RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF704 (Homo sapiens)

Ensembl gene IDs: ENSG00000164684

Ensembl transcript IDs: ENST00000327835.7, ENST00000517986.1, ENST00000519936.1, ENST00000520336.1, ENST00000522040.5

Found 630 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTaGACCAGGCCAGAGCATCATCTCGCATCAGTGGTGCTGCATGGG +
Preference number: 1 (lower is better)
Translates to: AAQGHWAICPWLRAS*TRPEHHLASVVLHG
Trigger: CCCATGCAGCACCACTGATGCGAGATGATGCTCTGGCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 90 bp TCCAGGCTGTCACACTGCCTCCCACCCACCAATGCAGCACACATCTaGTGGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTC +
Preference number: 1 (lower is better)
Translates to: SRLSHCLPPTNAAHI*WEGPRLNTTACWPL
Trigger: GAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCCAGCAGATGTGTGCTGCATTGGTGGGTGGGAGGCAGTGTGACAGCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 90 bp GTGTGGGGAGGCTGGCCAAGGGCTTTGGCACAAGGAGGCAATGTGTaGTCGCTTCAAGCTTCAGAGGCTCCTGGCAGCCTTCTCGGAAGG +
Preference number: 1 (lower is better)
Translates to: VWGGWPRALAQGGNV*SLQASEAPGSLLGR
Trigger: CCTTCCGAGAAGGCTGCCAGGAGCCTCTGAAGCTTGAAGCGAGCACACATTGCCTCCTTGTGCCAAAGCCCTTGGCCAGCCTCCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp AGGCTGTCACACTGCCTCCCACCCACCAATGCAGCACACATCTGCTaGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGC +
Preference number: 1 (lower is better)
Translates to: RLSHCLPPTNAAHIC*EGPRLNTTACWPLC
Trigger: GCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCCAGCAGATGTGTGCTGCATTGGTGGGTGGGAGGCAGTGTGACAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp GGCACAAGGAGGCAATGTGTGCTCGCTTCAAGCTTCAGAGGCTCCTaGCAGCCTTCTCGGAAGGCACGAGGCTGCTCTTTGCCAGCCCCT +
Preference number: 1 (lower is better)
Translates to: GTRRQCVLASSFRGS*QPSRKARGCSLPAP
Trigger: AGGGGCTGGCAAAGAGCAGCCTCGTGCCTTCCGAGAAGGCTGCCAGGAGCCTCTGAAGCTTGAAGCGAGCACACATTGCCTCCTTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp GCCGGATGGAGAGGGAAGGAGTGTGGGGAGGCTGGCCAAGGGCTTTaGCACAAGGAGGCAATGTGTGCTCGCTTCAAGCTTCAGAGGCTC +
Preference number: 1 (lower is better)
Translates to: AGWRGKECGEAGQGL*HKEAMCARFKLQRL
Trigger: GAGCCTCTGAAGCTTGAAGCGAGCACACATTGCCTCCTTGTGCCAAAGCCCTTGGCCAGCCTCCCCACACTCCTTCCCTCTCCATCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 90 bp TCAAGCTTCAGAGGCTCCTGGCAGCCTTCTCGGAAGGCACGAGGCTaGTCTTTGCCAGCCCCTCATCACAGTGGCCACGGTAGAAAACAC +
Preference number: 1 (lower is better)
Translates to: SSFRGSWQPSRKARG*SLPAPHHSGHGRKH
Trigger: GTGTTTTCTACCGTGGCCACTGTGATGAGGGGCTGGCAAAGAGCAGCCTCGTGCCTTCCGAGAAGGCTGCCAGGAGCCTCTGAAGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 90 bp GCAGCACACATCTGCTGGGAAGGCCCAAGGCTTAACACCACTGCCTaGTGGCCACTCTGCTTTGTCGCTCTCTGGAGAATGTCCTGTCAG +
Preference number: 1 (lower is better)
Translates to: AAHICWEGPRLNTTA*WPLCFVALWRMSCQ
Trigger: CTGACAGGACATTCTCCAGAGAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCCAGCAGATGTGTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 90 bp CTGCACTCTTGGCCGGAGGTACTTCCCTTCAGGTCATTCTCTCCTTaGTTCAGGCAGCTGCTCCCAGAGGAGAAAATGGCAGCTCCCTGG +
Preference number: 1 (lower is better)
Translates to: LHSWPEVLPFRSFSP*FRQLLPEEKMAAPW
Trigger: CCAGGGAGCTGCCATTTTCTCCTCTGGGAGCAGCTGCCTGAAGCAAGGAGAGAATGACCTGAAGGGAAGTACCTCCGGCCAAGAGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp CCTTGCTTCAGGCAGCTGCTCCCAGAGGAGAAAATGGCAGCTCCCTaGGAGGTACTTAGGGATGGTGACCACCAGCTGATCAGCACCAAG +
Preference number: 1 (lower is better)
Translates to: PCFRQLLPEEKMAAP*EVLRDGDHQLISTK
Trigger: CTTGGTGCTGATCAGCTGGTGGTCACCATCCCTAAGTACCTCCCAGGGAGCTGCCATTTTCTCCTCTGGGAGCAGCTGCCTGAAGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 90 bp TCAGAGGCTCCTGGCAGCCTTCTCGGAAGGCACGAGGCTGCTCTTTaGCAGCCCCTCATCACAGTGGCCACGGTAGAAAACACTAAGAAA +
Preference number: 1 (lower is better)
Translates to: SEAPGSLLGRHEAAL*QPLITVATVENTKK
Trigger: TTTCTTAGTGTTTTCTACCGTGGCCACTGTGATGAGGGGCTGGCAAAGAGCAGCCTCGTGCCTTCCGAGAAGGCTGCCAGGAGCCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp TTCCTGGACCAGGCCAGAGCATCATCTCGCATCAGTGGTGCTGCATaGGGGGTGACAGGACACCAGGAGGAGAAAGGACGTGTTAGAGTA +
Preference number: 1 (lower is better)
Translates to: FLDQARASSRISGAA*GVTGHQEEKGRVRV
Trigger: TACTCTAACACGTCCTTTCTCCTCCTGGTGTCCTGTCACCCCCCATGCAGCACCACTGATGCGAGATGATGCTCTGGCCTGGTCCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp GCACACATCTGCTGGGAAGGCCCAAGGCTTAACACCACTGCCTGCTaGCCACTCTGCTTTGTCGCTCTCTGGAGAATGTCCTGTCAGTCA +
Preference number: 1 (lower is better)
Translates to: AHICWEGPRLNTTAC*PLCFVALWRMSCQS
Trigger: TGACTGACAGGACATTCTCCAGAGAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCCAGCAGATGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp GACCAGCCACCTGTGGCTTGGTGGTCTACTAGTTATTCCACGCCTTaGTCCAGGGAATATGTGTCTGTGTCCAGGAAGGTACTGAGGGTC +
Preference number: 1 (lower is better)
Translates to: DQPPVAWWSTSYSTP*SREYVSVSRKVLRV
Trigger: GACCCTCAGTACCTTCCTGGACACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGCCACAGGTGGCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 90 bp ATCAGAGGTGAAGCAGTGGTAATTTTACTTGGTAACGAAGACTCATaGGGCCGGATGGAGAGGGAAGGAGTGTGGGGAGGCTGGCCAAGG +
Preference number: 1 (lower is better)
Translates to: IRGEAVVILLGNEDS*GRMEREGVWGGWPR
Trigger: CCTTGGCCAGCCTCCCCACACTCCTTCCCTCTCCATCCGGCCTCATGAGTCTTCGTTACCAAGTAAAATTACCACTGCTTCACCTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 90 bp CACGTGGAGAGGACCGGTAGGGTTGGTGACTTGCACGGCGGGCTTTaGGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTTTAC +
Preference number: 1 (lower is better)
Translates to: HVERTGRVGDLHGGL*GTVKGLAICLVILY
Trigger: GTAAAGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGCAAGTCACCAACCCTACCGGTCCTCTCCACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp GGTAGGGCCATGTGGGCTGTGCTCTGTTGTCTAAAGCAAACCTGCTaGGACAGTTTGGAGTTCTCTACCTCTTCTGAAATCAGTCAGTGG +
Preference number: 1 (lower is better)
Translates to: GRAMWAVLCCLKQTC*DSLEFSTSSEISQW
Trigger: CCACTGACTGATTTCAGAAGAGGTAGAGAACTCCAAACTGTCCCAGCAGGTTTGCTTTAGACAACAGAGCACAGCCCACATGGCCCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp ATGGTTATGTTCGGGCAGGAATTGTCTAATAAAAGGGCACCTTGTTaGTGCCTGGAGCTGCTGACAGGCACTTTGCAGCTAAGCGCACAC +
Preference number: 1 (lower is better)
Translates to: MVMFGQELSNKRAPC*CLELLTGTLQLSAH
Trigger: GTGTGCGCTTAGCTGCAAAGTGCCTGTCAGCAGCTCCAGGCACCAACAAGGTGCCCTTTTATTAGACAATTCCTGCCCGAACATAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 90 bp AACACTTTACGGGGCACAGCCTGGGCATGCCAAAAGGAGGCAGAGTaGGAGAGCTGGATAACTCAGCGTATCTATATTCAAGTCTGCCAT +
Preference number: 1 (lower is better)
Translates to: NTLRGTAWACQKEAE*ESWITQRIYIQVCH
Trigger: ATGGCAGACTTGAATATAGATACGCTGAGTTATCCAGCTCTCTCACTCTGCCTCCTTTTGGCATGCCCAGGCTGTGCCCCGTAAAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 90 bp TTTGTGATGAGCGTGGCTGGCTGTGTGACTAAGCCGCTCTCCTCATaGTCACCTAAAACCGTTCAGACAGATGGAATATTTCCCCCGAAG +
Preference number: 1 (lower is better)
Translates to: FVMSVAGCVTKPLSS*SPKTVQTDGIFPPK
Trigger: CTTCGGGGGAAATATTCCATCTGTCTGAACGGTTTTAGGTGATCATGAGGAGAGCGGCTTAGTCACACAGCCAGCCACGCTCATCACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 90 bp ACAGGTAGGGCCATGTGGGCTGTGCTCTGTTGTCTAAAGCAAACCTaGTGGGACAGTTTGGAGTTCTCTACCTCTTCTGAAATCAGTCAG +
Preference number: 1 (lower is better)
Translates to: TGRAMWAVLCCLKQT*WDSLEFSTSSEISQ
Trigger: CTGACTGATTTCAGAAGAGGTAGAGAACTCCAAACTGTCCCAGCAGGTTTGCTTTAGACAACAGAGCACAGCCCACATGGCCCTACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 90 bp GTTATGTTCGGGCAGGAATTGTCTAATAAAAGGGCACCTTGTTGGTaGCTGGAGCTGCTGACAGGCACTTTGCAGCTAAGCGCACACATT +
Preference number: 1 (lower is better)
Translates to: VMFGQELSNKRAPCW*LELLTGTLQLSAHI
Trigger: AATGTGTGCGCTTAGCTGCAAAGTGCCTGTCAGCAGCTCCAGGCACCAACAAGGTGCCCTTTTATTAGACAATTCCTGCCCGAACATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp AAGTACACAGAGCCGTGGGCTAGCAGGCAGAAAGCAGCCCCAACTTaGGTAGGAGGTACAGAACTGTGTGAAAAATGCTTTAGAAAGGAG +
Preference number: 1 (lower is better)
Translates to: KYTEPWASRQKAAPT*VGGTELCEKCFRKE
Trigger: CTCCTTTCTAAAGCATTTTTCACACAGTTCTGTACCTCCTACCCAAGTTGGGGCTGCTTTCTGCCTGCTAGCCCACGGCTCTGTGTACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp CAGATGAGGGCAAAGGGGAGGGTAATCTTTCAATGGCAAATTCACTaGGGCTTGCCAAGATGGGGGAAAGCAAGACTGGTAGCTAGAATG +
Preference number: 1 (lower is better)
Translates to: QMRAKGRVIFQWQIH*GLPRWGKARLVARM
Trigger: CATTCTAGCTACCAGTCTTGCTTTCCCCCATCTTGGCAAGCCCCAGTGAATTTGCCATTGAAAGATTACCCTCCCCTTTGCCCTCATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 90 bp GGACAGCATTGCCACCTAGCTTTTGAGTTAGCACTCAATGACATGTaGATGCCTGTCATTTCCACACGAGTGTCACACAGGAAGGACTGC +
Preference number: 1 (lower is better)
Translates to: GQHCHLAFELALNDM*MPVISTRVSHRKDC
Trigger: GCAGTCCTTCCTGTGTGACACTCGTGTGGAAATGACAGGCATTCACATGTCATTGAGTGCTAACTCAAAAGCTAGGTGGCAATGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 90 bp CAAGCAGTAACAAATAGCTCCGAGTTGCCATTTGTGTCACATCCCTaGAAGAAGCATCGAGGCTTACCCAGATGGCTACAGGTGCCAATT +
Preference number: 1 (lower is better)
Translates to: QAVTNSSELPFVSHP*KKHRGLPRWLQVPI
Trigger: AATTGGCACCTGTAGCCATCTGGGTAAGCCTCGATGCTTCTTTCAGGGATGTGACACAAATGGCAACTCGGAGCTATTTGTTACTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 90 bp TGCTGCACTTTGGAGTCTGATGAAGGGGGAACATGGATTCAGCAGTaGCAACTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTT +
Preference number: 1 (lower is better)
Translates to: CCTLESDEGGTWIQQ*QLIQNPGLLSKVCL
Trigger: AAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAGTTGGCACTGCTGAATCCATGTTCCCCCTTCATCAGACTCCAAAGTGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp AGGAGTATAATCCCTTTTCTTCAAGACCAGCCACCTGTGGCTTGGTaGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCT +
Preference number: 1 (lower is better)
Translates to: RSIIPFLQDQPPVAW*STSYSTPWSREYVS
Trigger: AGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGCCACAGGTGGCTGGTCTTGAAGAAAAGGGATTATACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp GTAAGGAGTATAATCCCTTTTCTTCAAGACCAGCCACCTGTGGCTTaGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTG +
Preference number: 1 (lower is better)
Translates to: VRSIIPFLQDQPPVA*WSTSYSTPWSREYV
Trigger: CACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGCCACAGGTGGCTGGTCTTGAAGAAAAGGGATTATACTCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 90 bp TCTAAAGCAAACCTGCTGGGACAGTTTGGAGTTCTCTACCTCTTCTaGAATCAGTCAGTGGTGGAGTCTGGAGAGAAGGAAAATGACCCA +
Preference number: 1 (lower is better)
Translates to: SKANLLGQFGVLYLF*NQSVVESGEKENDP
Trigger: TGGGTCATTTTCCTTCTCTCCAGACTCCACCACTGACTGATTTCAGAAGAGGTAGAGAACTCCAAACTGTCCCAGCAGGTTTGCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 90 bp AAAGCAGCCCCAACTTGGGTAGGAGGTACAGAACTGTGTGAAAAATaGTTTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTC +
Preference number: 1 (lower is better)
Translates to: KAAPTWVGGTELCEK*FRKEKRSQGSYIQL
Trigger: GAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAAAGCATTTTTCACACAGTTCTGTACCTCCTACCCAAGTTGGGGCTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 90 bp ACAGATGGAATATTTCCCCCGAAGGGAGGGAATAGCCACACTGACTaGGCCTTACATCCCAGTTATAGTAATATTTATCCCCTTGCACCT +
Preference number: 1 (lower is better)
Translates to: TDGIFPPKGGNSHTD*ALHPSYSNIYPLAP
Trigger: AGGTGCAAGGGGATAAATATTACTATAACTGGGATGTAAGGCTCAGTCAGTGTGGCTATTCCCTCCCTTCGGGGGAAATATTCCATCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 90 bp ATATGTACAATTCTGGCCACTTTTCTCTCAACCTTTGCAAGTGAATaGTGCACTTTGGAGTCTGATGAAGGGGGAACATGGATTCAGCAG +
Preference number: 1 (lower is better)
Translates to: ICTILATFLSTFASE*CTLESDEGGTWIQQ
Trigger: CTGCTGAATCCATGTTCCCCCTTCATCAGACTCCAAAGTGCAGCATTCACTTGCAAAGGTTGAGAGAAAAGTGGCCAGAATTGTACATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp CCTAACTTGCACGATCAGTGGTGTATATTGGAATTCATAGCTTTCTaGGTGGCCTGTAAGGAGTATAATCCCTTTTCTTCAAGACCAGCC +
Preference number: 1 (lower is better)
Translates to: PNLHDQWCILEFIAF*VACKEYNPFSSRPA
Trigger: GGCTGGTCTTGAAGAAAAGGGATTATACTCCTTACAGGCCACCCAGAAAGCTATGAATTCCAATATACACCACTGATCGTGCAAGTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 90 bp GAGCTGCCCAACGGGTGTATGGCTGTTCTATCTCAGCTTTGCTTTTaGTGTTATCTGCATACTTGGCTAATTAGGCTAGCTTTTGGATTA +
Preference number: 1 (lower is better)
Translates to: ELPNGCMAVLSQLCF*CYLHTWLIRLAFGL
Trigger: TAATCCAAAAGCTAGCCTAATTAGCCAAGTATGCAGATAACATCAAAAGCAAAGCTGAGATAGAACAGCCATACACCCGTTGGGCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 90 bp TCCTGGTTCTTGGGAACTCAGTCACTTTCTGATCACAACCTCATGTaGCTGCTAGTTCTTCACAGTGAAAAATCAAGCACTTGTTCTTTT +
Preference number: 1 (lower is better)
Translates to: SWFLGTQSLSDHNLM*LLVLHSEKSSTCSF
Trigger: AAAAGAACAAGTGCTTGATTTTTCACTGTGAAGAACTAGCAGGCACATGAGGTTGTGATCAGAAAGTGACTGAGTTCCCAAGAACCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 90 bp AAGCCCAATAAATGGAACATAGTGCAAGCCCTGGCCCTACTAAACTaGGAAATTCCTATACCTACATGCATTTTCCTTTTGGCGTTATGT +
Preference number: 1 (lower is better)
Translates to: KPNKWNIVQALALLN*EIPIPTCIFLLALC
Trigger: ACATAACGCCAAAAGGAAAATGCATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTCCATTTATTGGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 90 bp TTGCCTTATCCACATCAATCATTTACAGAACTTGCCTGGTCCTTCTaGGGCACTGACATTTGCAACCTCTCCTATATAGAATTAGGAATC +
Preference number: 1 (lower is better)
Translates to: LPYPHQSFTELAWSF*GTDICNLSYIELGI
Trigger: GATTCCTAATTCTATATAGGAGAGGTTGCAAATGTCAGTGCCTCAGAAGGACCAGGCAAGTTCTGTAAATGATTGATGTGGATAAGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 90 bp GCAACCCCAGGTAGAACCATCCACAAAGTAAGTACAGGTCAACAATaGTATCAGACTAGATTGGCAACACCATATTCATTGTTACAAGCA +
Preference number: 1 (lower is better)
Translates to: ATPGRTIHKVSTGQQ*YQTRLATPYSLLQA
Trigger: TGCTTGTAACAATGAATATGGTGTTGCCAATCTAGTCTGATATCATTGTTGACCTGTACTTACTTTGTGGATGGTTCTACCTGGGGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp ATTTGTACAGTTTTAATAAACTCTTCACAACTCCCCTCTGTTTCCTaGTTCTTGGGAACTCAGTCACTTTCTGATCACAACCTCATGTGC +
Preference number: 1 (lower is better)
Translates to: ICTVLINSSQLPSVS*FLGTQSLSDHNLMC
Trigger: GCACATGAGGTTGTGATCAGAAAGTGACTGAGTTCCCAAGAACCAGGAAACAGAGGGGAGTTGTGAAGAGTTTATTAAAACTGTACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp TCTTCTTTCTTTCTTCATGGGTCTTTCTACATCCTGTTATTGTCATaGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGAAAGGACT +
Preference number: 1 (lower is better)
Translates to: SSFFLHGSFYILLLS*QRRYDSFPSEEERT
Trigger: AGTCCTTTCCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGTAGAAAGACCCATGAAGAAAGAAAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 90 bp CTGGCTGACCTTGTCAGTCTAAAACATACAGTATTGCTGGTGCTGTaGCTAGTACTGATTGGTAATCAAGATGCAAAATTAGATGAAGCT +
Preference number: 1 (lower is better)
Translates to: LADLVSLKHTVLLVL*LVLIGNQDAKLDEA
Trigger: AGCTTCATCTAATTTTGCATCTTGATTACCAATCAGTACTAGTCACAGCACCAGCAATACTGTATGTTTTAGACTGACAAGGTCAGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp AAGGACTACAGTTTAATCACCATCTCTGCCTCCTTTCAAAATCTGTaGTTACCTGCTTTCGGAACCATAGCTTTCTTCTTTCTTTCTTCA +
Preference number: 1 (lower is better)
Translates to: KDYSLITISASFQNL*LPAFGTIAFFFLSS
Trigger: TGAAGAAAGAAAGAAGAAAGCTATGGTTCCGAAAGCAGGTAACCACAGATTTTGAAAGGAGGCAGAGATGGTGATTAAACTGTAGTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp TTTCAAGTAGATGCCAGCTGTCCCCTTGGGAAAGTGCAGTTTAACTaGTATGAACATTTAACATTGTACATCTTCGATCTGAAAATTTCC +
Preference number: 1 (lower is better)
Translates to: FQVDASCPLGKVQFN*YEHLTLYIFDLKIS
Trigger: GGAAATTTTCAGATCGAAGATGTACAATGTTAAATGTTCATACCAGTTAAACTGCACTTTCCCAAGGGGACAGCTGGCATCTACTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 90 bp TTGCTTGTTAATCCAGTGTTACTAGAACATCCACCTTTAAAGAACTaGGCACATTTTCTAACAGCCAACATTTCCCATTTATGCTTACGA +
Preference number: 1 (lower is better)
Translates to: LLVNPVLLEHPPLKN*AHFLTANISHLCLR
Trigger: TCGTAAGCATAAATGGGAAATGTTGGCTGTTAGAAAATGTGCCCAGTTCTTTAAAGGTGGATGTTCTAGTAACACTGGATTAACAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp GGCCGGATGGAGAGGGAAGGAGTGTGGGGAGGCTGGCCAAGGGCTTaGGCACAAGGAGGCAATGTGTGCTCGCTTCAAGCTTCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: GRMEREGVWGGWPRA*AQGGNVCSLQASEA
Trigger: AGCCTCTGAAGCTTGAAGCGAGCACACATTGCCTCCTTGTGCCAAAGCCCTTGGCCAGCCTCCCCACACTCCTTCCCTCTCCATCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCGCCTTTTGCGTAGATTaGCCTCTGAGCTCCCTGCGG +
Preference number: 2 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLAFCVD*PLSSLR
Trigger: CCGCAGGGAGCTCAGAGGCCAATCTACGCAAAAGGC...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCAAAACTAGTTATAGCTaGTCCAAGCTGGGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGKTSYS*SKLGSQ
Trigger: CTGAGAACCCAGCTTGGAGCAGCTATAACTAGTTTT...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTGCCGCCCAAGGCCACTaGGCAATCTGCCCATGGCTC +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSAAQGH*AICPWL
Trigger: GAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGGC...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACACTGCCAGCCTGCTGTaGGAGCAGTCTGCCCAGTCC +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNTASLL*EQSAQS
Trigger: GGACTGGGCAGACTGCTCCCACAGCAGGCTGGCAGT...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTTTCCAACACCTGCAGTaGCAGGCCAGGGCAGGAGCG +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSFQHLQ*QARAGA
Trigger: CGCTCCTGCCCTGGCCTGCCACTGCAGGTGTTGGAA...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTAGGGCACCTTGTTGGTaGCTGGAGCTGCTGACAGGC +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSRAPCW*LELLTG
Trigger: GCCTGTCAGCAGCTCCAGGCACCAACAAGGTGCCCT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTGCAGCCCTGCACTCTTaGCCGGAGGTACTTCCCTTC +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSAALHS*PEVLPF
Trigger: GAAGGGAAGTACCTCCGGCCAAGAGTGCAGGGCTGC...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCTTTGTGTCACATCCCTaGAAGAAGCATCGAGGCTTA +
Preference number: 2 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLFVSHP*KKHRGL
Trigger: TAAGCCTCGATGCTTCTTTCAGGGATGTGACACAAA...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTATCAGTGGTGCTGCATaGGGGGTGACAGGACACCAG +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSISGAA*GVTGHQ
Trigger: CTGGTGTCCTGTCACCCCCCATGCAGCACCACTGAT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTACAGGTGACAAGCTCTaGCCGCCCAAGGCCACTGGG +
Preference number: 2 (lower is better)
Translates to: RFARRLISKTRSQACTWLTGDKL*PPKATG
Trigger: CCCAGTGGCCTTGGGCGGCCAGAGCTTGTCACCTGT...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACGCTGGCCAAGGGCTTTaGCACAAGGAGGCAATGTGT +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNAGQGL*HKEAMC
Trigger: ACACATTGCCTCCTTGTGCCAAAGCCCTTGGCCAGC...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTaGTCGCTCTCTGGAGAATGTCCTGTCAGTCACTATGAAATGACT +
Preference number: 2 (lower is better)
Translates to: GKAQGLTPLPAGHSA*SLSGECPVSHYEMT
Trigger: AGTCATTTCATAGTGACTGACAGGACATTCTCCAGAGAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp TGTGGGCAGAAGTCAGAGCCTGGAGTAATTAAACATGGAGCCCTCTaGCTCTGTCCTCATTGTCCCCTCCTAAGGTGGAACCCAGCTCAC +
Preference number: 2 (lower is better)
Translates to: CGQKSEPGVIKHGAL*LCPHCPLLRWNPAH
Trigger: GTGAGCTGGGTTCCACCTTAGGAGGGGACAATGAGGACAGAGCAAGAGGGCTCCATGTTTAATTACTCCAGGCTCTGACTTCTGCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTCAGCACCAAGAAGATaGGCAAGAGCCAGGTGTCCA +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNSAPRR*ARARCP
Trigger: TGGACACCTGGCTCTTGCTCATCTTCTTGGTGCTGA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTTGCACGGCGGGCTTTaGGGCACAGTGAAAGGATTA +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNLHGGL*GTVKGL
Trigger: TAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGCAA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCCACCTCATAAGAGCTaGCCAACGGGTGTATGGCTG +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSPPHKS*PTGVWL
Trigger: CAGCCATACACCCGTTGGGCAGCTCTTATGAGGTGG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp CAAGGAGGTTCCCCGAACAGTCAGGAGACTGTGAAAGGAGGGGCTTaGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCC +
Preference number: 2 (lower is better)
Translates to: QGGSPNSQETVKGGA*LSSQVLVTSQPSIS
Trigger: GGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAAAGCCCCTCCTTTCACAGTCTCCTGACTGTTCGGGGAACCTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTGCTGAAGTCTGCTGGTaGTTTCCGTGGACAATCCCT +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSAEVCW*FPWTIP
Trigger: AGGGATTGTCCACGGAAATCACCAGCAGACTTCAGC...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCTTGCCTGGTCCTTCTaGGGCACTGACATTTGCAAC +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSLAWSF*GTDICN
Trigger: GTTGCAAATGTCAGTGCCTCAGAAGGACCAGGCAAG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTTTGCACTTGGCAACATaGCTGAGTAACGGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSLHLAT*LSNGWA
Trigger: AGCCCACCCGTTACTCAGTCATGTTGCCAAGTGCAA...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAGGCCACTGGGCAATCTaGCCATGGCTCAGGGCTTCC +
Preference number: 2 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEGHWAI*PWLRAS
Trigger: GGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCC...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGGGGCTCCAGTTCCACTaGCAGCCTGCTGTGGGAGCA +
Preference number: 2 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRGLQFH*QPAVGA
Trigger: TGCTCCCACAGCAGGCTGGCAGTGGAACTGGAGCCC...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTAATGCAGCACACATCTaGTGGGAAGGCCCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSNAAHI*WEGPRL
Trigger: AAGCCTTGGGCCTTCCCAGCAGATGTGTGCTGCATT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCTTGCTTCAGGCAGCTaGTCCCAGAGGAGAAAATGG +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSLASGS*SQRRKW
Trigger: CCATTTTCTCCTCTGGGAGCAGCTGCCTGAAGCAAG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACCAAGGAGGCAATGTGTaGTCGCTTCAAGCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNQGGNV*SLQASE
Trigger: CTCTGAAGCTTGAAGCGAGCACACATTGCCTCCTTG...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACACTGCAACCTCTGCCTaGAGTTTCAAGGGATTCTCC +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNTATSA*SFKGFS
Trigger: GGAGAATCCCTTGAAACTGCAGGCAGAGGTTGCAGT...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTACAGGTAGGGCCATGTaGGCTGTGCTCTGTTGTCTA +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSTGRAM*AVLCCL
Trigger: TAGACAACAGAGCACAGCCCACATGGCCCTACCTGT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACCAGCCACCTGTGGCTTaGTGGTCTACTAGTTATTCC +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNQPPVA*WSTSYS
Trigger: GGAATAACTAGTAGACCACCAAGCCACAGGTGGCTG...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp CCAGTCCTCCCCCTCCTCCCAGCCAAACGAACACACACAGAGAACTaGGTTCCACAGAGATGGCATCAAACGAATGTCTGGTTAATTTGG +
Preference number: 2 (lower is better)
Translates to: PVLPLLPAKRTHTEN*VPQRWHQTNVWLIW
Trigger: CCAAATTAACCAGACATTCGTTTGATGCCATCTCTGTGGAACCAAGTTCTCTGTGTGTGTTCGTTTGGCTGGGAGGAGGGGGAGGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGAACTCAGCTTCGGGCTaGAGTCTGCTGGTGATTTCC +
Preference number: 2 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVNSASG*SLLVIS
Trigger: GGAAATCACCAGCAGACTTCAGCCCGAAGCTGAGTT...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTACTTGTTTAAACAGGTaGCAAGCTCTGGCCGCCCAA +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSTCLNR*QALAAQ
Trigger: TTGGGCGGCCAGAGCTTGTCACCTGTTTAAACAAGT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACCTCAACCTTTGCAAGTaGATGCTGCACTTTGGAGTC +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNLNLCK*MLHFGV
Trigger: GACTCCAAAGTGCAGCATTCACTTGCAAAGGTTGAG...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGGCTCTTTCCAACACCTaGAGTGGCAGGCCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMALSNT*SGRPGQ
Trigger: CTGCCCTGGCCTGCCACTGCAGGTGTTGGAAAGAGC...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACCCTGACACTGGCTTTTaGCAACCAAGGGAGAAAACT +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNPDTGF*QPREKT
Trigger: AGTTTTCTCCCTTGGTTGGCAAAAGCCAGTGTCAGG...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACCTGAAGCAAGGCTTCTaGTGTATCAGAGGTGAAGCA +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNLKQGF*CIRGEA
Trigger: TGCTTCACCTCTGATACAGCAGAAGCCTTGCTTCAG...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTTGGGCAATCTGCCCATaGCTCAGGGCTTCCTGGACC +
Preference number: 2 (lower is better)
Translates to: LERRRDPREATFSSVVLLWAICP*LRASWT
Trigger: GGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCA...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTTGGCTCAGCTAAGCTaGAGCTCAGCACTACTTATG +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNLAQLS*SSALLM
Trigger: CATAAGTAGTGCTGAGCTCCAGCTTAGCTGAGCCAA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCCACCTGTGGCTTGGTaGTCTACTAGTTATTCCACG +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSPPVAW*STSYST
Trigger: CGTGGAATAACTAGTAGACCACCAAGCCACAGGTGG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGTTCCTCCAAGGTTCCTaGAAGGGCTTTTCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVFLQGS*KGFSWL
Trigger: AAGCCAGGAAAAGCCCTTTCAGGAACCTTGGAGGAA...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTAATGCCTACCAGTTCTaGAGCAAGGCTTCTGCTGTA +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSNAYQF*SKASAV
Trigger: TACAGCAGAAGCCTTGCTTCAGAACTGGTAGGCATT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGCCCTTCTCGAGTTTATaGCATCTGGGGCCCTACAAA +
Preference number: 2 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVPFSSL*HLGPYK
Trigger: TTTGTAGGGCCCCAGATGGCATAAACTCGAGAAGGG...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTGCTTTGCTCCAGGACTaGTCCATAGCAAAGATCTCT +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSALLQD*SIAKIS
Trigger: AGAGATCTTTGCTATGGAGCAGTCCTGGAGCAAAGC...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGTCCAGGCTGTCACACTaGCTCCCACCCACCAATGCA +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQSRLSH*LPPTNA
Trigger: TGCATTGGTGGGTGGGAGGCAGTGTGACAGCCTGGA...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTGTTCACACAGGTCAGTaGTACAGAAGATGTGGTCGA +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSVHTGQ*YRRCGR
Trigger: TCGACCACATCTTCTGTAGCACTGACCTGTGTGAAC...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGCACGAGGCTGCTCTTTaGCAGCCCCTCATCACAGTG +
Preference number: 2 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRHEAAL*QPLITV
Trigger: CACTGTGATGAGGGGCTGGCAAAGAGCAGCCTCGTG...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGCGAGGCTTACCCAGATaGCTACAGGTGCCAATTCTT +
Preference number: 2 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVRGLPR*LQVPIL
Trigger: AAGAATTGGCACCTGTAGCCATCTGGGTAAGCCTCG...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACCTAAAGCAAACCTGCTaGGACAGTTTGGAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNLKQTC*DSLEFS
Trigger: AGAGAACTCCAAACTGTCCCAGCAGGTTTGCTTTAG...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTTGGCTCAGGGCTTCCTaGACCAGGCCAGAGCATCAT +
Preference number: 2 (lower is better)
Translates to: LERRRDPREATFSSVVLLWLRAS*TRPEHH
Trigger: ATGATGCTCTGGCCTGGTCCAGGAAGCCCTGAGCCA...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAGCTTCAGAGGCTCCTaGCAGCCTTCTCGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQSFRGS*QPSRKA
Trigger: TGCCTTCCGAGAAGGCTGCCAGGAGCCTCTGAAGCT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTACATTAACAACAGCCTaGCCTCTAGCTCAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSTLTTA*PLAQAD
Trigger: ATCTGCCTGAGCTAGAGGCCAGGCTGTTGTTAATGT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp ATGTGGGCTGTGCTCTGTTGTCTAAAGCAAACCTGCTGGGACAGTTaGGAGTTCTCTACCTCTTCTGAAATCAGTCAGTGGTGGAGTCTG +
Preference number: 2 (lower is better)
Translates to: MWAVLCCLKQTCWDS*EFSTSSEISQWWSL
Trigger: CAGACTCCACCACTGACTGATTTCAGAAGAGGTAGAGAACTCCAAACTGTCCCAGCAGGTTTGCTTTAGACAACAGAGCACAGCCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTCTTGCAACACATCCTaGCATATACTGCTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNSCNTS*HILLQE
Trigger: TTCTTGGAGCAGTATATGTCAGGATGTGTTGCAAGA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTGACAGCTGGACTTCCTaGACTCAGCTTCGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: LERRRDPREATFSSVVLLDSWTS*TQLRAE
Trigger: TTCAGCCCGAAGCTGAGTTCAGGAAGTCCAGCTGTC...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTAAAAGATGCCCAGAGTaGTGCGCTGTCTTGCAACAC +
Preference number: 2 (lower is better)
Translates to: RFARRLISKTRSQACTWLKRCPE*CAVLQH
Trigger: GTGTTGCAAGACAGCGCAGCACTCTGGGCATCTTTT...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACCTTTCCCTAACTCTGTaGATTTCTAGTCCTCAAGTG +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNLSLTL*ISSPQV
Trigger: CACTTGAGGACTAGAAATGCACAGAGTTAGGGAAAG...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGCTAATAGCTCTACCATaGTTCAGTGTGGGGCCATTC +
Preference number: 2 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVLIALP*FSVGPF
Trigger: GAATGGCCCCACACTGAACCATGGTAGAGCTATTAG...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTCTTATTTATAGGGCTTaGCGACTCCCCTCTCCCCAC +
Preference number: 2 (lower is better)
Translates to: LERRRDPREATFSSVVLLLIYRA*RLPSPH
Trigger: GTGGGGAGAGGGGAGTCGTCAAGCCCTATAAATAAG...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACACAGATTGTGGATGTTaGACTGTAGAACCTCCTTAT +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNTDCGC*TVEPPY
Trigger: ATAAGGAGGTTCTACAGTGCAACATCCACAATCTGT...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGAGGTCATTCTCTCCTTaGTTCAGGCAGCTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRRSFSP*FRQLLP
Trigger: TGGGAGCAGCTGCCTGAAGCAAGGAGAGAATGACCT...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTACATGGATTCAGCAGTaGCAACTAATTCAGAACCCA +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSTWIQQ*QLIQNP
Trigger: TGGGTTCTGAATTAGTTGGCACTGCTGAATCCATGT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGCCCACCCCCAGGCATTaGACCTGTGGTTCAAATGTT +
Preference number: 2 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRPTPRH*TCGSNV
Trigger: AACATTTGAACCACAGGTGCAATGCCTGGGGGTGGG...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACGTGAAAACAGAGATTTaGAAGACGCCTCATCTCAAA +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNVKTEI*KTPHLK
Trigger: TTTGAGATGAGGCGTCTTGCAAATCTCTGTTTTCAC...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGACGAAGCCCAATAAATaGAACATAGTGCAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVTKPNK*NIVQAL
Trigger: CAGGGCTTGCACTATGTTCCATTTATTGGGCTTCGT...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAAGTACACAGAGCCGTaGGCTAGCAGGCAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQKYTEP*ASRQKA
Trigger: TGCTTTCTGCCTGCTAGCCCACGGCTCTGTGTACTT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTGCCCAACGGGTGTATaGCTGTTCTATCTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: RFARRLISKTRSQACTWLCPTGV*LFYLSF
Trigger: AAAGCTGAGATAGAACAGCCATACACCCGTTGGGCA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGTGGGGCTTGCCAAGATaGGGGAAAGCAAGACTGGTA +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQWGLPR*GKARLV
Trigger: TACCAGTCTTGCTTTCCCCCATCTTGGCAAGCCCCA...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp AGTCAGGAGACTGTGAAAGGAGGGGCTTTGCTATCATCACAGGTGTaGGTCACATCACAGCCATCGATTTCCAATAAGCAGAGTATGGAA +
Preference number: 2 (lower is better)
Translates to: SQETVKGGALLSSQV*VTSQPSISNKQSME
Trigger: TTCCATACTCTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAAAGCCCCTCCTTTCACAGTCTCCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTGATGTTTCCCAACAGTaGCAGCTGGACTTCCTGAAC +
Preference number: 2 (lower is better)
Translates to: LERRRDPREATFSSVVLLDVSQQ*QLDFLN
Trigger: GTTCAGGAAGTCCAGCTGTCACTGTTGGGAAACATC...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGGTGCCAATTCTTGACTaGGTTGTGGCAGGTAGAGAG +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQVPILD*VVAGRE
Trigger: CTCTCTACCTGCCACAACTCAGTCAAGAATTGGCAC...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGCTGGCCCTACTAAACTaGGAAATTCCTATACCTACA +
Preference number: 2 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVLALLN*EIPIPT
Trigger: TGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAG...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTATGCCATTTCCTGGCTaGCCTTGTCAGTCTAAAACA +
Preference number: 2 (lower is better)
Translates to: RFARRLISKTRSQACTWLMPFPG*PCQSKT
Trigger: TGTTTTAGACTGACAAGGTCAGCCAGGAAATGGCAT...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAGGGTCTGTCTGCACCTaGAGCCAGAAAAGAAAGTAC +
Preference number: 2 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEGSVCT*SQKRKY
Trigger: GTACTTTCTTTTCTGGCTTCAGGTGCAGACAGACCC...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTGTGTGCATTACTCAGTaGTACAACTGGTACCTAAAA +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSVCITQ*YNWYLK
Trigger: TTTTAGGTACCAGTTGTATCACTGAGTAATGCACAC...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTTGTTGGCCAAGAGTTTaGGTTAGTTGTCAACACTTA +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSCWPRV*VSCQHL
Trigger: TAAGTGTTGACAACTAACTCAAACTCTTGGCCAACA...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGACTTTTCCCAATAGTTaGAACTGGGGGCTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQTFPNS*NWGLQA
Trigger: AGCCTGCAGCCCCCAGTTTCAACTATTGGGAAAAGT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTGTCTAAAGCAAACCTaGTGGGACAGTTTGGAGTTC +
Preference number: 2 (lower is better)
Translates to: RFARRLISKTRSQACTWLCLKQT*WDSLEF
Trigger: GAACTCCAAACTGTCCCAGCAGGTTTGCTTTAGACA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAACCTGCTGGGACAGTTTaGAGTTCTCTACCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEPAGTV*SSLPLL
Trigger: CAGAAGAGGTAGAGAACTCCAAACTGTCCCAGCAGG...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAAAGCAGCCCCAACTTaGGTAGGAGGTACAGAACTG +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQKAAPT*VGGTEL
Trigger: CAGTTCTGTACCTCCTACCCAAGTTGGGGCTGCTTT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTTGGTTCCACAGAGATaGCATCAAACGAATGTCTGG +
Preference number: 2 (lower is better)
Translates to: RFARRLISKTRSQACTWLLVPQR*HQTNVW
Trigger: CCAGACATTCGTTTGATGCCATCTCTGTGGAACCAA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAAGACTACTCTGGGTTaGCCTTGGAGGTGGGTAATG +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQKTTLG*PWRWVM
Trigger: CATTACCCACCTCCAAGGCCAACCCAGAGTAGTCTT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGGGTTTGAGAACATGGTaGGTCCCTGGGTCTTCTTAC +
Preference number: 2 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRGLRTW*VPGSSY
Trigger: GTAAGAAGACCCAGGGACCCACCATGTTCTCAAACC...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp TCTTTTTCTATTAGTAACAGTCCAACGATCAAGGGCCAGGGAGCTTaGCTGAAGAGAAAAACCTCTGGTCCAGGACTGTACCCTGTCATT +
Preference number: 2 (lower is better)
Translates to: SFSISNSPTIKGQGA*LKRKTSGPGLYPVI
Trigger: AATGACAGGGTACAGTCCTGGACCAGAGGTTTTTCTCTTCAGCAAAGCTCCCTGGCCCTTGATCGTTGGACTGTTACTAATAGAAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp GTGTTCTGCAGTTCAACCTGGTCTCCACCATTCTTGTGTTCCTCTTaGCCTTATCCACATCAATCATTTACAGAACTTGCCTGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: VFCSSTWSPPFLCSS*PYPHQSFTELAWSF
Trigger: GAAGGACCAGGCAAGTTCTGTAAATGATTGATGTGGATAAGGCAAAGAGGAACACAAGAATGGTGGAGACCAGGTTGAACTGCAGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGGTTCTCTACCTCTTCTaGAATCAGTCAGTGGTGGAG +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQVLYLF*NQSVVE
Trigger: CTCCACCACTGACTGATTTCAGAAGAGGTAGAGAAC...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGTCTAACATGACTTTCTaGACAGGTAGGGCCATGTGG +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQSNMTF*TGRAMW
Trigger: CCACATGGCCCTACCTGTTCAGAAAGTCATGTTAGA...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTGTATTGCTGGTGCTGTaGCTAGTACTGATTGGTAAT +
Preference number: 2 (lower is better)
Translates to: RFARRLISKTRSQACTWLVLLVL*LVLIGN
Trigger: ATTACCAATCAGTACTAGTCACAGCACCAGCAATAC...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAAACCAAGGTCTGAGTaGCCTTCTGACCACCTCATA +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQKPRSE*PSDHLI
Trigger: TATGAGGTGGTCAGAAGGTCACTCAGACCTTGGTTT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAATCTGAAATCAGTCAGTaGTGGAGTCTGGAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPESEISQ*WSLERR
Trigger: CCTTCTCTCCAGACTCCACCACTGACTGATTTCAGA...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTGAAGAGAAAAACCTCTaGTCCAGGACTGTACCCTGT +
Preference number: 2 (lower is better)
Translates to: LERRRDPREATFSSVVLLEEKNL*SRTVPC
Trigger: ACAGGGTACAGTCCTGGACCAGAGGTTTTTCTCTTC...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTTTCAAAGTTCTGGGATaGGGGATGGATTTTATACTT +
Preference number: 2 (lower is better)
Translates to: ARRALRHSERISYLPCHSFKVLG*GMDFIL
Trigger: AAGTATAAAATCCATCCCCCATCCCAGAACTTTGAA...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGTGTGTTTCAAAGTTCTaGGATGGGGGATGGATTTTA +
Preference number: 2 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVCVSKF*DGGWIL
Trigger: TAAAATCCATCCCCCATCCCAGAACTTTGAAACACA...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAGCTCAGCACTACTTATaGGGTATATATCTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEAQHYL*GIYLGV
Trigger: CACCCCCAGATATATACCCCATAAGTAGTGCTGAGC...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTGAATTCATAGCTTTCTaGGTGGCCTGTAAGGAGTAT +
Preference number: 2 (lower is better)
Translates to: RFARRLISKTRSQACTWLEFIAF*VACKEY
Trigger: ATACTCCTTACAGGCCACCCAGAAAGCTATGAATTC...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACAACTTGCACGATCAGTaGTGTATATTGGAATTCATA +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNNLHDQ*CILEFI
Trigger: TATGAATTCCAATATACACCACTGATCGTGCAAGTT...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACCATCAAACGAATGTCTaGTTAATTTGGCACTTCATT +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNHQTNV*LIWHFI
Trigger: AATGAAGTGCCAAATTAACCAGACATTCGTTTGATG...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTGTTATCTGCATACTTaGCTAATTAGGCTAGCTTTT +
Preference number: 2 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNCYLHT*LIRLAF
Trigger: AAAAGCTAGCCTAATTAGCCAAGTATGCAGATAACA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGGGTATATTCACACTCTaGCAGCCGCTCTTCCTCTTT +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQGIFTL*QPLFLF
Trigger: AAAGAGGAAGAGCGGCTGCCAGAGTGTGAATATACC...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGTGGAGAGAAGGAAAATaGCCCATTAACCTGGCTACA +
Preference number: 2 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMWREGK*PINLAT
Trigger: TGTAGCCAGGTTAATGGGTCATTTTCCTTCTCTCCA...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTTTGTTGATCTAACATaGCTTTCTGAACAGGTAGGG +
Preference number: 2 (lower is better)
Translates to: RFARRLISKTRSQACTWLFVDLT*LSEQVG
Trigger: CCCTACCTGTTCAGAAAGTCATGTTAGATCAACAAA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTAATACCCATTCCATCTaGTCTGTATTTCTACCCTTG +
Preference number: 2 (lower is better)
Translates to: RFARRLISKTRSQACTWLNTHSI*SVFLPL
Trigger: CAAGGGTAGAAATACAGATCAGATGGAATGGGTATT...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAACTCAGTCACTTTCTaGTCACAACCTCATGTGCCT +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQNSVTF*SQPHVP
Trigger: AGGCACATGAGGTTGTGATCAGAAAGTGACTGAGTT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAACAAATAGCTCCGAGTTaGCATTTGTGTCACATCCCT +
Preference number: 2 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEQIAPS*HLCHIP
Trigger: AGGGATGTGACACAAATGGCAACTCGGAGCTATTTG...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGTGCTCTTCCTACTTTaGATAGGTATAGGAGAAATA +
Preference number: 2 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVVLFLL*IGIGEI
Trigger: TATTTCTCCTATACCTATGCAAAGTAGGAAGAGCAC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTCCCATAATATGTGAATaGACAGATTGTGGATGTTGC +
Preference number: 2 (lower is better)
Translates to: RFARRLISKTRSQACTWLPIICE*TDCGCC
Trigger: GCAACATCCACAATCTGTGCATTCACATATTATGGG...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGGGGAAGAGCTTCTTATaGATCCAAGGAAGACTCCTA +
Preference number: 2 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRGKSFL*IQGRLL
Trigger: TAGGAGTCTTCCTTGGATCCATAAGAAGCTCTTCCC...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAACATTTAACATTCCTATaGCTGATCCCATGTCCCCTG +
Preference number: 2 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEHLTFL*LIPCPL
Trigger: CAGGGGACATGGGATCAGCCATAGGAATGTTAAATG...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp ACAGTTTTAATAAACTCTTCACAACTCCCCTCTGTTTCCTGGTTCTaGGGAACTCAGTCACTTTCTGATCACAACCTCATGTGCCTGCTA +
Preference number: 2 (lower is better)
Translates to: TVLINSSQLPSVSWF*GTQSLSDHNLMCLL
Trigger: TAGCAGGCACATGAGGTTGTGATCAGAAAGTGACTGAGTTCCCAAGAACCAGGAAACAGAGGGGAGTTGTGAAGAGTTTATTAAAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp TCTTGTGTTCCTCTTTGCCTTATCCACATCAATCATTTACAGAACTaGCCTGGTCCTTCTGAGGCACTGACATTTGCAACCTCTCCTATA +
Preference number: 2 (lower is better)
Translates to: SCVPLCLIHINHLQN*PGPSEALTFATSPI
Trigger: TATAGGAGAGGTTGCAAATGTCAGTGCCTCAGAAGGACCAGGCAAGTTCTGTAAATGATTGATGTGGATAAGGCAAAGAGGAACACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp CAAAGAGGGCATGTGTTCTGCAGTTCAACCTGGTCTCCACCATTCTaGTGTTCCTCTTTGCCTTATCCACATCAATCATTTACAGAACTT +
Preference number: 2 (lower is better)
Translates to: QRGHVFCSSTWSPPF*CSSLPYPHQSFTEL
Trigger: AAGTTCTGTAAATGATTGATGTGGATAAGGCAAAGAGGAACACAAGAATGGTGGAGACCAGGTTGAACTGCAGAACACATGCCCTCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp GCAATACTGAGGCTGACTCAGGTTCAAGACTACTCTGGGTTGGCCTaGGAGGTGGGTAATGTTGATTTTAAATATTCCTATTCTACACTG +
Preference number: 2 (lower is better)
Translates to: AILRLTQVQDYSGLA*EVGNVDFKYSYSTL
Trigger: CAGTGTAGAATAGGAATATTTAAAATCAACATTACCCACCTCCAAGGCCAACCCAGAGTAGTCTTGAACCTGAGTCAGCCTCAGTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAACCTGGCTACAATCTTaGCAGACAAGCAGTAACAAA +
Preference number: 2 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPETWLQS*QTSSNK
Trigger: TTTGTTACTGCTTGTCTGTCAAGATTGTAGCCAGGT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAATCCTGTCAGTCACTATaGAATGACTTCTTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPESCQSL*NDFFGE
Trigger: CTCTCCAAAGAAGTCATTTCATAGTGACTGACAGGA...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGCTGCTGTATCAGAGGTaGAGCAGTGGTAATTTTACT +
Preference number: 2 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRLLYQR*SSGNFT
Trigger: AGTAAAATTACCACTGCTTCACCTCTGATACAGCAG...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGTTCAGAACCCAGGGCTaGTTTCAAAAGTGTGTCTTA +
Preference number: 2 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRFRTQG*FQKCVL
Trigger: TAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAA...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGCCAATTCTGCTTTCATaGTCTGTAATTGTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQPILLS*SVIVGR
Trigger: TCTGCCCACAATTACAGAGCATGAAAGCAGAATTGG...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp TTTAATGCTAACAATGGAGACATTCCAAGGAGTGAAAACAGAGATTaGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACAT +
Preference number: 2 (lower is better)
Translates to: FNANNGDIPRSENRD*QDASSQRLGAKPVH
Trigger: ATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCTCTGTTTTCACTCCTTGGAATGTCTCCATTGTTAGCATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp TTGCAAGCAATACTGAGGCTGACTCAGGTTCAAGACTACTCTGGGTaGGCCTTGGAGGTGGGTAATGTTGATTTTAAATATTCCTATTCT +
Preference number: 2 (lower is better)
Translates to: LQAILRLTQVQDYSG*ALEVGNVDFKYSYS
Trigger: AGAATAGGAATATTTAAAATCAACATTACCCACCTCCAAGGCCAACCCAGAGTAGTCTTGAACCTGAGTCAGCCTCAGTATTGCTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAAAGTCCCATAATATGTaGATGCACAGATTGTGGATG +
Preference number: 2 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEKSHNM*MHRLWM
Trigger: CATCCACAATCTGTGCATTCACATATTATGGGACTT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR TCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGTCTCAGCTTTGCTTTTaGTGTTATCTGCATACTTGG +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQSQLCF*CYLHTW
Trigger: CCAAGTATGCAGATAACATCAAAAGCAAAGCTGAGA...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTCATCCTGACATATACTaGTCCAAGAAGTCAAATGGA +
Preference number: 2 (lower is better)
Translates to: LERRRDPREATFSSVVLLHPDIY*SKKSNG
Trigger: TCCATTTGACTTCTTGGAGCAGTATATGTCAGGATG...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGCTCTTTTATTTTAGTTaGCCAGATAGTGCCGACATG +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQLFYFS*PDSADM
Trigger: CATGTCGGCACTATCTGGGCAACTAAAATAAAAGAG...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp CTCAGGTTCAAGACTACTCTGGGTTGGCCTTGGAGGTGGGTAATGTaGATTTTAAATATTCCTATTCTACACTGGGTTCTTACAAAGATC +
Preference number: 2 (lower is better)
Translates to: LRFKTTLGWPWRWVM*ILNIPILHWVLTKI
Trigger: GATCTTTGTAAGAACCCAGTGTAGAATAGGAATATTTAAAATCAACATTACCCACCTCCAAGGCCAACCCAGAGTAGTCTTGAACCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGATCTATATTCAAGTCTaGCATGAGAATGATATCTGG +
Preference number: 2 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRIYIQV*HENDIW
Trigger: CCAGATATCATTCTCATGGCAGACTTGAATATAGAT...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGAGAAATCTCAGGCATTaGCAATGTCATTTAAATTGC +
Preference number: 2 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRRNLRH*QCHLNC
Trigger: GCAATTTAAATGACATTGGCAATGCCTGAGATTTCT...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGATTATAACAATTATATaGTGCAGGAGCCACTTCCTT +
Preference number: 2 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQIITII*CRSHFL
Trigger: AAGGAAGTGGCTCCTGCAGCATATAATTGTTATAAT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 90 bp GTTCCTGGTCCTACGATAGATATACCTTTTAAAGCATGTATATCATaGGATATGGGCTTTTTCAAAGTCAGTCATAATAAGCAAACCAGT +
Preference number: 2 (lower is better)
Translates to: VPGPTIDIPFKACIS*DMGFFKVSHNKQTS
Trigger: ACTGGTTTGCTTATTATGACTGACTTTGAAAAAGCCCATATCCAATGATATACATGCTTTAAAAGGTATATCTATCGTAGGACCAGGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 72 bp AGAGGCTCCTGGCAGCCTTCTCGGAAGGCACGAGGCTaGTCTTTGCCAGCCCCTCATCACAGTGGCCACGGT +
Preference number: 3 (lower is better)
Translates to: RGSWQPSRKARG*SLPAPHHSGHG
Trigger: ACCGTGGCCACTGTGATGAGGGGCTGGCAAAGAGCAGCCTCGTGCCTTCCGAGAAGGCTGCCAGGAGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCGAGTGCTGCGCTGTCTaGCAACACATCCTGACATAT +
Preference number: 3 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGECCAV*QHILTY
Trigger: ATATGTCAGGATGTGTTGCAAGACAGCGCAGCACTC...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 72 bp CCTGGCAGCCTTCTCGGAAGGCACGAGGCTGCTCTTTaGCAGCCCCTCATCACAGTGGCCACGGTAGAAAAC +
Preference number: 3 (lower is better)
Translates to: PGSLLGRHEAAL*QPLITVATVEN
Trigger: GTTTTCTACCGTGGCCACTGTGATGAGGGGCTGGCAAAGAGCAGCCTCGTGCCTTCCGAGAAGGCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp CACTGCCTCCCACCCACCAATGCAGCACACATCTGCTaGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: HCLPPTNAAHIC*EGPRLNTTACW
Trigger: CCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCCAGCAGATGTGTGCTGCATTGGTGGGTGGGAGGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCACAAATAGCTCCGAGTaGCCATTTGTGTCACATCCC +
Preference number: 3 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGTNSSE*PFVSHP
Trigger: GGGATGTGACACAAATGGCAACTCGGAGCTATTTGT...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 72 bp TCACACTGCCTCCCACCCACCAATGCAGCACACATCTaGTGGGAAGGCCCAAGGCTTAACACCACTGCCTGC +
Preference number: 3 (lower is better)
Translates to: SHCLPPTNAAHI*WEGPRLNTTAC
Trigger: GCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCCAGCAGATGTGTGCTGCATTGGTGGGTGGGAGGCAGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp CAGGCCAGAGCATCATCTCGCATCAGTGGTGCTGCATaGGGGGTGACAGGACACCAGGAGGAGAAAGGACGT +
Preference number: 3 (lower is better)
Translates to: QARASSRISGAA*GVTGHQEEKGR
Trigger: ACGTCCTTTCTCCTCCTGGTGTCCTGTCACCCCCCATGCAGCACCACTGATGCGAGATGATGCTCTGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCGTGGGCTGTGCTCTGTaGTCTAAAGCAAACCTGCTG +
Preference number: 3 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLVGCAL*SKANLL
Trigger: CAGCAGGTTTGCTTTAGACAACAGAGCACAGCCCAC...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp TGCTGGGAAGGCCCAAGGCTTAACACCACTGCCTGCTaGCCACTCTGCTTTGTCGCTCTCTGGAGAATGTCC +
Preference number: 3 (lower is better)
Translates to: CWEGPRLNTTAC*PLCFVALWRMS
Trigger: GGACATTCTCCAGAGAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp AGGCAGCTGCTCCCAGAGGAGAAAATGGCAGCTCCCTaGGAGGTACTTAGGGATGGTGACCACCAGCTGATC +
Preference number: 3 (lower is better)
Translates to: RQLLPEEKMAAP*EVLRDGDHQLI
Trigger: GATCAGCTGGTGGTCACCATCCCTAAGTACCTCCCAGGGAGCTGCCATTTTCTCCTCTGGGAGCAGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp AGGCAATGTGTGCTCGCTTCAAGCTTCAGAGGCTCCTaGCAGCCTTCTCGGAAGGCACGAGGCTGCTCTTTG +
Preference number: 3 (lower is better)
Translates to: RQCVLASSFRGS*QPSRKARGCSL
Trigger: CAAAGAGCAGCCTCGTGCCTTCCGAGAAGGCTGCCAGGAGCCTCTGAAGCTTGAAGCGAGCACACATTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCGCTCCGAGTTGCCATTaGTGTCACATCCCTGAAAGA +
Preference number: 3 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLAPSCH*CHIPER
Trigger: TCTTTCAGGGATGTGACACAAATGGCAACTCGGAGC...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 72 bp GGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTaGTTTGTCGCTCTCTGGAGAATGTCCTGTCAGTCA +
Preference number: 3 (lower is better)
Translates to: GPRLNTTACWPL*FVALWRMSCQS
Trigger: TGACTGACAGGACATTCTCCAGAGAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 72 bp ATCTGCTGGGAAGGCCCAAGGCTTAACACCACTGCCTaGTGGCCACTCTGCTTTGTCGCTCTCTGGAGAATG +
Preference number: 3 (lower is better)
Translates to: ICWEGPRLNTTA*WPLCFVALWRM
Trigger: CATTCTCCAGAGAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCCAGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 72 bp CCTTGCTACCTGTGTGTTTTCTCCAGGCTGTCACACTaGCTCCCACCCACCAATGCAGCACACATCTGCTGG +
Preference number: 3 (lower is better)
Translates to: PCYLCVFSRLSH*LPPTNAAHICW
Trigger: CCAGCAGATGTGTGCTGCATTGGTGGGTGGGAGGCAGTGTGACAGCCTGGAGAAAACACACAGGTAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp CTCCGCTGTATATCCCTGAGGGGTATATTCACACTCTaGCAGCCGCTCTTCCTCTTTCCTCTCGGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: LRCISLRGIFTL*QPLFLFPLGPS
Trigger: GCTGGGACCGAGAGGAAAGAGGAAGAGCGGCTGCCAGAGTGTGAATATACCCCTCAGGGATATACAGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp AGGACCGGTAGGGTTGGTGACTTGCACGGCGGGCTTTaGGGCACAGTGAAAGGATTAGCTATCTGCCTTGTC +
Preference number: 3 (lower is better)
Translates to: RTGRVGDLHGGL*GTVKGLAICLV
Trigger: GACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGCAAGTCACCAACCCTACCGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 72 bp TGGCCGGAGGTACTTCCCTTCAGGTCATTCTCTCCTTaGTTCAGGCAGCTGCTCCCAGAGGAGAAAATGGCA +
Preference number: 3 (lower is better)
Translates to: WPEVLPFRSFSP*FRQLLPEEKMA
Trigger: TGCCATTTTCTCCTCTGGGAGCAGCTGCCTGAAGCAAGGAGAGAATGACCTGAAGGGAAGTACCTCCGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp GAGCCGTGGGCTAGCAGGCAGAAAGCAGCCCCAACTTaGGTAGGAGGTACAGAACTGTGTGAAAAATGCTTT +
Preference number: 3 (lower is better)
Translates to: EPWASRQKAAPT*VGGTELCEKCF
Trigger: AAAGCATTTTTCACACAGTTCTGTACCTCCTACCCAAGTTGGGGCTGCTTTCTGCCTGCTAGCCCACGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp GCCATCTGTGCCCAAAACATAGGAAGGGGGCTCCAGTaGAGTGAGGGACAAGTGCTTAACAACATGAGTGGA +
Preference number: 3 (lower is better)
Translates to: AICAQNIGRGLQ*SEGQVLNNMSG
Trigger: TCCACTCATGTTGTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACAGATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCGATCAGTGGTGTATATaGGAATTCATAGCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLDQWCI*EFIAFW
Trigger: CCAGAAAGCTATGAATTCCAATATACACCACTGATC...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTGCCTTTTGCGTAGATaGGCCTCTGAGCTCCCTGCG +
Preference number: 3 (lower is better)
Translates to: RFARRLISKTRSQACTWLCLLRR*ASELPA
Trigger: CGCAGGGAGCTCAGAGGCCAATCTACGCAAAAGGCA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCAAATTCACTGGGGCTaGCCAAGATGGGGGAAAGCA +
Preference number: 3 (lower is better)
Translates to: ARRALRHSERISYLPCHSQIHWG*PRWGKA
Trigger: TGCTTTCCCCCATCTTGGCAAGCCCCAGTGAATTTG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGAAAGCAGCCCCAACTaGGGTAGGAGGTACAGAACT +
Preference number: 3 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVESSPN*GRRYRT
Trigger: AGTTCTGTACCTCCTACCCAAGTTGGGGCTGCTTTC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAAGCAGCCCTGCACTCTaGGCCGGAGGTACTTCCCTT +
Preference number: 3 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPESSPAL*AGGTSL
Trigger: AAGGGAAGTACCTCCGGCCAAGAGTGCAGGGCTGCT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp ATCCCTTTTCTTCAAGACCAGCCACCTGTGGCTTGGTaGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAA +
Preference number: 3 (lower is better)
Translates to: IPFLQDQPPVAW*STSYSTPWSRE
Trigger: TTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGCCACAGGTGGCTGGTCTTGAAGAAAAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp CCCTCCTCCCAGCCAAACGAACACACACAGAGAACTTaGTTCCACAGAGATGGCATCAAACGAATGTCTGGT +
Preference number: 3 (lower is better)
Translates to: PSSQPNEHTQRT*FHRDGIKRMSG
Trigger: ACCAGACATTCGTTTGATGCCATCTCTGTGGAACCAAGTTCTCTGTGTGTGTTCGTTTGGCTGGGAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTGGTCTCCACCATTCTaGTGTTCCTCTTTGCCTTAT +
Preference number: 3 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNWSPPF*CSSLPY
Trigger: ATAAGGCAAAGAGGAACACAAGAATGGTGGAGACCA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 72 bp GCCATGTGGGCTGTGCTCTGTTGTCTAAAGCAAACCTaGTGGGACAGTTTGGAGTTCTCTACCTCTTCTGAA +
Preference number: 3 (lower is better)
Translates to: AMWAVLCCLKQT*WDSLEFSTSSE
Trigger: TTCAGAAGAGGTAGAGAACTCCAAACTGTCCCAGCAGGTTTGCTTTAGACAACAGAGCACAGCCCACATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp ACAAATAGCTCCGAGTTGCCATTTGTGTCACATCCCTaGAAGAAGCATCGAGGCTTACCCAGATGGCTACAG +
Preference number: 3 (lower is better)
Translates to: TNSSELPFVSHP*KKHRGLPRWLQ
Trigger: CTGTAGCCATCTGGGTAAGCCTCGATGCTTCTTTCAGGGATGTGACACAAATGGCAACTCGGAGCTATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp AACCTGCTGGGACAGTTTGGAGTTCTCTACCTCTTCTaGAATCAGTCAGTGGTGGAGTCTGGAGAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: NLLGQFGVLYLF*NQSVVESGEKE
Trigger: TTCCTTCTCTCCAGACTCCACCACTGACTGATTTCAGAAGAGGTAGAGAACTCCAAACTGTCCCAGCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp GTGCACTCAGAATGGAAGTGGTTTGTTGATCTAACATaGCTTTCTGAACAGGTAGGGCCATGTGGGCTGTGC +
Preference number: 3 (lower is better)
Translates to: VHSEWKWFVDLT*LSEQVGPCGLC
Trigger: GCACAGCCCACATGGCCCTACCTGTTCAGAAAGTCATGTTAGATCAACAAACCACTTCCATTCTGAGTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp AGCGTGGCTGGCTGTGTGACTAAGCCGCTCTCCTCATaGTCACCTAAAACCGTTCAGACAGATGGAATATTT +
Preference number: 3 (lower is better)
Translates to: SVAGCVTKPLSS*SPKTVQTDGIF
Trigger: AAATATTCCATCTGTCTGAACGGTTTTAGGTGATCATGAGGAGAGCGGCTTAGTCACACAGCCAGCCACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp CGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATaGCTTTCCCTAACTCTGTGCATTTCTAGTCCTCAA +
Preference number: 3 (lower is better)
Translates to: RLISKTRSQACT*LSLTLCISSPQ
Trigger: TTGAGGACTAGAAATGCACAGAGTTAGGGAAAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp CCCCTTCAAAGAGGGCATGTGTTCTGCAGTTCAACCTaGTCTCCACCATTCTTGTGTTCCTCTTTGCCTTAT +
Preference number: 3 (lower is better)
Translates to: PLQRGHVFCSST*SPPFLCSSLPY
Trigger: ATAAGGCAAAGAGGAACACAAGAATGGTGGAGACCAGGTTGAACTGCAGAACACATGCCCTCTTTGAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACAAACACATGGTGAACTaGTTTAAACAGGTGACAAGC +
Preference number: 3 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNKHMVN*FKQVTS
Trigger: GCTTGTCACCTGTTTAAACAAGTTCACCATGTGTTT...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTAGTGAAAACAGAGATTaGCAAGACGCCTCATCTCAA +
Preference number: 3 (lower is better)
Translates to: ARRALRHSERISYLPCHSSENRD*QDASSQ
Trigger: TTGAGATGAGGCGTCTTGCAAATCTCTGTTTTCACT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGCTCTTTCTTCCTCTGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQLFLPL*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACAGAGGAAGAAAGAG...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGTGCAGCAGTGAAATCTaGGCTCACTGCAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQCSSEI*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAGATTTCACTGCTGCA...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAACCTGCTGGGACAGTTaGGAGTTCTCTACCTCTTCT +
Preference number: 3 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPETCWDS*EFSTSS
Trigger: AGAAGAGGTAGAGAACTCCAAACTGTCCCAGCAGGT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTTCTCCAGACCTATTTTaGCATGCCCTTTATTTTTCC +
Preference number: 3 (lower is better)
Translates to: ARRALRHSERISYLPCHSSPDLF*HALYFS
Trigger: GGAAAAATAAAGGGCATGCAAAAATAGGTCTGGAGA...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGTACATCGTTCACGGCTaGCTTTCGCCTACGGAATTC +
Preference number: 3 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRYIVHG*LSPTEF
Trigger: GAATTCCGTAGGCGAAAGCAAGCCGTGAACGATGTA...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTCTGTTTCCTGGTTCTaGGGAACTCAGTCACTTTCT +
Preference number: 3 (lower is better)
Translates to: RFARRLISKTRSQACTWLSVSWF*GTQSLS
Trigger: AGAAAGTGACTGAGTTCCCAAGAACCAGGAAACAGA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACATCTCAGCTTTGCTTTaGATGTTATCTGCATACTTG +
Preference number: 3 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNISALL*MLSAYL
Trigger: CAAGTATGCAGATAACATCAAAAGCAAAGCTGAGAT...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTAAAGATGCTAGGGTTTaGTATGTGGAAAAACCTCCT +
Preference number: 3 (lower is better)
Translates to: ARRALRHSERISYLPCHSKDARV*YVEKPP
Trigger: AGGAGGTTTTTCCACATACAAAACCCTAGCATCTTT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGTACTCTGGGTTGGCCTaGGAGGTGGGTAATGTTGAT +
Preference number: 3 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQYSGLA*EVGNVD
Trigger: ATCAACATTACCCACCTCCAAGGCCAACCCAGAGTA...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp CTCTGTTTCCTGGTTCTTGGGAACTCAGTCACTTTCTaGTCACAACCTCATGTGCCTGCTAGTTCTTCACAG +
Preference number: 3 (lower is better)
Translates to: LCFLVLGNSVTF*SQPHVPASSSQ
Trigger: CTGTGAAGAACTAGCAGGCACATGAGGTTGTGATCAGAAAGTGACTGAGTTCCCAAGAACCAGGAAACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 72 bp ATTCTGGCCACTTTTCTCTCAACCTTTGCAAGTGAATaGTGCACTTTGGAGTCTGATGAAGGGGGAACATGG +
Preference number: 3 (lower is better)
Translates to: ILATFLSTFASE*CTLESDEGGTW
Trigger: CCATGTTCCCCCTTCATCAGACTCCAAAGTGCAGCATTCACTTGCAAAGGTTGAGAGAAAAGTGGCCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp ATGTGGGCTGTGCTCTGTTGTCTAAAGCAAACCTGCTaGGACAGTTTGGAGTTCTCTACCTCTTCTGAAATC +
Preference number: 3 (lower is better)
Translates to: MWAVLCCLKQTC*DSLEFSTSSEI
Trigger: GATTTCAGAAGAGGTAGAGAACTCCAAACTGTCCCAGCAGGTTTGCTTTAGACAACAGAGCACAGCCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGTACAGGTGCCAATTCTaGACTGAGTTGTGGCAGGTA +
Preference number: 3 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQYRCQF*TELWQV
Trigger: TACCTGCCACAACTCAGTCAAGAATTGGCACCTGTA...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp CTTTATGTCTATGCTGAAAGGCCTGGACTGAATAGATaGTTTGAGAACATGGTGGGTCCCTGGGTCTTCTTA +
Preference number: 3 (lower is better)
Translates to: LYVYAERPGLNR*FENMVGPWVFL
Trigger: TAAGAAGACCCAGGGACCCACCATGTTCTCAAACCATCTATTCAGTCCAGGCCTTTCAGCATAGACATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGCACAGATTGTGGATGTaGCACTGTAGAACCTCCTTA +
Preference number: 3 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQHRLWM*HCRTSL
Trigger: TAAGGAGGTTCTACAGTGCAACATCCACAATCTGTG...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAGAAAAAGCAGCACCTaGTCCACAAAAGTCCATGGA +
Preference number: 3 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQRKSST*STKVHG
Trigger: TCCATGGACTTTTGTGGACAAGGTGCTGCTTTTTCT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp AAATCAGTCAGTGGTGGAGTCTGGAGAGAAGGAAAATaGCCCATTAACCTGGCTACAATCTTGACAGACAAG +
Preference number: 3 (lower is better)
Translates to: KSVSGGVWREGK*PINLATILTDK
Trigger: CTTGTCTGTCAAGATTGTAGCCAGGTTAATGGGTCATTTTCCTTCTCTCCAGACTCCACCACTGACTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp ATATTTCCCCCGAAGGGAGGGAATAGCCACACTGACTaGGCCTTACATCCCAGTTATAGTAATATTTATCCC +
Preference number: 3 (lower is better)
Translates to: IFPPKGGNSHTD*ALHPSYSNIYP
Trigger: GGGATAAATATTACTATAACTGGGATGTAAGGCTCAGTCAGTGTGGCTATTCCCTCCCTTCGGGGGAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAGGTGCTCTTCCTACTTaGCATAGGTATAGGAGAAAT +
Preference number: 3 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEGALPT*HRYRRN
Trigger: ATTTCTCCTATACCTATGCAAAGTAGGAAGAGCACC...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp AAACGAACACACACAGAGAACTTGGTTCCACAGAGATaGCATCAAACGAATGTCTGGTTAATTTGGCACTTC +
Preference number: 3 (lower is better)
Translates to: KRTHTENLVPQR*HQTNVWLIWHF
Trigger: GAAGTGCCAAATTAACCAGACATTCGTTTGATGCCATCTCTGTGGAACCAAGTTCTCTGTGTGTGTTCGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp GATGCCAGCTGTCCCCTTGGGAAAGTGCAGTTTAACTaGTATGAACATTTAACATTGTACATCTTCGATCTG +
Preference number: 3 (lower is better)
Translates to: DASCPLGKVQFN*YEHLTLYIFDL
Trigger: CAGATCGAAGATGTACAATGTTAAATGTTCATACCAGTTAAACTGCACTTTCCCAAGGGGACAGCTGGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR-3UTR CAA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTACATGCATTTTCCTTTaGGCGTTATGTTCCCTTTTG +
Preference number: 3 (lower is better)
Translates to: LERRRDPREATFSSVVLLTCIFL*ALCSLL
Trigger: CAAAAGGGAACATAACGCCAAAAGGAAAATGCATGT...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp AACGGGTGTATGGCTGTTCTATCTCAGCTTTGCTTTTaGTGTTATCTGCATACTTGGCTAATTAGGCTAGCT +
Preference number: 3 (lower is better)
Translates to: NGCMAVLSQLCF*CYLHTWLIRLA
Trigger: AGCTAGCCTAATTAGCCAAGTATGCAGATAACATCAAAAGCAAAGCTGAGATAGAACAGCCATACACCCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 72 bp GAGAGCTGGATAACTCAGCGTATCTATATTCAAGTCTaGCATGAGAATGATATCTGGGGAGAAATGATCTCT +
Preference number: 3 (lower is better)
Translates to: ESWITQRIYIQV*HENDIWGEMIS
Trigger: AGAGATCATTTCTCCCCAGATATCATTCTCATGGCAGACTTGAATATAGATACGCTGAGTTATCCAGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp GTTTTAATAAACTCTTCACAACTCCCCTCTGTTTCCTaGTTCTTGGGAACTCAGTCACTTTCTGATCACAAC +
Preference number: 3 (lower is better)
Translates to: VLINSSQLPSVS*FLGTQSLSDHN
Trigger: GTTGTGATCAGAAAGTGACTGAGTTCCCAAGAACCAGGAAACAGAGGGGAGTTGTGAAGAGTTTATTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp TTTCTTCATGGGTCTTTCTACATCCTGTTATTGTCATaGCAACGGCGCTATGATTCTTTTCCATCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: FLHGSFYILLLS*QRRYDSFPSEE
Trigger: CTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGTAGAAAGACCCATGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp AAATGGAACATAGTGCAAGCCCTGGCCCTACTAAACTaGGAAATTCCTATACCTACATGCATTTTCCTTTTG +
Preference number: 3 (lower is better)
Translates to: KWNIVQALALLN*EIPIPTCIFLL
Trigger: CAAAAGGAAAATGCATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp ATCATTTACAGAACTTGCCTGGTCCTTCTGAGGCACTaGCATTTGCAACCTCTCCTATATAGAATTAGGAAT +
Preference number: 3 (lower is better)
Translates to: IIYRTCLVLLRH*HLQPLLYRIRN
Trigger: ATTCCTAATTCTATATAGGAGAGGTTGCAAATGTCAGTGCCTCAGAAGGACCAGGCAAGTTCTGTAAATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp AAACATTGTCATGGACTAAGGGCAACAGAGGTTTTGTaGTTACTGTTGTTCTCTCTCTCCAGTCTTCTCATT +
Preference number: 3 (lower is better)
Translates to: KHCHGLRATEVL*LLLFSLSSLLI
Trigger: AATGAGAAGACTGGAGAGAGAGAACAACAGTAATCACAAAACCTCTGTTGCCCTTAGTCCATGACAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp AGTTTAATCACCATCTCTGCCTCCTTTCAAAATCTGTaGTTACCTGCTTTCGGAACCATAGCTTTCTTCTTT +
Preference number: 3 (lower is better)
Translates to: SLITISASFQNL*LPAFGTIAFFF
Trigger: AAAGAAGAAAGCTATGGTTCCGAAAGCAGGTAACCACAGATTTTGAAAGGAGGCAGAGATGGTGATTAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp GGTAGAACCATCCACAAAGTAAGTACAGGTCAACAATaGTATCAGACTAGATTGGCAACACCATATTCATTG +
Preference number: 3 (lower is better)
Translates to: GRTIHKVSTGQQ*YQTRLATPYSL
Trigger: CAATGAATATGGTGTTGCCAATCTAGTCTGATATCATTGTTGACCTGTACTTACTTTGTGGATGGTTCTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp ACACCAGAAACAGCAGACTTAAAACTCGAGTGCTCTTaGGATTTAATGGAGGACATTTCAGTTTCAAAAATC +
Preference number: 3 (lower is better)
Translates to: TPETADLKLECS*DLMEDISVSKI
Trigger: GATTTTTGAAACTGAAATGTCCTCCATTAAATCTCAAGAGCACTCGAGTTTTAAGTCTGCTGTTTCTGGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CCA 72 bp AATCCAGTGTTACTAGAACATCCACCTTTAAAGAACTaGGCACATTTTCTAACAGCCAACATTTCCCATTTA +
Preference number: 3 (lower is better)
Translates to: NPVLLEHPPLKN*AHFLTANISHL
Trigger: TAAATGGGAAATGTTGGCTGTTAGAAAATGTGCCCAGTTCTTTAAAGGTGGATGTTCTAGTAACACTGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR GCA 72 bp TTATATTTCAAAAGATCTCTAAACATTGGACAGCATTaGCACCTAGCTTTTGAGTTAGCACTCAATGACATG +
Preference number: 3 (lower is better)
Translates to: LYFKRSLNIGQH*HLAFELALNDM
Trigger: CATGTCATTGAGTGCTAACTCAAAAGCTAGGTGGCAATGCTGTCCAATGTTTAGAGATCTTTTGAAATATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp AACCTCTCCTATATAGAATTAGGAATCTTTTGGAAATaGGACTCATTGGGTTCAAAACCGTACAGCAATAAA +
Preference number: 3 (lower is better)
Translates to: NLSYIELGIFWK*DSLGSKPYSNK
Trigger: TTTATTGCTGTACGGTTTTGAACCCAATGAGTCTCATTTCCAAAAGATTCCTAATTCTATATAGGAGAGGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR TCA 72 bp AACCCAGCAGATAAAACCTATGCTAACTTTATCCAATaGAATATTCGTTCACTTCATGCAGTTTTGTTTGCT +
Preference number: 3 (lower is better)
Translates to: NPADKTYANFIQ*NIRSLHAVLFA
Trigger: AGCAAACAAAACTGCATGAAGTGAACGAATATTTCATTGGATAAAGTTAGCATAGGTTTTATCTGCTGGGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCACGGCGTGGACGGGTTaGACTGGTCGCTGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGTAWTG*TGRWGR
Trigger: GCGCCCCCAGCGACCAGTCCAACCCGTCCACGCCGT...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCGAGGGTGGTGGGAGCTaGGCGGCTCAACGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGEGGGS*AAQRRH
Trigger: ATGACGCCGTTGAGCCGCTCAGCTCCCACCACCCTC...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCCGTCGAAGAGCAGGTTaGTGGCCTCCGCCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGRRRAG*WPPPRR
Trigger: TCGACGAGGCGGAGGCCAGCAACCTGCTCTTCGACG...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCCGAAGCAGTTGGCCCTaGCACCAGGGCAAACGCTTA +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGRSSWP*HQGKRL
Trigger: TAAGCGTTTGCCCTGGTGTCAGGGCCAACTGCTTCG...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCGTAGGGTTGGTGACTTaGACGGCGGGCTTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGVGLVT*TAGFEA
Trigger: TGCCTCAAAGCCCGCCGTGCAAGTCACCAACCCTAC...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCTTACGGGGCACAGCCTaGGCATGCCAAAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGLRGTA*ACQKEA
Trigger: TGCCTCCTTTTGGCATGCCCAGGCTGTGCCCCGTAA...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCGGCTGCGGAAGGGCTTaGAGCTGTCAGCCGAGAGCG +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLGCGRA*SCQPRA
Trigger: CGCTCTCGGCTGACAGCTTCAAGCCCTTCCGCAGCC...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCCCCCAGGTGCAGCAGTaGAATCTTGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGPQVQQ*NLGSLQ
Trigger: TTGCAGTGAGCCAAGATTTCACTGCTGCACCTGGGG...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCGCTGAAGTCTGCTGGTaGTTTCCGTGGACAATCCCT +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGAEVCW*FPWTIP
Trigger: AGGGATTGTCCACGGAAATCACCAGCAGACTTCAGC...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCCTTGCCTGGTCCTTCTaGGGCACTGACATTTGCAAC +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGLAWSF*GTDICN
Trigger: GTTGCAAATGTCAGTGCCTCAGAAGGACCAGGCAAG...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCTTGCACGGCGGGCTTTaGGGCACAGTGAAAGGATTA +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGLHGGL*GTVKGL
Trigger: TAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGCAA...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCCGAGGTAGAGGGTGGTaGGAGCTGAGCGGCTCAACG +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLRGRGW*ELSGST
Trigger: CGTTGAGCCGCTCAGCTCCCACCACCCTCTACCTCG...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCACAGGTAGGGCCATGTaGGCTGTGCTCTGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGTGRAM*AVLCCL
Trigger: TAGACAACAGAGCACAGCCCACATGGCCCTACCTGT...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCTTCCTCCAAGGTTCCTaGAAGGGCTTTTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGFLQGS*KGFSWL
Trigger: AAGCCAGGAAAAGCCCTTTCAGGAACCTTGGAGGAA...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCACTTTTCCCAATAGTTaGAACTGGGGGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGTFPNS*NWGLQA
Trigger: AGCCTGCAGCCCCCAGTTTCAACTATTGGGAAAAGT...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCCGAGGCTTACCCAGATaGCTACAGGTGCCAATTCTT +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGRGLPR*LQVPIL
Trigger: AAGAATTGGCACCTGTAGCCATCTGGGTAAGCCTCG...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCAAGACTACTCTGGGTTaGCCTTGGAGGTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGKTTLG*PWRWVM
Trigger: CATTACCCACCTCCAAGGCCAACCCAGAGTAGTCTT...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCGAAAGTCCAGTGTTCTaGCTCTGTTTGTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGESPVF*LCLCQC
Trigger: GCACTGGCACAAACAGAGCCAGAACACTGGACTTTC...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCCTTGGACTCCCAAAGTaGTGGGATTATAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGLGLPK*WDYRRE
Trigger: TTCACGCCTATAATCCCAGCACTTTGGGAGTCCAAG...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCGGTATATTCACACTCTaGCAGCCGCTCTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGGIFTL*QPLFLF
Trigger: AAAGAGGAAGAGCGGCTGCCAGAGTGTGAATATACC...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 72 bp TCCTGGCAGCCTTCTCGGAAGGCACGAGGCTGCTCTTaGCCAGCCCCTCATCACAGTGGCCACGGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: SWQPSRKARGCS*PAPHHSGHGRK
Trigger: TTTTCTACCGTGGCCACTGTGATGAGGGGCTGGCAAAGAGCAGCCTCGTGCCTTCCGAGAAGGCTGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCCAGCCCGTCTGCCACTaGGTCTGTGTTGAGCTTGAT +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLQPVCH*VCVELD
Trigger: ATCAAGCTCAACACAGACTCAGTGGCAGACGGGCTG...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCCGGATGATGTGTGGGTaGCACTGGGATGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLRMMCG*HWDACE
Trigger: TTCACAGGCATCCCAGTGTCACCCACACATCATCCG...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGCCTCCGCCTCGTCGATaGCGTCGTCTGGCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVPPPRR*RRLAAR
Trigger: CCGCGCAGCCAGACGACGGCATCGACGAGGCGGAGG...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCATCATTTACAGAACTTaGCTGGTCCTTCTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGIIYRT*LVLLRH
Trigger: GTGCCTCAGAAGGACCAGGCAAGTTCTGTAAATGAT...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACGCCGCCCAAGGCCACTaGGCAATCTGCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNAAQGH*AICPWL
Trigger: GAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGGC...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCTTGGTTCCACAGAGATaGCATCAAACGAATGTCTGG +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGLVPQR*HQTNVW
Trigger: CCAGACATTCGTTTGATGCCATCTCTGTGGAACCAA...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCCTTCCAGGATCCGCTaGGGCTCTCGTTCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSPSRIR*GSRSAA
Trigger: TGCGGCCGAACGAGAGCCTCAGCGGATCCTGGAAGG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCACCTGGCTACAATCTTaGCAGACAAGCAGTAACAAA +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGTWLQS*QTSSNK
Trigger: TTTGTTACTGCTTGTCTGTCAAGATTGTAGCCAGGT...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCCCAACTGCCTGTGAATaGCTTTACACTCAAGATGTT +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGPTACE*LYTQDV
Trigger: AACATCTTGAGTGTAAAGTCATTCACAGGCAGTTGG...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGAGACCGGGGCCAGGCTaGTCAGCCCGTCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVRPGPG*SARLPL
Trigger: CAGTGGCAGACGGGCTGAGCAGCCTGGCCCCGGTCT...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCAATGCAGCACACATCTaGTGGGAAGGCCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLNAAHI*WEGPRL
Trigger: AAGCCTTGGGCCTTCCCAGCAGATGTGTGCTGCATT...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGCGCTGCTGCTGGTGCTaGAAGGCACGCAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVRCCWC*KARSRP
Trigger: AGGGCGGCTGCGTGCCTTCCAGCACCAGCAGCAGCG...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGTCGATGCCGTCGTCTaGCTGCGCGGGGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVVDAVV*LRGAAE
Trigger: TTCCGCAGCCCCGCGCAGCCAGACGACGGCATCGAC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACCTGAGCCCCTCTGCCTaGGGGTCTCTCAGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNLSPSA*GSLSRG
Trigger: TCCTCGACTGAGAGACCCCCAGGCAGAGGGGCTCAG...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTTCCAACACCTGCAGTaGCAGGCCAGGGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNFQHLQ*QARAGA
Trigger: CGCTCCTGCCCTGGCCTGCCACTGCAGGTGTTGGAA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCAAGATCTCTAAACATTaGACAGCATTGCCACCTAGC +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGKISKH*TALPPS
Trigger: GCTAGGTGGCAATGCTGTCCAATGTTTAGAGATCTT...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCGTAGGAGAATATAGATaGGCTTCCCATATCCCCATA +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGVGEYR*ASHIPI
Trigger: TATGGGGATATGGGAAGCCCATCTATATTCTCCTAC...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTCAGGGACTGGGAAGGTaGGACCGGGGCCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLQGLGR*DRGQAA
Trigger: AGCAGCCTGGCCCCGGTCTCACCTTCCCAGTCCCTG...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCAAGCCGCTCTCCTCATaGTCACCTAAAACCGTTCAG +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLKPLSS*SPKTVQ
Trigger: CTGAACGGTTTTAGGTGATCATGAGGAGAGCGGCTT...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACGCGTGGCTGGCTGTGTaGCTAAGCCGCTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNAWLAV*LSRSPH
Trigger: ATGAGGAGAGCGGCTTAGTCACACAGCCAGCCACGC...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGCTGTGGGAGCAGTCTaGCCAGTCCTCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVAVGAV*PVLPLL
Trigger: GAGGAGGGGGAGGACTGGGCAGACTGCTCCCACAGC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTGCGGCGGCGACGGCGTaGACGGGTTGGACTGGTCGC +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLAAATA*TGWTGR
Trigger: GCGACCAGTCCAACCCGTCCACGCCGTCGCCGCCGC...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCGAAGAGCAGGTTGCTaGCCTCCGCCTCGTCGATGC +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSRRAGC*PPPRRC
Trigger: GCATCGACGAGGCGGAGGCCAGCAACCTGCTCTTCG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCTTCTGGGATGGGGGATaGATTTTATACTTCATGACT +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGFWDGG*ILYFMT
Trigger: AGTCATGAAGTATAAAATCCATCCCCCATCCCAGAA...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCAAAGCAGCCCCAACTTaGGTAGGAGGTACAGAACTG +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLKAAPT*VGGTEL
Trigger: CAGTTCTGTACCTCCTACCCAAGTTGGGGCTGCTTT...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTACTGCCAGCCTGCTGTaGGAGCAGTCTGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSTASLL*EQSAQS
Trigger: GGACTGGGCAGACTGCTCCCACAGCAGGCTGGCAGT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTGCTGCCATTGGGGGTaGACTTGGCCGATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNCCHWG*TWPILE
Trigger: TTCCAGGATCGGCCAAGTTCACCCCCAATGGCAGCA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGCCTGTGCCCACCGGATaGTGTGTGGGTGACACTGGG +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVPVPTG*CVGDTG
Trigger: CCCAGTGTCACCCACACATCATCCGGTGGGCACAGG...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCAAACCAAGGTCTGAGTaGCCTTCTGACCACCTCATA +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLKPRSE*PSDHLI
Trigger: TATGAGGTGGTCAGAAGGTCACTCAGACCTTGGTTT...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGATGCCGTCGTCTGGCTaGGCGGGGCTGCGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMMPSSG*AGLRKG
Trigger: GCCCTTCCGCAGCCCCGCGCAGCCAGACGACGGCAT...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCGTTTTGCATGCCTTTTaGGTAGATTGGCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLVLHAF*VDWPLS
Trigger: GCTCAGAGGCCAATCTACGCAAAAGGCATGCAAAAC...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCACATCGTTCACGGCTTaGTTTCGCCTACGGAATTCT +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLTSFTA*FRLRNS
Trigger: AGAATTCCGTAGGCGAAAGCAAGCCGTGAACGATGT...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCCTGTATTTCTACCCTTaGTGCAGAGGGTTAATTAAA +
Preference number: 4 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGLYFYP*CRGLIK
Trigger: TTTAATTAACCCTCTGCAGCAAGGGTAGAAATACAG...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTGGTTGGACTGGTCGCTaGGGGCGCTCCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLGWTGR*GRSSSS
Trigger: ACTGGAGCTGGAGCGCCCCCAGCGACCAGTCCAACC...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTGGTCACAGGGGGTGTaGCCTGGTAAGCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNWSQGV*PGKHGQ
Trigger: CTGACCATGCTTACCAGGCCACACCCCCTGTGACCA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTGGCTCAGGGCTTCCTaGACCAGGCCAGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNWLRAS*TRPEHH
Trigger: ATGATGCTCTGGCCTGGTCCAGGAAGCCCTGAGCCA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAAGCCGCTGCTGCTGGTaGTGGAAGGCACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPESRCCW*WKARSR
Trigger: GCGGCTGCGTGCCTTCCAGCACCAGCAGCAGCGGCT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTCCAGTAGCCGCTGCTaGTGGTGCTGGAAGGCACGC +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLSSSRC*WCWKAR
Trigger: GCGTGCCTTCCAGCACCAGCAGCAGCGGCTACTGGA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGTGCGCATGCTGTCTCTaGTCTCCTGTGCCCACCGGA +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVCACCL*SPVPTG
Trigger: TCCGGTGGGCACAGGAGAGCAGAGACAGCATGCGCA...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTAGGACCGTGTGCGCATaGTGTCTCTGCTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSRTVCA*CLCSPV
Trigger: CACAGGAGAGCAGAGACAGCATGCGCACACGGTCCT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTGGCCACTGGGCAATCTaGCCATGGCTCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLGHWAI*PWLRAS
Trigger: GGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCC...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTGGGCTCCAGTTCCACTaGCAGCCTGCTGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLGLQFH*QPAVGA
Trigger: TGCTCCCACAGCAGGCTGGCAGTGGAACTGGAGCCC...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCGGACAGAGCCACTTCTaGATTTTACACTTAAACGGG +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLGQSHF*ILHLNG
Trigger: CCCGTTTAAGTGTAAAATGCAGAAGTGGCTCTGTCC...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAGTGGACGGGTTGGACTaGTCGCTGGGGGCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEVDGLD*SLGALQ
Trigger: CTGGAGCGCCCCCAGCGACCAGTCCAACCCGTCCAC...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACGAACTTGGCCGATCCTaGAATGGTCACAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNELGRS*NGHRGC
Trigger: ACACCCCCTGTGACCATTCCAGGATCGGCCAAGTTC...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTGCCTTTTGCGTAGATTaGCCTCTGAGCTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSAFCVD*PLSSLR
Trigger: CCGCAGGGAGCTCAGAGGCCAATCTACGCAAAAGGC...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGGAGTGTGGGGAGGCTaGCCAAGGGCTTTGGCACAA +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVGVWGG*PRALAQ
Trigger: TTGTGCCAAAGCCCTTGGCCAGCCTCCCCACACTCC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTGGAAGGGGGCTCCAGTaGAGTGAGGGACAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSGRGLQ*SEGQVL
Trigger: AAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCC...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCCTGGCCCTACTAAACTaGGAAATTCCTATACCTACA +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLLALLN*EIPIPT
Trigger: TGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAG...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTGGATACCTGCTGCAGTaGTCAGCACCTTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSGYLLQ*SAPSHS
Trigger: ACTGTGGGAAGGTGCTGAGCACTGCAGCAGGTATCC...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGAGGACAGGACCGTGTaGGCATGCTGTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVEDRTV*ACCLCS
Trigger: AGAGCAGAGACAGCATGCGCACACGGTCCTGTCCTC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGCCTTCCGACACTTTTTaGCCTCTCCCCTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVPSDTF*PLPWAS
Trigger: GGAAGCCCAGGGGAGAGGGCAAAAAGTGTCGGAAGG...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCAGTCTCCGAAAGTCTaGCGCTTCGAAGCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSQSPKV*RFEAVG
Trigger: GCCAACTGCTTCGAAGCGCCAGACTTTCGGAGACTG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCCAACGCGCCCCAGATaGATGGTTCGGATGTGTTTC +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSPTRPR*MVRMCF
Trigger: GAAACACATCCGAACCATCCATCTGGGGCGCGTTGG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTGCTGGCCAAGGGCTTTaGCACAAGGAGGCAATGTGT +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSAGQGL*HKEAMC
Trigger: ACACATTGCCTCCTTGTGCCAAAGCCCTTGGCCAGC...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 72 bp CAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTaGTCGCTCTCTGGAGAATGTCCTGTCAGTCACTAT +
Preference number: 4 (lower is better)
Translates to: QGLTPLPAGHSA*SLSGECPVSHY
Trigger: ATAGTGACTGACAGGACATTCTCCAGAGAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 72 bp TCCCCGAACAGTCAGGAGACTGTGAAAGGAGGGGCTTaGCTATCATCACAGGTGTTGGTCACATCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SPNSQETVKGGA*LSSQVLVTSQP
Trigger: TGGCTGTGATGTGACCAACACCTGTGATGATAGCAAAGCCCCTCCTTTCACAGTCTCCTGACTGTTCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCTTTAAGTCCTCTGACTaGAATGTGAAGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLFKSSD*NVKVIS
Trigger: GGAAATGACCTTCACATTTCAGTCAGAGGACTTAAA...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGACAGCTGGACTTCCTaGACTCAGCTTCGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVDSWTS*TQLRAE
Trigger: TTCAGCCCGAAGCTGAGTTCAGGAAGTCCAGCTGTC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACGTGCCAATTCTTGACTaGGTTGTGGCAGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNVPILD*VVAGRE
Trigger: CTCTCTACCTGCCACAACTCAGTCAAGAATTGGCAC...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCAATACCCATTCCATCTaGTCTGTATTTCTACCCTTG +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLNTHSI*SVFLPL
Trigger: CAAGGGTAGAAATACAGATCAGATGGAATGGGTATT...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACACTTGGCAACATGACTaGGTAACGGGTGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNTWQHD*VTGGLF
Trigger: AAAGAGCCCACCCGTTACTCAGTCATGTTGCCAAGT...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTCCAGGCTGTCACACTaGCTCCCACCCACCAATGCA +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLSRLSH*LPPTNA
Trigger: TGCATTGGTGGGTGGGAGGCAGTGTGACAGCCTGGA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCCCACCCCCAGGCATTaGACCTGTGGTTCAAATGTT +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSPTPRH*TCGSNV
Trigger: AACATTTGAACCACAGGTGCAATGCCTGGGGGTGGG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCCTCTTTTATTTTAGTTaGCCAGATAGTGCCGACATG +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLLFYFS*PDSADM
Trigger: CATGTCGGCACTATCTGGGCAACTAAAATAAAAGAG...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGAGTAGCCGCTGCTGCTaGTGCTGGAAGGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMSSRCC*CWKARS
Trigger: GCTGCGTGCCTTCCAGCACCAGCAGCAGCGGCTACT...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTCCACCGGATGATGTGTaGGTGACACTGGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLPPDDV*VTLGCL
Trigger: CAGGCATCCCAGTGTCACCCACACATCATCCGGTGG...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTGACTGTGCCTCTGGGTaGGGAGGACAGGACCGTGTG +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLDCASG*GGQDRV
Trigger: CACACGGTCCTGTCCTCCCCACCCAGAGGCACAGTC...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGACAGGTGACAAGCTCTaGCCGCCCAAGGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMTGDKL*PPKATG
Trigger: CCCAGTGGCCTTGGGCGGCCAGAGCTTGTCACCTGT...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCTGTGTTTCAAAGTTCTaGGATGGGGGATGGATTTTA +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLCVSKF*DGGWIL
Trigger: TAAAATCCATCCCCCATCCCAGAACTTTGAAACACA...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACAAGACCAGCCACCTGTaGCTTGGTGGTCTACTAGTT +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNKTSHL*LGGLLV
Trigger: AACTAGTAGACCACCAAGCCACAGGTGGCTGGTCTT...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGGAGAGGGAAGGAGTGTaGGGAGGCTGGCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQEREGV*GGWPRA
Trigger: AGCCCTTGGCCAGCCTCCCCACACTCCTTCCCTCTC...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTGCAGCAGTGAAATCTTaGCTCACTGCAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSAAVKS*LTATSA
Trigger: GGCAGAGGTTGCAGTGAGCCAAGATTTCACTGCTGC...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGTCAGCACCAAGAAGATaGGCAAGAGCCAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVSAPRR*ARARCP
Trigger: TGGACACCTGGCTCTTGCTCATCTTCTTGGTGCTGA...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACAATGCCTACCAGTTCTaGAGCAAGGCTTCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNNAYQF*SKASAV
Trigger: TACAGCAGAAGCCTTGCTTCAGAACTGGTAGGCATT...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTGGAAGACTAAGGTTTaGGCCAGGCCTTTAATGAGC +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNWKTKV*ARPLMS
Trigger: GCTCATTAAAGGCCTGGCTCAAACCTTAGTCTTCCA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCCCTTCTCGAGTTTATaGCATCTGGGGCCCTACAAA +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSPFSSL*HLGPYK
Trigger: TTTGTAGGGCCCCAGATGGCATAAACTCGAGAAGGG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTAGGGCACCTTGTTGGTaGCTGGAGCTGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLRAPCW*LELLTG
Trigger: GCCTGTCAGCAGCTCCAGGCACCAACAAGGTGCCCT...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTCTGGGGGCTGCAGGCTaGACCTGTCTGTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLLGAAG*TCLCTA
Trigger: AGCTGTACACAGACAGGTGCAGCCTGCAGCCCCCAG...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGCGGAAGGCACGAGGCTaGTCTTTGCCAGCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRRKARG*SLPAPH
Trigger: ATGAGGGGCTGGCAAAGAGCAGCCTCGTGCCTTCCG...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTACTGCAACCTCTGCCTaGAGTTTCAAGGGATTCTCC +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSTATSA*SFKGFS
Trigger: GGAGAATCCCTTGAAACTGCAGGCAGAGGTTGCAGT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTTTCTTTTCCTGGGAATaGGCTCGTCGAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSFFSWE*ARRRAG
Trigger: ACCTGCTCTTCGACGAGCCCATTCCCAGGAAAAGAA...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGTGGCCGATCCTGGAATaGTCACAGGGGGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRWPILE*SQGVWP
Trigger: AGGCCACACCCCCTGTGACCATTCCAGGATCGGCCA...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGTGGGCAATCTGCCCATaGCTCAGGGCTTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRWAICP*LRASWT
Trigger: GGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCA...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACGCTCAGCACTACTTATaGGGTATATATCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNAQHYL*GIYLGV
Trigger: CACCCCCAGATATATACCCCATAAGTAGTGCTGAGC...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGGCAGCCCTGCACTCTTaGCCGGAGGTACTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRAALHS*PEVLPF
Trigger: GAAGGGAAGTACCTCCGGCCAAGAGTGCAGGGCTGC...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTGGTTCAAGACTACTCTaGGTTGGCCTTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLGSRLL*VGLGGG
Trigger: CCCACCTCCAAGGCCAACCCAGAGTAGTCTTGAACC...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGTGTCCCCTCCTAAGGTaGAACCCAGCTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVCPLLR*NPAHIP
Trigger: AGGAATGTGAGCTGGGTTCCACCTTAGGAGGGGACA...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 72 bp TATTTTGGGACCAGAATCCATTGTTTTGCATGCCTTTaGCGTAGATTGGCCTCTGAGCTCCCTGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: YFGTRIHCFACL*RRLASELPAVA
Trigger: GGCCACCGCAGGGAGCTCAGAGGCCAATCTACGCAAAAGGCATGCAAAACAATGGATTCTGGTCCCAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTCTTATTTATAGGGCTTaGCGACTCCCCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLLIYRA*RLPSPH
Trigger: GTGGGGAGAGGGGAGTCGTCAAGCCCTATAAATAAG...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTGAATCCCCACAGGTATaGGGAACAGGAACAGTCCGT +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLESPQV*GTGTVR
Trigger: ACGGACTGTTCCTGTTCCTCATACCTGTGGGGATTC...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGACTACTGACCTCAAGTaGTCCATCTGCCTTGGACTC +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVTTDLK*SICLGL
Trigger: GAGTCCAAGGCAGATGGATCACTTGAGGTCAGTAGT...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGGTCTCTGCTCTCCTGTaGCCACCGGATGATGTGTGG +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRVSALL*PPDDVW
Trigger: CCACACATCATCCGGTGGGCACAGGAGAGCAGAGAC...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGGCCTGCTGGCCACTCTaGTTTGTCGCTCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRACWPL*FVALWR
Trigger: TCTCCAGAGAGCGACAAAGCAGAGTGGCCAGCAGGC...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTAGGTCATTCTCTCCTTaGTTCAGGCAGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLRSFSP*FRQLLP
Trigger: TGGGAGCAGCTGCCTGAAGCAAGGAGAGAATGACCT...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGTTCAAGGGATTCTCCTaGCTCAGCCTCTCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVFKGFS*LSLSSS
Trigger: GCTACTTGAGAGGCTGAGGCAGGAGAATCCCTTGAA...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGATCAGTGGTGCTGCATaGGGGGTGACAGGACACCAG +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQISGAA*GVTGHQ
Trigger: CTGGTGTCCTGTCACCCCCCATGCAGCACCACTGAT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCAACTTGCACGATCAGTaGTGTATATTGGAATTCATA +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLNLHDQ*CILEFI
Trigger: TATGAATTCCAATATACACCACTGATCGTGCAAGTT...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGAGCTTCAGAGGCTCCTaGCAGCCTTCTCGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMSFRGS*QPSRKA
Trigger: TGCCTTCCGAGAAGGCTGCCAGGAGCCTCTGAAGCT...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCAACTATTCTAGTGTCTaGTTATTCCAGAAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLNYSSV*LFQKAY
Trigger: ATAGGCTTTCTGGAATAACCAGACACTAGAATAGTT...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTCAAGGAGCATGGCTGTaGAGCAGTCAGGTGAAAGGT +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLQGAWL*SSQVKG
Trigger: ACCTTTCACCTGACTGCTCCACAGCCATGCTCCTTG...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCGATATCAGACTAGATTaGCAACACCATATTCATTGT +
Preference number: 4 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLDIRLD*QHHIHC
Trigger: ACAATGAATATGGTGTTGCCAATCTAGTCTGATATC...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 72 bp GGGAGGGTAATCTTTCAATGGCAAATTCACTGGGGCTaGCCAAGATGGGGGAAAGCAAGACTGGTAGCTAGA +
Preference number: 4 (lower is better)
Translates to: GRVIFQWQIHWG*PRWGKARLVAR
Trigger: TCTAGCTACCAGTCTTGCTTTCCCCCATCTTGGCAAGCCCCAGTGAATTTGCCATTGAAAGATTACCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGATTGCCAGGAAATGCTaGAGCTGCTGCCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQIARKC*SCCHWG
Trigger: CCCCCAATGGCAGCAGCTTCAGCATTTCCTGGCAAT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGTTCTCTACCTCTTCTaGAATCAGTCAGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVVLYLF*NQSVVE
Trigger: CTCCACCACTGACTGATTTCAGAAGAGGTAGAGAAC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGGGTAACGAAGACTCATaGGGCCGGATGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRGNEDS*GRMERE
Trigger: TTCCCTCTCCATCCGGCCTCATGAGTCTTCGTTACC...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGAAAGCTTTCTACCAATaGCCAAGGAGGTTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVKAFYQ*PRRFPE
Trigger: TTCGGGGAACCTCCTTGGTCATTGGTAGAAAGCTTT...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTGCACTCAATGACATGTaGATGCCTGTCATTTCCACA +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSALNDM*MPVIST
Trigger: TGTGGAAATGACAGGCATTCACATGTCATTGAGTGC...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACATCCATTGTTTTGCATaGCTTTTGCGTAGATTGGCC +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNIHCFA*LLRRLA
Trigger: GGCCAATCTACGCAAAAGGCATGCAAAACAATGGAT...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGCCTGACACTGGCTTTTaGCAACCAAGGGAGAAAACT +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVPDTGF*QPREKT
Trigger: AGTTTTCTCCCTTGGTTGGCAAAAGCCAGTGTCAGG...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACACATGGATTCAGCAGTaGCAACTAATTCAGAACCCA +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNTWIQQ*QLIQNP
Trigger: TGGGTTCTGAATTAGTTGGCACTGCTGAATCCATGT...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGTTCACACAGGTCAGTaGTACAGAAGATGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVVHTGQ*YRRCGR
Trigger: TCGACCACATCTTCTGTAGCACTGACCTGTGTGAAC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTCCACCTCATAAGAGCTaGCCAACGGGTGTATGGCTG +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLPPHKS*PTGVWL
Trigger: CAGCCATACACCCGTTGGGCAGCTCTTATGAGGTGG...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGAAATCTTGGCTCACTaGAACCTCTGCCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVEILAH*NLCLQF
Trigger: AAACTGCAGGCAGAGGTTGCAGTGAGCCAAGATTTC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGGGTCCCAGCCATCTGTaGCCAAAACATAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRGPSHL*PKHRKG
Trigger: CCCCTTCCTATGTTTTGGGCACAGATGGCTGGGACC...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACGCTCAAGGAGACAGATaGAGCGAGTGTTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNAQGDR*SECFLF
Trigger: AAAAAGAAAACACTCGCTCCATCTGTCTCCTTGAGC...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGCGCGCCCCAGATGGATaGTTCGGATGTGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQRAPDG*FGCVSG
Trigger: TCCAGAAACACATCCGAACCATCCATCTGGGGCGCG...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTGGGAAGAGCTTCTTATaGATCCAAGGAAGACTCCTA +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSGKSFL*IQGRLL
Trigger: TAGGAGTCTTCCTTGGATCCATAAGAAGCTCTTCCC...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGTCTGAAATCAGTCAGTaGTGGAGTCTGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVSEISQ*WSLERR
Trigger: CCTTCTCTCCAGACTCCACCACTGACTGATTTCAGA...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCATTTAACATTCCTATaGCTGATCCCATGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSHLTFL*LIPCPL
Trigger: CAGGGGACATGGGATCAGCCATAGGAATGTTAAATG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAACACCACTGCCTGCTaGCCACTCTGCTTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQNTTAC*PLCFVA
Trigger: AGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGCAATGTGCCAGAAGCTaGCAAGGAGCATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMQCARS*QGAWLW
Trigger: CCACAGCCATGCTCCTTGCCAGCTTCTGGCACATTG...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGCATTTTAATGGACACTaGTGTGCATGGCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVHFNGH*CAWQLL
Trigger: GAGTAGCTGCCATGCACATCAGTGTCCATTAAAATG...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAAACTCAGCTTCGGGCTaGAGTCTGCTGGTGATTTCC +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPENSASG*SLLVIS
Trigger: GGAAATCACCAGCAGACTTCAGCCCGAAGCTGAGTT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGTGGAGAGAAGGAAAATaGCCCATTAACCTGGCTACA +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVWREGK*PINLAT
Trigger: TGTAGCCAGGTTAATGGGTCATTTTCCTTCTCTCCA...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTCAGTCACTATGAAATaGCTTCTTTGGAGAGAGATG +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNSVTMK*LLWREM
Trigger: CATCTCTCTCCAAAGAAGTCATTTCATAGTGACTGA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACATTCTAAAGCCTATTTaGAACCAAGGTCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNILKPI*NQGLSD
Trigger: GTCACTCAGACCTTGGTTTCAAATAGGCTTTAGAAT...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAATTGCACTTGGCAACATaGCTGAGTAACGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPELHLAT*LSNGWA
Trigger: AGCCCACCCGTTACTCAGTCATGTTGCCAAGTGCAA...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGAATAGCCACACTGACTaGGCCTTACATCCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVNSHTD*ALHPSY
Trigger: ATAACTGGGATGTAAGGCTCAGTCAGTGTGGCTATT...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGGTGACCGGAGGAGATTaGCAGGAAATGCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMVTGGD*QEMLKL
Trigger: CAGCTTCAGCATTTCCTGGCAATCTCCTCCGGTCAC...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACCCCATAATATGTGAATaGACAGATTGTGGATGTTGC +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNPIICE*TDCGCC
Trigger: GCAACATCCACAATCTGTGCATTCACATATTATGGG...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAACTTAACACCACTGCCTaGTGGCCACTCTGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPELNTTA*WPLCFV
Trigger: GACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAG...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGCTTGCTTCAGGCAGCTaGTCCCAGAGGAGAAAATGG +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQLASGS*SQRRKW
Trigger: CCATTTTCTCCTCTGGGAGCAGCTGCCTGAAGCAAG...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGATCACAACCTCATGTaGCTGCTAGTTCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVDHNLM*LLVLHS
Trigger: ACTGTGAAGAACTAGCAGGCACATGAGGTTGTGATC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTCTGAAGCAAGGCTTCTaGTGTATCAGAGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLLKQGF*CIRGEA
Trigger: TGCTTCACCTCTGATACAGCAGAAGCCTTGCTTCAG...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCCAATTCTGCTTTCATaGTCTGTAATTGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSPILLS*SVIVGR
Trigger: TCTGCCCACAATTACAGAGCATGAAAGCAGAATTGG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGAATCTATGTACAATGTaGCAGAAGCTGGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVNLCTM*QKLARS
Trigger: GCTCCTTGCCAGCTTCTGGCACATTGTACATAGATT...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGTCACATCTTCCTCCATaGCCAAGGAAAACACGTGTT +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVSHLPP*PRKTRV
Trigger: AACACGTGTTTTCCTTGGCCATGGAGGAAGATGTGA...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGAAGTACACAGAGCCGTaGGCTAGCAGGCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRKYTEP*ASRQKA
Trigger: TGCTTTCTGCCTGCTAGCCCACGGCTCTGTGTACTT...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGAAAAGGGCACCTTGTTaGTGCCTGGAGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMKRAPC*CLELLT
Trigger: TGTCAGCAGCTCCAGGCACCAACAAGGTGCCCTTTT...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTTCCCATTTTGGTTCCTaGTCCTACGATAGATATACC +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSSHFGS*SYDRYT
Trigger: GGTATATCTATCGTAGGACCAGGAACCAAAATGGGA...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTGTACAGCTTCTCTTTaGTCTGCACAGTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLCTASL*SAQCWP
Trigger: TGGCCAACACTGTGCAGACCAAAGAGAAGCTGTACA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGCCTGGACTGAATAGATaGTTTGAGAACATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVPGLNR*FENMVG
Trigger: ACCCACCATGTTCTCAAACCATCTATTCAGTCCAGG...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAATGGGGCTTGCCAAGATaGGGGAAAGCAAGACTGGTA +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEWGLPR*GKARLV
Trigger: TACCAGTCTTGCTTTCCCCCATCTTGGCAAGCCCCA...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTAGGGTAATCTTTCAATaGCAAATTCACTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSRVIFQ*QIHWGL
Trigger: CAAGCCCCAGTGAATTTGCCATTGAAAGATTACCCT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGGATGTTTCCCAACAGTaGCAGCTGGACTTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRDVSQQ*QLDFLN
Trigger: GTTCAGGAAGTCCAGCTGTCACTGTTGGGAAACATC...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTTTTGTTGATCTAACATaGCTTTCTGAACAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSFVDLT*LSEQVG
Trigger: CCCTACCTGTTCAGAAAGTCATGTTAGATCAACAAA...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGACTTGTTTAAACAGGTaGCAAGCTCTGGCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRTCLNR*QALAAQ
Trigger: TTGGGCGGCCAGAGCTTGTCACCTGTTTAAACAAGT...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGGGGTCTGTCTGCACCTaGAGCCAGAAAAGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQGSVCT*SQKRKY
Trigger: GTACTTTCTTTTCTGGCTTCAGGTGCAGACAGACCC...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTCAAAAACCCTGTTCATaGTGTAGGAGTCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLQKPCS*CRSLAK
Trigger: TTTGGCCAGACTCCTACATCATGAACAGGGTTTTTG...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAACAGTCAGGAGACTGTaGAAGGAGGGGCTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPETVRRL*KEGLCY
Trigger: ATAGCAAAGCCCCTCCTTTCACAGTCTCCTGACTGT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTGTGGAGCAGTCAGGTaGAAGGTTTATCAACCTGAA +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLCGAVR*KVYQPE
Trigger: TTCAGGTTGATAAACCTTTCACCTGACTGCTCCACA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAGTGTTTCTGGATACCTaGTGCAGTGCTCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEVFLDT*CSAQHL
Trigger: AAGGTGCTGAGCACTGCAGCAGGTATCCAGAAACAC...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAAAAGATGCCCAGAGTaGTGCGCTGTCTTGCAACAC +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQKRCPE*CAVLQH
Trigger: GTGTTGCAAGACAGCGCAGCACTCTGGGCATCTTTT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGCAGGGCACTCCCCTATaGCTCACAAATGTCAGTACT +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMQGTPL*LTNVST
Trigger: AGTACTGACATTTGTGAGGCATAGGGGAGTGCCCTG...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTCAAGGAGGCAATGTGTaGTCGCTTCAAGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLQGGNV*SLQASE
Trigger: CTCTGAAGCTTGAAGCGAGCACACATTGCCTCCTTG...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGCCTGCTGGGACAGTTTaGAGTTCTCTACCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRPAGTV*SSLPLL
Trigger: CAGAAGAGGTAGAGAACTCCAAACTGTCCCAGCAGG...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAACCACCTGTGGCTTGGTaGTCTACTAGTTATTCCACG +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEPPVAW*STSYST
Trigger: CGTGGAATAACTAGTAGACCACCAAGCCACAGGTGG...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGCAGCCACCTGTGGCTTaGTGGTCTACTAGTTATTCC +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRQPPVA*WSTSYS
Trigger: GGAATAACTAGTAGACCACCAAGCCACAGGTGGCTG...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTTTTCATCTGCAATATaGTTATGTTCGGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNFSSAI*LCSGRN
Trigger: ATTCCTGCCCGAACATAACCATATTGCAGATGAAAA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTAGCCAAGCCTGTACATaGCTTTCCCTAACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLSQACT*LSLTLC
Trigger: GCACAGAGTTAGGGAAAGCCATGTACAGGCTTGGCT...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTGGTTTGAGAACATGGTaGGTCCCTGGGTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLGLRTW*VPGSSY
Trigger: GTAAGAAGACCCAGGGACCCACCATGTTCTCAAACC...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGGATGGTTTGAGAACATaGTGGGTCCCTGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQDGLRT*WVPGSS
Trigger: AGAAGACCCAGGGACCCACCATGTTCTCAAACCATC...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTATCATCACAGGTGTTaGTCACATCACAGCCATCGA +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLYHHRC*SHHSHR
Trigger: TCGATGGCTGTGATGTGACCAACACCTGTGATGATA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 72 bp ACTGTGAAAGGAGGGGCTTTGCTATCATCACAGGTGTaGGTCACATCACAGCCATCGATTTCCAATAAGCAG +
Preference number: 4 (lower is better)
Translates to: TVKGGALLSSQV*VTSQPSISNKQ
Trigger: CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAAAGCCCCTCCTTTCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGAGTTTCTGTTCGGCTTaGATCTGGGATGGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRSFCSA*IWDGES
Trigger: ACTTTCCCCATCCCAGATTCAAGCCGAACAGAAACT...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAATCTAACATGACTTTCTaGACAGGTAGGGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPESNMTF*TGRAMW
Trigger: CCACATGGCCCTACCTGTTCAGAAAGTCATGTTAGA...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGCTCAACCTTTGCAAGTaGATGCTGCACTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRLNLCK*MLHFGV
Trigger: GACTCCAAAGTGCAGCATTCACTTGCAAAGGTTGAG...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGACAACTGTGGAATGTaGAATCCACTTTTCCCAATA +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVDNCGM*NPLFPI
Trigger: TATTGGGAAAAGTGGATTTCACATTCCACAGTTGTC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAACTGGTCTTGAACTACTaGCCTCAAGTGATCCATCTG +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPELVLNY*PQVIHL
Trigger: CAGATGGATCACTTGAGGTCAGTAGTTCAAGACCAG...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAATCCGCTGTATATCCCTaGGGGGTATATTCACACTCT +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPESAVYP*GVYSHS
Trigger: AGAGTGTGAATATACCCCTCAGGGATATACAGCGGA...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTATGGGTAGTTTATCATaGAACTCCGCTGTATATCCC +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLMGSLS*NSAVYP
Trigger: GGGATATACAGCGGAGTTTCATGATAAACTACCCAT...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGCATCCTGACATATACTaGTCCAAGAAGTCAAATGGA +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVHPDIY*SKKSNG
Trigger: TCCATTTGACTTCTTGGAGCAGTATATGTCAGGATG...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGGCTTTGCTCCAGGACTaGTCCATAGCAAAGATCTCT +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMALLQD*SIAKIS
Trigger: AGAGATCTTTGCTATGGAGCAGTCCTGGAGCAAAGC...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGTGAAAACAGAGATTTaGAAGACGCCTCATCTCAAA +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVVKTEI*KTPHLK
Trigger: TTTGAGATGAGGCGTCTTGCAAATCTCTGTTTTCAC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAGCTTCTCTTTGGTCTaGACAGTGTTGGCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQSFSLV*TVLAKS
Trigger: ACTCTTGGCCAACACTGTGCAGACCAAAGAGAAGCT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGATAGGCGTGAACCACTaGATCTGGCCAATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMIGVNH*IWPILV
Trigger: AACCAGAATTGGCCAGATGCAGTGGTTCACGCCTAT...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAAATTCACTGGGGCTTaGCAAGATGGGGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQKFTGA*QDGGKQ
Trigger: TTGCTTTCCCCCATCTTGGCAAGCCCCAGTGAATTT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTCAATGACATGTGAATaGCTGTCATTTCCACACGAG +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLSMTCE*LSFPHE
Trigger: CTCGTGTGGAAATGACAGGCATTCACATGTCATTGA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTCATGCAGTTTTGTTTaGTTGTTAATCCAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNSCSFV*LLIQCY
Trigger: GTAACACTGGATTAACAAGCAAACAAAACTGCATGA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAACTAATAGCTCTACCATaGTTCAGTGTGGGGCCATTC +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPELIALP*FSVGPF
Trigger: GAATGGCCCCACACTGAACCATGGTAGAGCTATTAG...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGGAAGAGAAAAACCTCTaGTCCAGGACTGTACCCTGT +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMEEKNL*SRTVPC
Trigger: ACAGGGTACAGTCCTGGACCAGAGGTTTTTCTCTTC...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGTTGGCTCAGCTAAGCTaGAGCTCAGCACTACTTATG +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRLAQLS*SSALLM
Trigger: CATAAGTAGTGCTGAGCTCCAGCTTAGCTGAGCCAA...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGACTCTGGGTTGGCCTTaGAGGTGGGTAATGTTGATT +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRTLGWP*RWVMLI
Trigger: AATCAACATTACCCACCTCCAAGGCCAACCCAGAGT...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGACATTAACAACAGCCTaGCCTCTAGCTCAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMTLTTA*PLAQAD
Trigger: ATCTGCCTGAGCTAGAGGCCAGGCTGTTGTTAATGT...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 72 bp CCTCTTTGCCTTATCCACATCAATCATTTACAGAACTaGCCTGGTCCTTCTGAGGCACTGACATTTGCAACC +
Preference number: 4 (lower is better)
Translates to: PLCLIHINHLQN*PGPSEALTFAT
Trigger: GGTTGCAAATGTCAGTGCCTCAGAAGGACCAGGCAAGTTCTGTAAATGATTGATGTGGATAAGGCAAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTTTTGTGTCACATCCCTaGAAGAAGCATCGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLFVSHP*KKHRGL
Trigger: TAAGCCTCGATGCTTCTTTCAGGGATGTGACACAAA...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTAAGTCCCATAATATGTaGATGCACAGATTGTGGATG +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLKSHNM*MHRLWM
Trigger: CATCCACAATCTGTGCATTCACATATTATGGGACTT...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTAAGTGTGTCTTAGTGTaGCACCAGAAACAGCAGACT +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLKCVLV*HQKQQT
Trigger: AGTCTGCTGTTTCTGGTGTCACACTAAGACACACTT...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTCTCATTCATATTCATaGATCCTGCTCTGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLSHSYS*ILLCFH
Trigger: GTGGAAACAGAGCAGGATTCATGAATATGAATGAGA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAAACTCAGTCACTTTCTaGTCACAACCTCATGTGCCT +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPENSVTF*SQPHVP
Trigger: AGGCACATGAGGTTGTGATCAGAAAGTGACTGAGTT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGCAACCCAACTGCCTGTaGATGACTTTACACTCAAGA +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQQPNCL*MTLHSR
Trigger: TCTTGAGTGTAAAGTCATTCACAGGCAGTTGGGTTG...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGATGGCAACGGCGCTATaGTTCTTTTCCATCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQMATAL*FFSIRR
Trigger: TCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCAT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGCAAATAGCTCCGAGTTaGCATTTGTGTCACATCCCT +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQQIAPS*HLCHIP
Trigger: AGGGATGTGACACAAATGGCAACTCGGAGCTATTTG...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTAAATCTGTGGTTACCTaGTTTCGGAACCATAGCTTT +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLKSVVT*FRNHSF
Trigger: AAAGCTATGGTTCCGAAAGCAGGTAACCACAGATTT...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGGTGTTTTCTTTTTCATaGTCAAGGATCCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRVFSFS*SRIRLA
Trigger: AGCCAGCCGGATCCTTGACCATGAAAAAGAAAACAC...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAACTAAAGCAAACCTGCTaGGACAGTTTGGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPELKQTC*DSLEFS
Trigger: AGAGAACTCCAAACTGTCCCAGCAGGTTTGCTTTAG...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGACGAAGCCCAATAAATaGAACATAGTGCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMTKPNK*NIVQAL
Trigger: CAGGGCTTGCACTATGTTCCATTTATTGGGCTTCGT...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTAGTTATTCCACGCCTTaGTCCAGGGAATATGTGTCT +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLSYSTP*SREYVS
Trigger: AGACACATATTCCCTGGACCAAGGCGTGGAATAACT...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAATTTCAGCTAGTGTGGTaGAGAGAAGTCCATATCTGC +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEFQLVW*REVHIC
Trigger: GCAGATATGGACTTCTCTCCACCACACTAGCTGAAA...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTTTATATGTACAATTCTaGCCACTTTTCTCTCAACCT +
Preference number: 4 (lower is better)
Translates to: ARRALRHSERISYLPCHSLYVQF*PLFSQP
Trigger: AGGTTGAGAGAAAAGTGGCCAGAATTGTACATATAA...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGCTGTTTCCTGGTTCTTaGGAACTCAGTCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQLFPGS*ELSHFL
Trigger: CAGAAAGTGACTGAGTTCCCAAGAACCAGGAAACAG...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 72 bp AACAATGGAGACATTCCAAGGAGTGAAAACAGAGATTaGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: NNGDIPRSENRD*QDASSQRLGAK
Trigger: CTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCTCTGTTTTCACTCCTTGGAATGTCTCCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTTCTTGCAACACATCCTaGCATATACTGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLSCNTS*HILLQE
Trigger: TTCTTGGAGCAGTATATGTCAGGATGTGTTGCAAGA...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGGTATTGCTGGTGCTGTaGCTAGTACTGATTGGTAAT +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRVLLVL*LVLIGN
Trigger: ATTACCAATCAGTACTAGTCACAGCACCAGCAATAC...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTTCCTGTCAGTCACTATaGAATGACTTCTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLSCQSL*NDFFGE
Trigger: CTCTCCAAAGAAGTCATTTCATAGTGACTGACAGGA...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTATTTCTGCATGGTTCTaGTTGTCTAGAGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLISAWF*LSRAEC
Trigger: ACACTCAGCTCTAGACAATCAGAACCATGCAGAAAT...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGCTGCTGTATCAGAGGTaGAGCAGTGGTAATTTTACT +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMLLYQR*SSGNFT
Trigger: AGTAAAATTACCACTGCTTCACCTCTGATACAGCAG...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAACATTTGGTGGTCTCTTaGTGCCCATTTCAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEHLVVS*CPFQVD
Trigger: ATCTACTTGAAATGGGCATCAAGAGACCACCAAATG...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAAAACTAGTTATAGCTaGTCCAAGCTGGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQKTSYS*SKLGSQ
Trigger: CTGAGAACCCAGCTTGGAGCAGCTATAACTAGTTTT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGTTCAGAACCCAGGGCTaGTTTCAAAAGTGTGTCTTA +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQFRTQG*FQKCVL
Trigger: TAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAA...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTCATATTCATGAATCCTaGTCTGTTTCCACTCATTTG +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLHIHES*SVSTHL
Trigger: CAAATGAGTGGAAACAGAGCAGGATTCATGAATATG...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGTATTTCTACCCTTGCTaGAGAGGGTTAATTAAAAAG +
Preference number: 4 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVYFYPC*RGLIKK
Trigger: CTTTTTAATTAACCCTCTGCAGCAAGGGTAGAAATA...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTAATTCTTTCTTTTCCTaGGAATGGGCTCGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLNSFFS*EWARRR
Trigger: TCTTCGACGAGCCCATTCCCAGGAAAAGAAAGAATT...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGGAATTCATAGCTTTCTaGGTGGCCTGTAAGGAGTAT +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMEFIAF*VACKEY
Trigger: ATACTCCTTACAGGCCACCCAGAAAGCTATGAATTC...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAGTGCTACAGAAGATGTaGTCGATAGCAATTCTACAG +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEVLQKM*SIAILQ
Trigger: CTGTAGAATTGCTATCGACCACATCTTCTGTAGCAC...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGGGAAATGAGACTCATTaGGTTCAAAACCGTACAGCA +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQGNETH*VQNRTA
Trigger: TGCTGTACGGTTTTGAACCCAATGAGTCTCATTTCC...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAATCCTGTTATTGTCATaGCAACGGCGCTATGATTCT +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEILLLS*QRRYDS
Trigger: AGAATCATAGCGCCGTTGCCATGACAATAACAGGAT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAATATGATCCACATTCCTaGGTTAGTTTACACCCAGGA +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEYDPHS*VSLHPG
Trigger: TCCTGGGTGTAAACTAACCCAGGAATGTGGATCATA...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 72 bp ATTTTCATCTGCAATATGGTTATGTTCGGGCAGGAATaGTCTAATAAAAGGGCACCTTGTTGGTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: IFICNMVMFGQE*SNKRAPCWCLE
Trigger: CTCCAGGCACCAACAAGGTGCCCTTTTATTAGACAATTCCTGCCCGAACATAACCATATTGCAGATGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 72 bp AGGCTGACTCAGGTTCAAGACTACTCTGGGTTGGCCTaGGAGGTGGGTAATGTTGATTTTAAATATTCCTAT +
Preference number: 4 (lower is better)
Translates to: RLTQVQDYSGLA*EVGNVDFKYSY
Trigger: ATAGGAATATTTAAAATCAACATTACCCACCTCCAAGGCCAACCCAGAGTAGTCTTGAACCTGAGTCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGTTTTCCAGAGGCATTTaGACATCACCTTCATGGAAT +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMFSRGI*TSPSWN
Trigger: ATTCCATGAAGGTGATGTTCAAATGCCTCTGGAAAA...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTAAACTCGAGTGCTCTTaGGATTTAATGGAGGACATT +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLKLECS*DLMEDI
Trigger: AATGTCCTCCATTAAATCTCAAGAGCACTCGAGTTT...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTTCTCAGCTTTGCTTTTaGTGTTATCTGCATACTTGG +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLSQLCF*CYLHTW
Trigger: CCAAGTATGCAGATAACATCAAAAGCAAAGCTGAGA...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGTGTTGGCCAAGAGTTTaGGTTAGTTGTCAACACTTA +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQCWPRV*VSCQHL
Trigger: TAAGTGTTGACAACTAACTCAAACTCTTGGCCAACA...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAGTACAGGTCAACAATaGTATCAGACTAGATTGGCA +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQSTGQQ*YQTRLA
Trigger: TGCCAATCTAGTCTGATATCATTGTTGACCTGTACT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAACAGATTGTGGATGTTaGACTGTAGAACCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPETDCGC*TVEPPY
Trigger: ATAAGGAGGTTCTACAGTGCAACATCCACAATCTGT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAATTTGCAAGTGAATGCTaGACTTTGGAGTCTGATGAA +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEFASEC*TLESDE
Trigger: TTCATCAGACTCCAAAGTGCAGCATTCACTTGCAAA...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTATTATAACAATTATATaGTGCAGGAGCCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: RFARRLISKTRSQACTWLIITII*CRSHFL
Trigger: AAGGAAGTGGCTCCTGCAGCATATAATTGTTATAAT...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAACATTGGACAGCATTaGCACCTAGCTTTTGAGTTA +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQNIGQH*HLAFEL
Trigger: TAACTCAAAAGCTAGGTGGCAATGCTGTCCAATGTT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGAAGCCTATGTTTAAATaGCTGATCACTGTCCAACCA +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRKPMFK*LITVQP
Trigger: TGGTTGGACAGTGATCAGCCATTTAAACATAGGCTT...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTACTGTAAACATTTGGTaGTCTCTTGATGCCCATTTC +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLTVNIW*SLDAHF
Trigger: GAAATGGGCATCAAGAGACCACCAAATGTTTACAGT...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGAACTGTACAGCATTATaGAATGGTTTTGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMNCTAL*NGFGKA
Trigger: AGCTTTGCCAAAACCATTTCATAATGCTGTACAGTT...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGACACCATCAGGACTCTaGTGTAAGATAGAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMTPSGL*CKIEFK
Trigger: TTTAAACTCTATCTTACATCAGAGTCCTGATGGTGT...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR TCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTAACTACCAAATTGGCTaGAATTTAGGGATTAGGGAT +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLNYQIG*NLGIRD
Trigger: ATCCCTAATCCCTAAATTTCAGCCAATTTGGTAGTT...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTGTGCTCTTCCTACTTTaGATAGGTATAGGAGAAATA +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLVLFLL*IGIGEI
Trigger: TATTTCTCCTATACCTATGCAAAGTAGGAAGAGCAC...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGCACAAATGTCAGTACTaGCCAGTTCACATAAATTTG +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRHKCQY*PVHINL
Trigger: CAAATTTATGTGAACTGGGCAGTACTGACATTTGTG...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGTATAAAAAGACACAATaGCCCTTCCCCAATAACTTC +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQYKKTQ*PFPNNF
Trigger: GAAGTTATTGGGGAAGGGGCATTGTGTCTTTTTATA...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGTTTCTTCTACTTAAATaGTTCCAGAGGACCAGTGTA +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRFLLLK*FQRTSV
Trigger: TACACTGGTCCTCTGGAAGCATTTAAGTAGAAGAAA...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTTTCAAAGTTCTGGGATaGGGGATGGATTTTATACTT +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLFKVLG*GMDFIL
Trigger: AAGTATAAAATCCATCCCCCATCCCAGAACTTTGAA...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAAGAATATTTCTCCCATaGCCTATAAGCATACCTGTT +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPERIFLP*PISIPV
Trigger: AACAGGTATGCTTATAGGCCATGGGAGAAATATTCT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGATCTATATTCAAGTCTaGCATGAGAATGATATCTGG +
Preference number: 4 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQIYIQV*HENDIW
Trigger: CCAGATATCATTCTCATGGCAGACTTGAATATAGAT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR GCA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTAGAAATCTCAGGCATTaGCAATGTCATTTAAATTGC +
Preference number: 4 (lower is better)
Translates to: LERRRDPREATFSSVVLLRNLRH*QCHLNC
Trigger: GCAATTTAAATGACATTGGCAATGCCTGAGATTTCT...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGCATCAAACGAATGTCTaGTTAATTTGGCACTTCATT +
Preference number: 4 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRHQTNV*LIWHFI
Trigger: AATGAAGTGCCAAATTAACCAGACATTCGTTTGATG...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAGTATATCATTGGATATaGGCTTTTTCAAAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEVYHWI*AFSKSV
Trigger: GACTGACTTTGAAAAAGCCCATATCCAATGATATAC...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CCA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGTGTTATCTGCATACTTaGCTAATTAGGCTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMCYLHT*LIRLAF
Trigger: AAAAGCTAGCCTAATTAGCCAAGTATGCAGATAACA...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 72 bp TTATATGTACAATTCTGGCCACTTTTCTCTCAACCTTaGCAAGTGAATGCTGCACTTTGGAGTCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LYVQFWPLFSQP*QVNAALWSLMK
Trigger: CTTCATCAGACTCCAAAGTGCAGCATTCACTTGCAAAGGTTGAGAGAAAAGTGGCCAGAATTGTACATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 72 bp CATTTGCAACCTCTCCTATATAGAATTAGGAATCTTTaGGAAATGAGACTCATTGGGTTCAAAACCGTACAG +
Preference number: 4 (lower is better)
Translates to: HLQPLLYRIRNL*EMRLIGFKTVQ
Trigger: CTGTACGGTTTTGAACCCAATGAGTCTCATTTCCAAAAGATTCCTAATTCTATATAGGAGAGGTTGCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
3UTR CAA 72 bp TCCAATGAAATATTCGTTCACTTCATGCAGTTTTGTTaGCTTGTTAATCCAGTGTTACTAGAACATCCACCT +
Preference number: 4 (lower is better)
Translates to: SNEIFVHFMQFC*LVNPVLLEHPP
Trigger: AGGTGGATGTTCTAGTAACACTGGATTAACAAGCAAACAAAACTGCATGAAGTGAACGAATATTTCATTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS TCA 90 bp CCTCGTCGATGCCGTCGTCTGGCTGCGCGGGGCTGCGGAAGGGCTTaGAGCTGTCAGCCGAGAGCGGCGGCGACGGCGTGGACGGGTTGG +
Preference number: 5 (lower is better)
Translates to: PRRCRRLAARGCGRA*SCQPRAAATAWTGW
Trigger: CCAACCCGTCCACGCCGTCGCCGCCGCTCTCGGCTGACAGCTTCAAGCCCTTCCGCAGCCCCGCGCAGCCAGACGACGGCATCGACGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS CCA 90 bp CAGCCGAGAGCGGCGGCGACGGCGTGGACGGGTTGGACTGGTCGCTaGGGGCGCTCCAGCTCCAGTAGCCGCTGCTGCTGGTGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: QPRAAATAWTGWTGR*GRSSSSSRCCWCWK
Trigger: CTTCCAGCACCAGCAGCAGCGGCTACTGGAGCTGGAGCGCCCCCAGCGACCAGTCCAACCCGTCCACGCCGTCGCCGCCGCTCTCGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS GCA 90 bp GGTTGGACTGGTCGCTGGGGGCGCTCCAGCTCCAGTAGCCGCTGCTaGTGGTGCTGGAAGGCACGCAGCCGCCCTCCTTCCAGGATCCGC +
Preference number: 5 (lower is better)
Translates to: GWTGRWGRSSSSSRC*WCWKARSRPPSRIR
Trigger: GCGGATCCTGGAAGGAGGGCGGCTGCGTGCCTTCCAGCACCAGCAGCAGCGGCTACTGGAGCTGGAGCGCCCCCAGCGACCAGTCCAACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS GCA 90 bp AAGAGCAGGTTGCTGGCCTCCGCCTCGTCGATGCCGTCGTCTGGCTaGGCGGGGCTGCGGAAGGGCTTGAAGCTGTCAGCCGAGAGCGGC +
Preference number: 5 (lower is better)
Translates to: KSRLLASASSMPSSG*AGLRKGLKLSAESG
Trigger: GCCGCTCTCGGCTGACAGCTTCAAGCCCTTCCGCAGCCCCGCGCAGCCAGACGACGGCATCGACGAGGCGGAGGCCAGCAACCTGCTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS CCA 90 bp GTCGAAGAGCAGGTTGCTGGCCTCCGCCTCGTCGATGCCGTCGTCTaGCTGCGCGGGGCTGCGGAAGGGCTTGAAGCTGTCAGCCGAGAG +
Preference number: 5 (lower is better)
Translates to: VEEQVAGLRLVDAVV*LRGAAEGLEAVSRE
Trigger: CTCTCGGCTGACAGCTTCAAGCCCTTCCGCAGCCCCGCGCAGCCAGACGACGGCATCGACGAGGCGGAGGCCAGCAACCTGCTCTTCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS-3UTR CAA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCGCTGGCCACTCTGCTTaGTCGCTCTCTGGAGAATGT +
Preference number: 5 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGAGHSA*SLSGEC
Trigger: ACATTCTCCAGAGAGCGACAAAGCAGAGTGGCCAGC...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS GCA 90 bp TGGAATTCTTTCTTTTCCTGGGAATGGGCTCGTCGAAGAGCAGGTTaGTGGCCTCCGCCTCGTCGATGCCGTCGTCTGGCTGCGCGGGGC +
Preference number: 5 (lower is better)
Translates to: WNSFFSWEWARRRAG*WPPPRRCRRLAARG
Trigger: GCCCCGCGCAGCCAGACGACGGCATCGACGAGGCGGAGGCCAGCAACCTGCTCTTCGACGAGCCCATTCCCAGGAAAAGAAAGAATTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS CCA 90 bp AATTCTTTCTTTTCCTGGGAATGGGCTCGTCGAAGAGCAGGTTGCTaGCCTCCGCCTCGTCGATGCCGTCGTCTGGCTGCGCGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: NSFFSWEWARRRAGC*PPPRRCRRLAARGC
Trigger: GCAGCCCCGCGCAGCCAGACGACGGCATCGACGAGGCGGAGGCCAGCAACCTGCTCTTCGACGAGCCCATTCCCAGGAAAAGAAAGAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS-3UTR CAA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCGTGTACAGCTTCTCTTaGGTCTGCACAGTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGVYSFS*VCTVLA
Trigger: GGCCAACACTGTGCAGACCAAAGAGAAGCTGTACAC...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS TCA 90 bp CCACCCACAGTCTCCGAAAGTCTGGCGCTTCGAAGCAGTTGGCCCTaGCACCAGGGCAAACGCTTAACCGCAGCCCATTCTTCCCTCCGG +
Preference number: 5 (lower is better)
Translates to: PPTVSESLALRSSWP*HQGKRLTAAHSSLR
Trigger: CCGGAGGGAAGAATGGGCTGCGGTTAAGCGTTTGCCCTGGTGTCAGGGCCAACTGCTTCGAAGCGCCAGACTTTCGGAGACTGTGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCACCTTCCGACACTTTTaGCCCTCTCCCCTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLTFRHF*PSPLGF
Trigger: GAAGCCCAGGGGAGAGGGCAAAAAGTGTCGGAAGGT...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCTGCCTTTTGCGTAGATaGGCCTCTGAGCTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLCLLRR*ASELPA
Trigger: CGCAGGGAGCTCAGAGGCCAATCTACGCAAAAGGCA...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCGTGTTCTGGCTCTGTTaGTGCCAGTGCAACCCCAGG +
Preference number: 5 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLVFWLC*CQCNPR
Trigger: CCTGGGGTTGCACTGGCACAAACAGAGCCAGAACAC...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp CCGCCCAAGGCCACTGGGCAATCTGCCCATGGCTCAGGGCTTCCTGGACCAGGCTTCTACATCCTGTTATaGTCATGGCAACGGCGCTAT +
Preference number: 5 (lower is better)
Translates to: PPKATGQSAHGSGLPGPGFYILL*SWQRRY
Trigger: ATAGCGCCGTTGCCATGACAATAACAGGATGTAGAA...GCCTGGTCCAGGAAGCCCTGAGCCATGGGCAGATTGCCCAGTGGCCTTGGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS CCA 90 bp GGAAATGCTGAAGCTGCTGCCATTGGGGGTGAACTTGGCCGATCCTaGAATGGTCACAGGGGGTGTGGCCTGGTAAGCATGGTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: GNAEAAAIGGELGRS*NGHRGCGLVSMVSV
Trigger: CACACTGACCATGCTTACCAGGCCACACCCCCTGTGACCATTCCAGGATCGGCCAAGTTCACCCCCAATGGCAGCAGCTTCAGCATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCCAAATTCACTGGGGCTaGCCAAGATGGGGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLQIHWG*PRWGKA
Trigger: TGCTTTCCCCCATCTTGGCAAGCCCCAGTGAATTTG...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS TCA 90 bp CTGGTAAGCATGGTCAGTGTGCACGAGGTAGAGGGTGGTGGGAGCTaGGCGGCTCAACGGCGTCATCAACTTAGTCTCCGTTTTGGCACA +
Preference number: 5 (lower is better)
Translates to: LVSMVSVHEVEGGGS*AAQRRHQLSLRFGT
Trigger: TGTGCCAAAACGGAGACTAAGTTGATGACGCCGTTGAGCCGCTCAGCTCCCACCACCCTCTACCTCGTGCACACTGACCATGCTTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGGACGGCGTGGACGGGTaGGACTGGTCGCTGGGGGCG +
Preference number: 5 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQDGVDG*DWSLGA
Trigger: CGCCCCCAGCGACCAGTCCAACCCGTCCACGCCGTC...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACGGAAGCCACGGGGCTTaGCTCCAGGACTGCTCCATA +
Preference number: 5 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNGSHGA*LQDCSI
Trigger: TATGGAGCAGTCCTGGAGCAAAGCCCCGTGGCTTCC...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCTACTCTGGGTTGGCCTaGGAGGTGGGTAATGTTGAT +
Preference number: 5 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLYSGLA*EVGNVD
Trigger: ATCAACATTACCCACCTCCAAGGCCAACCCAGAGTA...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS GCA 90 bp GCTTTTGTGAGGTCTGGGATGCCTGTGAAAGTGACCGGAGGAGATTaGCAGGAAATGCTGAAGCTGCTGCCATTGGGGGTGAACTTGGCC +
Preference number: 5 (lower is better)
Translates to: AFVRSGMPVKVTGGD*QEMLKLLPLGVNLA
Trigger: GGCCAAGTTCACCCCCAATGGCAGCAGCTTCAGCATTTCCTGGCAATCTCCTCCGGTCACTTTCACAGGCATCCCAGACCTCACAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517986.1
CDS-3UTR CAA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGGCGCTTCGAAGCAGTaGGCCCTGACACCAGGGCAA +
Preference number: 5 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVGASKQ*ALTPGQ
Trigger: TTGCCCTGGTGTCAGGGCCAACTGCTTCGAAGCGCC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTGGGCTGCGGAAGGGCTaGAAGCTGTCAGCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: RFARRLISKTRSQACTWLGLRKG*KLSAES
Trigger: GCTCTCGGCTGACAGCTTCAAGCCCTTCCGCAGCCC...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACCTGAAGCTGCTGCCATaGGGGGTGAACTTGGCCGAT +
Preference number: 5 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNLKLLP*GVNLAD
Trigger: ATCGGCCAAGTTCACCCCCAATGGCAGCAGCTTCAG...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACCCCCACCCCCAGGCATaGCACCTGTGGTTCAAATGT +
Preference number: 5 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNPHPQA*HLWFKC
Trigger: ACATTTGAACCACAGGTGCAATGCCTGGGGGTGGGG...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTAGAGGACCGGTAGGGTaGGTGACTTGCACGGCGGGC +
Preference number: 5 (lower is better)
Translates to: RFARRLISKTRSQACTWLRGPVG*VTCTAG
Trigger: GCCCGCCGTGCAAGTCACCAACCCTACCGGTCCTCT...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGAGCAGCCCTGCACTCTaGGCCGGAGGTACTTCCCTT +
Preference number: 5 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVSSPAL*AGGTSL
Trigger: AAGGGAAGTACCTCCGGCCAAGAGTGCAGGGCTGCT...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGTCGTCGAAGAGCAGGTaGCTGGCCTCCGCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQSSKSR*LASASS
Trigger: CGACGAGGCGGAGGCCAGCAACCTGCTCTTCGACGA...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GGGAAGGCCCAAGGCTTAACACCACTGCCTGCTGGCCACTCTGCTTTGTCGCTCCTTTTCTCTCAACCTTaGCAAGTGAATGCTGCACTT +
Preference number: 5 (lower is better)
Translates to: GKAQGLTPLPAGHSALSLLFSQP*QVNAAL
Trigger: AAGTGCAGCATTCACTTGCAAAGGTTGAGAGAAAAG...GAGCGACAAAGCAGAGTGGCCAGCAGGCAGTGGTGTTAAGCCTTGGGCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTGCACGAGGCTGCTCTTaGCCAGCCCCTCATCACAGT +
Preference number: 5 (lower is better)
Translates to: RFARRLISKTRSQACTWLARGCS*PAPHHS
Trigger: ACTGTGATGAGGGGCTGGCAAAGAGCAGCCTCGTGC...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTCTGCTGACAGGCACTTaGCAGCTAAGCGCACACATT +
Preference number: 5 (lower is better)
Translates to: ARRALRHSERISYLPCHSLLTGT*QLSAHI
Trigger: AATGTGTGCGCTTAGCTGCAAAGTGCCTGTCAGCAG...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACGTAGGCCACTCGCAGTaGCATCTGATGATAGTCATG +
Preference number: 5 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNVGHSQ*HLMIVM
Trigger: CATGACTATCATCAGATGCAACTGCGAGTGGCCTAC...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGAGTGACCGGAGGAGATaGCCAGGAAATGCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVSDRRR*PGNAEA
Trigger: AGCTTCAGCATTTCCTGGCAATCTCCTCCGGTCACT...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTACCTGCTGGGACAGTTaGGAGTTCTCTACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: ARRALRHSERISYLPCHSTCWDS*EFSTSS
Trigger: AGAAGAGGTAGAGAACTCCAAACTGTCCCAGCAGGT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TGTGCCCAAAACATAGGAAGGGGGCTCCAGTGGAGTGAGGGACAAGTGCTTAACTGGGACCAGAATCCATaGTTTTGCATGCCTTTTGCG +
Preference number: 5 (lower is better)
Translates to: CAQNIGRGLQWSEGQVLNWDQNP*FCMPFA
Trigger: CGCAAAAGGCATGCAAAACAATGGATTCTGGTCCCA...GTTAAGCACTTGTCCCTCACTCCACTGGAGCCCCCTTCCTATGTTTTGGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTTACATCGTTCACGGCTaGCTTTCGCCTACGGAATTC +
Preference number: 5 (lower is better)
Translates to: ARRALRHSERISYLPCHSYIVHG*LSPTEF
Trigger: GAATTCCGTAGGCGAAAGCAAGCCGTGAACGATGTA...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTGGCTGGCCAAGGGCTTaGGCACAAGGAGGCAATGTG +
Preference number: 5 (lower is better)
Translates to: LERRRDPREATFSSVVLLGWPRA*AQGGNV
Trigger: CACATTGCCTCCTTGTGCCAAAGCCCTTGGCCAGCC...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTCCCCTTCCCTCTTCCTaGCAAGCAATACTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RFARRLISKTRSQACTWLPLPSS*QAILRL
Trigger: CAGCCTCAGTATTGCTTGCAAGGAAGAGGGAAGGGG...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTATGCCAGCTGTCCCCTaGGGAAAGTGCAGTTTAACT +
Preference number: 5 (lower is better)
Translates to: ARRALRHSERISYLPCHSMPAVP*GKCSLT
Trigger: AGTTAAACTGCACTTTCCCAAGGGGACAGCTGGCAT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAACCATTGGGGGTGAACTaGGCCGATCCTGGAATGGTC +
Preference number: 5 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEPLGVN*ADPGMV
Trigger: GACCATTCCAGGATCGGCCAAGTTCACCCCCAATGG...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGAGTGCTGCGCTGTCTaGCAACACATCCTGACATAT +
Preference number: 5 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVECCAV*QHILTY
Trigger: ATATGTCAGGATGTGTTGCAAGACAGCGCAGCACTC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGGCTCCGAGTTGCCATTaGTGTCACATCCCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVAPSCH*CHIPER
Trigger: TCTTTCAGGGATGTGACACAAATGGCAACTCGGAGC...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTTGCAGCAGTGAAATCTaGGCTCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: RFARRLISKTRSQACTWLCSSEI*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAGATTTCACTGCTGCA...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGACAAATAGCTCCGAGTaGCCATTTGTGTCACATCCC +
Preference number: 5 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVTNSSE*PFVSHP
Trigger: GGGATGTGACACAAATGGCAACTCGGAGCTATTTGT...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGCTTGCACGGCGGGCTTaGAGGCACAGTGAAAGGATT +
Preference number: 5 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMLARRA*RHSERI
Trigger: AATCCTTTCACTGTGCCTCAAAGCCCGCCGTGCAAG...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTCTATCATCACAGGTGTaGGTCACATCACAGCCATCG +
Preference number: 5 (lower is better)
Translates to: RFARRLISKTRSQACTWLLSSQV*VTSQPS
Trigger: CGATGGCTGTGATGTGACCAACACCTGTGATGATAG...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGGTGGGCTGTGCTCTGTaGTCTAAAGCAAACCTGCTG +
Preference number: 5 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRVGCAL*SKANLL
Trigger: CAGCAGGTTTGCTTTAGACAACAGAGCACAGCCCAC...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGATGTTCGGGCAGGAATaGTCTAATAAAAGGGCACCT +
Preference number: 5 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVMFGQE*SNKRAP
Trigger: AGGTGCCCTTTTATTAGACAATTCCTGCCCGAACAT...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGCTCTTTCTTCCTCTGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRLFLPL*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACAGAGGAAGAAAGAG...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAACTTGCTCTGTCCTCATaGTCCCCTCCTAAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPELALSS*SPPKVE
Trigger: TTCCACCTTAGGAGGGGACAATGAGGACAGAGCAAG...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGAAACATGGAGCCCTCTaGCTCTGTCCTCATTGTCCC +
Preference number: 5 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMKHGAL*LCPHCP
Trigger: GGGACAATGAGGACAGAGCAAGAGGGCTCCATGTTT...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGAGCTGGTTAGTACCATaGCTGCTGTCACCTTGTCCA +
Preference number: 5 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMSWLVP*LLSPCP
Trigger: TGGACAAGGTGACAGCAGCAATGGTACTAACCAGCT...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAGTGAAAGGAGGGGCTTaGCTATCATCACAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEVKGGA*LSSQVL
Trigger: CAACACCTGTGATGATAGCAAAGCCCCTCCTTTCAC...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS CCA 90 bp CATCACCTTCATGGAATTCGACTTCCTGGATTCTGTGTATCCATTTaGGGATCTGTGGATTCCAGGTTAAGAAGGTCTGCACTAGAAGGA +
Preference number: 5 (lower is better)
Translates to: HHLHGIRLPGFCVSI*GSVDSRLRRSALEG
Trigger: TCCTTCTAGTGCAGACCTTCTTAACCTGGAATCCACAGATCCCCAAATGGATACACAGAATCCAGGAAGTCGAATTCCATGAAGGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522040.5
CDS-3UTR CAA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAATCCGGCTGGCTTTTTaGGTGTCTGCTGTTTTCACA +
Preference number: 5 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPEIRLAF*VSAVFT
Trigger: TGTGAAAACAGCAGACACCAAAAAAGCCAGCCGGAT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGATTGCTGCTGTCACCTaGTCCATGTCTAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQIAAVT*SMSSSS
Trigger: AGAGGAACTAGACATGGACAAGGTGACAGCAGCAAT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GCTTGGTGGTCTACTAGTTATTCCACGCCTTGGTCCAGGGAATATGTGTCTGTGAAACACATGGTGAACTaGTTTAAACAGGTGACAAGC +
Preference number: 5 (lower is better)
Translates to: AWWSTSYSTPWSREYVSVKHMVN*FKQVTS
Trigger: GCTTGTCACCTGTTTAAACAAGTTCACCATGTGTTT...CACAGACACATATTCCCTGGACCAAGGCGTGGAATAACTAGTAGACCACCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGACACACACAGAGAACTaGGTTCCACAGAGATGGCAT +
Preference number: 5 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMTHTEN*VPQRWH
Trigger: ATGCCATCTCTGTGGAACCAAGTTCTCTGTGTGTGT...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAATGTTTTGCATGCCTTTaGCGTAGATTGGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPECFACL*RRLASE
Trigger: CTCAGAGGCCAATCTACGCAAAAGGCATGCAAAACA...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GCACGGCGGGCTTTGAGGCACAGTGAAAGGATTAGCTATCTGCCTTGTCATTCTATCTCAGCTTTGCTTTaGATGTTATCTGCATACTTG +
Preference number: 5 (lower is better)
Translates to: ARRALRHSERISYLPCHSISALL*MLSAYL
Trigger: CAAGTATGCAGATAACATCAAAAGCAAAGCTGAGAT...AGAATGACAAGGCAGATAGCTAATCCTTTCACTGTGCCTCAAAGCCCGCCGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGCACAGATTGTGGATGTaGCACTGTAGAACCTCCTTA +
Preference number: 5 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRHRLWM*HCRTSL
Trigger: TAAGGAGGTTCTACAGTGCAACATCCACAATCTGTG...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAAGAAAAAGCAGCACCTaGTCCACAAAAGTCCATGGA +
Preference number: 5 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPERKSST*STKVHG
Trigger: TCCATGGACTTTTGTGGACAAGGTGCTGCTTTTTCT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGTCTGTTTCCTGGTTCTaGGGAACTCAGTCACTTTCT +
Preference number: 5 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQSVSWF*GTQSLS
Trigger: AGAAAGTGACTGAGTTCCCAAGAACCAGGAAACAGA...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp CTAATTCAGAACCCAGGGCTGCTTTCAAAAGTGTGTCTTAGTGTGACACCAGAAAATCATTTACAGAACTaGCCTGGTCCTTCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LIQNPGLLSKVCLSVTPENHLQN*PGPSEA
Trigger: TGCCTCAGAAGGACCAGGCAAGTTCTGTAAATGATT...TTCTGGTGTCACACTAAGACACACTTTTGAAAGCAGCCCTGGGTTCTGAATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGTGGTCTCCACCATTCTaGTGTTCCTCTTTGCCTTAT +
Preference number: 5 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMWSPPF*CSSLPY
Trigger: ATAAGGCAAAGAGGAACACAAGAATGGTGGAGACCA...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp AGATTTGCAAGACGCCTCATCTCAAAGACTAGGAGCCAAGCCTGTACATGGCTTAAAGATGCTAGGGTTTaGTATGTGGAAAAACCTCCT +
Preference number: 5 (lower is better)
Translates to: RFARRLISKTRSQACTWLKDARV*YVEKPP
Trigger: AGGAGGTTTTTCCACATACAAAACCCTAGCATCTTT...AAGCCATGTACAGGCTTGGCTCCTAGTCTTTGAGATGAGGCGTCTTGCAAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGTCGCTGGAAGTAAGGTaGTCTGTCAAAGTTAGACTT +
Preference number: 5 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRSLEVR*SVKVRL
Trigger: AAGTCTAACTTTGACAGACAACCTTACTTCCAGCGA...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAACTTAGTCTCCGTTTaGGCACAAGGAGTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQNLVSV*AQGVSV
Trigger: AACAGAAACTCCTTGTGCCAAAACGGAGACTAAGTT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGGGTGCTCTTCCTACTTaGCATAGGTATAGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMGALPT*HRYRRN
Trigger: ATTTCTCCTATACCTATGCAAAGTAGGAAGAGCACC...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGACATGCATTTTCCTTTaGGCGTTATGTTCCCTTTTG +
Preference number: 5 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRTCIFL*ALCSLL
Trigger: CAAAAGGGAACATAACGCCAAAAGGAAAATGCATGT...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGGATCAGTGGTGTATATaGGAATTCATAGCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRDQWCI*EFIAFW
Trigger: CCAGAAAGCTATGAATTCCAATATACACCACTGATC...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGTCTCCAGACCTATTTTaGCATGCCCTTTATTTTTCC +
Preference number: 5 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRSPDLF*HALYFS
Trigger: GGAAAAATAAAGGGCATGCAAAAATAGGTCTGGAGA...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TTGCTATCATCACAGGTGTTGGTCACATCACAGCCATCGATTTCCAATAAGCAGAGGACCAGCAAGGCTTaGTATTCACAATTACATTCA +
Preference number: 5 (lower is better)
Translates to: LLSSQVLVTSQPSISNKQRTSKA*YSQLHS
Trigger: TGAATGTAATTGTGAATACAAAGCCTTGCTGGTCCT...CTGCTTATTGGAAATCGATGGCTGTGATGTGACCAACACCTGTGATGATAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTTCTGTTTCCACTCATTaGTATGCACAAATTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LERRRDPREATFSSVVLLSVSTH*YAQILP
Trigger: GGGAAGAATTTGTGCATACAAATGAGTGGAAACAGA...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGAAGAGACATAGCCCTTaGTTTGGTGAGCAAGAATTA +
Preference number: 5 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRKRHSP*FGEQEL
Trigger: TAATTCTTGCTCACCAAACAAAGGGCTATGTCTCTT...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp ACATCCTGTTATTGTCATGGCAACGGCGCTATGATTCTTTTCCATCAGAAGAGGAACAACTTTTCTTTTTaGCTCAAGGAGACAGATGGA +
Preference number: 5 (lower is better)
Translates to: TSCYCHGNGAMILFHQKRNNFSF*LKETDG
Trigger: TCCATCTGTCTCCTTGAGCAAAAAAGAAAAGTTGTT...CCTCTTCTGATGGAAAAGAATCATAGCGCCGTTGCCATGACAATAACAGGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGGAATGTCTGGTTAATTaGGCACTTCATTTAGTTCCA +
Preference number: 5 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMECLVN*ALHLVP
Trigger: TGGAACTAAATGAAGTGCCAAATTAACCAGACATTC...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTATATTTCCAGTTAACTaGAGAAGTAGAGTACTGACG +
Preference number: 5 (lower is better)
Translates to: LERRRDPREATFSSVVLLIFPVN*RSRVLT
Trigger: CGTCAGTACTCTACTTCTCAAGTTAACTGGAAATAT...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp GAACATAGTGCAAGCCCTGGCCCTACTAAACTGAGAAATTCCTATACCTACATGCTAAGAATTCTATCTTaGGGCCTGTCTACTATGATT +
Preference number: 5 (lower is better)
Translates to: EHSASPGPTKLRNSYTYMLRILS*GLSTMI
Trigger: AATCATAGTAGACAGGCCCAAAGATAGAATTCTTAG...CATGTAGGTATAGGAATTTCTCAGTTTAGTAGGGCCAGGGCTTGCACTATGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS-3UTR CAA 90 bp TTAGAAAGGAGAAGAGATCCCAGGGAAGCTACATTCAGCTCTGTAGTTCTGCTTGCAACACCATATTCATaGTTACAAGCATTACAGAAC +
Preference number: 5 (lower is better)
Translates to: LERRRDPREATFSSVVLLATPYS*LQALQN
Trigger: GTTCTGTAATGCTTGTAACAATGAATATGGTGTTGC...AAGCAGAACTACAGAGCTGAATGTAGCTTCCCTGGGATCTCTTCTCCTTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS CCA 72 bp GCGGCGGCGACGGCGTGGACGGGTTGGACTGGTCGCTaGGGGCGCTCCAGCTCCAGTAGCCGCTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: AAATAWTGWTGR*GRSSSSSRCCW
Trigger: CCAGCAGCAGCGGCTACTGGAGCTGGAGCGCCCCCAGCGACCAGTCCAACCCGTCCACGCCGTCGCCGCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS TCA 72 bp TGCCGTCGTCTGGCTGCGCGGGGCTGCGGAAGGGCTTaGAGCTGTCAGCCGAGAGCGGCGGCGACGGCGTGG +
Preference number: 6 (lower is better)
Translates to: CRRLAARGCGRA*SCQPRAAATAW
Trigger: CCACGCCGTCGCCGCCGCTCTCGGCTGACAGCTTCAAGCCCTTCCGCAGCCCCGCGCAGCCAGACGACGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS CAA 90 bp GCCTCGTCGATGCCGTCGTCTGGCTGCGCGGGGCTGCGGAAGGGCTaGAAGCTGTCAGCCGAGAGCGGCGGCGACGGCGTGGACGGGTTG +
Preference number: 6 (lower is better)
Translates to: ASSMPSSGCAGLRKG*KLSAESGGDGVDGL
Trigger: CAACCCGTCCACGCCGTCGCCGCCGCTCTCGGCTGACAGCTTCAAGCCCTTCCGCAGCCCCGCGCAGCCAGACGACGGCATCGACGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS GCA 72 bp GGTCGCTGGGGGCGCTCCAGCTCCAGTAGCCGCTGCTaGTGGTGCTGGAAGGCACGCAGCCGCCCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: GRWGRSSSSSRC*WCWKARSRPPS
Trigger: GGAAGGAGGGCGGCTGCGTGCCTTCCAGCACCAGCAGCAGCGGCTACTGGAGCTGGAGCGCCCCCAGCGACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS CCA 72 bp TGTCAGCCGAGAGCGGCGGCGACGGCGTGGACGGGTTaGACTGGTCGCTGGGGGCGCTCCAGCTCCAGTAGC +
Preference number: 6 (lower is better)
Translates to: CQPRAAATAWTG*TGRWGRSSSSS
Trigger: GCTACTGGAGCTGGAGCGCCCCCAGCGACCAGTCCAACCCGTCCACGCCGTCGCCGCCGCTCTCGGCTGACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS CAA 72 bp ATGCCGTCGTCTGGCTGCGCGGGGCTGCGGAAGGGCTaGAAGCTGTCAGCCGAGAGCGGCGGCGACGGCGTG +
Preference number: 6 (lower is better)
Translates to: MPSSGCAGLRKG*KLSAESGGDGV
Trigger: CACGCCGTCGCCGCCGCTCTCGGCTGACAGCTTCAAGCCCTTCCGCAGCCCCGCGCAGCCAGACGACGGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS GCA 72 bp CGTCGAAGAGCAGGTTGCTGGCCTCCGCCTCGTCGATaGCGTCGTCTGGCTGCGCGGGGCTGCGGAAGGGCT +
Preference number: 6 (lower is better)
Translates to: RRRAGCWPPPRR*RRLAARGCGRA
Trigger: AGCCCTTCCGCAGCCCCGCGCAGCCAGACGACGGCATCGACGAGGCGGAGGCCAGCAACCTGCTCTTCGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS GCA 72 bp TTGCTGGCCTCCGCCTCGTCGATGCCGTCGTCTGGCTaGGCGGGGCTGCGGAAGGGCTTGAAGCTGTCAGCC +
Preference number: 6 (lower is better)
Translates to: LLASASSMPSSG*AGLRKGLKLSA
Trigger: GGCTGACAGCTTCAAGCCCTTCCGCAGCCCCGCGCAGCCAGACGACGGCATCGACGAGGCGGAGGCCAGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS CCA 72 bp CAGGTTGCTGGCCTCCGCCTCGTCGATGCCGTCGTCTaGCTGCGCGGGGCTGCGGAAGGGCTTGAAGCTGTC +
Preference number: 6 (lower is better)
Translates to: QVAGLRLVDAVV*LRGAAEGLEAV
Trigger: GACAGCTTCAAGCCCTTCCGCAGCCCCGCGCAGCCAGACGACGGCATCGACGAGGCGGAGGCCAGCAACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS GCA 72 bp CTGACTGTGCCTCTGGGTGGGGAGGACAGGACCGTGTaGGCATGCTGTCTCTGCTCTCCTGTGCCCACCGGA +
Preference number: 6 (lower is better)
Translates to: LTVPLGGEDRTV*ACCLCSPVPTG
Trigger: TCCGGTGGGCACAGGAGAGCAGAGACAGCATGCGCACACGGTCCTGTCCTCCCCACCCAGAGGCACAGTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS CCA 72 bp TTTTCCTGGGAATGGGCTCGTCGAAGAGCAGGTTGCTaGCCTCCGCCTCGTCGATGCCGTCGTCTGGCTGCG +
Preference number: 6 (lower is better)
Translates to: FSWEWARRRAGC*PPPRRCRRLAA
Trigger: CGCAGCCAGACGACGGCATCGACGAGGCGGAGGCCAGCAACCTGCTCTTCGACGAGCCCATTCCCAGGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS CAA 90 bp ATGGAATTCTTTCTTTTCCTGGGAATGGGCTCGTCGAAGAGCAGGTaGCTGGCCTCCGCCTCGTCGATGCCGTCGTCTGGCTGCGCGGGG +
Preference number: 6 (lower is better)
Translates to: MEFFLFLGMGSSKSR*LASASSMPSSGCAG
Trigger: CCCCGCGCAGCCAGACGACGGCATCGACGAGGCGGAGGCCAGCAACCTGCTCTTCGACGAGCCCATTCCCAGGAAAAGAAAGAATTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS GCA 72 bp TTCTTTTCCTGGGAATGGGCTCGTCGAAGAGCAGGTTaGTGGCCTCCGCCTCGTCGATGCCGTCGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: FFSWEWARRRAG*WPPPRRCRRLA
Trigger: AGCCAGACGACGGCATCGACGAGGCGGAGGCCAGCAACCTGCTCTTCGACGAGCCCATTCCCAGGAAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS GCA 72 bp ACAGGACCGTGTGCGCATGCTGTCTCTGCTCTCCTGTaGCCACCGGATGATGTGTGGGTGACACTGGGATGC +
Preference number: 6 (lower is better)
Translates to: TGPCAHAVSALL*PPDDVWVTLGC
Trigger: GCATCCCAGTGTCACCCACACATCATCCGGTGGGCACAGGAGAGCAGAGACAGCATGCGCACACGGTCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS CCA 72 bp CCGCTTAATGCTCCCCACCCACAGTCTCCGAAAGTCTaGCGCTTCGAAGCAGTTGGCCCTGACACCAGGGCA +
Preference number: 6 (lower is better)
Translates to: PLNAPHPQSPKV*RFEAVGPDTRA
Trigger: TGCCCTGGTGTCAGGGCCAACTGCTTCGAAGCGCCAGACTTTCGGAGACTGTGGGTGGGGAGCATTAAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS CAA 72 bp TTTCTTTTCCTGGGAATGGGCTCGTCGAAGAGCAGGTaGCTGGCCTCCGCCTCGTCGATGCCGTCGTCTGGC +
Preference number: 6 (lower is better)
Translates to: FLFLGMGSSKSR*LASASSMPSSG
Trigger: GCCAGACGACGGCATCGACGAGGCGGAGGCCAGCAACCTGCTCTTCGACGAGCCCATTCCCAGGAAAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327835.7
ENST00000519936.1
ENST00000520336.1
CDS CCA 72 bp CCTGGTAAGCATGGTCAGTGTGCACGAGGTAGAGGGTaGTGGGAGCTGAGCGGCTCAACGGCGTCATCAACT +
Preference number: 6 (lower is better)
Translates to: PGKHGQCARGRG*WELSGSTASST
Trigger: AGTTGATGACGCCGTTGAGCCGCTCAGCTCCCACCACCCTCTACCTCGTGCACACTGACCATGCTTACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS CAA 72 bp ACCCACAGTCTCCGAAAGTCTGGCGCTTCGAAGCAGTaGGCCCTGACACCAGGGCAAACGCTTAACCGCAGC +
Preference number: 6 (lower is better)
Translates to: THSLRKSGASKQ*ALTPGQTLNRS
Trigger: GCTGCGGTTAAGCGTTTGCCCTGGTGTCAGGGCCAACTGCTTCGAAGCGCCAGACTTTCGGAGACTGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS CAA 72 bp CAGGAAATGCTGAAGCTGCTGCCATTGGGGGTGAACTaGGCCGATCCTGGAATGGTCACAGGGGGTGTGGCC +
Preference number: 6 (lower is better)
Translates to: QEMLKLLPLGVN*ADPGMVTGGVA
Trigger: GGCCACACCCCCTGTGACCATTCCAGGATCGGCCAAGTTCACCCCCAATGGCAGCAGCTTCAGCATTTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS CAA 90 bp ATGCTCCCCACCCACAGTCTCCGAAAGTCTGGCGCTTCGAAGCAGTaGGCCCTGACACCAGGGCAAACGCTTAACCGCAGCCCATTCTTC +
Preference number: 6 (lower is better)
Translates to: MLPTHSLRKSGASKQ*ALTPGQTLNRSPFF
Trigger: GAAGAATGGGCTGCGGTTAAGCGTTTGCCCTGGTGTCAGGGCCAACTGCTTCGAAGCGCCAGACTTTCGGAGACTGTGGGTGGGGAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS TCA 72 bp GTCTCCGAAAGTCTGGCGCTTCGAAGCAGTTGGCCCTaGCACCAGGGCAAACGCTTAACCGCAGCCCATTCT +
Preference number: 6 (lower is better)
Translates to: VSESLALRSSWP*HQGKRLTAAHS
Trigger: AGAATGGGCTGCGGTTAAGCGTTTGCCCTGGTGTCAGGGCCAACTGCTTCGAAGCGCCAGACTTTCGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS TCA 72 bp ATGGTCAGTGTGCACGAGGTAGAGGGTGGTGGGAGCTaGGCGGCTCAACGGCGTCATCAACTTAGTCTCCGT +
Preference number: 6 (lower is better)
Translates to: MVSVHEVEGGGS*AAQRRHQLSLR
Trigger: ACGGAGACTAAGTTGATGACGCCGTTGAGCCGCTCAGCTCCCACCACCCTCTACCTCGTGCACACTGACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS CAA 90 bp AAAGTGACCGGAGGAGATTGCCAGGAAATGCTGAAGCTGCTGCCATaGGGGGTGAACTTGGCCGATCCTGGAATGGTCACAGGGGGTGTG +
Preference number: 6 (lower is better)
Translates to: KVTGGDCQEMLKLLP*GVNLADPGMVTGGV
Trigger: CACACCCCCTGTGACCATTCCAGGATCGGCCAAGTTCACCCCCAATGGCAGCAGCTTCAGCATTTCCTGGCAATCTCCTCCGGTCACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS GCA 72 bp GACACTGGGATGCCTGTGAAAGTGACCGGAGGAGATTaGCAGGAAATGCTGAAGCTGCTGCCATTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: DTGMPVKVTGGD*QEMLKLLPLGV
Trigger: CACCCCCAATGGCAGCAGCTTCAGCATTTCCTGGCAATCTCCTCCGGTCACTTTCACAGGCATCCCAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS GCA 72 bp AGGTCTGGGATGCCTGTGAAAGTGACCGGAGGAGATTaGCAGGAAATGCTGAAGCTGCTGCCATTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: RSGMPVKVTGGD*QEMLKLLPLGV
Trigger: CACCCCCAATGGCAGCAGCTTCAGCATTTCCTGGCAATCTCCTCCGGTCACTTTCACAGGCATCCCAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517986.1
CDS CAA 72 bp GGAGGAGATTGCCAGGAAATGCTGAAGCTGCTGCCATaGGGGGTGAACTTGGCCGATCCTGGAATGGTCACA +
Preference number: 6 (lower is better)
Translates to: GGDCQEMLKLLP*GVNLADPGMVT
Trigger: TGTGACCATTCCAGGATCGGCCAAGTTCACCCCCAATGGCAGCAGCTTCAGCATTTCCTGGCAATCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327835.7
CDS CAA 90 bp AGCTTTTGTGAGGTCTGGGATGCCTGTGAAAGTGACCGGAGGAGATaGCCAGGAAATGCTGAAGCTGCTGCCATTGGGGGTGAACTTGGC +
Preference number: 6 (lower is better)
Translates to: SFCEVWDACESDRRR*PGNAEAAAIGGELG
Trigger: GCCAAGTTCACCCCCAATGGCAGCAGCTTCAGCATTTCCTGGCAATCTCCTCCGGTCACTTTCACAGGCATCCCAGACCTCACAAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517986.1
CDS CAA 90 bp GTGGGAGCTGAGCGGCTCAACGGCGTCATCAACTTAGTCTCCGTTTaGGCACAAGGAGTTTCTGTTCGGCTTGAATCTGGGATGGGGAAA +
Preference number: 6 (lower is better)
Translates to: VGAERLNGVINLVSV*AQGVSVRLESGMGK
Trigger: TTTCCCCATCCCAGATTCAAGCCGAACAGAAACTCCTTGTGCCAAAACGGAGACTAAGTTGATGACGCCGTTGAGCCGCTCAGCTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327835.7
ENST00000522040.5
CDS CAA 72 bp GAGCGGCTCAACGGCGTCATCAACTTAGTCTCCGTTTaGGCACAAGGAGTTTCTGTTCGGCTTGAATCTGGG +
Preference number: 6 (lower is better)
Translates to: ERLNGVINLVSV*AQGVSVRLESG
Trigger: CCCAGATTCAAGCCGAACAGAAACTCCTTGTGCCAAAACGGAGACTAAGTTGATGACGCCGTTGAGCCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327835.7
ENST00000522040.5
CDS CAA 72 bp GTCGACAAGCTGGTTAGTACCATTGCTGCTGTCACCTaGTCCATGTCTAGTTCCTCTGAAGATTTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: VDKLVSTIAAVT*SMSSSSEDFLA
Trigger: AGCAAGGAAATCTTCAGAGGAACTAGACATGGACAAGGTGACAGCAGCAATGGTACTAACCAGCTTGTCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327835.7
ENST00000519936.1
CDS CAA 90 bp ACATCACCTTCATGGAATTCGACTTCCTGGATTCTGTGTATCCATTaGGGGATCTGTGGATTCCAGGTTAAGAAGGTCTGCACTAGAAGG +
Preference number: 6 (lower is better)
Translates to: TSPSWNSTSWILCIH*GICGFQVKKVCTRR
Trigger: CCTTCTAGTGCAGACCTTCTTAACCTGGAATCCACAGATCCCCAAATGGATACACAGAATCCAGGAAGTCGAATTCCATGAAGGTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522040.5
CDS CAA 72 bp TCATGGAATTCGACTTCCTGGATTCTGTGTATCCATTaGGGGATCTGTGGATTCCAGGTTAAGAAGGTCTGC +
Preference number: 6 (lower is better)
Translates to: SWNSTSWILCIH*GICGFQVKKVC
Trigger: GCAGACCTTCTTAACCTGGAATCCACAGATCCCCAAATGGATACACAGAATCCAGGAAGTCGAATTCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522040.5
CDS CAA 72 bp GTCGACAAGCTGGTTAGTACCATTGCTGCTGTCACCTaGTCCATGTCTAGTTCCTCTGAAGATTTCCATGTT +
Preference number: 6 (lower is better)
Translates to: VDKLVSTIAAVT*SMSSSSEDFHV
Trigger: AACATGGAAATCTTCAGAGGAACTAGACATGGACAAGGTGACAGCAGCAATGGTACTAACCAGCTTGTCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520336.1
CDS CAA 90 bp AAAGGGCTAGTCGACAAGCTGGTTAGTACCATTGCTGCTGTCACCTaGTCCATGTCTAGTTCCTCTGAAGATTTCCATGTTGTTAAAGTG +
Preference number: 6 (lower is better)
Translates to: KGLVDKLVSTIAAVT*SMSSSSEDFHVVKV
Trigger: CACTTTAACAACATGGAAATCTTCAGAGGAACTAGACATGGACAAGGTGACAGCAGCAATGGTACTAACCAGCTTGTCGACTAGCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520336.1
CDS CAA 72 bp GGTTGTCTGTCAAAGTTAGACTTTGAACGTAGAGATTaGCTACAAGTCATTTTAATGGACACTGATGTGCAT +
Preference number: 6 (lower is better)
Translates to: GCLSKLDFERRD*LQVILMDTDVH
Trigger: ATGCACATCAGTGTCCATTAAAATGACTTGTAGCAAATCTCTACGTTCAAAGTCTAACTTTGACAGACAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327835.7