAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: EALIWNFRSTSLRGSTVVLLLTS*ETPHKL Trigger: CAATTTGTGTGGGGTCTCCCAGCTGGTTAGTAGAAG...CACTACTGTACTGCCTCTCAAAGAAGTACTTCTGAAATTCCAAATCAGAGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523146.1 |
||
| CDS-3UTR CCA 90 bp | CCACCTCTTCGTGCAGGCTTCTGGCTTTCTGTGCACTTTCAGACATTTTGGACACACTTTCAGACATTTTaGACATATAATGCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPLRAGFWLSVHFQTFWTHFQTF*TYNAPL Trigger: CAGAGGAGCATTATATGTCCAAAATGTCTGAAAGTG...TGTCCAAAATGTCTGAAAGTGCACAGAAAGCCAGAAGCCTGCACGAAGAGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520984.5 |
||
| 3UTR CAA 72 bp | TTAGGGTCTGGCATTTGTGTTCCACTATGGTTTCCTTaGGTACTGCCACTCACTAACTTCAAGGGTAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSGICVPLWFP*VLPLTNFKGNE Trigger: CTCATTACCCTTGAAGTTAGTGAGTGGCAGTACCAAAGGAAACCATAGTGGAACACAAATGCCAGACCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
||
| CDS-3UTR TCA 90 bp | CTGCCACTGAGCAGAGAAAGGGATATAAGAATTGCACTTGCAATTCTAGCTGATGAGTCAAAGGTGTCATaGATTCACCCTACAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPLSRERDIRIALAILADESKVS*IHPTDS Trigger: ACTGTCTGTAGGGTGAATTCATGACACCTTTGACTC...ATCAGCTAGAATTGCAAGTGCAATTCTTATATCCCTTTCTCTGCTCAGTGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519744.5 |
||
| CDS-3UTR TCA 90 bp | CCACTGAGCAGAGAAAGGGATATAAGAATTGCACTTGCAATTCTAGCTGATGAACTCAAACACAGGAAATaGTCAGAGGGGTACAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLSRERDIRIALAILADELKHRK*SEGYND Trigger: GTCATTGTACCCCTCTGATCATTTCCTGTGTTTGAG...TTCATCAGCTAGAATTGCAAGTGCAATTCTTATATCCCTTTCTCTGCTCAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311212.9 |
||
| CDS-3UTR TCA 90 bp | CCACTGAGCAGAGAAAGGGATATAAGAATTGCACTTGCAATTCTAGCTGATGAAAGAAACTATCAGCCCTaGAGCTTTTCCTTGGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: PLSRERDIRIALAILADERNYQP*SFSLET Trigger: CGTTTCCAAGGAAAAGCTTCAGGGCTGATAGTTTCT...TTCATCAGCTAGAATTGCAAGTGCAATTCTTATATCCCTTTCTCTGCTCAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311212.9 |
||
| CDS-3UTR GCA 90 bp | TTCTCCAATTGCTCTGTGTCATACGTTTTCTTACGAATAACAGGGCTTATAGTTCCCAGGTCATCTGCTTaGAAGAGGCAATCGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSNCSVSYVFLRITGLIVPRSSA*KRQSRV Trigger: AACTCTCGATTGCCTCTTGCAAGCAGATGACCTGGG...AACTATAAGCCCTGTTATTCGTAAGAAAACGTATGACACAGAGCAATTGGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
||
| CDS-3UTR TCA 90 bp | GTCTTAAACTTACAGGGAAGACAAGGTGGGCAAAATATGCAGAGCTACAAAACAATCAGAGGGGTACAATaGCACATAACCGCAATATAC | + |
|
Preference number: 4 (lower is better) Translates to: VLNLQGRQGGQNMQSYKTIRGVQ*HITAIY Trigger: GTATATTGCGGTTATGTGTCATTGTACCCCTCTGAT...TGTTTTGTAGCTCTGCATATTTTGCCCACCTTGTCTTCCCTGTAAGTTTAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000311212.9 |
||
| CDS-3UTR GCA 90 bp | TTTCCTCCTGTTATTTTTGCATGCAAATTAAGAGATTCTCCAATTGCTCTGTGTCCCAGGTCATCTGCTTaGAAGAGGCAATCGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FPPVIFACKLRDSPIALCPRSSA*KRQSRV Trigger: AACTCTCGATTGCCTCTTGCAAGCAGATGACCTGGG...ACACAGAGCAATTGGAGAATCTCTTAATTTGCATGCAAAAATAACAGGAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGATTCTCCAATTGCTCTGTGTCATACGTTTTCTTACGAATAACAGGGCTTTTCTGCCATAACATTTaGTCCCAGGTCATCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRFSNCSVSYVFLRITGLFCHNI*SQVICL Trigger: CAAGCAGATGACCTGGGAGCAAATGTTATGGCAGAA...AAGCCCTGTTATTCGTAAGAAAACGTATGACACAGAGCAATTGGAGAATCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
||
| CDS-3UTR CCA 90 bp | GCATTTGTGTTCCACTATGGTTTCCTTTGGTACTGCCACTCACTAACTTCAAGGCAAGAGGCTCTGATTTaGAATTTCAGAAGTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFVFHYGFLWYCHSLTSRQEALI*NFRSTS Trigger: AGAAGTACTTCTGAAATTCCAAATCAGAGCCTCTTG...CCTTGAAGTTAGTGAGTGGCAGTACCAAAGGAAACCATAGTGGAACACAAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTCTGATTTGGAATTTCAGAAGTACTTCTTTGAGAGGCAGTACAGTAGTCACTATGGTTTCCTTTaGTACTGCCACTCACTAACT | + |
|
Preference number: 4 (lower is better) Translates to: RGSDLEFQKYFFERQYSSHYGFL*YCHSLT Trigger: AGTTAGTGAGTGGCAGTACCAAAGGAAACCATAGTG...ACTACTGTACTGCCTCTCAAAGAAGTACTTCTGAAATTCCAAATCAGAGCCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
||
| CDS-3UTR TCA 90 bp | ACTTCAAGGGTAATGAGCTTAAACAAACAGGCAAGAGGCTCTGATTTGGAATTTACAGGCAAGAGGCTCTaGTTTGGAATTTCAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSRVMSLNKQARGSDLEFTGKRL*FGISEV Trigger: TACTTCTGAAATTCCAAATCAGAGCCTCTTGCCTGT...AAATTCCAAATCAGAGCCTCTTGCCTGTTTGTTTAAGCTCATTACCCTTGAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
||
| CDS-3UTR GCA 90 bp | ATTCTCCAATTGCTCTGTGTCATACGTTTTCTTACGAATAACAGGGCTTATAGTTTCTGCCATAACATTTaGTCCCAGGTCATCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILQLLCVIRFLTNNRAYSFCHNI*SQVICL Trigger: CAAGCAGATGACCTGGGAGCAAATGTTATGGCAGAA...ACTATAAGCCCTGTTATTCGTAAGAAAACGTATGACACAGAGCAATTGGAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
||
| 3UTR CAA 72 bp | GTAATGAGCTTAAACAAACAGGCAAGAGGCTCTGATTaGGAATTTCAGAAGTACTTCTTTGAGAGGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VMSLNKQARGSD*EFQKYFFERQY Trigger: GTACTGCCTCTCAAAGAAGTACTTCTGAAATTCCAAATCAGAGCCTCTTGCCTGTTTGTTTAAGCTCATTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
||
| CDS-3UTR TCA 90 bp | CCACTGAGCAGAGAAAGGGATATAAGAATTGCACTTGCAATTCTAGCTGATGAATTTACCATATCCATCTaGACAAACCCATTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLSRERDIRIALAILADEFTISI*TNPFSH Trigger: ATGGGAAAATGGGTTTGTTCAGATGGATATGGTAAA...TTCATCAGCTAGAATTGCAAGTGCAATTCTTATATCCCTTTCTCTGCTCAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311212.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCACTGAGCAGAGAAAGGGATATAAGAATTGCACTTGCAATTCTAGCTGATTTAGCCTTCCTTAATTaGGTAAGATTTACCATATCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLSRERDIRIALAILADLAFLN*VRFTIS Trigger: GGATATGGTAAATCTTACCCAATTAAGGAAGGCTAA...ATCAGCTAGAATTGCAAGTGCAATTCTTATATCCCTTTCTCTGCTCAGTGGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311212.9 |
||
| CDS-3UTR CCA 90 bp | CTAAGGCAGCAGATAAGTCATTTTTCACCTAGATCATCAGCTGCCCATAAAATCCCTGAAGCTTTTCCTTaGAAACGTCTTAAACTTACA | + |
|
Preference number: 4 (lower is better) Translates to: LRQQISHFSPRSSAAHKIPEAFP*KRLKLT Trigger: TGTAAGTTTAAGACGTTTCCAAGGAAAAGCTTCAGG...GATTTTATGGGCAGCTGATGATCTAGGTGAAAAATGACTTATCTGCTGCCTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000311212.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCAAGGGTAATGAGCTTAAACAAACAGGCAAGAGGCTCTGATTTGGAATTTATTTGTGTTCCACTATaGTTTCCTTTGGTACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSRVMSLNKQARGSDLEFICVPL*FPLVLP Trigger: TGGCAGTACCAAAGGAAACCATAGTGGAACACAAAT...AAATTCCAAATCAGAGCCTCTTGCCTGTTTGTTTAAGCTCATTACCCTTGAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
||
| CDS-3UTR GCA 90 bp | CTAAGGCAGCAGATAAGTCATTTTTCACCTAGATCATCAGCTGCCCATAAAATCAGAGCCAGGTCATACTaGAATTTTAAATATTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRQQISHFSPRSSAAHKIRARSY*NFKYSN Trigger: GTTGGAATATTTAAAATTGCAGTATGACCTGGCTCT...GATTTTATGGGCAGCTGATGATCTAGGTGAAAAATGACTTATCTGCTGCCTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000311212.9 |
||
| CDS-3UTR TCA 90 bp | TTCTCCAATTGCTCTGTGTCATACGTTTTCTTACGAATAACAGGGCTTATAGTTAGGTTACCAAATCTCTaGCAAGCATATATTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSNCSVSYVFLRITGLIVRLPNL*QAYILS Trigger: GGAAAGAATATATGCTTGTCAGAGATTTGGTAACCT...AACTATAAGCCCTGTTATTCGTAAGAAAACGTATGACACAGAGCAATTGGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
||
| CDS-3UTR CCA 90 bp | TCATCAGCTGCCCATAAAATCGTATGCACAATTTTAATGAATCAGTCTGCTCTACTTTTCAAGTTCAGATaGAAGTCATACTGTACACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSAAHKIVCTILMNQSALLFKFR*KSYCTP Trigger: TGGTGTACAGTATGACTTCCATCTGAACTTGAAAAG...TAGAGCAGACTGATTCATTAAAATTGTGCATACGATTTTATGGGCAGCTGATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000311212.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCTCCTGTTATTTTTGCATGCAAATTAAGAGATTCTCCAATTGCTCTGTGTGCTTATAGTTTCACTTaGGTAATTTTTCCACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPPVIFACKLRDSPIALCAYSFT*VIFPPS Trigger: AGAGGGTGGAAAAATTACTCAAGTGAAACTATAAGC...ACACAGAGCAATTGGAGAATCTCTTAATTTGCATGCAAAAATAACAGGAGGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
||
| CDS CCA 90 bp | GCTCCGCTTCCGCGGCTGGCCTGCGACCCGGCCACCTGCAGGGCCTaGCAGGCGCCCGAACTCATCCCCTTCCCGCGGCCCGCCCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: APLPRLACDPATCRA*QAPELIPFPRPAPG Trigger: GCCCGGGGCGGGCCGCGGGAAGGGGATGAGTTCGGGCGCCTGCCAGGCCCTGCAGGTGGCCGGGTCGCAGGCCAGCCGCGGAAGCGGAGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523922.1 |
||
| CDS CCA 90 bp | CGGCGGCTGTCGCCGGGGGTAAGGTTACCGCTCCGCTTCCGCGGCTaGCCTGCGACCCGGCCACCTGCAGGGCCTGGCAGGCGCCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RRLSPGVRLPLRFRG*PATRPPAGPGRRPN Trigger: GTTCGGGCGCCTGCCAGGCCCTGCAGGTGGCCGGGTCGCAGGCCAGCCGCGGAAGCGGAGCGGTAACCTTACCCCCGGCGACAGCCGCCG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520347.5 |
||
| CDS GCA 90 bp | CAAAGCTCCGCTCCGCTTCCGCGGCTGGCCTGCGACCCGGCCACCTaGAGGGCCTGGCAGGCGCCCGAACTCATCCCCTTCCCGCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QSSAPLPRLACDPAT*RAWQAPELIPFPRP Trigger: GGGCCGCGGGAAGGGGATGAGTTCGGGCGCCTGCCAGGCCCTGCAGGTGGCCGGGTCGCAGGCCAGCCGCGGAAGCGGAGCGGAGCTTTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523922.1 |
||
| CDS GCA 90 bp | CAAGACGCGCCTCCTGGAGGCCGAGACTGCCCGAAACCCGGCCCCTaGGTCCACCGGGAGCGCCACACTCTGGCAGCTGACCGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDAPPGGRDCPKPGP*VHRERHTLAADRRL Trigger: CAGCCGCCGGTCAGCTGCCAGAGTGTGGCGCTCCCGGTGGACGCAGGGGCCGGGTTTCGGGCAGTCTCGGCCTCCAGGAGGCGCGTCTTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520347.5 |
||
| CDS TCA 90 bp | GAAACCCGGCCCCTGCGTCCACCGGGAGCGCCACACTCTGGCAGCTaGCCGGCGGCTGTCGCCGGGGGTAAGGTTACCGCTCCGCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ETRPLRPPGAPHSGS*PAAVAGGKVTAPLP Trigger: CGGAAGCGGAGCGGTAACCTTACCCCCGGCGACAGCCGCCGGTCAGCTGCCAGAGTGTGGCGCTCCCGGTGGACGCAGGGGCCGGGTTTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520347.5 |
||
| CDS GCA 90 bp | TCCTCACGGACCCTGGACCAAGACGCGCCTCCTGGAGGCCGAGACTaGCCGAAACCCGGCCCCTGCGTCCACCGGGAGCGCCACACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSRTLDQDAPPGGRD*PKPGPCVHRERHTL Trigger: CAGAGTGTGGCGCTCCCGGTGGACGCAGGGGCCGGGTTTCGGGCAGTCTCGGCCTCCAGGAGGCGCGTCTTGGTCCAGGGTCCGTGAGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520347.5 |
||
| CDS CCA 90 bp | CACCAAAGGCCACGCAGCCCCCATCTAGCCAGTCCTCACGGACCCTaGACCAAGACGCGCCTCCTGGAGGCCGAGACTGCCCGAAACCCG | + |
|
Preference number: 5 (lower is better) Translates to: HQRPRSPHLASPHGP*TKTRLLEAETARNP Trigger: CGGGTTTCGGGCAGTCTCGGCCTCCAGGAGGCGCGTCTTGGTCCAGGGTCCGTGAGGACTGGCTAGATGGGGGCTGCGTGGCCTTTGGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520347.5 |
||
| CDS TCA 90 bp | TTCTTCACCCAGCCCTGGGAGCCACGTGATCCCGGTCCTGGTTGGTaGCCGGGCCGCGGCGTGTTTCACAAGTCGCTCGCTCGCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: FFTQPWEPRDPGPGW*PGRGVFHKSLARSS Trigger: GGATGAGCGAGCGAGCGACTTGTGAAACACGCCGCGGCCCGGTCACCAACCAGGACCGGGATCACGTGGCTCCCAGGGCTGGGTGAAGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518336.5 ENST00000520454.1 |
||
| CDS CCA 90 bp | ACAGTGAGGTCTCCACCCAACACTTCTCCGACCCCAGCTTCAGCCTaGCGCACCTTCCTTCCCAAACCCGCCTCTCCCGCCTCGGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: TVRSPPNTSPTPASA*RTFLPKPASPASET Trigger: GGTCTCCGAGGCGGGAGAGGCGGGTTTGGGAAGGAAGGTGCGCCAGGCTGAAGCTGGGGTCGGAGAAGTGTTGGGTGGAGACCTCACTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520347.5 |
||
| CDS-3UTR CAA 90 bp | AACATTTGCTCCCAGGTCATCTGCTTGCAAGAGGCAATCGAGAGTTTGGGAAACTCCCAGGTCATCTGCTaGCAAGAGGCAATCGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: NICSQVICLQEAIESLGNSQVIC*QEAIES Trigger: ACTCTCGATTGCCTCTTGCAAGCAGATGACCTGGGA...GTTTCCCAAACTCTCGATTGCCTCTTGCAAGCAGATGACCTGGGAGCAAATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
||
| CDS-3UTR CAA 90 bp | GTCTTAAACTTACAGGGAAGACAAGGTGGGCAAAATATGCAGAGCTACAAAACACTTAGGGTCTGGCATTaGTGTCCTACAGACAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLNLQGRQGGQNMQSYKTLRVWH*CPTDSA Trigger: TGCACTGTCTGTAGGACACAAATGCCAGACCCTAAG...TGTTTTGTAGCTCTGCATATTTTGCCCACCTTGTCTTCCCTGTAAGTTTAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311212.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGAGGCTCTGATTTGGAATTTCAGAAGTACTTCTTTGAGAGGCAGTACAGTCTTAGGGTCTGGCATTaGTGTTCCACTATGGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARGSDLEFQKYFFERQYSLRVWH*CSTMVS Trigger: GGAAACCATAGTGGAACACAAATGCCAGACCCTAAG...ACTGTACTGCCTCTCAAAGAAGTACTTCTGAAATTCCAAATCAGAGCCTCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
||
| CDS GCA 90 bp | ATCGATTTCCTTTCTGAAAGCAGAAATTCAAACGAACCAACCACCTaGTTTTGGACAGCTCAACTTAGGACTTGCTCTCAAGCCAACACA | + |
|
Preference number: 5 (lower is better) Translates to: IDFLSESRNSNEPTT*FWTAQLRTCSQANT Trigger: TGTGTTGGCTTGAGAGCAAGTCCTAAGTTGAGCTGTCCAAAAGCAGGTGGTTGGTTCGTTTGAATTTCTGCTTTCAGAAAGGAAATCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520347.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCCAATTGCTCTGTGTCATACGTTTTCTTACGAATAACAGGGCTTATAGTTTCCCAGGTCATCTGCTaGCAAGAGGCAATCGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FSNCSVSYVFLRITGLIVSQVIC*QEAIES Trigger: ACTCTCGATTGCCTCTTGCAAGCAGATGACCTGGGA...AACTATAAGCCCTGTTATTCGTAAGAAAACGTATGACACAGAGCAATTGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518071.5 ENST00000520984.5 |
||
| CDS-3UTR CAA 90 bp | GTGTTCCACTATGGTTTCCTTTGGTACTGCCACTCACTAACTTCAAGGGTAATGTTCAGAAGTACTTCTTaGAGAGGCAGTACAGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VFHYGFLWYCHSLTSRVMFRSTS*RGSTVV Trigger: CACTACTGTACTGCCTCTCAAAGAAGTACTTCTGAA...CATTACCCTTGAAGTTAGTGAGTGGCAGTACCAAAGGAAACCATAGTGGAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
||
| CDS-3UTR CAA 90 bp | GCAAGAGGCTCTGATTTGGAATTTCAGAAGTACTTCTTTGAGAGGCAGTACAGTGCAAGAGGCTCTGATTaGGAATTTCAGAAGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: ARGSDLEFQKYFFERQYSARGSD*EFQKYF Trigger: GAAGTACTTCTGAAATTCCAAATCAGAGCCTCTTGC...ACTGTACTGCCTCTCAAAGAAGTACTTCTGAAATTCCAAATCAGAGCCTCTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523146.1 |
||
| CDS-3UTR CAA 90 bp | AAGAGATTCTCCAATTGCTCTGTGTCATACGTTTTCTTACGAATAACAGGGCTTGAGGCAATCGAGAGTTaGGGAAACCCTGTAAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: KRFSNCSVSYVFLRITGLEAIES*GNPVNN Trigger: GTTGTTTACAGGGTTTCCCAAACTCTCGATTGCCTC...AAGCCCTGTTATTCGTAAGAAAACGTATGACACAGAGCAATTGGAGAATCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520984.5 |
||
| CDS-3UTR CAA 90 bp | TTTCCTCCTGTTATTTTTGCATGCAAATTAAGAGATTCTCCAATTGCTCTGTGTCTTAGGGTCTGGCATTaGTGTCCTACAGACAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FPPVIFACKLRDSPIALCLRVWH*CPTDSA Trigger: TGCACTGTCTGTAGGACACAAATGCCAGACCCTAAG...ACACAGAGCAATTGGAGAATCTCTTAATTTGCATGCAAAAATAACAGGAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520984.5 |
||
| CDS TCA 90 bp | CAGAAGTTTCTTTGCTCTCTAGACGTTAGTTCCCATTTGAGGGAATaGACTTGGTTAAGAGGGTTCTTTTACAAAGCTGAAAGATACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QKFLCSLDVSSHLRE*TWLRGFFYKAERYH Trigger: GTGGTATCTTTCAGCTTTGTAAAAGAACCCTCTTAACCAAGTTCATTCCCTCAAATGGGAACTAACGTCTAGAGAGCAAAGAAACTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520347.5 |
||
| CDS CCA 90 bp | GACAATTATCCCAAAAACACCTTTAAATTCCTACAACTTAGTGACTaGCATATGAAGAGGGACTTTGTGGTAAAGAAATTCCTAACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DNYPKNTFKFLQLSD*HMKRDFVVKKFLTF Trigger: GAACGTTAGGAATTTCTTTACCACAAAGTCCCTCTTCATATGCCAGTCACTAAGTTGTAGGAATTTAAAGGTGTTTTTGGGATAATTGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520498.1 |
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| CDS GCA 72 bp | ACCCTGGACCAAGACGCGCCTCCTGGAGGCCGAGACTaGCCGAAACCCGGCCCCTGCGTCCACCGGGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: TLDQDAPPGGRD*PKPGPCVHRER Trigger: GCGCTCCCGGTGGACGCAGGGGCCGGGTTTCGGGCAGTCTCGGCCTCCAGGAGGCGCGTCTTGGTCCAGGGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520347.5 |
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| CDS TCA 72 bp | CCCCTGCGTCCACCGGGAGCGCCACACTCTGGCAGCTaGCCGGCGGCTGTCGCCGGGGGTAAGGTTACCGCT | + |
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Preference number: 6 (lower is better) Translates to: PLRPPGAPHSGS*PAAVAGGKVTA Trigger: AGCGGTAACCTTACCCCCGGCGACAGCCGCCGGTCAGCTGCCAGAGTGTGGCGCTCCCGGTGGACGCAGGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520347.5 |
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| CDS GCA 72 bp | CCTCCTGGAGGCCGAGACTGCCCGAAACCCGGCCCCTaGGTCCACCGGGAGCGCCACACTCTGGCAGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: PPGGRDCPKPGP*VHRERHTLAAD Trigger: GTCAGCTGCCAGAGTGTGGCGCTCCCGGTGGACGCAGGGGCCGGGTTTCGGGCAGTCTCGGCCTCCAGGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520347.5 |
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| CDS CCA 72 bp | CCAGTCCTCACGGACCCTGGACCAAGACGCGCCTCCTaGAGGCCGAGACTGCCCGAAACCCGGCCCCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: PVLTDPGPRRAS*RPRLPETRPLR Trigger: ACGCAGGGGCCGGGTTTCGGGCAGTCTCGGCCTCCAGGAGGCGCGTCTTGGTCCAGGGTCCGTGAGGACTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520347.5 |
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| CDS CCA 72 bp | CCACGCAGCCCCCATCTAGCCAGTCCTCACGGACCCTaGACCAAGACGCGCCTCCTGGAGGCCGAGACTGCC | + |
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Preference number: 6 (lower is better) Translates to: PRSPHLASPHGP*TKTRLLEAETA Trigger: GGCAGTCTCGGCCTCCAGGAGGCGCGTCTTGGTCCAGGGTCCGTGAGGACTGGCTAGATGGGGGCTGCGTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520347.5 |
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| CDS TCA 72 bp | CAGCCCTGGGAGCCACGTGATCCCGGTCCTGGTTGGTaGCCGGGCCGCGGCGTGTTTCACAAGTCGCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: QPWEPRDPGPGW*PGRGVFHKSLA Trigger: AGCGAGCGACTTGTGAAACACGCCGCGGCCCGGTCACCAACCAGGACCGGGATCACGTGGCTCCCAGGGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518336.5 ENST00000520454.1 |
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| CDS CAA 72 bp | CTCCACATCCTGACCCTAGCTTTTAACACCATCGTTTaGGGGAGAGGAGAGGAGGAACGCACCCACAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LHILTLAFNTIV*GRGEEERTHSE Trigger: CTCACTGTGGGTGCGTTCCTCCTCTCCTCTCCCCAAAACGATGGTGTTAAAAGCTAGGGTCAGGATGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520347.5 |
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| CDS CAA 90 bp | AGGAGTCCATCGTTCTGCCATAACATTTGCTCCCAGGTCATCTGCTaGCAAGAGGCAATCGAGAGTTTGGGAAACCCTGTAAACAACCTT | + |
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Preference number: 6 (lower is better) Translates to: RSPSFCHNICSQVIC*QEAIESLGNPVNNL Trigger: AAGGTTGTTTACAGGGTTTCCCAAACTCTCGATTGCCTCTTGCAAGCAGATGACCTGGGAGCAAATGTTATGGCAGAACGATGGACTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520984.5 |
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| CDS GCA 72 bp | CTTTCTGAAAGCAGAAATTCAAACGAACCAACCACCTaGTTTTGGACAGCTCAACTTAGGACTTGCTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: LSESRNSNEPTT*FWTAQLRTCSQ Trigger: TTGAGAGCAAGTCCTAAGTTGAGCTGTCCAAAAGCAGGTGGTTGGTTCGTTTGAATTTCTGCTTTCAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520347.5 |
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| CDS TCA 72 bp | CTTTGCTCTCTAGACGTTAGTTCCCATTTGAGGGAATaGACTTGGTTAAGAGGGTTCTTTTACAAAGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LCSLDVSSHLRE*TWLRGFFYKAE Trigger: TTCAGCTTTGTAAAAGAACCCTCTTAACCAAGTTCATTCCCTCAAATGGGAACTAACGTCTAGAGAGCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520347.5 |
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| CDS CCA 72 bp | GTCCGATGTTACCGCAAGCTTACAAACCTATTCCCATaGAAACAGGTTTGGATACTTATGTATTATTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: VRCYRKLTNLFP*KQVWILMYYLD Trigger: GTCCAAATAATACATAAGTATCCAAACCTGTTTCCATGGGAATAGGTTTGTAAGCTTGCGGTAACATCGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520347.5 |
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| CDS TCA 72 bp | GGAATGAACTTGGTTAAGAGGGTTCTTTTACAAAGCTaGAAGATACCACTTTTTGTTACCGATGATCTGACG | + |
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Preference number: 6 (lower is better) Translates to: GMNLVKRVLLQS*KIPLFVTDDLT Trigger: CGTCAGATCATCGGTAACAAAAAGTGGTATCTTTCAGCTTTGTAAAAGAACCCTCTTAACCAAGTTCATTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520347.5 |
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| CDS CAA 72 bp | TTCCCATGGAAACAGGTTTGGATACTTATGTATTATTaGGACGACAGTAGTCACGTGATCAGCCTTTATGTA | + |
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Preference number: 6 (lower is better) Translates to: FPWKQVWILMYY*DDSSHVISLYV Trigger: TACATAAAGGCTGATCACGTGACTACTGTCGTCCAAATAATACATAAGTATCCAAACCTGTTTCCATGGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520347.5 |
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| CDS CAA 90 bp | ACAAACCTATTCCCATGGAAACAGGTTTGGATACTTATGTATTATTaGGACGACAGTAGTCACGTGATCAGCCTTTATGTATACCAATGT | + |
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Preference number: 6 (lower is better) Translates to: TNLFPWKQVWILMYY*DDSSHVISLYVYQC Trigger: ACATTGGTATACATAAAGGCTGATCACGTGACTACTGTCGTCCAAATAATACATAAGTATCCAAACCTGTTTCCATGGGAATAGGTTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520347.5 |
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| CDS CCA 72 bp | CCCAAAAACACCTTTAAATTCCTACAACTTAGTGACTaGCATATGAAGAGGGACTTTGTGGTAAAGAAATTC | + |
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Preference number: 6 (lower is better) Translates to: PKNTFKFLQLSD*HMKRDFVVKKF Trigger: GAATTTCTTTACCACAAAGTCCCTCTTCATATGCCAGTCACTAAGTTGTAGGAATTTAAAGGTGTTTTTGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520498.1 |
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| CDS TCA 72 bp | AGTTGGTCTTGCTGGATTGCTGAACAAATTATAAAATaGGATTATCAGCAAGCCACTAATTCCAGAAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SWSCWIAEQIIK*DYQQATNSRSF Trigger: GAAACTTCTGGAATTAGTGGCTTGCTGATAATCTCATTTTATAATTTGTTCAGCAATCCAGCAAGACCAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520347.5 |
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