RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF687 (Homo sapiens)

Ensembl gene IDs: ENSG00000143373

Ensembl transcript IDs: ENST00000324048.9, ENST00000336715.11, ENST00000426871.1, ENST00000436614.1, ENST00000443959.1, ENST00000449313.5, ENST00000459919.1

Found 889 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTGGGGGACTTGGCTGGCGGTGTCGTGCTGTCAGGCTCCTCACTaGAAGAGTCAGAAGACTGGCGGCGTTTCCGACCTGGCCCCTGGG +
Preference number: 1 (lower is better)
Translates to: PWGTWLAVSCCQAPH*KSQKTGGVSDLAPG
Trigger: CCCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR CCA 90 bp GCAGAGGGCCATGGCCTCCAGATCCAGGTCCGCCCCTGGGGGACTTaGCTGGCGGTGTCGTGCTGTCAGGCTCCTCACTGCAAGAGTCAG +
Preference number: 1 (lower is better)
Translates to: AEGHGLQIQVRPWGT*LAVSCCQAPHCKSQ
Trigger: CTGACTCTTGCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCGGACCTGGATCTGGAGGCCATGGCCCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR CCA 90 bp GGCGGTGTCGTGCTGTCAGGCTCCTCACTGCAAGAGTCAGAAGACTaGCGGCGTTTCCGACCTGGCCCCTGGGCTCTGGCACTGGAACCC +
Preference number: 1 (lower is better)
Translates to: GGVVLSGSSLQESED*RRFRPGPWALALEP
Trigger: GGGTTCCAGTGCCAGAGCCCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAGTGAGGAGCCTGACAGCACGACACCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR GCA 90 bp CTCCAGATCCAGGTCCGCCCCTGGGGGACTTGGCTGGCGGTGTCGTaGTGTCAGGCTCCTCACTGCAAGAGTCAGAAGACTGGCGGCGTT +
Preference number: 1 (lower is better)
Translates to: LQIQVRPWGTWLAVS*CQAPHCKSQKTGGV
Trigger: AACGCCGCCAGTCTTCTGACTCTTGCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCGGACCTGGATCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR CCA 90 bp AGGGCCATGGCCTCCAGATCCAGGTCCGCCCCTGGGGGACTTGGCTaGCGGTGTCGTGCTGTCAGGCTCCTCACTGCAAGAGTCAGAAGA +
Preference number: 1 (lower is better)
Translates to: RAMASRSRSAPGGLG*RCRAVRLLTARVRR
Trigger: TCTTCTGACTCTTGCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCGGACCTGGATCTGGAGGCCATGGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR CCA 90 bp GCCCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTaGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGCCACAGACC +
Preference number: 1 (lower is better)
Translates to: APCRALMNAMPCVRK*VLRFRGLSQLLPQT
Trigger: GGTCTGTGGCAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR GCA 90 bp TTGTCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATaGGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTC +
Preference number: 1 (lower is better)
Translates to: LSPTAPCRALMNAMP*VRKWVLRFRGLSQL
Trigger: GAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR GCA 90 bp GGCACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATaGCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCC +
Preference number: 1 (lower is better)
Translates to: GTRAGPGLEEESSSP*LKELWRGVSIHDTP
Trigger: GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR TCA 90 bp TGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTaGACCTGTCTAGCAGGCATACCTAAGTCCCATCCTCCCACCCCC +
Preference number: 1 (lower is better)
Translates to: CGEVCPSMTPPSVLP*TCLAGIPKSHPPTP
Trigger: GGGGGTGGGAGGATGGGACTTAGGTATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR TCA 90 bp AGCCGTGCCGGACCTGGACATGTTTCTCTAGGATCAGGCGGCTGCTaGAGGTGCGTTTTCCCTCTGTGCAATACCTGCAGGGGTAAACTC +
Preference number: 1 (lower is better)
Translates to: SRAGPGHVSLGSGGC*RCVFPLCNTCRGKL
Trigger: GAGTTTACCCCTGCAGGTATTGCACAGAGGGAAAACGCACCTTCAGCAGCCGCCTGATCCTAGAGAAACATGTCCAGGTCCGGCACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR CCA 90 bp CCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTaGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTG +
Preference number: 1 (lower is better)
Translates to: PGLEEESSSPCLKEL*RGVSIHDTPISPSL
Trigger: CAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR CCA 90 bp AGCAGGAGCATAAAATTAATTAGTGTTGGGCTCAGAAAGGAGGAATaGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGA +
Preference number: 1 (lower is better)
Translates to: SRSIKLISVGLRKEE*RVHSTRTPGPNPKG
Trigger: TCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACTAATTAATTTTATGCTCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CCA 90 bp TCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGCTGGCCCCTGGGCTCTaGCACTGGAACCCCGAGCCA +
Preference number: 2 (lower is better)
Translates to: SPTAPCRALMNAMPCVRKLAPGL*HWNPEP
Trigger: TGGCTCGGGGTTCCAGTGCCAGAGCCCAGGGGCCAG...CTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR CCA 90 bp CTGGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCGCCCCTGGGGGACTTaGCTGGCGGTGTCGTGCTGT +
Preference number: 2 (lower is better)
Translates to: LVSPRPWRLVVPNSPLPSRPWGT*LAVSCC
Trigger: ACAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCG...GCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp TCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGAGAAGCAGGCAGGGGTaGGTCTCCACCATCGGGGTC +
Preference number: 2 (lower is better)
Translates to: SPTAPCRALMNAMPCVRKRSRQG*VSTIGV
Trigger: GACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCT...CTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp GGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCCCCACAGTCGAGGCACTaGTGGGCACCATCCTCCACC +
Preference number: 2 (lower is better)
Translates to: GQSQALETSCPQQPPAEPPQSRH*WAPSST
Trigger: GGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGG...GGGCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR-3UTR CCA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGCCAGCCCCAGGGCACTaGCTTTACCCACACCCCGTC +
Preference number: 2 (lower is better)
Translates to: PLPSPDERHAMRAEVGLEPAPGH*LYPHPV
Trigger: GACGGGGTGTGGGTAAAGCCAGTGCCCTGGGGCTGG...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp GCTCTGTTCTGTGGAGCTGCTGCTCCGGTAGCGCAGAGGGCCATGGCCTCCAGATGGCTGGCGGTGTCGTaGTGTCAGGCTCCTCACTGC +
Preference number: 2 (lower is better)
Translates to: ALFCGAAAPVAQRAMASRWLAVS*CQAPHC
Trigger: GCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCA...TCTGGAGGCCATGGCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAACAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGCTCAGTAGCAGGGGCTaGCCCTCCCTGAGAAACAGC +
Preference number: 2 (lower is better)
Translates to: PLPSPDERHAMRAEVGLELSSRG*PSLRNS
Trigger: GCTGTTTCTCAGGGAGGGGCAGCCCCTGCTACTGAG...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR CCA 90 bp CCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGACCTGGGGGACTTGGCTaGCGGTGTCGTGCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: PPEAGRGESPPSGSDLDGPGGLG*RCRAVR
Trigger: CCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGG...TCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CCA 90 bp CCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGACCAGCCCCAGGGCACTaGCTTTACCCACACCCCGTC +
Preference number: 2 (lower is better)
Translates to: PPEAGRGESPPSGSDLDGPAPGH*LYPHPV
Trigger: GACGGGGTGTGGGTAAAGCCAGTGCCCTGGGGCTGG...TCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR-3UTR CCA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGGGGCTCAGGGGAGCTaGGTACTTCCTCCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: PLPSPDERHAMRAEVGLEGAQGS*VLPPLL
Trigger: CAGAAGAGGAGGAAGTACCCAGCTCCCCTGAGCCCC...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR TCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCGGGCTTGAGTGCCAGTaGGTTGGGGTTGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGGLECQ*VGVGRG
Trigger: CCCCCGCCCAACCCCAACTCACTGGCACTCAAGCCC...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGCCCTCAACCCCATCATaGGGCTCTGTTCTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: PLPSPDERHAMRAEVGLEPSTPS*GSVLWS
Trigger: GCTCCACAGAACAGAGCCTCATGATGGGGTTGAGGG...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp CCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATGTTCTGTGGAGCTGCTaGTCCGGTAGCGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: PWRLVVPNSPLPSPDERHVLWSC*SGSAEG
Trigger: GCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAAC...ATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp CCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCAGTTCTGTGGAGCTGCTaGTCCGGTAGCGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: PQTLQVSGPPEAGRGESPVLWSC*SGSAEG
Trigger: GCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAAC...TGGAGACTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATGGCTGGCGGTGTCGTaGTGTCAGGCTCCTCACTGC +
Preference number: 2 (lower is better)
Translates to: TRAGPGLEEESSSPCLKEWLAVS*CQAPHC
Trigger: GCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCA...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAACCACAGTCGAGGCACTaGTGGGCACCATCCTCCACC +
Preference number: 2 (lower is better)
Translates to: TRAGPGLEEESSSPCLKEPQSRH*WAPSST
Trigger: GGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGG...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCGCGGCGTTTCCGACCTaGCCCCTGGGCTCTGGCACT +
Preference number: 2 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSAAFPT*PLGSGT
Trigger: AGTGCCAGAGCCCAGGGGCCAGGTCGGAAACGCCGC...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR CAA 90 bp TGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTaGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: CVRKWVLRFRGLSQL*PQTLQVSGPPEAGR
Trigger: CCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGATCGGGGTCAGACCTTaGTGGAGGGGCCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: AGPGLEEESSSPCLKELWIGVRP*WRGLFL
Trigger: GAGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGAT...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCCCCACCCCCACCCTTaGGGCCTTTGCTCCCTAGTT +
Preference number: 2 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGPHPHP*GLCSLV
Trigger: AACTAGGGAGCAAAGGCCTCAAGGGTGGGGGTGGGG...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR GCA 90 bp GGCAAAGCACAAGCCACAGTCGAGGCACTGCTGGGCACCATCCTCCACCCTCAATCTGTTCTGTGGAGCTaGTGCTCCGGTAGCGCAGAG +
Preference number: 2 (lower is better)
Translates to: GKAQATVEALLGTILHPQSVLWS*CSGSAE
Trigger: CTCTGCGCTACCGGAGCAGCAGCTCCACAGAACAGA...TTGAGGGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGGCTTGTGCTTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CCA 90 bp AGGAGCGCTCACACAGGCGACAGGGGAACTTTTTCACTGACTTGCCATGCTCCTCCTGGGGGACTTGGCTaGCGGTGTCGTGCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: RSAHTGDRGTFSLTCHAPPGGLG*RCRAVR
Trigger: CCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGG...AGGAGCATGGCAAGTCAGTGAAAAAGTTCCCCTGTCGCCTGTGTGAGCGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR CCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCTTCCGACCTGGCCCCTaGGCTCTGGCACTGGAACCC +
Preference number: 2 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSFRPGP*ALALEP
Trigger: GGGTTCCAGTGCCAGAGCCCAGGGGCCAGGTCGGAA...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR CAA 90 bp TGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTaGAGGTTTAGAGGGCTGTCGCAGCTCTTGCCACAGACCTTACAG +
Preference number: 2 (lower is better)
Translates to: CRALMNAMPCVRKWV*RFRGLSQLLPQTLQ
Trigger: CTGTAAGGTCTGTGGCAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGCCCTCAACCCCATCATaGGGCTCTGTTCTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: AGPGLEEESSSPCLKELWPSTPS*GSVLWS
Trigger: GCTCCACAGAACAGAGCCTCATGATGGGGTTGAGGG...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCAGAAGCAGGCAGGGGTaGGTCTCCACCATCGGGGTC +
Preference number: 2 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPRSRQG*VSTIGV
Trigger: GACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCT...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR CAA 90 bp GGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATaGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: GPGLEEESSSPCLKE*WRGVSIHDTPISPS
Trigger: GGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATCTCCTGTGGCCCCCTTaGCAGGACTCATCCCTACCA +
Preference number: 2 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHLLWPP*QDSSLP
Trigger: TGGTAGGGATGAGTCCTGTCAAGGGGGCCACAGGAG...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATTCAGGGAACCAGGAGTaGCACAGGCCACAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHSGNQE*HRPQVQ
Trigger: CTGGACCTGTGGCCTGTGTCACTCCTGGTTCCCTGA...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR CCA 90 bp AACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGACCCCGTCTCTTCTTGTaGCTGATGAAACGGTGTCGG +
Preference number: 2 (lower is better)
Translates to: NSPAEGSGSSRENQAPRGPRLFL*LMKRCR
Trigger: CCGACACCGTTTCATCAGCCACAAGAAGAGACGGGG...TCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGAGGTGTGTCCATCCATaGCACCCCCATCAGTCCTTC +
Preference number: 2 (lower is better)
Translates to: RRNGGSTLLGLQGQTQRERCVHP*HPHQSF
Trigger: GAAGGACTGATGGGGGTGTCATGGATGGACACACCT...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGAGAAGTGAAAGGCACTaGAGGGGTAGGGGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: RRNGGSTLLGLQGQTQRERSERH*RGRGLE
Trigger: CTCAAGCCCCCTACCCCTGCAGTGCCTTTCACTTCT...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATATGAACGCCATGCCATaGGTGCGGAAGTGGGTCTTG +
Preference number: 2 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHMNAMP*VRKWVL
Trigger: CAAGACCCACTTCCGCACGCATGGCATGGCGTTCAT...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCTGTCAGGCTCCTCACTaGAAGAGTCAGAAGACTGGC +
Preference number: 2 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGCQAPH*KSQKTG
Trigger: GCCAGTCTTCTGACTCTTGCAGTGAGGAGCCTGACA...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR CCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAATGCTCCTTCTTCATGTaGGCCACGTATTCATCACGC +
Preference number: 2 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEECSFFM*ATYSSR
Trigger: GCGTGATGAATACGTGGCCCACATGAAGAAGGAGCA...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR TCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGGTTCCAGTCCATGCCTaGAGGAATTGTGGAGAGGTG +
Preference number: 2 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGVPVHA*RNCGEV
Trigger: CACCTCTCCACAATTCCTTCAGGCATGGACTGGAAC...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCGTTCCAGTCCATGCCTaGAGGAATTGTGGAGAGGTG +
Preference number: 2 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSVPVHA*RNCGEV
Trigger: CACCTCTCCACAATTCCTTCAGGCATGGACTGGAAC...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCTCCTGTGGCCCCCTTaGCAGGACTCATCCCTACCA +
Preference number: 2 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHLLWPP*QDSSLP
Trigger: TGGTAGGGATGAGTCCTGTCAAGGGGGCCACAGGAG...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp CTCTTCCCTGAGAAGGGCGGGCCTTCCATGTTCTCTCACCCGCTTCAACTCCACCCACACTGGGGGTTCTaGAGCAGGAGCATAAAATTA +
Preference number: 2 (lower is better)
Translates to: LFPEKGGPSMFSHPLQLHPHWGF*SRSIKL
Trigger: TAATTTTATGCTCCTGCTGCAGAACCCCCAGTGTGG...GTGGAGTTGAAGCGGGTGAGAGAACATGGAAGGCCCGCCCTTCTCAGGGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336715.11
3UTR-3UTR TCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCCATCAGTCCTTCCCTaGACCTGTCTAGCAGGCATA +
Preference number: 2 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNPSVLP*TCLAGI
Trigger: TATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGG...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCAAGAGTCAGAAGACTaGCGGCGTTTCCGACCTGGC +
Preference number: 2 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHQESED*RRFRPG
Trigger: GCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTG...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR GCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCGAAAGTTCCAGTCCATaGCTGAAGGAATTGTGGAGA +
Preference number: 2 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGESSSP*LKELWR
Trigger: TCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATAGAAGTGAAAGGCACTaGAGGGGTAGGGGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHRSERH*RGRGLE
Trigger: CTCAAGCCCCCTACCCCTGCAGTGCCTTTCACTTCT...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp CCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATACTTTTTCACTGACTTaGCATGCTCCTTCTTCATGT +
Preference number: 2 (lower is better)
Translates to: PWRLVVPNSPLPSPDERHTFSLT*HAPSSC
Trigger: ACATGAAGAAGGAGCATGGCAAGTCAGTGAAAAAGT...ATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR TCA 90 bp GGGAGATGGGTGATGAGGTATGAACGGATGCCTCAGTGTCCAAGATACAAAAGGCCATCAGTCCTTCCCTaGACCTGTCTAGCAGGCATA +
Preference number: 2 (lower is better)
Translates to: GRWVMRYERMPQCPRYKRPSVLP*TCLAGI
Trigger: TATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGG...CCTTTTGTATCTTGGACACTGAGGCATCCGTTCATACCTCATCACCCATCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336715.11
3UTR-3UTR GCA 90 bp CTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGAGAATAATCCTCAAATaGTCTTCTTCTTCAGGTTGG +
Preference number: 2 (lower is better)
Translates to: LQKQAGVSLHHRGQTLMERIILK*SSSSGW
Trigger: CCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCT...CTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTCCACACTGGGGGTTCTaGAGCAGGAGCATAAAATTA +
Preference number: 2 (lower is better)
Translates to: CLKELWRGVSIHDTPISPPHWGF*SRSIKL
Trigger: TAATTTTATGCTCCTGCTGCAGAACCCCCAGTGTGG...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATGGGCTTGAGTGCCAGTaGGTTGGGGTTGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNGLECQ*VGVGRG
Trigger: CCCCCGCCCAACCCCAACTCACTGGCACTCAAGCCC...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTGCGGAAGTGGGTCTTaGGGTTTAGAGGGCTGTCGC +
Preference number: 2 (lower is better)
Translates to: SRAKPKGRLQITRIILKCCGSGS*GLEGCR
Trigger: GCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCA...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACTTCACTGACTTGCCATaGTCCTTCTTCATGTGGGCC +
Preference number: 2 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDFTDLP*SFFMWA
Trigger: GGCCCACATGAAGAAGGAGCATGGCAAGTCAGTGAA...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR CCA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACATCCAGGTCCGCCCCTaGGGGACTTGGCTGGCGGTG +
Preference number: 2 (lower is better)
Translates to: LQITRIILKCSSSSGWRDIQVRP*GTWLAV
Trigger: CACCGCCAGCCAAGTCCCCCAGGGGCGGACCTGGAT...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAGGTGTGTCCATCCATaGCACCCCCATCAGTCCTTC +
Preference number: 2 (lower is better)
Translates to: NINVNENSPAEGSGSSRERCVHP*HPHQSF
Trigger: GAAGGACTGATGGGGGTGTCATGGATGGACACACCT...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp TGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGAATAATCCTCAAATaGTCTTCTTCTTCAGGTTGG +
Preference number: 2 (lower is better)
Translates to: WRGVSIHDTPISPSLNLSRIILK*SSSSGW
Trigger: CCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCT...AGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CCA 90 bp GGGAGATGGGTGATGAGGTATGAACGGATGCCTCAGTGTCCAAGATACAAAAGGAAAGAGAGGCCTGAATaGAGATTCGACCACAAACAG +
Preference number: 2 (lower is better)
Translates to: GRWVMRYERMPQCPRYKRKERPE*RFDHKQ
Trigger: CTGTTTGTGGTCGAATCTCCATTCAGGCCTCTCTTT...CCTTTTGTATCTTGGACACTGAGGCATCCGTTCATACCTCATCACCCATCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336715.11
3UTR-3UTR TCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATCTCCTGTGGCCCCCTTaGCAGGACTCATCCCTACCA +
Preference number: 2 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNLLWPP*QDSSLP
Trigger: TGGTAGGGATGAGTCCTGTCAAGGGGGCCACAGGAG...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp TTCAACTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGAGAATAAAGGATTCCTaGGAGCCTGTCCCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: FNSTLSKSQKKRGLNGDSRIKDS*EPVPSS
Trigger: AGAGGAGGGGACAGGCTCTCAGGAATCCTTTATTCT...CGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAGTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336715.11
3UTR-3UTR GCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACAGAATAATCCTCAAATaGTCTTCTTCTTCAGGTTGG +
Preference number: 2 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNRIILK*SSSSGW
Trigger: CCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCT...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGGACCTTACAGGTCAGTaGGCCTCCAGAAGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: QITRIILKCSSSSGWRDRDLTGQ*ASRSRQ
Trigger: CTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTC...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR TCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAGGTGTGTCCATCCATaGCACCCCCATCAGTCCTTC +
Preference number: 2 (lower is better)
Translates to: QITRIILKCSSSSGWRDRRCVHP*HPHQSF
Trigger: GAAGGACTGATGGGGGTGTCATGGATGGACACACCT...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR GCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATCCAAGCTGCAAGCCGTaGCGGACCTGGACATGTTTC +
Preference number: 2 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNPSCKP*RTWTCF
Trigger: GAAACATGTCCAGGTCCGGCACGGCTTGCAGCTTGG...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR CCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATAAGCCGTGCCGGACCTaGACATGTTTCTCTAGGATC +
Preference number: 2 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNKPCRT*TCFSRI
Trigger: GATCCTAGAGAAACATGTCCAGGTCCGGCACGGCTT...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR GCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGCACTACATAGAAGTTTaGTTTTTCCCTGCCTGTCTT +
Preference number: 2 (lower is better)
Translates to: QITRIILKCSSSSGWRDRHYIEV*FFPACL
Trigger: AAGACAGGCAGGGAAAAAGCAAACTTCTATGTAGTG...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336715.11
3UTR-3UTR CAA 90 bp GCTCTGTTCTGTGGAGCTGCTGCTCCGGTAGCGCAGAGGGCCATGGCCTCCAGACCGCCCCTGGGGGACTaGGCTGGCGGTGTCGTGCTG +
Preference number: 3 (lower is better)
Translates to: ALFCGAAAPVAQRAMASRPPLGD*AGGVVL
Trigger: CAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCGG...TCTGGAGGCCATGGCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAACAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR CCA 72 bp GCCTCCAGATCCAGGTCCGCCCCTGGGGGACTTGGCTaGCGGTGTCGTGCTGTCAGGCTCCTCACTGCAAGA +
Preference number: 3 (lower is better)
Translates to: ASRSRSAPGGLG*RCRAVRLLTAR
Trigger: TCTTGCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCGGACCTGGATCTGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CAA 90 bp CACTGCAAGAGTCAGAAGACTGGCGGCGTTTCCGACCTGGCCCCTGGGCTCTGGGCAGGGGTAGGGGGCTaGAGTGCCAGTGAGTTGGGG +
Preference number: 3 (lower is better)
Translates to: HCKSQKTGGVSDLAPGLWAGVGG*SASELG
Trigger: CCCCAACTCACTGGCACTCAAGCCCCCTACCCCTGC...CCAGAGCCCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR CAA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGCCGCCCCTGGGGGACTaGGCTGGCGGTGTCGTGCTG +
Preference number: 3 (lower is better)
Translates to: AGPGLEEESSSPCLKELWPPLGD*AGGVVL
Trigger: CAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCGG...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR GCA 72 bp CAGGTCCGCCCCTGGGGGACTTGGCTGGCGGTGTCGTaGTGTCAGGCTCCTCACTGCAAGAGTCAGAAGACT +
Preference number: 3 (lower is better)
Translates to: QVRPWGTWLAVS*CQAPHCKSQKT
Trigger: AGTCTTCTGACTCTTGCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCGGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR CCA 72 bp GGGGACTGGGCCCCAAGCTGCAAGCCGTGCCGGACCTaGACATGTTTCTCTAGGATCAGGCGGCTGCTGAAG +
Preference number: 3 (lower is better)
Translates to: GDWAPSCKPCRT*TCFSRIRRLLK
Trigger: CTTCAGCAGCCGCCTGATCCTAGAGAAACATGTCCAGGTCCGGCACGGCTTGCAGCTTGGGGCCCAGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR CCA 72 bp GTGCTGTCAGGCTCCTCACTGCAAGAGTCAGAAGACTaGCGGCGTTTCCGACCTGGCCCCTGGGCTCTGGCA +
Preference number: 3 (lower is better)
Translates to: VLSGSSLQESED*RRFRPGPWALA
Trigger: TGCCAGAGCCCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAGTGAGGAGCCTGACAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR CAA 90 bp AACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGATTGAGTGCCAGTGAGTaGGGGTTGGGCGGGGGCGGG +
Preference number: 3 (lower is better)
Translates to: NSPAEGSGSSRENQAPRGLSASE*GLGGGG
Trigger: CCCGCCCCCGCCCAACCCCAACTCACTGGCACTCAA...TCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CAA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGCATCGGGGTCAGACCTaGATGGAGGGGCCTCTTCCT +
Preference number: 3 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGHRGQT*MEGPLP
Trigger: AGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGATG...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR GCA 72 bp ACAGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATaGGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTG +
Preference number: 3 (lower is better)
Translates to: TAPCRALMNAMP*VRKWVLRFRGL
Trigger: CAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR GCA 72 bp ACTTGGCTGGCGGTGTCGTGCTGTCAGGCTCCTCACTaGAAGAGTCAGAAGACTGGCGGCGTTTCCGACCTG +
Preference number: 3 (lower is better)
Translates to: TWLAVSCCQAPH*KSQKTGGVSDL
Trigger: CAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR CCA 72 bp AGGGCACTGGCTTTACCCACACCCCGTCTCTTCTTGTaGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: RALALPTPRLFL*LMKRCRLREPG
Trigger: CCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR-3UTR CAA 90 bp TTGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCATCGGGGTCAGACCTaGATGGAGGGGCCTCTTCCT +
Preference number: 3 (lower is better)
Translates to: LPQTLQVSGPPEAGRGESHRGQT*MEGPLP
Trigger: AGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGATG...AGACTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR-3UTR CAA 90 bp CCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATGTGCGGAAGTGGGTCTaGAGGTTTAGAGGGCTGTCG +
Preference number: 3 (lower is better)
Translates to: PWRLVVPNSPLPSPDERHVRKWV*RFRGLS
Trigger: CGACAGCCCTCTAAACCTCAAGACCCACTTCCGCAC...ATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR CCA 72 bp CGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTaGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTG +
Preference number: 3 (lower is better)
Translates to: RALMNAMPCVRK*VLRFRGLSQLL
Trigger: CAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR-3UTR CAA 90 bp AGGAGCGCTCACACAGGCGACAGGGGAACTTTTTCACTGACTTGCCATGCTCCTCCACCCTTGAGGCCTTaGCTCCCTAGTTCCCGCCGA +
Preference number: 3 (lower is better)
Translates to: RSAHTGDRGTFSLTCHAPPPLRP*LPSSRR
Trigger: TCGGCGGGAACTAGGGAGCAAAGGCCTCAAGGGTGG...AGGAGCATGGCAAGTCAGTGAAAAAGTTCCCCTGTCGCCTGTGTGAGCGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR CAA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCCATCGGGGTCAGACCTaGATGGAGGGGCCTCTTCCT +
Preference number: 3 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPHRGQT*MEGPLP
Trigger: AGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGATG...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR GCA 72 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATaGCTGAAGGAATTGTGGAGAGGTGTGTCCATCCAT +
Preference number: 3 (lower is better)
Translates to: AGPGLEEESSSP*LKELWRGVSIH
Trigger: ATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR TCA 72 bp GGACCTGGACATGTTTCTCTAGGATCAGGCGGCTGCTaGAGGTGCGTTTTCCCTCTGTGCAATACCTGCAGG +
Preference number: 3 (lower is better)
Translates to: GPGHVSLGSGGC*RCVFPLCNTCR
Trigger: CCTGCAGGTATTGCACAGAGGGAAAACGCACCTTCAGCAGCCGCCTGATCCTAGAGAAACATGTCCAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR TCA 72 bp GTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTaGACCTGTCTAGCAGGCATACCTAAGTCCCATCCT +
Preference number: 3 (lower is better)
Translates to: VCPSMTPPSVLP*TCLAGIPKSHP
Trigger: AGGATGGGACTTAGGTATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CAA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCGCAGGGGTAGGGGGCTaGAGTGCCAGTGAGTTGGGG +
Preference number: 3 (lower is better)
Translates to: SRAKPKGRLQITRIILKCAGVGG*SASELG
Trigger: CCCCAACTCACTGGCACTCAAGCCCCCTACCCCTGC...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR CCA 72 bp GAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTaGAGAGGTGTGTCCATCCATGACACCCCCATCAGT +
Preference number: 3 (lower is better)
Translates to: EEESSSPCLKEL*RGVSIHDTPIS
Trigger: ACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CAA 90 bp TTGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCTCTTCTTCTTCAGGTaGGAGAGACAGGAATTAACA +
Preference number: 3 (lower is better)
Translates to: LPQTLQVSGPPEAGRGESLFFFR*ERQELT
Trigger: TGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAG...AGACTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CAA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCATGCCTGAAGGAATaGTGGAGAGGTGTGTCCATC +
Preference number: 3 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTPCLKE*WRGVSI
Trigger: GATGGACACACCTCTCCACAATTCCTTCAGGCATGG...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CAA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCTCTTCTTCTTCAGGTaGGAGAGACAGGAATTAACA +
Preference number: 3 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGLFFFR*ERQELT
Trigger: TGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAG...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CAA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAAAAACCCAAAGGGAGGTaGCAAATAACTAGAATAATC +
Preference number: 3 (lower is better)
Translates to: TRAGPGLEEESSSPCLKEKPKGR*QITRII
Trigger: GATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR CCA 72 bp AACTTTTTCACTGACTTGCCATGCTCCTTCTTCATGTaGGCCACGTATTCATCACGCTCAGGGAACCAGGAG +
Preference number: 3 (lower is better)
Translates to: NFFTDLPCSFFM*ATYSSRSGNQE
Trigger: CTCCTGGTTCCCTGAGCGTGATGAATACGTGGCCCACATGAAGAAGGAGCATGGCAAGTCAGTGAAAAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449313.5
3UTR-3UTR CAA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTCTCTTCTTCTTCAGGTaGGAGAGACAGGAATTAACA +
Preference number: 3 (lower is better)
Translates to: CLKELWRGVSIHDTPISPLFFFR*ERQELT
Trigger: TGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAG...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR-3UTR CAA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACCTCTTCTTCTTCAGGTaGGAGAGACAGGAATTAACA +
Preference number: 3 (lower is better)
Translates to: GSTLLGLQGQTQREVANNLFFFR*ERQELT
Trigger: TGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAG...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
3UTR TCA 72 bp ACTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTaGATGGAGATTCGACCACAAACAGTTTTAATGGTC +
Preference number: 3 (lower is better)
Translates to: TPHCPSHRKREA*MEIRPQTVLMV
Trigger: GACCATTAAAACTGTTTGTGGTCGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CCA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGGCAGCGGTAGCCGGTaGGAGGCAGGGCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGGSGSR*EAGPAQ
Trigger: CTGGGCTGGCCCTGCCTCCCACCGGCTACCGCTGCC...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CTGGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCGGGCTTGAGTGCCAGTaGGTTGGGGTTGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LVSPRPWRLVVPNSPLPSGLECQ*VGVGRG
Trigger: CCCCCGCCCAACCCCAACTCACTGGCACTCAAGCCC...GCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GCTGGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGGACTGGGCCCCAAGCTaGAAGCCGTGCCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: AGQSQALETSCPQQPPAEDWAPS*KPCRTW
Trigger: CCAGGTCCGGCACGGCTTGCAGCTTGGGGCCCAGTC...CTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCCTCCCCAACAGCCCCCTaGCGAGCCCTGATGAACGCC +
Preference number: 4 (lower is better)
Translates to: GQSQALETSCPQQPPAEPSPTAP*RALMNA
Trigger: GGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGA...GGGCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTGGCAGCGGTAGCCGGTaGGAGGCAGGGCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LPSPDERHAMRAEVGLEVGSGSR*EAGPAQ
Trigger: CTGGGCTGGCCCTGCCTCCCACCGGCTACCGCTGCC...AACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GCTCTGTTCTGTGGAGCTGCTGCTCCGGTAGCGCAGAGGGCCATGGCCTCCAGACGCCCCTGGGGGACTTaGCTGGCGGTGTCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: ALFCGAAAPVAQRAMASRRPWGT*LAVSCC
Trigger: ACAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCG...TCTGGAGGCCATGGCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAACAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGCCAGCCCCAGGGCACTaGCTTTACCCACACCCCGTC +
Preference number: 4 (lower is better)
Translates to: SPTAPCRALMNAMPCVRKPAPGH*LYPHPV
Trigger: GACGGGGTGTGGGTAAAGCCAGTGCCCTGGGGCTGG...CTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGGGGAGGCAGCGGATCTaGGTGGTCCCCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWGRQRI*VVPWLR
Trigger: CCTGAGCCAGGGGACCACTCAGATCCGCTGCCTCCC...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp GCTGGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGGCTGGACTGGGTCCGTaGTATCACTGTGCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGQSQALETSCPQQPPAEAGLGP*YHCAAP
Trigger: GGGGGCGGCACAGTGATATCACGGACCCAGTCCAGC...CTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATCAGGCAGCAGCGGTGTaGTGTCCGGCTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: GPPEAGRGESPPSGSDLDQAAAV*CPAAPP
Trigger: TGGTGGGGCAGCCGGACATCACACCGCTGCTGCCTG...ATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGAGCCCCCTCCCGAGTaGGAGAGGGTGCAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SGPPEAGRGESPPSGSDLEPPPE*ERVQRE
Trigger: CTCCCTCTGCACCCTCTCCCACTCGGGAGGGGGCTC...AAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGGCCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGGGGGAGGCGAGGCACTaGCAGGGATGTCCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWGEARH*QGCPWP
Trigger: AGGCCACGGACATCCCTGCCAGTGCCTCGCCTCCCC...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AAGCACAAGCCACAGTCGAGGCACTGCTGGGCACCATCCTCCACCCTCAACCCCGCGGCGTTTCCGACCTaGCCCCTGGGCTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: KHKPQSRHCWAPSSTLNPAAFPT*PLGSGT
Trigger: AGTGCCAGAGCCCAGGGGCCAGGTCGGAAACGCCGC...GGGGTTGAGGGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGGCTTGTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CACTGCAAGAGTCAGAAGACTGGCGGCGTTTCCGACCTGGCCCCTGGGCTCTGGCCTGGGGGACTTGGCTaGCGGTGTCGTGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: HCKSQKTGGVSDLAPGLWPGGLG*RCRAVR
Trigger: CCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGG...CCAGAGCCCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCAGCCCCAGGGCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGCGCCCCTGGGGGACTTaGCTGGCGGTGTCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PSPRALALPTPRLFLWLMRPWGT*LAVSCC
Trigger: ACAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCG...CATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGCCCTGGGGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGATCCAGGTCCGCCCCTaGGGGACTTGGCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWIQVRP*GTWLAV
Trigger: CACCGCCAGCCAAGTCCCCCAGGGGCGGACCTGGAT...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGACTGGGCTCTGGCACTaGAACCCCGAGCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SPTAPCRALMNAMPCVRKTGLWH*NPEPRW
Trigger: CCACCTTGGCTCGGGGTTCCAGTGCCAGAGCCCAGT...CTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436614.1
CDS-3UTR TCA 90 bp CTGCAAGAGTCAGAAGACTGGCGGCGTTTCCGACCTGGCCCCTGGGCTCTGGCACCCCACCCCCACCCTTaGGGCCTTTGCTCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: LQESEDWRRFRPGPWALAPHPHP*GLCSLV
Trigger: AACTAGGGAGCAAAGGCCTCAAGGGTGGGGGTGGGG...TGCCAGAGCCCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR TCA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGAGAAGCAGGCAGGGGTaGGTCTCCACCATCGGGGTC +
Preference number: 4 (lower is better)
Translates to: PLPSPDERHAMRAEVGLERSRQG*VSTIGV
Trigger: GACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCT...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GCTGGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGGTTCTGTGGAGCTGCTaGTCCGGTAGCGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: AGQSQALETSCPQQPPAEVLWSC*SGSAEG
Trigger: GCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAAC...CTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTCTGTGGAGCTGCTaGTCCGGTAGCGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PLPSPDERHAMRAEVGLEVLWSC*SGSAEG
Trigger: GCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAAC...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AAGCACAAGCCACAGTCGAGGCACTGCTGGGCACCATCCTCCACCCTCAACCCCTCCCCAACAGCCCCCTaGCGAGCCCTGATGAACGCC +
Preference number: 4 (lower is better)
Translates to: KHKPQSRHCWAPSSTLNPSPTAP*RALMNA
Trigger: GGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGA...GGGGTTGAGGGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGGCTTGTGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGCAAAGGGGCACCCCAGCAACTaGGGGAGGCGAGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: LFLWLMKRCRLREPGEAKGHPSN*GRRGTG
Trigger: GCCAGTGCCTCGCCTCCCCCAGTTGCTGGGGTGCCC...CTTTGCCTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGCGTTCTGGATGGTaGCCACAGGCAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: SPTAPCRALMNAMPCVRKWRSGW*PQAAQC
Trigger: GCACTGTGCTGCCTGTGGCCACCATCCAGAACGCCA...CTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATCCTCAGGCTCAGTCTTaGGGGTCAGCAGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: GPPEAGRGESPPSGSDLDPQAQS*GSAGHP
Trigger: GGGGTGCCCTGCTGACCCCCAAGACTGAGCCTGAGG...ATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGACTGGCCCCTGGGCTCTaGCACTGGAACCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: PPEAGRGESPPSGSDLDGLAPGL*HWNPEP
Trigger: TGGCTCGGGGTTCCAGTGCCAGAGCCCAGGGGCCAG...TCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGCCTGGGGGACTTGGCTaGCGGTGTCGTGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGPGGLG*RCRAVR
Trigger: CCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGG...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTATCCAGGTCCGCCCCTaGGGGACTTGGCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: LPSPDERHAMRAEVGLEVIQVRP*GTWLAV
Trigger: CACCGCCAGCCAAGTCCCCCAGGGGCGGACCTGGAT...AACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGCAAAGGGGAGGCAGCGGATCTaGGTGGTCCCCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LFLWLMKRCRLREPGEAKGRQRI*VVPWLR
Trigger: CCTGAGCCAGGGGACCACTCAGATCCGCTGCCTCCC...CTTTGCCTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR TCA 90 bp GGCAAAGCACAAGCCACAGTCGAGGCACTGCTGGGCACCATCCTCCACCCTCAAGCTGGACTGGGTCCGTaGTATCACTGTGCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: GKAQATVEALLGTILHPQAGLGP*YHCAAP
Trigger: GGGGGCGGCACAGTGATATCACGGACCCAGTCCAGC...TTGAGGGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGGCTTGTGCTTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGCCGAGCTGCTGGAAGTaGGCTGCCATGCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGPSCWK*AAMPAL
Trigger: CAAGGCTGGCATGGCAGCTCACTTCCAGCAGCTCGG...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTCCGAGCTGCTGGAAGTaGGCTGCCATGCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SGPPEAGRGESPPSGSDLPSCWK*AAMPAL
Trigger: CAAGGCTGGCATGGCAGCTCACTTCCAGCAGCTCGG...AAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCATGCGCTGGTGGGCGCTaGAGCTGCAGCGATTGGGGA +
Preference number: 4 (lower is better)
Translates to: PTPRLFLWLMKRCRLREPCAGGR*SCSDWG
Trigger: TCCCCAATCGCTGCAGCTTCAGCGCCCACCAGCGCA...TGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGCCCCACCCCCACCCTTaGGGCCTTTGCTCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGPHPHP*GLCSLV
Trigger: AACTAGGGAGCAAAGGCCTCAAGGGTGGGGGTGGGG...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GCTGGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGATCGGGGTCAGACCTTaGTGGAGGGGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AGQSQALETSCPQQPPAEIGVRP*WRGLFL
Trigger: GAGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGAT...CTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CTGCAAGAGTCAGAAGACTGGCGGCGTTTCCGACCTGGCCCCTGGGCTCTGGCAGGTGTGATGTCCGGCTaGCCCACCATCTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: LQESEDWRRFRPGPWALAGVMSG*PTIWSR
Trigger: CCTTGACCAGATGGTGGGGCAGCCGGACATCACACC...TGCCAGAGCCCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp CTGGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCCCGGCACTGTTCCTTaGACTCCAGGCAGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: LVSPRPWRLVVPNSPLPSPGTVP*TPGSES
Trigger: GCTTTCGCTGCCTGGAGTGCAAGGAACAGTGCCGGG...GCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGCGCTGGGGCAGCAAGTaGTGGTCGAAGTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLPSPDERHAMRAEVGLERWGSK*WSKCEE
Trigger: CTCCTCACACTTCGACCAGCACTTGCTGCCCCAGCG...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR GCA 90 bp CTGCAAGAGTCAGAAGACTGGCGGCGTTTCCGACCTGGCCCCTGGGCTCTGGCACTCAGTAGCAGGGGCTaGCCCTCCCTGAGAAACAGC +
Preference number: 4 (lower is better)
Translates to: LQESEDWRRFRPGPWALALSSRG*PSLRNS
Trigger: GCTGTTTCTCAGGGAGGGGCAGCCCCTGCTACTGAG...TGCCAGAGCCCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp GGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATCCACAGTCGAGGCACTaGTGGGCACCATCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GPPEAGRGESPPSGSDLDPQSRH*WAPSST
Trigger: GGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGG...ATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CCCAGCCCCAGGGCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGCCACAGTCGAGGCACTaGTGGGCACCATCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PSPRALALPTPRLFLWLMPQSRH*WAPSST
Trigger: GGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGG...CATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGCCCTGGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAGACTTGTTCCGCTCCTaGTGCGGGCCGAGACCCGGC +
Preference number: 4 (lower is better)
Translates to: NSPAEGSGSSRENQAPRGDLFRS*CGPRPG
Trigger: GCCGGGTCTCGGCCCGCACCAGGAGCGGAACAAGTC...TCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGAGGTGGCTGCATGCCTaGGCCATTCTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGRWLHA*AILLGQ
Trigger: CTGGCCCAGGAGAATGGCCCAGGCATGCAGCCACCT...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGGGGGAGGCGAGGCACTaGCAGGGATGTCCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWGEARH*QGCPWP
Trigger: AGGCCACGGACATCCCTGCCAGTGCCTCGCCTCCCC...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp CTCTTGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGGCCTTAGGCAGGGCTTaGGGCACCAGGCCTAGCACG +
Preference number: 4 (lower is better)
Translates to: LLPQTLQVSGPPEAGRGEALGRA*GTRPST
Trigger: CGTGCTAGGCCTGGTGCCCCAAGCCCTGCCTAAGGC...CTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGATGTGTAAGCAGAGGTaGCCGGGGCAGCAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWMCKQR*PGQQAA
Trigger: AGCCGCCTGCTGCCCCGGCCACCTCTGCTTACACAT...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGACTGGCCCCTGGGCTCTaGCACTGGAACCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: NSPAEGSGSSRENQAPRGLAPGL*HWNPEP
Trigger: TGGCTCGGGGTTCCAGTGCCAGAGCCCAGGGGCCAG...TCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTGCGGCGTTTCCGACCTaGCCCCTGGGCTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: CRALMNAMPCVRKWVLRFAAFPT*PLGSGT
Trigger: AGTGCCAGAGCCCAGGGGCCAGGTCGGAAACGCCGC...AAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGCCACAGCGCCCCTGGGGGACTTaGCTGGCGGTGTCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CVRKWVLRFRGLSQLLPQRPWGT*LAVSCC
Trigger: ACAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCG...CTGTGGCAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCCCAGGCTCTTCTCCAATaGGAAGGCATCCCCACACTC +
Preference number: 4 (lower is better)
Translates to: GQSQALETSCPQQPPAEPQALLQ*EGIPTL
Trigger: GAGTGTGGGGATGCCTTCTCATTGGAGAAGAGCCTG...GGGCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGCAGGCAGCAGCGGTGTaGTGTCCGGCTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREQAAAV*CPAAPP
Trigger: TGGTGGGGCAGCCGGACATCACACCGCTGCTGCCTG...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCAAGAAGCAGGCAGGGGTaGGTCTCCACCATCGGGGTC +
Preference number: 4 (lower is better)
Translates to: PQTLQVSGPPEAGRGESPRSRQG*VSTIGV
Trigger: GACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCT...TGGAGACTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTGGGCTTGAGTGCCAGTaGGTTGGGGTTGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: EEWRVHSTRTPGPNPKGGGLECQ*VGVGRG
Trigger: CCCCCGCCCAACCCCAACTCACTGGCACTCAAGCCC...ACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGGGCTTGAGTGCCAGTaGGTTGGGGTTGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREGLECQ*VGVGRG
Trigger: CCCCCGCCCAACCCCAACTCACTGGCACTCAAGCCC...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGCTCCTGTGGCCCCCTTaGCAGGACTCATCCCTACCA +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWLLWPP*QDSSLP
Trigger: TGGTAGGGATGAGTCCTGTCAAGGGGGCCACAGGAG...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGGCCAGGGCCTCAGACTaGTCGGGACACACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWARASD*SGHTVF
Trigger: GAACACTGTGTGTCCCGAGCAGTCTGAGGCCCTGGC...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp TCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGGTCCTTGTGTTCACGTaGATGCAGGAGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SPTAPCRALMNAMPCVRKVLVFT*MQEQAA
Trigger: TGCAGCCTGCTCCTGCATGCACGTGAACACAAGGAC...CTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGGTGTGATGTCCGGCTaGCCCACCATCTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGGVMSG*PTIWSR
Trigger: CCTTGACCAGATGGTGGGGCAGCCGGACATCACACC...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGACACGGCGAGAGACGTaGAGACAGGCCTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: HTPSLLVADETVSAQGARTRRET*RQASRR
Trigger: TCTCCGGGAGGCCTGTCTGCACGTCTCTCGCCGTGT...CCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GCTCTGTTCTGTGGAGCTGCTGCTCCGGTAGCGCAGAGGGCCATGGCCTCCAGACCAAGCTGCAAGCCGTaGCGGACCTGGACATGTTTC +
Preference number: 4 (lower is better)
Translates to: ALFCGAAAPVAQRAMASRPSCKP*RTWTCF
Trigger: GAAACATGTCCAGGTCCGGCACGGCTTGCAGCTTGG...TCTGGAGGCCATGGCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAACAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGGACTGGGCCCCAAGCTaGAAGCCGTGCCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LMNAMPCVRKWVLRFRGLDWAPS*KPCRTW
Trigger: CCAGGTCCGGCACGGCTTGCAGCTTGGGGCCCAGTC...CAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GGCAAAGCACAAGCCACAGTCGAGGCACTGCTGGGCACCATCCTCCACCCTCAACCACAGTCGAGGCACTaGTGGGCACCATCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GKAQATVEALLGTILHPQPQSRH*WAPSST
Trigger: GGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGG...TTGAGGGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGGCTTGTGCTTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGGACTTGTTCCGCTCCTaGTGCGGGCCGAGACCCGGC +
Preference number: 4 (lower is better)
Translates to: MPCVRKWVLRFRGLSQLLDLFRS*CGPRPG
Trigger: GCCGGGTCTCGGCCCGCACCAGGAGCGGAACAAGTC...CAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGCAGCGGATCTGAGTaGTCCCCTGGCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEEGSGSE*SPGSGP
Trigger: TGGCCCTGAGCCAGGGGACCACTCAGATCCGCTGCC...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTGGCAGCGGATCTGAGTaGTCCCCTGGCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CRALMNAMPCVRKWVLRFGSGSE*SPGSGP
Trigger: TGGCCCTGAGCCAGGGGACCACTCAGATCCGCTGCC...AAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCGAGCCCCCTCCCGAGTaGGAGAGGGTGCAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGEPPPE*ERVQRE
Trigger: CTCCCTCTGCACCCTCTCCCACTCGGGAGGGGGCTC...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTGGGCACCCCAGCAACTaGGGGAGGCGAGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: WRGVSIHDTPISPSLNLSGHPSN*GRRGTG
Trigger: GCCAGTGCCTCGCCTCCCCCAGTTGCTGGGGTGCCC...AGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGGCCTTAGGCAGGGCTTaGGGCACCAGGCCTAGCACG +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWALGRA*GTRPST
Trigger: CGTGCTAGGCCTGGTGCCCCAAGCCCTGCCTAAGGC...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTAGGCCTCCACCAGGCTaGACTGGGTCCGTGATATCA +
Preference number: 4 (lower is better)
Translates to: SPLPSPDERHAMRAEVGLRPPPG*TGSVIS
Trigger: TGATATCACGGACCCAGTCCAGCCTGGTGGAGGCCT...AAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACGGCAGCGGTAGCCGGTaGGAGGCAGGGCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNGSGSR*EAGPAQ
Trigger: CTGGGCTGGCCCTGCCTCCCACCGGCTACCGCTGCC...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAAGGCGGCGGGCGCAGTaGTTGCAGGTGACCTCGATG +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEERRRAQ*LQVTSM
Trigger: CATCGAGGTCACCTGCAACCACTGCGCCCGCCGCCT...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTCAGCAGGCGGCTCTGTaGAGAGCGGCAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: EEWRVHSTRTPGPNPKGGQQAAL*RAAGQG
Trigger: CCCCTGTCCTGCCGCTCTCCACAGAGCCGCCTGCTG...ACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGTTATGCATGCGCTGGTaGGCGCTGAAGCTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: PLPSPDERHAMRAEVGLELCMRW*ALKLQR
Trigger: TCGCTGCAGCTTCAGCGCCCACCAGCGCATGCATAA...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGTGGGGCAGCAAGTGCTaGTCGAAGTGTGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PLPSPDERHAMRAEVGLEWGSKC*SKCEER
Trigger: CCTCTCCTCACACTTCGACCAGCACTTGCTGCCCCA...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR CCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGGGGGCTCAGGGGAGCTaGGTACTTCCTCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWGAQGS*VLPPLL
Trigger: CAGAAGAGGAGGAAGTACCCAGCTCCCCTGAGCCCC...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAATTCCGACCTGGCCCCTaGGCTCTGGCACTGGAACCC +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEEFRPGP*ALALEP
Trigger: GGGTTCCAGTGCCAGAGCCCAGGGGCCAGGTCGGAA...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTGGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCAAGAGTCAGAAGACTaGCGGCGTTTCCGACCTGGC +
Preference number: 4 (lower is better)
Translates to: LVSPRPWRLVVPNSPLPSQESED*RRFRPG
Trigger: GCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTG...GCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAACCTGGGGGACTTGGCTaGCGGTGTCGTGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: TRAGPGLEEESSSPCLKEPGGLG*RCRAVR
Trigger: CCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGG...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGACCTGGGGGACTTGGCTaGCGGTGTCGTGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: NSPAEGSGSSRENQAPRGPGGLG*RCRAVR
Trigger: CCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGG...TCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTCCTGGGGGACTTGGCTaGCGGTGTCGTGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: CRALMNAMPCVRKWVLRFPGGLG*RCRAVR
Trigger: CCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGG...AAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGATCCAGGTCCGCCCCTaGGGGACTTGGCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREIQVRP*GTWLAV
Trigger: CACCGCCAGCCAAGTCCCCCAGGGGCGGACCTGGAT...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAACCAGCCCCAGGGCACTaGCTTTACCCACACCCCGTC +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEEPAPGH*LYPHPV
Trigger: GACGGGGTGTGGGTAAAGCCAGTGCCCTGGGGCTGG...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGCAAAGCCAGCCCCAGGGCACTaGCTTTACCCACACCCCGTC +
Preference number: 4 (lower is better)
Translates to: LFLWLMKRCRLREPGEAKPAPGH*LYPHPV
Trigger: GACGGGGTGTGGGTAAAGCCAGTGCCCTGGGGCTGG...CTTTGCCTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CAGGGCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGGCTAGGACCTGGGGATaGTGGGGGCTGCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QGTGFTHTPSLLVADETVARTWG*WGLQLS
Trigger: GGAGAGCTGCAGCCCCCATCATCCCCAGGTCCTAGC...CACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGGCCCTGGAGACTGCTTaGAGAAGGGCACCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LQKQAGVSLHHRGQTLMEALETA*RRAPQQ
Trigger: TTGCTGGGGTGCCCTTCTTCAAGCAGTCTCCAGGGC...CTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR TCA 90 bp CCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGTCTTCCTTCAAGGGCTaGCAGACGGGCACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: PRLFLWLMKRCRLREPGESSFKG*QTGTLG
Trigger: CCCCAAAGTGCCCGTCTGTCAGCCCTTGAAGGAAGA...CTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR TCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGCTGGACTGGGTCCGTaGTATCACTGTGCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREAGLGP*YHCAAP
Trigger: GGGGGCGGCACAGTGATATCACGGACCCAGTCCAGC...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTCCTCATGACCAAATGTaGGCACTGCATGACGAGCCC +
Preference number: 4 (lower is better)
Translates to: SPLPSPDERHAMRAEVGLPHDQM*ALHDEP
Trigger: GGGCTCGTCATGCAGTGCTCACATTTGGTCATGAGG...AAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCTGCGCTGGTGGGCGCTaGAGCTGCAGCGATTGGGGA +
Preference number: 4 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGCAGGR*SCSDWG
Trigger: TCCCCAATCGCTGCAGCTTCAGCGCCCACCAGCGCA...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGACCCCCAAACACCACTaGACAGCTGGGGCACCTGTA +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWTPKHH*TAGAPV
Trigger: TACAGGTGCCCCAGCTGTTCAGTGGTGTTTGGGGGT...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp CTGCAAGAGTCAGAAGACTGGCGGCGTTTCCGACCTGGCCCCTGGGCTCTGGCACGCTTGATGCCCTCGTaGTTAACTCTGACATGGCGC +
Preference number: 4 (lower is better)
Translates to: LQESEDWRRFRPGPWALARLMPS*LTLTWR
Trigger: GCGCCATGTCAGAGTTAATCACGAGGGCATCAAGCG...TGCCAGAGCCCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGATCGGGGTCAGACCTTaGTGGAGGGGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LQKQAGVSLHHRGQTLMEIGVRP*WRGLFL
Trigger: GAGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGAT...CTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAATCGGGGTCAGACCTTaGTGGAGGGGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PTPRLFLWLMKRCRLREPIGVRP*WRGLFL
Trigger: GAGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGAT...TGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGGGTGCGGAAGTGGGTCTTaGGGTTTAGAGGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: PEAGRGESPPSGSDLDGGCGSGS*GLEGCR
Trigger: GCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCA...CCCTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCGGGCTTGAGTGCCAGTaGGTTGGGGTTGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSGLECQ*VGVGRG
Trigger: CCCCCGCCCAACCCCAACTCACTGGCACTCAAGCCC...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATTGTTCCGCTCCTGGTaGGGGCCGAGACCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKLFRSW*GPRPGG
Trigger: ACCGCCGGGTCTCGGCCCGCACCAGGAGCGGAACAA...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp TGTCTTGGTCACTACCACCTCTTCCCTGAGAAGGGCGGGCCTTCCATGTTCTCTTTGTTCCGCTCCTGGTaGGGGCCGAGACCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: CLGHYHLFPEKGGPSMFSLFRSW*GPRPGG
Trigger: ACCGCCGGGTCTCGGCCCGCACCAGGAGCGGAACAA...AGAGAACATGGAAGGCCCGCCCTTCTCAGGGAAGAGGTGGTAGTGACCAAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR GCA 90 bp GGCAAAGCACAAGCCACAGTCGAGGCACTGCTGGGCACCATCCTCCACCCTCAACCCGGCACTGTTCCTTaGACTCCAGGCAGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: GKAQATVEALLGTILHPQPGTVP*TPGSES
Trigger: GCTTTCGCTGCCTGGAGTGCAAGGAACAGTGCCGGG...TTGAGGGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGGCTTGTGCTTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAAGGTTGGGCACACATTaGTGGTGGCCCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEERLGTH*WWPQGQ
Trigger: CTGCCCCTGGGGCCACCAGCAATGTGTGCCCAACCT...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGTTGGGCACACATTaGTGGTGGCCCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: NSPAEGSGSSRENQAPRGRLGTH*WWPQGQ
Trigger: CTGCCCCTGGGGCCACCAGCAATGTGTGCCCAACCT...TCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAACACGGCGAGAGACGTaGAGACAGGCCTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: NSPAEGSGSSRENQAPRGTRRET*RQASRR
Trigger: TCTCCGGGAGGCCTGTCTGCACGTCTCTCGCCGTGT...TCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGATGAACGCCATGCCATaGGTGCGGAAGTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PLPSPDERHAMRAEVGLEMNAMP*VRKWVL
Trigger: CAAGACCCACTTCCGCACGCATGGCATGGCGTTCAT...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCTCCCCAACAGCCCCCTaGCGAGCCCTGATGAACGCC +
Preference number: 4 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGSPTAP*RALMNA
Trigger: GGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGA...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGATCCCCAACAGCCCCCTaGCGAGCCCTGATGAACGCC +
Preference number: 4 (lower is better)
Translates to: RALMNAMPCVRKWVLRFRSPTAP*RALMNA
Trigger: GGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGA...TCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGCCATGGTCAGAGGCCTaGGCTGGAACTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWPWSEA*AGTPGP
Trigger: TGGCCCTGGAGTTCCAGCCCAGGCCTCTGACCATGG...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTCCATGGTCAGAGGCCTaGGCTGGAACTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CRALMNAMPCVRKWVLRFPWSEA*AGTPGP
Trigger: TGGCCCTGGAGTTCCAGCCCAGGCCTCTGACCATGG...AAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp CACTGCAAGAGTCAGAAGACTGGCGGCGTTTCCGACCTGGCCCCTGGGCTCTGGTCCACCAGGCTGGACTaGGTCCGTGATATCACTGTG +
Preference number: 4 (lower is better)
Translates to: HCKSQKTGGVSDLAPGLWSTRLD*VRDITV
Trigger: CACAGTGATATCACGGACCCAGTCCAGCCTGGTGGA...CCAGAGCCCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCGGCAGCGGTAGCCGGTaGGAGGCAGGGCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTGSGSR*EAGPAQ
Trigger: CTGGGCTGGCCCTGCCTCCCACCGGCTACCGCTGCC...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGCCACAGGGCTGCCCCACCATCTaGTCAAGGGCTACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: CVRKWVLRFRGLSQLLPQGCPTI*SRATGL
Trigger: GAGGCCTGTAGCCCTTGACCAGATGGTGGGGCAGCC...CTGTGGCAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATCAGCAGGCGGCTCTGTaGAGAGCGGCAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHQQAAL*RAAGQG
Trigger: CCCCTGTCCTGCCGCTCTCCACAGAGCCGCCTGCTG...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCCAGCAGGCGGCTCTGTaGAGAGCGGCAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPQQAAL*RAAGQG
Trigger: CCCCTGTCCTGCCGCTCTCCACAGAGCCGCCTGCTG...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAATGTGTAAGCAGAGGTaGCCGGGGCAGCAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEEMCKQR*PGQQAA
Trigger: AGCCGCCTGCTGCCCCGGCCACCTCTGCTTACACAT...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGATTGGGCACACATTGCTaGTGGCCCCAGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RALMNAMPCVRKWVLRFRLGTHC*WPQGQG
Trigger: CCCCTGCCCCTGGGGCCACCAGCAATGTGTGCCCAA...TCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGGGCTCAGGGGAGCTaGGTACTTCCTCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: HTPSLLVADETVSAQGARGAQGS*VLPPLL
Trigger: CAGAAGAGGAGGAAGTACCCAGCTCCCCTGAGCCCC...CCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAACTGGCCCCTGGGCTCTaGCACTGGAACCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKLAPGL*HWNPEP
Trigger: TGGCTCGGGGTTCCAGTGCCAGAGCCCAGGGGCCAG...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCGCGGCGTTTCCGACCTaGCCCCTGGGCTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPAAFPT*PLGSGT
Trigger: AGTGCCAGAGCCCAGGGGCCAGGTCGGAAACGCCGC...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCGCCCCTGGGGGACTTaGCTGGCGGTGTCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGRPWGT*LAVSCC
Trigger: ACAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCG...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGTCTTGGTCACTACCACCTCTTCCCTGAGAAGGGCGGGCCTTCCATGTTCTCTCGCCCCTGGGGGACTTaGCTGGCGGTGTCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CLGHYHLFPEKGGPSMFSRPWGT*LAVSCC
Trigger: ACAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCG...AGAGAACATGGAAGGCCCGCCCTTCTCAGGGAAGAGGTGGTAGTGACCAAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CCA 90 bp GCTCTGTTCTGTGGAGCTGCTGCTCCGGTAGCGCAGAGGGCCATGGCCTCCAGACCCCGTCTCTTCTTGTaGCTGATGAAACGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: ALFCGAAAPVAQRAMASRPRLFL*LMKRCR
Trigger: CCGACACCGTTTCATCAGCCACAAGAAGAGACGGGG...TCTGGAGGCCATGGCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAACAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGACCAGCCCCAGGGCACTaGCTTTACCCACACCCCGTC +
Preference number: 4 (lower is better)
Translates to: RALMNAMPCVRKWVLRFRPAPGH*LYPHPV
Trigger: GACGGGGTGTGGGTAAAGCCAGTGCCCTGGGGCTGG...TCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGACCTTACAGGTCAGTaGGCCTCCAGAAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGDLTGQ*ASRSRQ
Trigger: CTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTC...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTCAGTCCCAGGCCTTaGAGACTAGTTGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: PLPSPDERHAMRAEVGLEVSPRP*RLVVPN
Trigger: GTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGAC...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
3UTR CAA 72 bp CCCAGGGCACTGGCTTTACCCACACCCCGTCTCTTCTaGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PRALALPTPRLF*WLMKRCRLREP
Trigger: TGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGCCCTGGAGACTGCTTaGAGAAGGGCACCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEEALETA*RRAPQQ
Trigger: TTGCTGGGGTGCCCTTCTTCAAGCAGTCTCCAGGGC...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGCCTCATGACCAAATGTaGGCACTGCATGACGAGCCC +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWPHDQM*ALHDEP
Trigger: GGGCTCGTCATGCAGTGCTCACATTTGGTCATGAGG...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCAGGCAGCAGCGGTGTaGTGTCCGGCTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNQAAAV*CPAAPP
Trigger: TGGTGGGGCAGCCGGACATCACACCGCTGCTGCCTG...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATGCGCTGGTGGGCGCTaGAGCTGCAGCGATTGGGGA +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKCAGGR*SCSDWG
Trigger: TCCCCAATCGCTGCAGCTTCAGCGCCCACCAGCGCA...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGTGCGCTGGTGGGCGCTaGAGCTGCAGCGATTGGGGA +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGCAGGR*SCSDWG
Trigger: TCCCCAATCGCTGCAGCTTCAGCGCCCACCAGCGCA...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGACCCCCAAACACCACTaGACAGCTGGGGCACCTGTA +
Preference number: 4 (lower is better)
Translates to: LQKQAGVSLHHRGQTLMETPKHH*TAGAPV
Trigger: TACAGGTGCCCCAGCTGTTCAGTGGTGTTTGGGGGT...CTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR TCA 90 bp CTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGGTGCTGGTCGAAGTGTaGGGAGAGGAGGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LQKQAGVSLHHRGQTLMEVLVEV*GEEGFV
Trigger: CACAAACCCCTCCTCTCCTCACACTTCGACCAGCAC...CTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR TCA 90 bp TCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGACTGATGGGTGTTCTTaGGATGTTCCAGCATGGTCC +
Preference number: 4 (lower is better)
Translates to: SPTAPCRALMNAMPCVRKTDGCS*DVPAWS
Trigger: GGACCATGCTGGAACATCTCAAGAACACCCATCAGT...CTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR TCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGGGATCAGGCGGCTGCTaGAGGTGCGTTTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWGSGGC*RCVFPL
Trigger: CAGAGGGAAAACGCACCTTCAGCAGCCGCCTGATCC...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCAGAAGCAGGCAGGGGTaGGTCTCCACCATCGGGGTC +
Preference number: 4 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGRSRQG*VSTIGV
Trigger: GACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCT...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGATGCGGAAGTGGGTCTTaGGGTTTAGAGGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: PPEAGRGESPPSGSDLDGCGSGS*GLEGCR
Trigger: GCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCA...TCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGAAACAGGTGGCTGCATaGCTGGGCCATTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQKQAGVSLHHRGQTLMEKQVAA*LGHSPG
Trigger: CCCAGGAGAATGGCCCAGGCATGCAGCCACCTGTTT...CTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGATTGCTGTCCTCATCTaGAGCCTCGGCCCCACTAGA +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWIAVLI*SLGPTR
Trigger: TCTAGTGGGGCCGAGGCTGCAGATGAGGACAGCAAT...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp CCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGATTGCTGTCCTCATCTaGAGCCTCGGCCCCACTAGA +
Preference number: 4 (lower is better)
Translates to: PRLFLWLMKRCRLREPGEIAVLI*SLGPTR
Trigger: TCTAGTGGGGCCGAGGCTGCAGATGAGGACAGCAAT...CTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp TGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGCCACAGCTGCTGGAAGTGAGCTaGCATGCCAGCCTTGTCCCG +
Preference number: 4 (lower is better)
Translates to: CVRKWVLRFRGLSQLLPQLLEVS*HASLVP
Trigger: CGGGACAAGGCTGGCATGGCAGCTCACTTCCAGCAG...CTGTGGCAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCACACGGCGAGAGACGTaGAGACAGGCCTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGTRRET*RQASRR
Trigger: TCTCCGGGAGGCCTGTCTGCACGTCTCTCGCCGTGT...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGCTCAGTAGCAGGGGCTaGCCCTCCCTGAGAAACAGC +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWLSSRG*PSLRNS
Trigger: GCTGTTTCTCAGGGAGGGGCAGCCCCTGCTACTGAG...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTCCAAGCTGCAAGCCGTaGCGGACCTGGACATGTTTC +
Preference number: 4 (lower is better)
Translates to: LPSPDERHAMRAEVGLEVPSCKP*RTWTCF
Trigger: GAAACATGTCCAGGTCCGGCACGGCTTGCAGCTTGG...AACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CTCTTGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGCCAAGCTGCAAGCCGTaGCGGACCTGGACATGTTTC +
Preference number: 4 (lower is better)
Translates to: LLPQTLQVSGPPEAGRGEPSCKP*RTWTCF
Trigger: GAAACATGTCCAGGTCCGGCACGGCTTGCAGCTTGG...CTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTGACTGGGCCCCAAGCTaGAAGCCGTGCCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPDWAPS*KPCRTW
Trigger: CCAGGTCCGGCACGGCTTGCAGCTTGGGGCCCAGTC...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGTGGCTGGCGGTGTCGTaGTGTCAGGCTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: ALALPTPRLFLWLMKRCRWLAVS*CQAPHC
Trigger: GCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCA...CCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTCTGTGGAGCTGCTaGTCCGGTAGCGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREVLWSC*SGSAEG
Trigger: GCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAAC...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCATCTGTTCTGTGGAGCTaGTGCTCCGGTAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: PTPRLFLWLMKRCRLREPSVLWS*CSGSAE
Trigger: CTCTGCGCTACCGGAGCAGCAGCTCCACAGAACAGA...TGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCTCCCCAACAGCCCCCTaGCGAGCCCTGATGAACGCC +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPSPTAP*RALMNA
Trigger: GGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGA...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGACTACAGAAATGTCTaGCGGTGGCAGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: SGPPEAGRGESPPSGSDLDYRNV*RWQAMV
Trigger: GACCATGGCCTGCCACCGCCAGACATTTCTGTAGTC...AAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGGCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp CCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAAGAGTGGGGAGTTCCTaGGAGGGAAGGTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PPEAGRGESPPSGSDLDGRVGSS*EGRFRA
Trigger: AGCCCTGAACCTTCCCTCCCAGGAACTCCCCACTCT...TCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp TGTCTTGGTCACTACCACCTCTTCCCTGAGAAGGGCGGGCCTTCCATGTTCTCTGGCAGCGGATCTGAGTaGTCCCCTGGCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CLGHYHLFPEKGGPSMFSGSGSE*SPGSGP
Trigger: TGGCCCTGAGCCAGGGGACCACTCAGATCCGCTGCC...AGAGAACATGGAAGGCCCGCCCTTCTCAGGGAAGAGGTGGTAGTGACCAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGAGGTGGCTGCATGCCTaGGCCATTCTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQRERWLHA*AILLGQ
Trigger: CTGGCCCAGGAGAATGGCCCAGGCATGCAGCCACCT...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCGGGCACCCCAGCAACTaGGGGAGGCGAGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTGHPSN*GRRGTG
Trigger: GCCAGTGCCTCGCCTCCCCCAGTTGCTGGGGTGCCC...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCAGCCCCAGGGCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGTCAGCATGGCAGTACTaGCGTTCTGGATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PSPRALALPTPRLFLWLMSAWQY*RSGWWP
Trigger: TGGCCACCATCCAGAACGCCAGTACTGCCATGCTGA...CATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGCCCTGGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCGCCTTAGGCAGGGCTTaGGGCACCAGGCCTAGCACG +
Preference number: 4 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSALGRA*GTRPST
Trigger: CGTGCTAGGCCTGGTGCCCCAAGCCCTGCCTAAGGC...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGTGGTGGGCTCAGGTTTaGCCTATAGGCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LQKQAGVSLHHRGQTLMEWWAQV*PIGREQ
Trigger: CTGCTCCCTGCCTATAGGCCAAACCTGAGCCCACCA...CTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCAGCCCAGCCTCAGCTaGTGGGCTCAGGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: ALALPTPRLFLWLMKRCRQPSLS*WAQVWP
Trigger: AGGCCAAACCTGAGCCCACCAGCTGAGGCTGGGCTG...CCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CAGGGCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGCAGCCCAGCCTCAGCTaGTGGGCTCAGGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QGTGFTHTPSLLVADETVQPSLS*WAQVWP
Trigger: AGGCCAAACCTGAGCCCACCAGCTGAGGCTGGGCTG...CACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGAGGCGGCGGGCGCAGTaGTTGCAGGTGACCTCGATG +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGRRRAQ*LQVTSM
Trigger: CATCGAGGTCACCTGCAACCACTGCGCCCGCCGCCT...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATTGGGCACACATTGCTaGTGGCCCCAGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKLGTHC*WPQGQG
Trigger: CCCCTGCCCCTGGGGCCACCAGCAATGTGTGCCCAA...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGTCGCAGTGCGACGTCTaGATGTGGGACTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWSQCDV*MWDLME
Trigger: CTCCATCAAGTCCCACATCCAGACGTCGCACTGCGA...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAACCTCAGGCTCAGTCTTaGGGGTCAGCAGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKPQAQS*GSAGHP
Trigger: GGGGTGCCCTGCTGACCCCCAAGACTGAGCCTGAGG...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATTCCGACCTGGCCCCTaGGCTCTGGCACTGGAACCC +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKFRPGP*ALALEP
Trigger: GGGTTCCAGTGCCAGAGCCCAGGGGCCAGGTCGGAA...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTGCGGCGTTTCCGACCTaGCCCCTGGGCTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPAAFPT*PLGSGT
Trigger: AGTGCCAGAGCCCAGGGGCCAGGTCGGAAACGCCGC...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACATCCAGGTCCGCCCCTaGGGGACTTGGCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNIQVRP*GTWLAV
Trigger: CACCGCCAGCCAAGTCCCCCAGGGGCGGACCTGGAT...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGCCCCGTCTCTTCTTGTaGCTGATGAAACGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGPRLFL*LMKRCR
Trigger: CCGACACCGTTTCATCAGCCACAAGAAGAGACGGGG...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGCCCCGTCTCTTCTTGTaGCTGATGAAACGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWPRLFL*LMKRCR
Trigger: CCGACACCGTTTCATCAGCCACAAGAAGAGACGGGG...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCCCAGCCCCAGGGCACTaGCTTTACCCACACCCCGTC +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPPAPGH*LYPHPV
Trigger: GACGGGGTGTGGGTAAAGCCAGTGCCCTGGGGCTGG...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTCTTGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGGACCTTACAGGTCAGTaGGCCTCCAGAAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLPQTLQVSGPPEAGRGEDLTGQ*ASRSRQ
Trigger: CTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTC...CTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCAGCCCCAGGGCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGCCATGCGTGCGGAAGTaGGTCTTGAGGTTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: PSPRALALPTPRLFLWLMPCVRK*VLRFRG
Trigger: CCCTCTAAACCTCAAGACCCACTTCCGCACGCATGG...CATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGCCCTGGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGCCATGCGTGCGGAAGTaGGTCTTGAGGTTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWPCVRK*VLRFRG
Trigger: CCCTCTAAACCTCAAGACCCACTTCCGCACGCATGG...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGGAAGAAACTGGGCTCTaGCACTGGAACCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: LQKQAGVSLHHRGQTLMEEETGL*HWNPEP
Trigger: TGGCTCGGGGTTCCAGTGCCAGAGCCCAGTTTCTTC...CTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436614.1
CDS-3UTR TCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGAGGTGGATCAGGATCTaGGGGGACCTGAGTTACAGT +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWRWIRI*GDLSYS
Trigger: ACTGTAACTCAGGTCCCCTCAGATCCTGATCCACCT...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGCCCAGTAGCTGTCTTTaGAGGTTGCACCATCACCAC +
Preference number: 4 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGPSSCL*RLHHHH
Trigger: GTGGTGATGGTGCAACCTTCAAAGACAGCTACTGGG...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGGGCCCAGTAGCTGTCTTTaGAGGTTGCACCATCACCAC +
Preference number: 4 (lower is better)
Translates to: PEAGRGESPPSGSDLDGGPSSCL*RLHHHH
Trigger: GTGGTGATGGTGCAACCTTCAAAGACAGCTACTGGG...CCCTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GGCAAAGCACAAGCCACAGTCGAGGCACTGCTGGGCACCATCCTCCACCCTCAAGGGCTACAGGCCTCATaGCCAAATGTGAGCACTGCA +
Preference number: 4 (lower is better)
Translates to: GKAQATVEALLGTILHPQGLQAS*PNVSTA
Trigger: TGCAGTGCTCACATTTGGTCATGAGGCCTGTAGCCC...TTGAGGGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGGCTTGTGCTTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATCCGAGCTGCTGGAAGTaGGCTGCCATGCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHPSCWK*AAMPAL
Trigger: CAAGGCTGGCATGGCAGCTCACTTCCAGCAGCTCGG...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AAGCACAAGCCACAGTCGAGGCACTGCTGGGCACCATCCTCCACCCTCAACCCCTCTGGATGTGGGACTTaGTGGAGTTCACACCCCCAA +
Preference number: 4 (lower is better)
Translates to: KHKPQSRHCWAPSSTLNPSGCGT*WSSHPQ
Trigger: TTGGGGGTGTGAACTCCATCAAGTCCCACATCCAGA...GGGGTTGAGGGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGGCTTGTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR TCA 90 bp CCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCAATCAGCTTGGCCTGCTaGGTTTGGAAGCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: PQTLQVSGPPEAGRGESPISLAC*VWKLGC
Trigger: GCATCCCAGCTTCCAAACTCAGCAGGCCAAGCTGAT...TGGAGACTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR TCA 90 bp CCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGAGGGGTTTGTGAGTaGAGACTGTGTCGCACATGG +
Preference number: 4 (lower is better)
Translates to: PTPRLFLWLMKRCRLREPGGVCE*RLCRTW
Trigger: CCATGTGCGACACAGTCTTCACTCACAAACCCCTCC...TGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR TCA 90 bp CTCTTGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGGAGAGGAGGGGTTTGTaGGTGAAGACTGTGTCGCAC +
Preference number: 4 (lower is better)
Translates to: LLPQTLQVSGPPEAGRGEERRGL*VKTVSH
Trigger: GTGCGACACAGTCTTCACTCACAAACCCCTCCTCTC...CTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR TCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGTGCGGAAGTGGGTCTTaGGGTTTAGAGGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWCGSGS*GLEGCR
Trigger: GCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCA...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATGCGGAAGTGGGTCTTaGGGTTTAGAGGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: TRAGPGLEEESSSPCLKECGSGS*GLEGCR
Trigger: GCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCA...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAATGCGGAAGTGGGTCTTaGGGTTTAGAGGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEECGSGS*GLEGCR
Trigger: GCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCA...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGTTCCAGTCCATGCCTaGAGGAATTGTGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SGPPEAGRGESPPSGSDLVPVHA*RNCGEV
Trigger: CACCTCTCCACAATTCCTTCAGGCATGGACTGGAAC...AAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGGCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTCTCCTGTGGCCCCCTTaGCAGGACTCATCCCTACCA +
Preference number: 4 (lower is better)
Translates to: EEWRVHSTRTPGPNPKGGLLWPP*QDSSLP
Trigger: TGGTAGGGATGAGTCCTGTCAAGGGGGCCACAGGAG...ACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCGCCAGGGCCTCAGACTaGTCGGGACACACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGARASD*SGHTVF
Trigger: GAACACTGTGTGTCCCGAGCAGTCTGAGGCCCTGGC...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGCTTTTTCTTTCCAGGTaGCCCCACTGGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LQKQAGVSLHHRGQTLMELFLSR*PHWEEQ
Trigger: CTGCTCCTCCCAGTGGGGGCACCTGGAAAGAAAAAG...CTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp CTCTTCCCTGAGAAGGGCGGGCCTTCCATGTTCTCTCACCCGCTTCAACTCCACAAACAGGTGGCTGCATaGCTGGGCCATTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LFPEKGGPSMFSHPLQLHKQVAA*LGHSPG
Trigger: CCCAGGAGAATGGCCCAGGCATGCAGCCACCTGTTT...GTGGAGTTGAAGCGGGTGAGAGAACATGGAAGGCCCGCCCTTCTCAGGGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR GCA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGACCAAATGTGAGCACTaGATGACGAGCCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWTKCEH*MTSPLS
Trigger: GGACAAGGGGCTCGTCATGCAGTGCTCACATTTGGT...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CCCAGCCCCAGGGCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGACCAAATGTGAGCACTaGATGACGAGCCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PSPRALALPTPRLFLWLMTKCEH*MTSPLS
Trigger: GGACAAGGGGCTCGTCATGCAGTGCTCACATTTGGT...CATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGCCCTGGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGTGTGATGTCCGGCTaGCCCACCATCTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: GFTHTPSLLVADETVSAQGVMSG*PTIWSR
Trigger: CCTTGACCAGATGGTGGGGCAGCCGGACATCACACC...CTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAAAGGTTGGGCACACATTaGTGGTGGCCCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKRLGTH*WWPQGQ
Trigger: CTGCCCCTGGGGCCACCAGCAATGTGTGCCCAACCT...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTGGGGGTCGATTCTTATaGATGCGCTGGTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: EEWRVHSTRTPGPNPKGGGGRFL*MRWWAL
Trigger: CAGCGCCCACCAGCGCATGCATAAGAATCGACCCCC...ACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATACACGGCGAGAGACGTaGAGACAGGCCTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHTRRET*RQASRR
Trigger: TCTCCGGGAGGCCTGTCTGCACGTCTCTCGCCGTGT...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CCCAGCCCCAGGGCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGTGTCAGGCTCCTCACTaGAAGAGTCAGAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: PSPRALALPTPRLFLWLMCQAPH*KSQKTG
Trigger: GCCAGTCTTCTGACTCTTGCAGTGAGGAGCCTGACA...CATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGCCCTGGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCTGGCTGGCGGTGTCGTaGTGTCAGGCTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPWLAVS*CQAPHC
Trigger: GCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCA...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATGTTCTGTGGAGCTGCTaGTCCGGTAGCGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHVLWSC*SGSAEG
Trigger: GCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAAC...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGTCTGTTCTGTGGAGCTaGTGCTCCGGTAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWSVLWS*CSGSAE
Trigger: CTCTGCGCTACCGGAGCAGCAGCTCCACAGAACAGA...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGATCTGTTCTGTGGAGCTaGTGCTCCGGTAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: NSPAEGSGSSRENQAPRGSVLWS*CSGSAE
Trigger: CTCTGCGCTACCGGAGCAGCAGCTCCACAGAACAGA...TCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCCCACAGTCGAGGCACTaGTGGGCACCATCCTCCACC +
Preference number: 4 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSPQSRH*WAPSST
Trigger: GGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGG...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTCTTCCCTGAGAAGGGCGGGCCTTCCATGTTCTCTCACCCGCTTCAACTCCACAGAAATGTCTGGCGGTaGCAGGCCATGGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LFPEKGGPSMFSHPLQLHRNVWR*QAMVRG
Trigger: GCCTCTGACCATGGCCTGCCACCGCCAGACATTTCT...GTGGAGTTGAAGCGGGTGAGAGAACATGGAAGGCCCGCCCTTCTCAGGGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CCA 90 bp TTGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTAGAAATGTCTGGCGGTaGCAGGCCATGGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LPQTLQVSGPPEAGRGESRNVWR*QAMVRG
Trigger: GCCTCTGACCATGGCCTGCCACCGCCAGACATTTCT...AGACTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTGTTACCCCAGCAGCCTaGGCCCCGTCTCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPVTPAA*APSPAE
Trigger: CTCAGCAGGAGACGGGGCCCAGGCTGCTGGGGTAAC...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACGTTACCCCAGCAGCCTaGGCCCCGTCTCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSTLLGLQGQTQREVANNVTPAA*APSPAE
Trigger: CTCAGCAGGAGACGGGGCCCAGGCTGCTGGGGTAAC...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAAAGAGTGGGGAGTTCCTaGGAGGGAAGGTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TRAGPGLEEESSSPCLKERVGSS*EGRFRA
Trigger: AGCCCTGAACCTTCCCTCCCAGGAACTCCCCACTCT...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCGGGGAGGCGAGGCACTaGCAGGGATGTCCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTGEARH*QGCPWP
Trigger: AGGCCACGGACATCCCTGCCAGTGCCTCGCCTCCCC...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGTGGCGTTCTGGATGGTaGCCACAGGCAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREWRSGW*PQAAQC
Trigger: GCACTGTGCTGCCTGTGGCCACCATCCAGAACGCCA...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAACCCAGCCTCAGCTGGTaGGCTCAGGTTTGGCCTATA +
Preference number: 4 (lower is better)
Translates to: TRAGPGLEEESSSPCLKEPSLSW*AQVWPI
Trigger: TATAGGCCAAACCTGAGCCCACCAGCTGAGGCTGGG...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCTTCTTCATGTGGGCCACGTATTCATCACGCTCAGGGAACCAGGAGTGACACAAGGCGGCGGGCGCAGTaGTTGCAGGTGACCTCGATG +
Preference number: 4 (lower is better)
Translates to: PSSCGPRIHHAQGTRSDTRRRAQ*LQVTSM
Trigger: CATCGAGGTCACCTGCAACCACTGCGCCCGCCGCCT...TGTGTCACTCCTGGTTCCCTGAGCGTGATGAATACGTGGCCCACATGAAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCGGCTGCCCCACCATCTaGTCAAGGGCTACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSGCPTI*SRATGL
Trigger: GAGGCCTGTAGCCCTTGACCAGATGGTGGGGCAGCC...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTATGTGTAAGCAGAGGTaGCCGGGGCAGCAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: WRGVSIHDTPISPSLNLSMCKQR*PGQQAA
Trigger: AGCCGCCTGCTGCCCCGGCCACCTCTGCTTACACAT...AGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATGATTGGGGAGCATCATaGGGCAGGTTGGGCACACAT +
Preference number: 4 (lower is better)
Translates to: PWRLVVPNSPLPSPDERHDWGAS*GRLGTH
Trigger: ATGTGTGCCCAACCTGCCCCATGATGCTCCCCAATC...ATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGGATTGGGGAGCATCATaGGGCAGGTTGGGCACACAT +
Preference number: 4 (lower is better)
Translates to: LQKQAGVSLHHRGQTLMEDWGAS*GRLGTH
Trigger: ATGTGTGCCCAACCTGCCCCATGATGCTCCCCAATC...CTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTCTTGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTTCTTATGCATGCGCTaGTGGGCGCTGAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLPQTLQVSGPPEAGRGEFLCMR*WALKLQ
Trigger: CTGCAGCTTCAGCGCCCACCAGCGCATGCATAAGAA...CTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GCTCTGTTCTGTGGAGCTGCTGCTCCGGTAGCGCAGAGGGCCATGGCCTCCAGAGATGGGTCTGAAAATTaGCTTGCAGGAAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: ALFCGAAAPVAQRAMASRDGSEN*LAGSCP
Trigger: GGGGCAACTTCCTGCAAGCCAATTTTCAGACCCATC...TCTGGAGGCCATGGCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAACAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGTGCGACGTCTGGATGTaGGACTTGATGGAGTTCACA +
Preference number: 4 (lower is better)
Translates to: PLPSPDERHAMRAEVGLECDVWM*DLMEFT
Trigger: TGTGAACTCCATCAAGTCCCACATCCAGACGTCGCA...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR CCA 90 bp CTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGCAAAGGTGGGCATGGGCACTTaGCCCAGACTTGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LFLWLMKRCRLREPGEAKVGMGT*PRLEGH
Trigger: ATGGCCTTCAAGTCTGGGCCAAGTGCCCATGCCCAC...CTTTGCCTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR CCA 90 bp GCTGGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGAGACTGTGTCGCACATaGCGCACTTGTAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: AGQSQALETSCPQQPPAERLCRT*RTCRSA
Trigger: AGCTGATCTACAAGTGCGCCATGTGCGACACAGTCT...CTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR CCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGTGGGGCAGCAAGTGCTaGTCGAAGTGTGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWWGSKC*SKCEER
Trigger: CCTCTCCTCACACTTCGACCAGCACTTGCTGCCCCA...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCCTCAGGCTCAGTCTTaGGGGTCAGCAGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNPQAQS*GSAGHP
Trigger: GGGGTGCCCTGCTGACCCCCAAGACTGAGCCTGAGG...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGGGGCTCAGGGGAGCTaGGTACTTCCTCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREGAQGS*VLPPLL
Trigger: CAGAAGAGGAGGAAGTACCCAGCTCCCCTGAGCCCC...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGCAAAGGGGCTCAGGGGAGCTaGGTACTTCCTCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLLVADETVSAQGARGGKGAQGS*VLPPLL
Trigger: CAGAAGAGGAGGAAGTACCCAGCTCCCCTGAGCCCC...TTTGCCTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGAAGCCGTGCCGGACCTaGACATGTTTCTCTAGGATC +
Preference number: 4 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGKPCRT*TCFSRI
Trigger: GATCCTAGAGAAACATGTCCAGGTCCGGCACGGCTT...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTTCCGACCTGGCCCCTaGGCTCTGGCACTGGAACCC +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPFRPGP*ALALEP
Trigger: GGGTTCCAGTGCCAGAGCCCAGGGGCCAGGTCGGAA...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGCAAGAGTCAGAAGACTaGCGGCGTTTCCGACCTGGC +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWQESED*RRFRPG
Trigger: GCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTG...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCACCCCGTCTCTTCTTGTaGCTGATGAAACGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: PTPRLFLWLMKRCRLREPPRLFL*LMKRCR
Trigger: CCGACACCGTTTCATCAGCCACAAGAAGAGACGGGG...TGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTGACCTTACAGGTCAGTaGGCCTCCAGAAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CRALMNAMPCVRKWVLRFDLTGQ*ASRSRQ
Trigger: CTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTC...AAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGACCATGCGTGCGGAAGTaGGTCTTGAGGTTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: PPEAGRGESPPSGSDLDGPCVRK*VLRFRG
Trigger: CCCTCTAAACCTCAAGACCCACTTCCGCACGCATGG...TCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCAGTCAGTCCCAGGCCTTaGAGACTAGTTGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: PQTLQVSGPPEAGRGESPVSPRP*RLVVPN
Trigger: GTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGAC...TGGAGACTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTGCGGCGTTTCCGACCTaGCCCCTGAAGAAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: CRALMNAMPCVRKWVLRFAAFPT*PLKKSG
Trigger: TCCACTTTTCTTCAGGGGCCAGGTCGGAAACGCCGC...AAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436614.1
CDS-3UTR TCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGGCCCTGGAGACTGCTTaGAGAAGGGCACCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGALETA*RRAPQQ
Trigger: TTGCTGGGGTGCCCTTCTTCAAGCAGTCTCCAGGGC...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCCGAGCTGCTGGAAGTaGGCTGCCATGCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNPSCWK*AAMPAL
Trigger: CAAGGCTGGCATGGCAGCTCACTTCCAGCAGCTCGG...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAATCAGCTTGGCCTGCTaGGTTTGGAAGCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: NSPAEGSGSSRENQAPRGISLAC*VWKLGC
Trigger: GCATCCCAGCTTCCAAACTCAGCAGGCCAAGCTGAT...TCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp CTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGTCCAAGCGCCCAGACTaGTGGGTGTTCTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: LQKQAGVSLHHRGQTLMESKRPD*WVFLRC
Trigger: ACATCTCAAGAACACCCATCAGTCTGGGCGCTTGGA...CTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR TCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTCCCCACCCCCACCCTTaGGGCCTTTGCTCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPPHPHP*GLCSLV
Trigger: AACTAGGGAGCAAAGGCCTCAAGGGTGGGGGTGGGG...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAACGCTTGATGCCCTCGTaGTTAACTCTGACATGGCGC +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEERLMPS*LTLTWR
Trigger: GCGCCATGTCAGAGTTAATCACGAGGGCATCAAGCG...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CAGGGCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGCCCTCAACCCCATCATaGGGCTCTGTTCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: QGTGFTHTPSLLVADETVPSTPS*GSVLWS
Trigger: GCTCCACAGAACAGAGCCTCATGATGGGGTTGAGGG...CACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCCCTCAACCCCATCATaGGGCTCTGTTCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: ALALPTPRLFLWLMKRCRPSTPS*GSVLWS
Trigger: GCTCCACAGAACAGAGCCTCATGATGGGGTTGAGGG...CCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTAGAAGCAGGCAGGGGTaGGTCTCCACCATCGGGGTC +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPRSRQG*VSTIGV
Trigger: GACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCT...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGGTGTGTCCATCCATaGCACCCCCATCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWRCVHP*HPHQSF
Trigger: GAAGGACTGATGGGGGTGTCATGGATGGACACACCT...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TTGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTAGGTGTGTCCATCCATaGCACCCCCATCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPQTLQVSGPPEAGRGESRCVHP*HPHQSF
Trigger: GAAGGACTGATGGGGGTGTCATGGATGGACACACCT...AGACTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCCTCCTGTGGCCCCCTTaGCAGGACTCATCCCTACCA +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPLLWPP*QDSSLP
Trigger: TGGTAGGGATGAGTCCTGTCAAGGGGGCCACAGGAG...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGAAACAGGTGGCTGCATaGCTGGGCCATTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREKQVAA*LGHSPG
Trigger: CCCAGGAGAATGGCCCAGGCATGCAGCCACCTGTTT...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAAGGGCTGCAGCTCTCCTaGTTCAAGGCCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKGLQLS*FKAPNG
Trigger: ACCATTGGGGGCCTTGAAGCAGGAGAGCTGCAGCCC...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCGCGAGCCACACTGGCTaGCATCAGCATGGCAGTACT +
Preference number: 4 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGASHTG*HQHGST
Trigger: AGTACTGCCATGCTGATGGCAGCCAGTGTGGCTCGC...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGCGAGCCACACTGGCTaGCATCAGCATGGCAGTACT +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREASHTG*HQHGST
Trigger: AGTACTGCCATGCTGATGGCAGCCAGTGTGGCTCGC...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGCTGTCTTTGAAGGTTaGACCATCACCACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: PTPRLFLWLMKRCRLREPAVFEG*TITTEA
Trigger: TGCCTCGGTGGTGATGGTGCAACCTTCAAAGACAGC...TGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTCCGTGATATCACTGTaGCGCCCCCTGTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: EEWRVHSTRTPGPNPKGGSVISL*RPLYLA
Trigger: GGCCAAGTACAGGGGGCGGCACAGTGATATCACGGA...ACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGGTCCTTGTGTTCACGTaGATGCAGGAGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWVLVFT*MQEQAA
Trigger: TGCAGCCTGCTCCTGCATGCACGTGAACACAAGGAC...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGCCACAGGTCCTTGTGTTCACGTaGATGCAGGAGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: CVRKWVLRFRGLSQLLPQVLVFT*MQEQAA
Trigger: TGCAGCCTGCTCCTGCATGCACGTGAACACAAGGAC...CTGTGGCAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCCGGCACTGTTCCTTaGACTCCAGGCAGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGPGTVP*TPGSES
Trigger: GCTTTCGCTGCCTGGAGTGCAAGGAACAGTGCCGGG...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTCTGCTGGAAGTGAGCTaGCATGCCAGCCTTGTCCCG +
Preference number: 4 (lower is better)
Translates to: WRGVSIHDTPISPSLNLSLLEVS*HASLVP
Trigger: CGGGACAAGGCTGGCATGGCAGCTCACTTCCAGCAG...AGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAACTGCTGGAAGTGAGCTaGCATGCCAGCCTTGTCCCG +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKLLEVS*HASLVP
Trigger: CGGGACAAGGCTGGCATGGCAGCTCACTTCCAGCAG...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGGGGGGTCGATTCTTATaGATGCGCTGGTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGGGRFL*MRWWAL
Trigger: CAGCGCCCACCAGCGCATGCATAAGAATCGACCCCC...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
58% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGTGGCTTGCAGGAAGTTaGCCCCACACTCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWWLAGS*PHTQDR
Trigger: TCTGTCCTGAGTGTGGGGGCAACTTCCTGCAAGCCA...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAATGGAAAACCTCGCAGTaGGACGTCTGGATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEEWKTSQ*DVWMWD
Trigger: GTCCCACATCCAGACGTCGCACTGCGAGGTTTTCCA...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR GCA 90 bp TGTCTTGGTCACTACCACCTCTTCCCTGAGAAGGGCGGGCCTTCCATGTTCTCTCGCTGGGGCAGCAAGTaGTGGTCGAAGTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: CLGHYHLFPEKGGPSMFSRWGSK*WSKCEE
Trigger: CTCCTCACACTTCGACCAGCACTTGCTGCCCCAGCG...AGAGAACATGGAAGGCCCGCCCTTCTCAGGGAAGAGGTGGTAGTGACCAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR GCA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGTTCACTGACTTGCCATaGTCCTTCTTCATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGFTDLP*SFFMWA
Trigger: GGCCCACATGAAGAAGGAGCATGGCAAGTCAGTGAA...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATGACTGGGCCCCAAGCTaGAAGCCGTGCCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHDWAPS*KPCRTW
Trigger: CCAGGTCCGGCACGGCTTGCAGCTTGGGGCCCAGTC...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GGCAAAGCACAAGCCACAGTCGAGGCACTGCTGGGCACCATCCTCCACCCTCAATGTCAGGCTCCTCACTaGAAGAGTCAGAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: GKAQATVEALLGTILHPQCQAPH*KSQKTG
Trigger: GCCAGTCTTCTGACTCTTGCAGTGAGGAGCCTGACA...TTGAGGGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGGCTTGTGCTTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGCAAATCTGTTCTGTGGAGCTaGTGCTCCGGTAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLLVADETVSAQGARGGKSVLWS*CSGSAE
Trigger: CTCTGCGCTACCGGAGCAGCAGCTCCACAGAACAGA...TTTGCCTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGATGAACGCCATGCCATaGGTGCGGAAGTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWMNAMP*VRKWVL
Trigger: CAAGACCCACTTCCGCACGCATGGCATGGCGTTCAT...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGCAAAGAAGGCCAGGGCCCTTaGTTCTGCAGGGGTAAACTC +
Preference number: 4 (lower is better)
Translates to: SLLVADETVSAQGARGGKEGQGP*FCRGKL
Trigger: GAGTTTACCCCTGCAGAAGCAAGGGCCCTGGCCTTC...TTTGCCTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR CCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTCCATGGTCAGAGGCCTaGGCTGGAACTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPPWSEA*AGTPGP
Trigger: TGGCCCTGGAGTTCCAGCCCAGGCCTCTGACCATGG...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTAGGTGGCTGCATGCCTaGGCCATTCTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPRWLHA*AILLGQ
Trigger: CTGGCCCAGGAGAATGGCCCAGGCATGCAGCCACCT...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGCTTCAAGGCCCCCAATaGTGGGGAAGAAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWLQGPQ*WGRNRW
Trigger: CCACCTGTTTCTTCCCCACCATTGGGGGCCTTGAAG...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGGAAGACTTGTCCACTaGCCCCTCATCATCATCTTC +
Preference number: 4 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGGRLVH*PLIIIF
Trigger: GAAGATGATGATGAGGGGCCAGTGGACAAGTCTTCC...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGTGGCGTTCTGGATGGTaGCCACAGGCAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGWRSGW*PQAAQC
Trigger: GCACTGTGCTGCCTGTGGCCACCATCCAGAACGCCA...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATCCACCAGGCTGGACTaGGTCCGTGATATCACTGTG +
Preference number: 4 (lower is better)
Translates to: TRAGPGLEEESSSPCLKESTRLD*VRDITV
Trigger: CACAGTGATATCACGGACCCAGTCCAGCCTGGTGGA...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTAGGCCTCCACCAGGCTaGACTGGGTCCGTGATATCA +
Preference number: 4 (lower is better)
Translates to: EEWRVHSTRTPGPNPKGGRPPPG*TGSVIS
Trigger: TGATATCACGGACCCAGTCCAGCCTGGTGGAGGCCT...ACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTGGTGGGCTCAGGTTTaGCCTATAGGCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LMNAMPCVRKWVLRFRGLWWAQV*PIGREQ
Trigger: CTGCTCCCTGCCTATAGGCCAAACCTGAGCCCACCA...CAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTCCCAGCCTCAGCTGGTaGGCTCAGGTTTGGCCTATA +
Preference number: 4 (lower is better)
Translates to: EEWRVHSTRTPGPNPKGGPSLSW*AQVWPI
Trigger: TATAGGCCAAACCTGAGCCCACCAGCTGAGGCTGGG...ACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGCAAACCCAGCCTCAGCTGGTaGGCTCAGGTTTGGCCTATA +
Preference number: 4 (lower is better)
Translates to: SLLVADETVSAQGARGGKPSLSW*AQVWPI
Trigger: TATAGGCCAAACCTGAGCCCACCAGCTGAGGCTGGG...TTTGCCTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACGGCTGCCCCACCATCTaGTCAAGGGCTACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GSTLLGLQGQTQREVANNGCPTI*SRATGL
Trigger: GAGGCCTGTAGCCCTTGACCAGATGGTGGGGCAGCC...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGCATCATGGGGCAGGTTaGGCACACATTGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: MPCVRKWVLRFRGLSQLLHHGAG*AHIAGG
Trigger: GCCACCAGCAATGTGTGCCCAACCTGCCCCATGATG...CAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGATGGGTCTGAAAATTaGCTTGCAGGAAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: PRLFLWLMKRCRLREPGEDGSEN*LAGSCP
Trigger: GGGGCAACTTCCTGCAAGCCAATTTTCAGACCCATC...CTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTGTGGGCATGGGCACTTaGCCCAGACTTGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: EEWRVHSTRTPGPNPKGGVGMGT*PRLEGH
Trigger: ATGGCCTTCAAGTCTGGGCCAAGTGCCCATGCCCAC...ACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp TGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCAAGCCGTGCCGGACCTaGACATGTTTCTCTAGGATC +
Preference number: 4 (lower is better)
Translates to: CHRPYRSVGLQKQAGVSLKPCRT*TCFSRI
Trigger: GATCCTAGAGAAACATGTCCAGGTCCGGCACGGCTT...GAGACTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCTGGCCCCTGGGCTCTaGCACTGGAACCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHLAPGL*HWNPEP
Trigger: TGGCTCGGGGTTCCAGTGCCAGAGCCCAGGGGCCAG...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGCCACAGCCCCGTCTCTTCTTGTaGCTGATGAAACGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: CVRKWVLRFRGLSQLLPQPRLFL*LMKRCR
Trigger: CCGACACCGTTTCATCAGCCACAAGAAGAGACGGGG...CTGTGGCAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATAAAAGTGGAAGAAACTaGGCTCTGGCACTGGAACCC +
Preference number: 4 (lower is better)
Translates to: GPPEAGRGESPPSGSDLDKSGRN*ALALEP
Trigger: GGGTTCCAGTGCCAGAGCCCAGTTTCTTCCACTTTT...ATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436614.1
3UTR CAA 72 bp CTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTaGAGGTTTAGAGGGCTGTCGCAGCTCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LMNAMPCVRKWV*RFRGLSQLLPQ
Trigger: CTGTGGCAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCCCATTCTGCATTCGATaGGGCCCCACAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPPFCIR*GPTGPS
Trigger: AGAAGGGCCTGTGGGGCCTCATCGAATGCAGAATGG...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGGCTCAGGGCCAAAATaGGCAAACAGGTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREGSGPK*ANRSKG
Trigger: TCCCTTGGACCTGTTTGCTCATTTTGGCCCTGAGCC...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp CTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGACCACGGGAGGCAGCGGATCTaGGTGGTCCCCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LHIVQVTEKERPEWRFDHGRQRI*VVPWLR
Trigger: CCTGAGCCAGGGGACCACTCAGATCCGCTGCCTCCC...GTGGTCGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR TCA 90 bp AACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGACCCAGTAGCTGTCTTTaGAGGTTGCACCATCACCAC +
Preference number: 4 (lower is better)
Translates to: NSPAEGSGSSRENQAPRGPSSCL*RLHHHH
Trigger: GTGGTGATGGTGCAACCTTCAAAGACAGCTACTGGG...TCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGCAGGCTCTTCTCCAATaGGAAGGCATCCCCACACTC +
Preference number: 4 (lower is better)
Translates to: LMNAMPCVRKWVLRFRGLQALLQ*EGIPTL
Trigger: GAGTGTGGGGATGCCTTCTCATTGGAGAAGAGCCTG...CAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGGGGCTACAGGCCTCATaGCCAAATGTGAGCACTGCA +
Preference number: 4 (lower is better)
Translates to: LMNAMPCVRKWVLRFRGLGLQAS*PNVSTA
Trigger: TGCAGTGCTCACATTTGGTCATGAGGCCTGTAGCCC...CAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCACCCCCAAACACCACTaGACAGCTGGGGCACCTGTA +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPTPKHH*TAGAPV
Trigger: TACAGGTGCCCCAGCTGTTCAGTGGTGTTTGGGGGT...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAAGTGCTGGTCGAAGTGTaGGGAGAGGAGGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKVLVEV*GEEGFV
Trigger: CACAAACCCCTCCTCTCCTCACACTTCGACCAGCAC...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCAGGGAACCAGGAGTaGCACAGGCCACAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPSGNQE*HRPQVQ
Trigger: CTGGACCTGTGGCCTGTGTCACTCCTGGTTCCCTGA...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATCCCTCAACCCCATCATaGGGCTCTGTTCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHPSTPS*GSVLWS
Trigger: GCTCCACAGAACAGAGCCTCATGATGGGGTTGAGGG...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGGTTCCAGTCCATGCCTaGAGGAATTGTGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWVPVHA*RNCGEV
Trigger: CACCTCTCCACAATTCCTTCAGGCATGGACTGGAAC...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp ATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGGAAGAAACAGGTGGCTaGATGCCTGGGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: MPCVRKWVLRFRGLSQLLEETGG*MPGPFS
Trigger: GGAGAATGGCCCAGGCATGCAGCCACCTGTTTCTTC...CAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTGGGCTGCAGCTCTCCTaGTTCAAGGCCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPGLQLS*FKAPNG
Trigger: ACCATTGGGGGCCTTGAAGCAGGAGAGCTGCAGCCC...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp TGGACATGTTTCTCTAGGATCAGGCGGCTGCTGAAGGTGCGTTTTCCCTCTGTGGGGCTGCAGCTCTCCTaGTTCAAGGCCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: WTCFSRIRRLLKVRFPSVGLQLS*FKAPNG
Trigger: ACCATTGGGGGCCTTGAAGCAGGAGAGCTGCAGCCC...CACAGAGGGAAAACGCACCTTCAGCAGCCGCCTGATCCTAGAGAAACATGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATGCAAGAGGGCTCTGGTaGCCTGGAGACTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHARGLW*PGDCLK
Trigger: CTTCAAGCAGTCTCCAGGGCACCAGAGCCCTCTTGC...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCGCAAGAGGGCTCTGGTaGCCTGGAGACTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSARGLW*PGDCLK
Trigger: CTTCAAGCAGTCTCCAGGGCACCAGAGCCCTCTTGC...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGACCAAATGTGAGCACTaGATGACGAGCCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWTKCEH*MTSPLS
Trigger: GGACAAGGGGCTCGTCATGCAGTGCTCACATTTGGT...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTCCCGGCACTGTTCCTTaGACTCCAGGCAGCGAAAGC +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPPGTVP*TPGSES
Trigger: GCTTTCGCTGCCTGGAGTGCAAGGAACAGTGCCGGG...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGTTCACTGACTTGCCATaGTCCTTCTTCATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LQKQAGVSLHHRGQTLMEFTDLP*SFFMWA
Trigger: GGCCCACATGAAGAAGGAGCATGGCAAGTCAGTGAA...CTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCCCAAGCTGCAAGCCGTaGCGGACCTGGACATGTTTC +
Preference number: 4 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSPSCKP*RTWTCF
Trigger: GAAACATGTCCAGGTCCGGCACGGCTTGCAGCTTGG...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATTCTGTTCTGTGGAGCTaGTGCTCCGGTAGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHSVLWS*CSGSAE
Trigger: CTCTGCGCTACCGGAGCAGCAGCTCCACAGAACAGA...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GCTGGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGGAAAGTTCCAGTCCATaGCTGAAGGAATTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: AGQSQALETSCPQQPPAEESSSP*LKELWR
Trigger: TCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC...CTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp ATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGAGAAGTGAAAGGCACTaGAGGGGTAGGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: MPCVRKWVLRFRGLSQLLRSERH*RGRGLE
Trigger: CTCAAGCCCCCTACCCCTGCAGTGCCTTTCACTTCT...CAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACTCCTACACCTGGTTCTaGCTTCCCTGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNSYTWF*LPWASR
Trigger: CCTGGAGGCCCAGGGAAGCCAGAACCAGGTGTAGGA...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp CGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGATTCACTTCCTACACCTaGTTCTGGCTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RALMNAMPCVRKWVLRFRFTSYT*FWLPWA
Trigger: GGCCCAGGGAAGCCAGAACCAGGTGTAGGAAGTGAA...TCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp TGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTCAAGGCCCCCAATGGTaGGGAAGAAACAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WRGVSIHDTPISPSLNLSQGPQW*GRNRWL
Trigger: CAGCCACCTGTTTCTTCCCCACCATTGGGGGCCTTG...AGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp GAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTCTTCAAGGCCCCCAATaGTGGGGAAGAAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: EEWRVHSTRTPGPNPKGGLQGPQ*WGRNRW
Trigger: CCACCTGTTTCTTCCCCACCATTGGGGGCCTTGAAG...ACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACTGGCGTTCTGGATGGTaGCCACAGGCAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNWRSGW*PQAAQC
Trigger: GCACTGTGCTGCCTGTGGCCACCATCCAGAACGCCA...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGTCAGCATGGCAGTACTaGCGTTCTGGATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQRESAWQY*RSGWWP
Trigger: TGGCCACCATCCAGAACGCCAGTACTGCCATGCTGA...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGATGGCTGCCATCAGCATaGCAGTACTGGCGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RALMNAMPCVRKWVLRFRWLPSA*QYWRSG
Trigger: TCCAGAACGCCAGTACTGCCATGCTGATGGCAGCCA...TCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGTCTTGGTCACTACCACCTCTTCCCTGAGAAGGGCGGGCCTTCCATGTTCTCTAGGCCTCCACCAGGCTaGACTGGGTCCGTGATATCA +
Preference number: 4 (lower is better)
Translates to: CLGHYHLFPEKGGPSMFSRPPPG*TGSVIS
Trigger: TGATATCACGGACCCAGTCCAGCCTGGTGGAGGCCT...AGAGAACATGGAAGGCCCGCCCTTCTCAGGGAAGAGGTGGTAGTGACCAAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCAGGCCTCCACCAGGCTaGACTGGGTCCGTGATATCA +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPRPPPG*TGSVIS
Trigger: TGATATCACGGACCCAGTCCAGCCTGGTGGAGGCCT...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCTGGTGGGCTCAGGTTTaGCCTATAGGCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPWWAQV*PIGREQ
Trigger: CTGCTCCCTGCCTATAGGCCAAACCTGAGCCCACCA...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTCCCAGCCTCAGCTGGTaGGCTCAGGTTTGGCCTATA +
Preference number: 4 (lower is better)
Translates to: WRGVSIHDTPISPSLNLSPSLSW*AQVWPI
Trigger: TATAGGCCAAACCTGAGCCCACCAGCTGAGGCTGGG...AGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCAGCCCAGCCTCAGCTaGTGGGCTCAGGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTQPSLS*WAQVWP
Trigger: AGGCCAAACCTGAGCCCACCAGCTGAGGCTGGGCTG...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCCATCATGGGGCAGGTTaGGCACACATTGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPHHGAG*AHIAGG
Trigger: GCCACCAGCAATGTGTGCCCAACCTGCCCCATGATG...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGCAAACAGATGGGGCACTTGTaGAAAACCTCGCAGTGCGAC +
Preference number: 4 (lower is better)
Translates to: SLLVADETVSAQGARGGKQMGHL*KTSQCD
Trigger: GTCGCACTGCGAGGTTTTCCACAAGTGCCCCATCTG...TTTGCCTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR CCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAAGCCGTGCCGGACCTaGACATGTTTCTCTAGGATC +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWKPCRT*TCFSRI
Trigger: GATCCTAGAGAAACATGTCCAGGTCCGGCACGGCTT...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAAAGCCGTGCCGGACCTaGACATGTTTCTCTAGGATC +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEEKPCRT*TCFSRI
Trigger: GATCCTAGAGAAACATGTCCAGGTCCGGCACGGCTT...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCCAAGAGTCAGAAGACTaGCGGCGTTTCCGACCTGGC +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPQESED*RRFRPG
Trigger: GCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTG...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCCAAGAGTCAGAAGACTaGCGGCGTTTCCGACCTGGC +
Preference number: 4 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSQESED*RRFRPG
Trigger: GCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTG...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCCATGCGTGCGGAAGTaGGTCTTGAGGTTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGPCVRK*VLRFRG
Trigger: CCCTCTAAACCTCAAGACCCACTTCCGCACGCATGG...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAAGGCTCAGGGCCAAAATaGGCAAACAGGTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKGSGPK*ANRSKG
Trigger: TCCCTTGGACCTGTTTGCTCATTTTGGCCCTGAGCC...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACTCTTCCTTCAAGGGCTaGCAGACGGGCACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNSSFKG*QTGTLG
Trigger: CCCCAAAGTGCCCGTCTGTCAGCCCTTGAAGGAAGA...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp CCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGGGGAGTTACAGTCCTTGTaGTATTCCCGCAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: PEAGRGESPPSGSDLDGGELQSL*YSRRMF
Trigger: AAACATCCTGCGGGAATATCACAAGGACTGTAACTC...CCCTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR TCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAACAGGCTCTTCTCCAATaGGAAGGCATCCCCACACTC +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKQALLQ*EGIPTL
Trigger: GAGTGTGGGGATGCCTTCTCATTGGAGAAGAGCCTG...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCGGGCTACAGGCCTCATaGCCAAATGTGAGCACTGCA +
Preference number: 4 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSGLQAS*PNVSTA
Trigger: TGCAGTGCTCACATTTGGTCATGAGGCCTGTAGCCC...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCGGGCTACAGGCCTCATaGCCAAATGTGAGCACTGCA +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPGLQAS*PNVSTA
Trigger: TGCAGTGCTCACATTTGGTCATGAGGCCTGTAGCCC...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAAGGAGGGGTTTGTGAGTaGAGACTGTGTCGCACATGG +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKGGVCE*RLCRTW
Trigger: CCATGTGCGACACAGTCTTCACTCACAAACCCCTCC...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCGAGAGGAGGGGTTTGTaGGTGAAGACTGTGTCGCAC +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPERRGL*VKTVSH
Trigger: GTGCGACACAGTCTTCACTCACAAACCCCTCCTCTC...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGACTGATGGGTGTTCTTaGGATGTTCCAGCATGGTCC +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWTDGCS*DVPAWS
Trigger: GGACCATGCTGGAACATCTCAAGAACACCCATCAGT...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATCGCTTGATGCCCTCGTaGTTAACTCTGACATGGCGC +
Preference number: 4 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHRLMPS*LTLTWR
Trigger: GCGCCATGTCAGAGTTAATCACGAGGGCATCAAGCG...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGCCATCAGTCCTTCCCTaGACCTGTCTAGCAGGCATA +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREPSVLP*TCLAGI
Trigger: TATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGG...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAAGAATAAAGGATTCCTaGGAGCCTGTCCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEERIKDS*EPVPSS
Trigger: AGAGGAGGGGACAGGCTCTCAGGAATCCTTTATTCT...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAATTCCGACCTGGCCCCTaGAGAAAAGTGGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEEFRPGP*RKVEET
Trigger: AGTTTCTTCCACTTTTCTTCAGGGGCCAGGTCGGAA...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000436614.1
CDS-3UTR GCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGCCCAGCAGAGGCTGCTaGTGTGTCTTCAGATTCACT +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREPSRGC*CVFRFT
Trigger: AGTGAATCTGAAGACACAGCAGCAGCCTCTGCTGGG...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCGAAGAAACAGGTGGCTaGATGCCTGGGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSEETGG*MPGPFS
Trigger: GGAGAATGGCCCAGGCATGCAGCCACCTGTTTCTTC...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAAGAAGAAACAGGTGGCTaGATGCCTGGGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKEETGG*MPGPFS
Trigger: GGAGAATGGCCCAGGCATGCAGCCACCTGTTTCTTC...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAAAGGCAGGGGAGTCATTaGTGTCCTCATCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKRQGSH*CPHLQP
Trigger: AGGCTGCAGATGAGGACAGCAATGACTCCCCTGCCT...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGAGGCAGGGGAGTCATTaGTGTCCTCATCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGRQGSH*CPHLQP
Trigger: AGGCTGCAGATGAGGACAGCAATGACTCCCCTGCCT...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp CAGGGCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGCCACAGGCAGCACAGTaGCTTTCAGCCTTGTACCAT +
Preference number: 4 (lower is better)
Translates to: QGTGFTHTPSLLVADETVPQAAQ*LSALYH
Trigger: ATGGTACAAGGCTGAAAGGCACTGTGCTGCCTGTGG...CACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACGCGAGCCACACTGGCTaGCATCAGCATGGCAGTACT +
Preference number: 4 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNASHTG*HQHGST
Trigger: AGTACTGCCATGCTGATGGCAGCCAGTGTGGCTCGC...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAACCAAATGTGAGCACTaGATGACGAGCCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RALMNAMPCVRKWVLRFRTKCEH*MTSPLS
Trigger: GGACAAGGGGCTCGTCATGCAGTGCTCACATTTGGT...TCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATGGCTTGCAGGAAGTTaGCCCCACACTCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKWLAGS*PHTQDR
Trigger: TCTGTCCTGAGTGTGGGGGCAACTTCCTGCAAGCCA...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTTGGAAAACCTCGCAGTaGGACGTCTGGATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: WRGVSIHDTPISPSLNLSWKTSQ*DVWMWD
Trigger: GTCCCACATCCAGACGTCGCACTGCGAGGTTTTCCA...AGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR GCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGTTCACTGACTTGCCATaGTCCTTCTTCATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWFTDLP*SFFMWA
Trigger: GGCCCACATGAAGAAGGAGCATGGCAAGTCAGTGAA...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGTGCGTTTTCCCTCTGTaGAATACCTGCAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: LQKQAGVSLHHRGQTLMECVFPL*NTCRGK
Trigger: TTTACCCCTGCAGGTATTGCACAGAGGGAAAACGCA...CTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp ATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGTGTCAGGCTCCTCACTaGAAGAGTCAGAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: MPCVRKWVLRFRGLSQLLCQAPH*KSQKTG
Trigger: GCCAGTCTTCTGACTCTTGCAGTGAGGAGCCTGACA...CAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GGGAGATGGGTGATGAGGTATGAACGGATGCCTCAGTGTCCAAGATACAAAAGGTGGCTGGCGGTGTCGTaGTGTCAGGCTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GRWVMRYERMPQCPRYKRWLAVS*CQAPHC
Trigger: GCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCA...CCTTTTGTATCTTGGACACTGAGGCATCCGTTCATACCTCATCACCCATCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR GCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACTGGCTGGCGGTGTCGTaGTGTCAGGCTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDWLAVS*CQAPHC
Trigger: GCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCA...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGAGAAGTGAAAGGCACTaGAGGGGTAGGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGRSERH*RGRGLE
Trigger: CTCAAGCCCCCTACCCCTGCAGTGCCTTTCACTTCT...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCATCTTCTGGCCCAGAATaGATGGCTTCATTCGCATCA +
Preference number: 4 (lower is better)
Translates to: PTPRLFLWLMKRCRLREPSSGPE*MASFAS
Trigger: TGATGCGAATGAAGCCATCCATTCTGGGCCAGAAGA...TGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGCCCCTCATTTTCTTCTaGCCCAGAATGGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWPLIFF*PRMDGF
Trigger: GAAGCCATCCATTCTGGGCCAGAAGAAAATGAGGGG...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AGGAGCGCTCACACAGGCGACAGGGGAACTTTTTCACTGACTTGCCATGCTCCTTGGGGAAGAAACAGGTaGCTGCATGCCTGGGCCATT +
Preference number: 4 (lower is better)
Translates to: RSAHTGDRGTFSLTCHAPWGRNR*LHAWAI
Trigger: AATGGCCCAGGCATGCAGCCACCTGTTTCTTCCCCA...AGGAGCATGGCAAGTCAGTGAAAAAGTTCCCCTGTCGCCTGTGTGAGCGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGTACGCTCACCACCTTTaGACCCTCAGAAGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWYAHHL*TLRSRC
Trigger: ACACCTACTTCTGAGGGTCCAAAGGTGGTGAGCGTA...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGATACGCTCACCACCTTTaGACCCTCAGAAGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: NSPAEGSGSSRENQAPRGYAHHL*TLRSRC
Trigger: ACACCTACTTCTGAGGGTCCAAAGGTGGTGAGCGTA...TCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATGGCTGCCATCAGCATaGCAGTACTGGCGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKWLPSA*QYWRSG
Trigger: TCCAGAACGCCAGTACTGCCATGCTGATGGCAGCCA...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATTCCACCAGGCTGGACTaGGTCCGTGATATCACTGTG +
Preference number: 4 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHSTRLD*VRDITV
Trigger: CACAGTGATATCACGGACCCAGTCCAGCCTGGTGGA...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCAGCCCAGCCTCAGCTaGTGGGCTCAGGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHQPSLS*WAQVWP
Trigger: AGGCCAAACCTGAGCCCACCAGCTGAGGCTGGGCTG...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATGGCTGCCCCACCATCTaGTCAAGGGCTACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHGCPTI*SRATGL
Trigger: GAGGCCTGTAGCCCTTGACCAGATGGTGGGGCAGCC...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATGATTGGGGAGCATCATaGGGCAGGTTGGGCACACAT +
Preference number: 4 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHDWGAS*GRLGTH
Trigger: ATGTGTGCCCAACCTGCCCCATGATGCTCCCCAATC...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTTTCTTATGCATGCGCTaGTGGGCGCTGAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WRGVSIHDTPISPSLNLSFLCMR*WALKLQ
Trigger: CTGCAGCTTCAGCGCCCACCAGCGCATGCATAAGAA...AGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGTTCTTATGCATGCGCTaGTGGGCGCTGAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGFLCMR*WALKLQ
Trigger: CTGCAGCTTCAGCGCCCACCAGCGCATGCATAAGAA...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCTCGCAGTGCGACGTCTaGATGTGGGACTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSSQCDV*MWDLME
Trigger: CTCCATCAAGTCCCACATCCAGACGTCGCACTGCGA...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCAGATGGGGCACTTGTaGAAAACCTCGCAGTGCGAC +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGQMGHL*KTSQCD
Trigger: GTCGCACTGCGAGGTTTTCCACAAGTGCCCCATCTG...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp AACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGACTGTGTCGCACATaGCGCACTTGTAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: NSPAEGSGSSRENQAPRGRLCRT*RTCRSA
Trigger: AGCTGATCTACAAGTGCGCCATGTGCGACACAGTCT...TCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTGGGGCAGCAAGTGCTaGTCGAAGTGTGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GSTLLGLQGQTQREVANNWGSKC*SKCEER
Trigger: CCTCTCCTCACACTTCGACCAGCACTTGCTGCCCCA...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACAAGACACTGACACGCTaGGGCAGCAAGTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNKTLTR*GSKCWS
Trigger: CGACCAGCACTTGCTGCCCCAGCGTGTCAGTGTCTT...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCGTCAGTCCCAGGCCTTaGAGACTAGTTGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPVSPRP*RLVVPN
Trigger: GTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGAC...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCGCAGATCCCAGACCTTaGTGGGCTCCAAAATCCAGA +
Preference number: 4 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGADPRP*WAPKSR
Trigger: TCTGGATTTTGGAGCCCACCAAGGTCTGGGATCTGC...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324048.9
CDS-3UTR CCA 90 bp CTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGCAAAGGTGCAATACCTGAAATaGGAGAGGACAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: LFLWLMKRCRLREPGEAKVQYLK*ERTGWQ
Trigger: CTGCCATCCTGTCCTCTCCCATTTCAGGTATTGCAC...CTTTGCCTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426871.1
3UTR CAA 72 bp AAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTaGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: KWVLRFRGLSQL*PQTLQVSGPPE
Trigger: TTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCATTCTGCATTCGATaGGGCCCCACAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTPFCIR*GPTGPS
Trigger: AGAAGGGCCTGTGGGGCCTCATCGAATGCAGAATGG...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGAGGTGGATCAGGATCTaGGGGGACCTGAGTTACAGT +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGRWIRI*GDLSYS
Trigger: ACTGTAACTCAGGTCCCCTCAGATCCTGATCCACCT...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp TTCAACTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGCAGGCAGCAGCGGTGTaGTGTCCGGCTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: FNSTLSKSQKKRGLNGDSQAAAV*CPAAPP
Trigger: TGGTGGGGCAGCCGGACATCACACCGCTGCTGCCTG...CGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAGTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR TCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATCTGGATGTGGGACTTaGTGGAGTTCACACCCCCAA +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKSGCGT*WSSHPQ
Trigger: TTGGGGGTGTGAACTCCATCAAGTCCCACATCCAGA...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCTCCAAGCGCCCAGACTaGTGGGTGTTCTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPSKRPD*WVFLRC
Trigger: ACATCTCAAGAACACCCATCAGTCTGGGCGCTTGGA...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATTCAGGGAACCAGGAGTaGCACAGGCCACAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHSGNQE*HRPQVQ
Trigger: CTGGACCTGTGGCCTGTGTCACTCCTGGTTCCCTGA...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACCGCTTGATGCCCTCGTaGTTAACTCTGACATGGCGC +
Preference number: 4 (lower is better)
Translates to: GSTLLGLQGQTQREVANNRLMPS*LTLTWR
Trigger: GCGCCATGTCAGAGTTAATCACGAGGGCATCAAGCG...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCAGGTTGAGGTTTCAATaGGCCAAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGRLRFQ*AKITPL
Trigger: CAGTGGCGTGATCTTGGCTCATTGAAACCTCAACCT...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324048.9
CDS-3UTR TCA 90 bp AGGAGCGCTCACACAGGCGACAGGGGAACTTTTTCACTGACTTGCCATGCTCCTTCCAAGCGCCCAGACTaGTGGGTGTTCTGTATCCTA +
Preference number: 4 (lower is better)
Translates to: RSAHTGDRGTFSLTCHAPSKRPD*WVFCIL
Trigger: TAGGATACAGAACACCCATCAGTCTGGGCGCTTGGA...AGGAGCATGGCAAGTCAGTGAAAAAGTTCCCCTGTCGCCTGTGTGAGCGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACATTGCTGTCCTCATCTaGAGCCTCGGCCCCACTAGA +
Preference number: 4 (lower is better)
Translates to: GSTLLGLQGQTQREVANNIAVLI*SLGPTR
Trigger: TCTAGTGGGGCCGAGGCTGCAGATGAGGACAGCAAT...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp GGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGCTCAGAAGTAGGTGTTaGAGGGGACAGCTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: GFTHTPSLLVADETVSAQLRSRC*RGQLQE
Trigger: CTCTTGAAGCTGTCCCCTGCAACACCTACTTCTGAG...CTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCACAGGCAGCACAGTaGCTTTCAGCCTTGTACCAT +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGPQAAQ*LSALYH
Trigger: ATGGTACAAGGCTGAAAGGCACTGTGCTGCCTGTGG...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACGGGGGTCGATTCTTATaGATGCGCTGGTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDGGRFL*MRWWAL
Trigger: CAGCGCCCACCAGCGCATGCATAAGAATCGACCCCC...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGTGCGTTTTCCCTCTGTaGAATACCTGCAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWCVFPL*NTCRGK
Trigger: TTTACCCCTGCAGGTATTGCACAGAGGGAAAACGCA...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGTGTCAGGCTCCTCACTaGAAGAGTCAGAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGCQAPH*KSQKTG
Trigger: GCCAGTCTTCTGACTCTTGCAGTGAGGAGCCTGACA...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGTCTTGGTCACTACCACCTCTTCCCTGAGAAGGGCGGGCCTTCCATGTTCTCTTGTCAGGCTCCTCACTaGAAGAGTCAGAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: CLGHYHLFPEKGGPSMFSCQAPH*KSQKTG
Trigger: GCCAGTCTTCTGACTCTTGCAGTGAGGAGCCTGACA...AGAGAACATGGAAGGCCCGCCCTTCTCAGGGAAGAGGTGGTAGTGACCAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR GCA 90 bp GGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCCAGAATAATCCTCAAATaGTCTTCTTCTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GQSQALETSCPQQPPAEPRIILK*SSSSGW
Trigger: CCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCT...GGGCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGCCACACTGGGGGTTCTaGAGCAGGAGCATAAAATTA +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWPHWGF*SRSIKL
Trigger: TAATTTTATGCTCCTGCTGCAGAACCCCCAGTGTGG...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCGAAAGTTCCAGTCCATaGCTGAAGGAATTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: CHRPYRSVGLQKQAGVSLESSSP*LKELWR
Trigger: TCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC...GAGACTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTAGAAGTGAAAGGCACTaGAGGGGTAGGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPRSERH*RGRGLE
Trigger: CTCAAGCCCCCTACCCCTGCAGTGCCTTTCACTTCT...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCCCCTCATTTTCTTCTaGCCCAGAATGGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: ALALPTPRLFLWLMKRCRPLIFF*PRMDGF
Trigger: GAAGCCATCCATTCTGGGCCAGAAGAAAATGAGGGG...CCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACGACTACAGAAATGTCTaGCGGTGGCAGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: GSTLLGLQGQTQREVANNDYRNV*RWQAMV
Trigger: GACCATGGCCTGCCACCGCCAGACATTTCTGTAGTC...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCAAGGCCCCCAATGGTaGGGAAGAAACAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTQGPQW*GRNRWL
Trigger: CAGCCACCTGTTTCTTCCCCACCATTGGGGGCCTTG...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTTCAAGGCCCCCAATaGTGGGGAAGAAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNLQGPQ*WGRNRW
Trigger: CCACCTGTTTCTTCCCCACCATTGGGGGCCTTGAAG...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTGGCTGCCATCAGCATaGCAGTACTGGCGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPWLPSA*QYWRSG
Trigger: TCCAGAACGCCAGTACTGCCATGCTGATGGCAGCCA...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CCTTCTTCATGTGGGCCACGTATTCATCACGCTCAGGGAACCAGGAGTGACACATGGCTGCCATCAGCATaGCAGTACTGGCGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PSSCGPRIHHAQGTRSDTWLPSA*QYWRSG
Trigger: TCCAGAACGCCAGTACTGCCATGCTGATGGCAGCCA...TGTGTCACTCCTGGTTCCCTGAGCGTGATGAATACGTGGCCCACATGAAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCCAGCAGGCGGCTCTGTaGAGAGCGGCAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCQQAAL*RAAGQG
Trigger: CCCCTGTCCTGCCGCTCTCCACAGAGCCGCCTGCTG...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCATCATGGGGCAGGTTaGGCACACATTGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTHHGAG*AHIAGG
Trigger: GCCACCAGCAATGTGTGCCCAACCTGCCCCATGATG...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTGATGGGTCTGAAAATTaGCTTGCAGGAAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: EEWRVHSTRTPGPNPKGGDGSEN*LAGSCP
Trigger: GGGGCAACTTCCTGCAAGCCAATTTTCAGACCCATC...ACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAACTTGTAGATCAGCTTaGCCTGCTGAGTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TPQPRDQAAVGKTRLQEETCRSA*PAEFGS
Trigger: GCTTCCAAACTCAGCAGGCCAAGCTGATCTACAAGT...TTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGTGCTCCTTCTTCATGTaGGCCACGTATTCATCACGC +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQRECSFFM*ATYSSR
Trigger: GCGTGATGAATACGTGGCCCACATGAAGAAGGAGCA...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCAAGAGTCAGAAGACTaGCGGCGTTTCCGACCTGGC +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTQESED*RRFRPG
Trigger: GCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTG...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCATCCAGGTCCGCCCCTaGGGGACTTGGCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCIQVRP*GTWLAV
Trigger: CACCGCCAGCCAAGTCCCCCAGGGGCGGACCTGGAT...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCGATCCCAGACCTTGGTaGGCTCCAAAATCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGDPRPW*APKSRE
Trigger: TTCTCTGGATTTTGGAGCCCACCAAGGTCTGGGATC...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324048.9
CDS-3UTR TCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCGCTAGGACCTGGGGATaGTGGGGGCTGCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCARTWG*WGLQLS
Trigger: GGAGAGCTGCAGCCCCCATCATCCCCAGGTCCTAGC...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp GGGAGATGGGTGATGAGGTATGAACGGATGCCTCAGTGTCCAAGATACAAAAGGTCTTCCTTCAAGGGCTaGCAGACGGGCACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GRWVMRYERMPQCPRYKRSSFKG*QTGTLG
Trigger: CCCCAAAGTGCCCGTCTGTCAGCCCTTGAAGGAAGA...CCTTTTGTATCTTGGACACTGAGGCATCCGTTCATACCTCATCACCCATCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR TCA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAAGAGTTACAGTCCTTGTaGTATTCCCGCAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: TRAGPGLEEESSSPCLKEELQSL*YSRRMF
Trigger: AAACATCCTGCGGGAATATCACAAGGACTGTAACTC...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTAGGTGGATCAGGATCTaGGGGGACCTGAGTTACAGT +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPRWIRI*GDLSYS
Trigger: ACTGTAACTCAGGTCCCCTCAGATCCTGATCCACCT...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp TTCAACTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGGCTGGACTGGGTCCGTaGTATCACTGTGCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: FNSTLSKSQKKRGLNGDSAGLGP*YHCAAP
Trigger: GGGGGCGGCACAGTGATATCACGGACCCAGTCCAGC...CGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAGTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR TCA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTCTGGATGTGGGACTTaGTGGAGTTCACACCCCCAA +
Preference number: 4 (lower is better)
Translates to: GSTLLGLQGQTQREVANNSGCGT*WSSHPQ
Trigger: TTGGGGGTGTGAACTCCATCAAGTCCCACATCCAGA...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGACTGATGGGTGTTCTTaGGATGTTCCAGCATGGTCC +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGTDGCS*DVPAWS
Trigger: GGACCATGCTGGAACATCTCAAGAACACCCATCAGT...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCCTCAACCCCATCATaGGGCTCTGTTCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHPSTPS*GSVLWS
Trigger: GCTCCACAGAACAGAGCCTCATGATGGGGTTGAGGG...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TGGACATGTTTCTCTAGGATCAGGCGGCTGCTGAAGGTGCGTTTTCCCTCTGTGCCATCAGTCCTTCCCTaGACCTGTCTAGCAGGCATA +
Preference number: 4 (lower is better)
Translates to: WTCFSRIRRLLKVRFPSVPSVLP*TCLAGI
Trigger: TATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGG...CACAGAGGGAAAACGCACCTTCAGCAGCCGCCTGATCCTAGAGAAACATGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACCCCAGCAGAGGCTGCTaGTGTGTCTTCAGATTCACT +
Preference number: 4 (lower is better)
Translates to: GSTLLGLQGQTQREVANNPSRGC*CVFRFT
Trigger: AGTGAATCTGAAGACACAGCAGCAGCCTCTGCTGGG...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCTTTTTCTTTCCAGGTaGCCCCACTGGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTLFLSR*PHWEEQ
Trigger: CTGCTCCTCCCAGTGGGGGCACCTGGAAAGAAAAAG...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAAGGTCCAAGGGAGTTTTaGCTTCCATGCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TRAGPGLEEESSSPCLKEGPREF*LPCLFL
Trigger: AAGAAAAAGGCATGGAAGGCAAAACTCCCTTGGACC...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAACTCAGAAGTAGGTGTTaGAGGGGACAGCTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKLRSRC*RGQLQE
Trigger: CTCTTGAAGCTGTCCCCTGCAACACCTACTTCTGAG...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp CCTTCTTCATGTGGGCCACGTATTCATCACGCTCAGGGAACCAGGAGTGACACAGCTGTCTTTGAAGGTTaGACCATCACCACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: PSSCGPRIHHAQGTRSDTAVFEG*TITTEA
Trigger: TGCCTCGGTGGTGATGGTGCAACCTTCAAAGACAGC...TGTGTCACTCCTGGTTCCCTGAGCGTGATGAATACGTGGCCCACATGAAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACTCCGTGATATCACTGTaGCGCCCCCTGTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDSVISL*RPLYLA
Trigger: GGCCAAGTACAGGGGGCGGCACAGTGATATCACGGA...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATTCCGTGATATCACTGTaGCGCCCCCTGTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHSVISL*RPLYLA
Trigger: GGCCAAGTACAGGGGGCGGCACAGTGATATCACGGA...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCTGGAAAACCTCGCAGTaGGACGTCTGGATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTWKTSQ*DVWMWD
Trigger: GTCCCACATCCAGACGTCGCACTGCGAGGTTTTCCA...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR GCA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGGAAAGTTCCAGTCCATaGCTGAAGGAATTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: AGPGLEEESSSPCLKELWESSSP*LKELWR
Trigger: TCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCTGGCCCAGAATGGATaGCTTCATTCGCATCAATGT +
Preference number: 4 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGLAQNG*LHSHQC
Trigger: ACATTGATGCGAATGAAGCCATCCATTCTGGGCCAG...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCGTTACCCCAGCAGCCTaGGCCCCGTCTCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCVTPAA*APSPAE
Trigger: CTCAGCAGGAGACGGGGCCCAGGCTGCTGGGGTAAC...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACAGAGTGGGGAGTTCCTaGGAGGGAAGGTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDRVGSS*EGRFRA
Trigger: AGCCCTGAACCTTCCCTCCCAGGAACTCCCCACTCT...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCGGAAGACTTGTCCACTaGCCCCTCATCATCATCTTC +
Preference number: 4 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSGRLVH*PLIIIF
Trigger: GAAGATGATGATGAGGGGCCAGTGGACAAGTCTTCC...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTGGAAGACTTGTCCACTaGCCCCTCATCATCATCTTC +
Preference number: 4 (lower is better)
Translates to: WRGVSIHDTPISPSLNLSGRLVH*PLIIIF
Trigger: GAAGATGATGATGAGGGGCCAGTGGACAAGTCTTCC...AGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAGCCTTAGGCAGGGCTTaGGGCACCAGGCCTAGCACG +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSREALGRA*GTRPST
Trigger: CGTGCTAGGCCTGGTGCCCCAAGCCCTGCCTAAGGC...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAGGCGGCGGGCGCAGTaGTTGCAGGTGACCTCGATG +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSRERRRAQ*LQVTSM
Trigger: CATCGAGGTCACCTGCAACCACTGCGCCCGCCGCCT...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCTTCTTATGCATGCGCTaGTGGGCGCTGAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTFLCMR*WALKLQ
Trigger: CTGCAGCTTCAGCGCCCACCAGCGCATGCATAAGAA...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTACACCACTGAACAGCTaGGGCACCTGTATCCTACAC +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPTPLNS*GTCILH
Trigger: GTGTAGGATACAGGTGCCCCAGCTGTTCAGTGGTGT...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCTGCGACGTCTGGATGTaGGACTTGATGGAGTTCACA +
Preference number: 4 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSCDVWM*DLMEFT
Trigger: TGTGAACTCCATCAAGTCCCACATCCAGACGTCGCA...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAATTCCGACCTGGCCCCTaGGCTCTGGCACTGGAACCC +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSREFRPGP*ALALEP
Trigger: GGGTTCCAGTGCCAGAGCCCAGGGGCCAGGTCGGAA...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTCTTCCCTGAGAAGGGCGGGCCTTCCATGTTCTCTCACCCGCTTCAACTCCACAAAGAGAGGCCTGAATaGAGATTCGACCACAAACAG +
Preference number: 4 (lower is better)
Translates to: LFPEKGGPSMFSHPLQLHKERPE*RFDHKQ
Trigger: CTGTTTGTGGTCGAATCTCCATTCAGGCCTCTCTTT...GTGGAGTTGAAGCGGGTGAGAGAACATGGAAGGCCCGCCCTTCTCAGGGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR TCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCTCATGACCAAATGTaGGCACTGCATGACGAGCCC +
Preference number: 4 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHPHDQM*ALHDEP
Trigger: GGGCTCGTCATGCAGTGCTCACATTTGGTCATGAGG...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCTCCAAGCGCCCAGACTaGTGGGTGTTCTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTSKRPD*WVFLRC
Trigger: ACATCTCAAGAACACCCATCAGTCTGGGCGCTTGGA...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCGTTCCAGTCCATGCCTaGAGGAATTGTGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTVPVHA*RNCGEV
Trigger: CACCTCTCCACAATTCCTTCAGGCATGGACTGGAAC...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTAGAATAAAGGATTCCTaGGAGCCTGTCCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CLKELWRGVSIHDTPISPRIKDS*EPVPSS
Trigger: AGAGGAGGGGACAGGCTCTCAGGAATCCTTTATTCT...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGCTTGGCCAACATGGTaGAACCTTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREAWPTW*NLVSTK
Trigger: TTTAGTAGAGACAAGGTTTCACCATGTTGGCCAAGC...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324048.9
CDS-3UTR GCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACAGGCAGGGGAGTCATTaGTGTCCTCATCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDRQGSH*CPHLQP
Trigger: AGGCTGCAGATGAGGACAGCAATGACTCCCCTGCCT...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACGTCCTTGTGTTCACGTaGATGCAGGAGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDVLVFT*MQEQAA
Trigger: TGCAGCCTGCTCCTGCATGCACGTGAACACAAGGAC...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGGACATGTTTCTCTAGGATCAGGCGGCTGCTGAAGGTGCGTTTTCCCTCTGTGTTCACTGACTTGCCATaGTCCTTCTTCATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: WTCFSRIRRLLKVRFPSVFTDLP*SFFMWA
Trigger: GGCCCACATGAAGAAGGAGCATGGCAAGTCAGTGAA...CACAGAGGGAAAACGCACCTTCAGCAGCCGCCTGATCCTAGAGAAACATGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR GCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATTGCGTTTTCCCTCTGTaGAATACCTGCAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHCVFPL*NTCRGK
Trigger: TTTACCCCTGCAGGTATTGCACAGAGGGAAAACGCA...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACATGAACGCCATGCCATaGGTGCGGAAGTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDMNAMP*VRKWVL
Trigger: CAAGACCCACTTCCGCACGCATGGCATGGCGTTCAT...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATTCTTCTGGCCCAGAATaGATGGCTTCATTCGCATCA +
Preference number: 4 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHSSGPE*MASFAS
Trigger: TGATGCGAATGAAGCCATCCATTCTGGGCCAGAAGA...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATCTTCTGGCCCAGAATaGATGGCTTCATTCGCATCA +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKSSGPE*MASFAS
Trigger: TGATGCGAATGAAGCCATCCATTCTGGGCCAGAAGA...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACTGGGGAAGAAACAGGTaGCTGCATGCCTGGGCCATT +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDWGRNR*LHAWAI
Trigger: AATGGCCCAGGCATGCAGCCACCTGTTTCTTCCCCA...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCATGTGTAAGCAGAGGTaGCCGGGGCAGCAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCMCKQR*PGQQAA
Trigger: AGCCGCCTGCTGCCCCGGCCACCTCTGCTTACACAT...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACGATTGGGGAGCATCATaGGGCAGGTTGGGCACACAT +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDDWGAS*GRLGTH
Trigger: ATGTGTGCCCAACCTGCCCCATGATGCTCCCCAATC...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACAGACTGTGTCGCACATaGCGCACTTGTAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: GSTLLGLQGQTQREVANNRLCRT*RTCRSA
Trigger: AGCTGATCTACAAGTGCGCCATGTGCGACACAGTCT...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACGTCAGTCCCAGGCCTTaGAGACTAGTTGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDVSPRP*RLVVPN
Trigger: GTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGAC...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCGGATCTGAGGGGACCTaGGTTACAGTCCTTGTGATA +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTGSEGT*VTVLVI
Trigger: TATCACAAGGACTGTAACTCAGGTCCCCTCAGATCC...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCCAGTAGCTGTCTTTaGAGGTTGCACCATCACCAC +
Preference number: 4 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHPSSCL*RLHHHH
Trigger: GTGGTGATGGTGCAACCTTCAAAGACAGCTACTGGG...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCAGGGAACCAGGAGTaGCACAGGCCACAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCSGNQE*HRPQVQ
Trigger: CTGGACCTGTGGCCTGTGTCACTCCTGGTTCCCTGA...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAGGATCAGGCGGCTGCTaGAGGTGCGTTTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSREGSGGC*RCVFPL
Trigger: CAGAGGGAAAACGCACCTTCAGCAGCCGCCTGATCC...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACGGTAATAGAGCTCAGTaGGCATTCTGGTGGAAACCA +
Preference number: 4 (lower is better)
Translates to: GSTLLGLQGQTQREVANNGNRAQ*AFWWKP
Trigger: TGGTTTCCACCAGAATGCTCACTGAGCTCTATTACC...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324048.9
CDS-3UTR GCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGTTGTTCCGCTCCTGGTaGGGGCCGAGACCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRLFRSW*GPRPGG
Trigger: ACCGCCGGGTCTCGGCCCGCACCAGGAGCGGAACAA...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAGCCAGGGCCTCAGACTaGTCGGGACACACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSREARASD*SGHTVF
Trigger: GAACACTGTGTGTCCCGAGCAGTCTGAGGCCCTGGC...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGGGTCCAAGGGAGTTTTaGCTTCCATGCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGGPREF*LPCLFL
Trigger: AAGAAAAAGGCATGGAAGGCAAAACTCCCTTGGACC...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAAGGTCCAAGGGAGTTTTaGCTTCCATGCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKGPREF*LPCLFL
Trigger: AAGAAAAAGGCATGGAAGGCAAAACTCCCTTGGACC...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCTCAGAAGTAGGTGTTaGAGGGGACAGCTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTLRSRC*RGQLQE
Trigger: CTCTTGAAGCTGTCCCCTGCAACACCTACTTCTGAG...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCCTCAGTAGCAGGGGCTaGCCCTCCCTGAGAAACAGC +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCLSSRG*PSLRNS
Trigger: GCTGTTTCTCAGGGAGGGGCAGCCCCTGCTACTGAG...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAAACTTTTTCACTGACTTaGCATGCTCCTTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: TRAGPGLEEESSSPCLKETFSLT*HAPSSC
Trigger: ACATGAAGAAGGAGCATGGCAAGTCAGTGAAAAAGT...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCCACACTGGGGGTTCTaGAGCAGGAGCATAAAATTA +
Preference number: 4 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNPHWGF*SRSIKL
Trigger: TAATTTTATGCTCCTGCTGCAGAACCCCCAGTGTGG...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TGTCTTGGTCACTACCACCTCTTCCCTGAGAAGGGCGGGCCTTCCATGTTCTCTAGTTTGCTTTTTCCCTaGCTGTCTTGGTCACTACCA +
Preference number: 4 (lower is better)
Translates to: CLGHYHLFPEKGGPSMFSSLLFP*LSWSLP
Trigger: TGGTAGTGACCAAGACAGGCAGGGAAAAAGCAAACT...AGAGAACATGGAAGGCCCGCCCTTCTCAGGGAAGAGGTGGTAGTGACCAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CCA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACCTGGCCCAGAATGGATaGCTTCATTCGCATCAATGT +
Preference number: 4 (lower is better)
Translates to: GSTLLGLQGQTQREVANNLAQNG*LHSHQC
Trigger: ACATTGATGCGAATGAAGCCATCCATTCTGGGCCAG...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAATCCTACACCTGGTTCTaGCTTCCCTGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSRESYTWF*LPWASR
Trigger: CCTGGAGGCCCAGGGAAGCCAGAACCAGGTGTAGGA...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp CTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGACCACTCCACCAGGCTGGACTaGGTCCGTGATATCACTGTG +
Preference number: 4 (lower is better)
Translates to: LHIVQVTEKERPEWRFDHSTRLD*VRDITV
Trigger: CACAGTGATATCACGGACCCAGTCCAGCCTGGTGGA...GTGGTCGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CCA 90 bp CTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGACCACGTCAGTCCCAGGCCTTaGAGACTAGTTGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LHIVQVTEKERPEWRFDHVSPRP*RLVVPN
Trigger: GTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGAC...GTGGTCGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR TCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAACCCTCAACCCCATCATaGGGCTCTGTTCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSREPSTPS*GSVLWS
Trigger: GCTCCACAGAACAGAGCCTCATGATGGGGTTGAGGG...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCGCGAGCCACACTGGCTaGCATCAGCATGGCAGTACT +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCASHTG*HQHGST
Trigger: AGTACTGCCATGCTGATGGCAGCCAGTGTGGCTCGC...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCCCAAGCTGCAAGCCGTaGCGGACCTGGACATGTTTC +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCPSCKP*RTWTCF
Trigger: GAAACATGTCCAGGTCCGGCACGGCTTGCAGCTTGG...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATGACTGGGCCCCAAGCTaGAAGCCGTGCCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNDWAPS*KPCRTW
Trigger: CCAGGTCCGGCACGGCTTGCAGCTTGGGGCCCAGTC...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCACACTGGGGGTTCTaGAGCAGGAGCATAAAATTA +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTPHWGF*SRSIKL
Trigger: TAATTTTATGCTCCTGCTGCAGAACCCCCAGTGTGG...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAACCACTAGAGGGACTCTaGGGACTTCCTGGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSREPLEGL*GLPGED
Trigger: GTCTTCCCCAGGAAGTCCCCAGAGTCCCTCTAGTGG...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACTACGCTCACCACCTTTaGACCCTCAGAAGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDYAHHL*TLRSRC
Trigger: ACACCTACTTCTGAGGGTCCAAAGGTGGTGAGCGTA...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGTTGGGCACACATTGCTaGTGGCCCCAGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRLGTHC*WPQGQG
Trigger: CCCCTGCCCCTGGGGCCACCAGCAATGTGTGCCCAA...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAATTATGCATGCGCTGGTaGGCGCTGAAGCTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSRELCMRW*ALKLQR
Trigger: TCGCTGCAGCTTCAGCGCCCACCAGCGCATGCATAA...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTTATGCATGCGCTGGTaGGCGCTGAAGCTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCLCMRW*ALKLQR
Trigger: TCGCTGCAGCTTCAGCGCCCACCAGCGCATGCATAA...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAAGACACTGACACGCTaGGGCAGCAAGTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSREKTLTR*GSKCWS
Trigger: CGACCAGCACTTGCTGCCCCAGCGTGTCAGTGTCTT...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACTGCTCCTTCTTCATGTaGGCCACGTATTCATCACGC +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDCSFFM*ATYSSR
Trigger: GCGTGATGAATACGTGGCCCACATGAAGAAGGAGCA...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATTGCTCCTTCTTCATGTaGGCCACGTATTCATCACGC +
Preference number: 4 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHCSFFM*ATYSSR
Trigger: GCGTGATGAATACGTGGCCCACATGAAGAAGGAGCA...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TTCAACTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGGACCTTACAGGTCAGTaGGCCTCCAGAAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FNSTLSKSQKKRGLNGDSDLTGQ*ASRSRQ
Trigger: CTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTC...CGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAGTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR TCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATGCTAGGACCTGGGGATaGTGGGGGCTGCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNARTWG*WGLQLS
Trigger: GGAGAGCTGCAGCCCCCATCATCCCCAGGTCCTAGC...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAACCTCATGACCAAATGTaGGCACTGCATGACGAGCCC +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSREPHDQM*ALHDEP
Trigger: GGGCTCGTCATGCAGTGCTCACATTTGGTCATGAGG...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCATCAGCTTGGCCTGCTaGGTTTGGAAGCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCISLAC*VWKLGC
Trigger: GCATCCCAGCTTCCAAACTCAGCAGGCCAAGCTGAT...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGCCCCACCCCCACCCTTaGGGCCTTTGCTCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRPHPHP*GLCSLV
Trigger: AACTAGGGAGCAAAGGCCTCAAGGGTGGGGGTGGGG...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCCTTTTTCTTTCCAGGTaGCCCCACTGGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCLFLSR*PHWEEQ
Trigger: CTGCTCCTCCCAGTGGGGGCACCTGGAAAGAAAAAG...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAGGTTGGGCACACATTaGTGGTGGCCCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRRLGTH*WWPQGQ
Trigger: CTGCCCCTGGGGCCACCAGCAATGTGTGCCCAACCT...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAATGGCTTGCAGGAAGTTaGCCCCACACTCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSREWLAGS*PHTQDR
Trigger: TCTGTCCTGAGTGTGGGGGCAACTTCCTGCAAGCCA...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCAGAATAATCCTCAAATaGTCTTCTTCTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGRIILK*SSSSGW
Trigger: CCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCT...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp ATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGAGAATAATCCTCAAATaGTCTTCTTCTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: MPCVRKWVLRFRGLSQLLRIILK*SSSSGW
Trigger: CCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCT...CAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAATTCACTTCCTACACCTaGTTCTGGCTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSREFTSYT*FWLPWA
Trigger: GGCCCAGGGAAGCCAGAACCAGGTGTAGGAAGTGAA...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTAACAAAAGAGCCCCCTCCCGAGTaGGAGAGGGTGCAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: NNPQMLFFFRLERQELTKEPPPE*ERVQRE
Trigger: CTCCCTCTGCACCCTCTCCCACTCGGGAGGGGGCTC...TTTTGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCAGCATGGCAGTACTaGCGTTCTGGATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCSAWQY*RSGWWP
Trigger: TGGCCACCATCCAGAACGCCAGTACTGCCATGCTGA...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACTTGGGCACACATTGCTaGTGGCCCCAGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LQITRIILKCSSSSGWRDLGTHC*WPQGQG
Trigger: CCCCTGCCCCTGGGGCCACCAGCAATGTGTGCCCAA...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGACCACTGCGACGTCTGGATGTaGGACTTGATGGAGTTCACA +
Preference number: 4 (lower is better)
Translates to: LHIVQVTEKERPEWRFDHCDVWM*DLMEFT
Trigger: TGTGAACTCCATCAAGTCCCACATCCAGACGTCGCA...GTGGTCGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACTTGTAGATCAGCTTaGCCTGCTGAGTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDTCRSA*PAEFGS
Trigger: GCTTCCAAACTCAGCAGGCCAAGCTGATCTACAAGT...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp AAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTCCTCAGGCTCAGTCTTaGGGGTCAGCAGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: KPKGRLQITRIILKCSSSPQAQS*GSAGHP
Trigger: GGGGTGCCCTGCTGACCCCCAAGACTGAGCCTGAGG...AGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTAACAAAAAGGTTGTTCCGCTCCTaGTGCGGGCCGAGACCCGGC +
Preference number: 4 (lower is better)
Translates to: NNPQMLFFFRLERQELTKRLFRS*CGPRPG
Trigger: GCCGGGTCTCGGCCCGCACCAGGAGCGGAACAACCT...TTTTGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324048.9
CDS-3UTR TCA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATGAGTTACAGTCCTTGTaGTATTCCCGCAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHELQSL*YSRRMF
Trigger: AAACATCCTGCGGGAATATCACAAGGACTGTAACTC...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGTCAGGGAACCAGGAGTaGCACAGGCCACAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRSGNQE*HRPQVQ
Trigger: CTGGACCTGTGGCCTGTGTCACTCCTGGTTCCCTGA...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGATCGGGGTCAGACCTTaGTGGAGGGGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRIGVRP*WRGLFL
Trigger: GAGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGAT...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGCTACCACCTCTTCCCTaGGAAGGGCGGGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRLPPLP*EGRAFH
Trigger: ATGGAAGGCCCGCCCTTCTCAGGGAAGAGGTGGTAG...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR GCA 90 bp TTCAACTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGGCTGTCTTTGAAGGTTaGACCATCACCACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: FNSTLSKSQKKRGLNGDSAVFEG*TITTEA
Trigger: TGCCTCGGTGGTGATGGTGCAACCTTCAAAGACAGC...CGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR GCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGCTCAGTAGCAGGGGCTaGCCCTCCCTGAGAAACAGC +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRLSSRG*PSLRNS
Trigger: GCTGTTTCTCAGGGAGGGGCAGCCCCTGCTACTGAG...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACACTTTTTCACTGACTTaGCATGCTCCTTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNTFSLT*HAPSSC
Trigger: ACATGAAGAAGGAGCATGGCAAGTCAGTGAAAAAGT...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACCACTACATAGAAGTTTaGTTTTTCCCTGCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GSTLLGLQGQTQREVANNHYIEV*FFPACL
Trigger: AAGACAGGCAGGGAAAAAGCAAACTTCTATGTAGTG...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGTCCTACACCTGGTTCTaGCTTCCCTGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRSYTWF*LPWASR
Trigger: CCTGGAGGCCCAGGGAAGCCAGAACCAGGTGTAGGA...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAACACCACTGAACAGCTaGGGCACCTGTATCCTACAC +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSRETPLNS*GTCILH
Trigger: GTGTAGGATACAGGTGCCCCAGCTGTTCAGTGGTGT...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAAGCCGTGCCGGACCTaGACATGTTTCTCTAGGATC +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSREKPCRT*TCFSRI
Trigger: GATCCTAGAGAAACATGTCCAGGTCCGGCACGGCTT...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CCA 90 bp TTCAACTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGTTTCCCTGCCTGTCTTaGTCACTACCACCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: FNSTLSKSQKKRGLNGDSFPCLS*SLPPLP
Trigger: GGGAAGAGGTGGTAGTGACCAAGACAGGCAGGGAAA...CGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR TCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGCCATTCTGCATTCGATaGGGCCCCACAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRPFCIR*GPTGPS
Trigger: AGAAGGGCCTGTGGGGCCTCATCGAATGCAGAATGG...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATGGATCAGGCGGCTGCTaGAGGTGCGTTTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNGSGGC*RCVFPL
Trigger: CAGAGGGAAAACGCACCTTCAGCAGCCGCCTGATCC...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTATCGGGGTCAGACCTTaGTGGAGGGGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KPKGRLQITRIILKCSSSIGVRP*WRGLFL
Trigger: GAGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGAT...AGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTAACAAAAAGAAGCAGGCAGGGGTaGGTCTCCACCATCGGGGTC +
Preference number: 4 (lower is better)
Translates to: NNPQMLFFFRLERQELTKRSRQG*VSTIGV
Trigger: GACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCT...TTTTGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGGCAAGAGGGCTCTGGTaGCCTGGAGACTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRARGLW*PGDCLK
Trigger: CTTCAAGCAGTCTCCAGGGCACCAGAGCCCTCTTGC...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGTCCGTGATATCACTGTaGCGCCCCCTGTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRSVISL*RPLYLA
Trigger: GGCCAAGTACAGGGGGCGGCACAGTGATATCACGGA...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTGGTGTGATGTCCGGCTaGCCCACCATCTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: KPKGRLQITRIILKCSSSGVMSG*PTIWSR
Trigger: CCTTGACCAGATGGTGGGGCAGCCGGACATCACACC...AGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACCGCTGGGGCAGCAAGTaGTGGTCGAAGTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LQITRIILKCSSSSGWRDRWGSK*WSKCEE
Trigger: CTCCTCACACTTCGACCAGCACTTGCTGCCCCAGCG...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR GCA 90 bp AATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTAACAAAAGTTCTGTGGAGCTGCTaGTCCGGTAGCGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: NNPQMLFFFRLERQELTKVLWSC*SGSAEG
Trigger: GCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAAC...TTTTGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGCAAGGCCCCCAATGGTaGGGAAGAAACAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRQGPQW*GRNRWL
Trigger: CAGCCACCTGTTTCTTCCCCACCATTGGGGGCCTTG...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAGATGGGTCTGAAAATTaGCTTGCAGGAAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: NINVNENSPAEGSGSSREDGSEN*LAGSCP
Trigger: GGGGCAACTTCCTGCAAGCCAATTTTCAGACCCATC...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAAGACACTGACACGCTaGGGCAGCAAGTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRKTLTR*GSKCWS
Trigger: CGACCAGCACTTGCTGCCCCAGCGTGTCAGTGTCTT...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACGTGCTGGTCGAAGTGTaGGGAGAGGAGGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LQITRIILKCSSSSGWRDVLVEV*GEEGFV
Trigger: CACAAACCCCTCCTCTCCTCACACTTCGACCAGCAC...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp AATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTAACAAAAGGATCAGGCGGCTGCTaGAGGTGCGTTTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: NNPQMLFFFRLERQELTKGSGGC*RCVFPL
Trigger: CAGAGGGAAAACGCACCTTCAGCAGCCGCCTGATCC...TTTTGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACTTTTTCACTGACTTaGCATGCTCCTTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDTFSLT*HAPSSC
Trigger: ACATGAAGAAGGAGCATGGCAAGTCAGTGAAAAAGT...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGATGAACGCCATGCCATaGGTGCGGAAGTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRMNAMP*VRKWVL
Trigger: CAAGACCCACTTCCGCACGCATGGCATGGCGTTCAT...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCAGAATAATCCTCAAATaGTCTTCTTCTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTRIILK*SSSSGW
Trigger: CCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCT...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCCCACACTGGGGGTTCTaGAGCAGGAGCATAAAATTA +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCPHWGF*SRSIKL
Trigger: TAATTTTATGCTCCTGCTGCAGAACCCCCAGTGTGG...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATAGAAATGTCTGGCGGTaGCAGGCCATGGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNRNVWR*QAMVRG
Trigger: GCCTCTGACCATGGCCTGCCACCGCCAGACATTTCT...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGGACTACAGAAATGTCTaGCGGTGGCAGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRDYRNV*RWQAMV
Trigger: GACCATGGCCTGCCACCGCCAGACATTTCTGTAGTC...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACCCACTAGAGGGACTCTaGGGACTTCCTGGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: LQITRIILKCSSSSGWRDPLEGL*GLPGED
Trigger: GTCTTCCCCAGGAAGTCCCCAGAGTCCCTCTAGTGG...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACTGGTGGGCTCAGGTTTaGCCTATAGGCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LQITRIILKCSSSSGWRDWWAQV*PIGREQ
Trigger: CTGCTCCCTGCCTATAGGCCAAACCTGAGCCCACCA...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATCATCATGGGGCAGGTTaGGCACACATTGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNHHGAG*AHIAGG
Trigger: GCCACCAGCAATGTGTGCCCAACCTGCCCCATGATG...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGCAGATGGGGCACTTGTaGAAAACCTCGCAGTGCGAC +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRQMGHL*KTSQCD
Trigger: GTCGCACTGCGAGGTTTTCCACAAGTGCCCCATCTG...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATGTGGGCATGGGCACTTaGCCCAGACTTGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNVGMGT*PRLEGH
Trigger: ATGGCCTTCAAGTCTGGGCCAAGTGCCCATGCCCAC...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp TTCAACTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGACTTGTAGATCAGCTTaGCCTGCTGAGTTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FNSTLSKSQKKRGLNGDSTCRSA*PAEFGS
Trigger: GCTTCCAAACTCAGCAGGCCAAGCTGATCTACAAGT...CGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAGTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CCA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACGACCTTACAGGTCAGTaGGCCTCCAGAAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQITRIILKCSSSSGWRDDLTGQ*ASRSRQ
Trigger: CTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTC...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTGAGAGGAGGGGTTTGTaGGTGAAGACTGTGTCGCAC +
Preference number: 4 (lower is better)
Translates to: KPKGRLQITRIILKCSSSERRGL*VKTVSH
Trigger: GTGCGACACAGTCTTCACTCACAAACCCCTCCTCTC...AGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGCCATCAGTCCTTCCCTaGACCTGTCTAGCAGGCATA +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRPSVLP*TCLAGI
Trigger: TATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGG...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTGGCTTGCAGGAAGTTaGCCCCACACTCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: KPKGRLQITRIILKCSSSWLAGS*PHTQDR
Trigger: TCTGTCCTGAGTGTGGGGGCAACTTCCTGCAAGCCA...AGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp CTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGACCACACTTTTTCACTGACTTaGCATGCTCCTTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: LHIVQVTEKERPEWRFDHTFSLT*HAPSSC
Trigger: ACATGAAGAAGGAGCATGGCAAGTCAGTGAAAAAGT...GTGGTCGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR GCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCGAAAGTTCCAGTCCATaGCTGAAGGAATTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCESSSP*LKELWR
Trigger: TCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTAGAAGTGAAAGGCACTaGAGGGGTAGGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: KPKGRLQITRIILKCSSSRSERH*RGRGLE
Trigger: CTCAAGCCCCCTACCCCTGCAGTGCCTTTCACTTCT...AGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTTCACTTCCTACACCTaGTTCTGGCTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNFTSYT*FWLPWA
Trigger: GGCCCAGGGAAGCCAGAACCAGGTGTAGGAAGTGAA...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACTGGGGAAGAAACAGGTaGCTGCATGCCTGGGCCATT +
Preference number: 4 (lower is better)
Translates to: LQITRIILKCSSSSGWRDWGRNR*LHAWAI
Trigger: AATGGCCCAGGCATGCAGCCACCTGTTTCTTCCCCA...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTCAGCATGGCAGTACTaGCGTTCTGGATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNSAWQY*RSGWWP
Trigger: TGGCCACCATCCAGAACGCCAGTACTGCCATGCTGA...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTAACAAAATTATGCATGCGCTGGTaGGCGCTGAAGCTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: NNPQMLFFFRLERQELTKLCMRW*ALKLQR
Trigger: TCGCTGCAGCTTCAGCGCCCACCAGCGCATGCATAA...TTTTGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCGCAGTGCGACGTCTaGATGTGGGACTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: KPKGRLQITRIILKCSSSSQCDV*MWDLME
Trigger: CTCCATCAAGTCCCACATCCAGACGTCGCACTGCGA...AGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR TCA 90 bp AATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTAACAAAACAGGCTCTTCTCCAATaGGAAGGCATCCCCACACTC +
Preference number: 4 (lower is better)
Translates to: NNPQMLFFFRLERQELTKQALLQ*EGIPTL
Trigger: GAGTGTGGGGATGCCTTCTCATTGGAGAAGAGCCTG...TTTTGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAGAATAAAGGATTCCTaGGAGCCTGTCCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QITRIILKCSSSSGWRDRRIKDS*EPVPSS
Trigger: AGAGGAGGGGACAGGCTCTCAGGAATCCTTTATTCT...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp AATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTAACAAAAAGGTGGAGTTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: NNPQMLFFFRLERQELTKRWSLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCTCACTGCAAACTCCACCT...TTTTGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324048.9
CDS-3UTR GCA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACCCACAGGCAGCACAGTaGCTTTCAGCCTTGTACCAT +
Preference number: 4 (lower is better)
Translates to: LQITRIILKCSSSSGWRDPQAAQ*LSALYH
Trigger: ATGGTACAAGGCTGAAAGGCACTGTGCTGCCTGTGG...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR GCA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACGCTGTCTTTGAAGGTTaGACCATCACCACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: LQITRIILKCSSSSGWRDAVFEG*TITTEA
Trigger: TGCCTCGGTGGTGATGGTGCAACCTTCAAAGACAGC...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR GCA 90 bp AATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTAACAAAAATGAACGCCATGCCATaGGTGCGGAAGTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: NNPQMLFFFRLERQELTKMNAMP*VRKWVL
Trigger: CAAGACCCACTTCCGCACGCATGGCATGGCGTTCAT...TTTTGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTACACCACTGAACAGCTaGGGCACCTGTATCCTACAC +
Preference number: 4 (lower is better)
Translates to: KPKGRLQITRIILKCSSSTPLNS*GTCILH
Trigger: GTGTAGGATACAGGTGCCCCAGCTGTTCAGTGGTGT...AGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CCA 90 bp AATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTAACAAAACCATGCGTGCGGAAGTaGGTCTTGAGGTTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: NNPQMLFFFRLERQELTKPCVRK*VLRFRG
Trigger: CCCTCTAAACCTCAAGACCCACTTCCGCACGCATGG...TTTTGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR TCA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACGGATCTGAGGGGACCTaGGTTACAGTCCTTGTGATA +
Preference number: 4 (lower is better)
Translates to: LQITRIILKCSSSSGWRDGSEGT*VTVLVI
Trigger: TATCACAAGGACTGTAACTCAGGTCCCCTCAGATCC...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR TCA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGAATAAAGGATTCCTaGGAGCCTGTCCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LQITRIILKCSSSSGWRDRIKDS*EPVPSS
Trigger: AGAGGAGGGGACAGGCTCTCAGGAATCCTTTATTCT...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CCA 90 bp AAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTCCCCTCATTTTCTTCTaGCCCAGAATGGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: KPKGRLQITRIILKCSSSPLIFF*PRMDGF
Trigger: GAAGCCATCCATTCTGGGCCAGAAGAAAATGAGGGG...AGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATCTGGCCCAGAATGGATaGCTTCATTCGCATCAATGT +
Preference number: 4 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNLAQNG*LHSHQC
Trigger: ACATTGATGCGAATGAAGCCATCCATTCTGGGCCAG...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CCA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTCTTCACGGATCTTCTaGGGTCCACACAGATCTGAA +
Preference number: 4 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNSSRIF*GPHRSE
Trigger: TTCAGATCTGTGTGGACCCCAGAAGATCCGTGAAGA...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324048.9
CDS-3UTR CCA 90 bp TCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCATTCATGTCCGCATaGAATCAATTCATATTCTTC +
Preference number: 4 (lower is better)
Translates to: SRAKPKGRLQITRIILKCSFMSA*NQFIFF
Trigger: GAAGAATATGAATTGATTCCATGCGGACATGAATGA...GCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324048.9
CDS GCA 90 bp CTGGTGCGGGCCGAGACCCGGCGGTCTCTACCCCGCTCCAGCCGCTaGAGCCACCGCCGCCCTCCCCGCGGCCGCCGCTACTTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LVRAETRRSLPRSSR*SHRRPPRGRRYFLL
Trigger: AAGCAGGAAGTAGCGGCGGCCGCGGGGAGGGCGGCGGTGGCTGCAGCGGCTGGAGCGGGGTAGAGACCGCCGGGTCTCGGCCCGCACCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CAA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGCCGCCCCTGGGGGACTaGGCTGGCGGTGTCGTGCTG +
Preference number: 5 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWPPLGD*AGGVVL
Trigger: CAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCGG...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS GCA 90 bp CCAGCCTGCTTCCCAGCTTGCCTACTGGAAGGGGGAGCACCCAGGTaGGTCTCCGCCCCTCGCTCCCTACTGGCCGCTCGAAGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PACFPACLLEGGAPR*VSAPRSLLAARSLK
Trigger: CTTCAAGCTTCGAGCGGCCAGTAGGGAGCGAGGGGCGGAGACGCACCTGGGTGCTCCCCCTTCCAGTAGGCAAGCTGGGAAGCAGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS-3UTR CAA 90 bp CTGCAAGAGTCAGAAGACTGGCGGCGTTTCCGACCTGGCCCCTGGGCTCTGGCAATGGCCCCCTCACCCTaGCCCAAGGCAGGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: LQESEDWRRFRPGPWALAMAPSP*PKAGKA
Trigger: GGCCTTGCCTGCCTTGGGCAAGGGTGAGGGGGCCAT...TGCCAGAGCCCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CAA 90 bp CCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATCCGCCCCTGGGGGACTaGGCTGGCGGTGTCGTGCTG +
Preference number: 5 (lower is better)
Translates to: PWRLVVPNSPLPSPDERHPPLGD*AGGVVL
Trigger: CAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCGG...ATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS GCA 90 bp CCTCCGCCACTGTCGCTTAGAAAGAAGCCAGCCTGCTTCCCAGCTTaGCTACTGGAAGGGGGAGCACCCAGGTGCGTCTCCGCCCCTCGC +
Preference number: 5 (lower is better)
Translates to: PPPLSLRKKPACFPA*LLEGGAPRCVSAPR
Trigger: GCGAGGGGCGGAGACGCACCTGGGTGCTCCCCCTTCCAGTAGGCAAGCTGGGAAGCAGGCTGGCTTCTTTCTAAGCGACAGTGGCGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS CCA 90 bp CCCCCAGTCCCCAGCCCTGCCCGCCCGTCAGCCTTAGGCAGGGCTTaGGGCACCAGGCCTAGCACGTTCTTAGCAATCATCTTAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PPVPSPARPSALGRA*GTRPSTFLAIILGL
Trigger: CAGCCCTAAGATGATTGCTAAGAACGTGCTAGGCCTGGTGCCCCAAGCCCTGCCTAAGGCTGACGGGCGGGCAGGGCTGGGGACTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTCGGCAGATCCCAGACTaGTTCCGCTCCTGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: SPLPSPDERHAMRAEVGLRQIPD*FRSWCG
Trigger: CCCGCACCAGGAGCGGAACAAGTCTGGGATCTGCCG...AAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CAA 90 bp AGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGCAGGGGTAGGGGGCTaGAGTGCCAGTGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: SPLPSPDERHAMRAEVGLAGVGG*SASELG
Trigger: CCCCAACTCACTGGCACTCAAGCCCCCTACCCCTGC...AAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS GCA 90 bp CCCTGGGGGACTTGGCTGGCGGTGTCGTGCTGTCAGGCTCCTCACTaGAAGAGTCAGAAGACTGGCGGCGTTTCCGACCTGGCCCCTGAA +
Preference number: 5 (lower is better)
Translates to: PWGTWLAVSCCQAPH*KSQKTGGVSDLAPE
Trigger: TTCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAGTGAGGAGCCTGACAGCACGACACCGCCAGCCAAGTCCCCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436614.1
CDS GCA 90 bp CGGCAGATCCCAGACCTCTCCCCATTGGCTGCGCCGGGGTCCGTCTaGCCCATCTACGAGTCTCGTAAACGATTGGCCTCCGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: RQIPDLSPLAAPGSV*PIYESRKRLASATV
Trigger: GACAGTGGCGGAGGCCAATCGTTTACGAGACTCGTAGATGGGGCAGACGGACCCCGGCGCAGCCAATGGGGAGAGGTCTGGGATCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS CCA 90 bp ACTGTTCCTTGCACTCCAGGCAGCGAAAGCATGTGTAAGCAGAGGTaGCCGGGGCAGCAGGCGGCTCTGTGGAGAGCGGCAGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: TVPCTPGSESMCKQR*PGQQAALWRAAGQG
Trigger: CCCCTGTCCTGCCGCTCTCCACAGAGCCGCCTGCTGCCCCGGCCACCTCTGCTTACACATGCTTTCGCTGCCTGGAGTGCAAGGAACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
ENST00000459919.1
CDS-3UTR CAA 90 bp CTCTTGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGGGCAGCACCACAGCCTaGCGAGCCACACTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LLPQTLQVSGPPEAGRGEGSTTA*RATLAA
Trigger: GGCAGCCAGTGTGGCTCGCAAGGCTGTGGTGCTGCC...CTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGCAGGTTGGGCACACATaGCTGGTGGCCCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGQVGHT*LVAPGA
Trigger: TGCCCCTGGGGCCACCAGCAATGTGTGCCCAACCTG...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGCCGCCCCTGGGGGACTaGGCTGGCGGTGTCGTGCTG +
Preference number: 5 (lower is better)
Translates to: RRNGGSTLLGLQGQTQREPPLGD*AGGVVL
Trigger: CAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCGG...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGCCGCCCCTGGGGGACTaGGCTGGCGGTGTCGTGCTG +
Preference number: 5 (lower is better)
Translates to: LMNAMPCVRKWVLRFRGLPPLGD*AGGVVL
Trigger: CAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCGG...CAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS TCA 90 bp CCAGAGGTCCAGAGACAGGTGGGACAGCTACAGGCAGCAGCGGTGTaGTGTCCGGCTGCCCCACCATCTGGTCAAGGGCTACAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: PEVQRQVGQLQAAAV*CPAAPPSGQGLQAS
Trigger: TGAGGCCTGTAGCCCTTGACCAGATGGTGGGGCAGCCGGACATCACACCGCTGCTGCCTGTAGCTGTCCCACCTGTCTCTGGACCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS CCA 90 bp GGGATGATGGGGGCTGCAGCTCTCCTGCTTCAAGGCCCCCAATGGTaGGGAAGAAACAGGTGGCTGCATGCCTGGGCCATTCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GMMGAAALLLQGPQW*GRNRWLHAWAILLG
Trigger: GCCCAGGAGAATGGCCCAGGCATGCAGCCACCTGTTTCTTCCCCACCATTGGGGGCCTTGAAGCAGGAGAGCTGCAGCCCCCATCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS CCA 90 bp CAGGCAGCACCACAGCCTTGCGAGCCACACTGGCTGCCATCAGCATaGCAGTACTGGCGTTCTGGATGGTGGCCACAGGCAGCACAGTGC +
Preference number: 5 (lower is better)
Translates to: QAAPQPCEPHWLPSA*QYWRSGWWPQAAQC
Trigger: GCACTGTGCTGCCTGTGGCCACCATCCAGAACGCCAGTACTGCCATGCTGATGGCAGCCAGTGTGGCTCGCAAGGCTGTGGTGCTGCCTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS CCA 90 bp CACTGTCGCTTAGAAAGAAGCCAGCCTGCTTCCCAGCTTGCCTACTaGAAGGGGGAGCACCCAGGTGCGTCTCCGCCCCTCGCTCCCTAC +
Preference number: 5 (lower is better)
Translates to: HCRLERSQPASQLAY*KGEHPGASPPLAPY
Trigger: GTAGGGAGCGAGGGGCGGAGACGCACCTGGGTGCTCCCCCTTCCAGTAGGCAAGCTGGGAAGCAGGCTGGCTTCTTTCTAAGCGACAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS-3UTR CAA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAAGGCAGCACCACAGCCTaGCGAGCCACACTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: TRAGPGLEEESSSPCLKEGSTTA*RATLAA
Trigger: GGCAGCCAGTGTGGCTCGCAAGGCTGTGGTGCTGCC...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGGGCAGCACCACAGCCTaGCGAGCCACACTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: AGPGLEEESSSPCLKELWGSTTA*RATLAA
Trigger: GGCAGCCAGTGTGGCTCGCAAGGCTGTGGTGCTGCC...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS GCA 90 bp GCTGGAAGTGAGCTGCCATGCCAGCCTTGTCCCGGCACTGTTCCTTaGACTCCAGGCAGCGAAAGCATGTGTAAGCAGAGGTGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: AGSELPCQPCPGTVP*TPGSESMCKQRWPG
Trigger: CCCCGGCCACCTCTGCTTACACATGCTTTCGCTGCCTGGAGTGCAAGGAACAGTGCCGGGACAAGGCTGGCATGGCAGCTCACTTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
ENST00000459919.1
CDS CCA 90 bp CCACAGCCTTGCGAGCCACACTGGCTGCCATCAGCATGGCAGTACTaGCGTTCTGGATGGTGGCCACAGGCAGCACAGTGCCTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: PQPCEPHWLPSAWQY*RSGWWPQAAQCLSA
Trigger: GGCTGAAAGGCACTGTGCTGCCTGTGGCCACCATCCAGAACGCCAGTACTGCCATGCTGATGGCAGCCAGTGTGGCTCGCAAGGCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAACGGCAGATCCCAGACTaGTTCCGCTCCTGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: TRAGPGLEEESSSPCLKERQIPD*FRSWCG
Trigger: CCCGCACCAGGAGCGGAACAAGTCTGGGATCTGCCG...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp GCTCTGTTCTGTGGAGCTGCTGCTCCGGTAGCGCAGAGGGCCATGGCCTCCAGAACGAGCCCCTTGTCCTaGTGTTCACGTGCATGCAGG +
Preference number: 5 (lower is better)
Translates to: ALFCGAAAPVAQRAMASRTSPLS*CSRACR
Trigger: CCTGCATGCACGTGAACACAAGGACAAGGGGCTCGT...TCTGGAGGCCATGGCCCTCTGCGCTACCGGAGCAGCAGCTCCACAGAACAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGTCCCGGCACTGTTCCTaGCACTCCAGGCAGCGAAAG +
Preference number: 5 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWSRHCS*HSRQRK
Trigger: CTTTCGCTGCCTGGAGTGCAAGGAACAGTGCCGGGA...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGTTGGCTTGCAGGAAGTaGCCCCCACACTCAGGACAG +
Preference number: 5 (lower is better)
Translates to: PLPSPDERHAMRAEVGLELACRK*PPHSGQ
Trigger: CTGTCCTGAGTGTGGGGGCAACTTCCTGCAAGCCAA...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTCCGCCCCTGGGGGACTaGGCTGGCGGTGTCGTGCTG +
Preference number: 5 (lower is better)
Translates to: CLKELWRGVSIHDTPISPPPLGD*AGGVVL
Trigger: CAGCACGACACCGCCAGCCAAGTCCCCCAGGGGCGG...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGCATCGGGGTCAGACCTaGATGGAGGGGCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: PRLFLWLMKRCRLREPGEHRGQT*MEGPLP
Trigger: AGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGATG...CTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGGGCTGTCGCAGCTCTaGCCACAGACCTTACAGGTC +
Preference number: 5 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGGLSQL*PQTLQV
Trigger: GACCTGTAAGGTCTGTGGCAAGAGCTGCGACAGCCC...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AAGCACAAGCCACAGTCGAGGCACTGCTGGGCACCATCCTCCACCCTCAACCCCGGGCTGTCGCAGCTCTaGCCACAGACCTTACAGGTC +
Preference number: 5 (lower is better)
Translates to: KHKPQSRHCWAPSSTLNPGLSQL*PQTLQV
Trigger: GACCTGTAAGGTCTGTGGCAAGAGCTGCGACAGCCC...GGGGTTGAGGGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGGCTTGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTGCGGAAGTGGGTCTaGAGGTTTAGAGGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: PLPSPDERHAMRAEVGLEVRKWV*RFRGLS
Trigger: CGACAGCCCTCTAAACCTCAAGACCCACTTCCGCAC...CTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGTTGAGTGCCAGTGAGTaGGGGTTGGGCGGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: GFTHTPSLLVADETVSAQLSASE*GLGGGG
Trigger: CCCGCCCCCGCCCAACCCCAACTCACTGGCACTCAA...CTGAGCCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp ACTAGGGCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAAGCAGGGGTAGGGGGCTaGAGTGCCAGTGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: TRAGPGLEEESSSPCLKEAGVGG*SASELG
Trigger: CCCCAACTCACTGGCACTCAAGCCCCCTACCCCTGC...TTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGCCCTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS GCA 90 bp CTCTCCTGCTTCAAGGCCCCCAATGGTGGGGAAGAAACAGGTGGCTaGATGCCTGGGCCATTCTCCTGGGCCAGCTCAAAGGAAGAGGGG +
Preference number: 5 (lower is better)
Translates to: LSCFKAPNGGEETGG*MPGPFSWASSKEEG
Trigger: CCCCTCTTCCTTTGAGCTGGCCCAGGAGAATGGCCCAGGCATGCAGCCACCTGTTTCTTCCCCACCATTGGGGGCCTTGAAGCAGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS CCA 90 bp CTGCGCCGGGGTCCGTCTGCCCCATCTACGAGTCTCGTAAACGATTaGCCTCCGCCACTGTCGCTTAGAAAGAAGCCAGCCTGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LRRGPSAPSTSLVND*PPPLSLRKKPACFP
Trigger: TGGGAAGCAGGCTGGCTTCTTTCTAAGCGACAGTGGCGGAGGCCAATCGTTTACGAGACTCGTAGATGGGGCAGACGGACCCCGGCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS-3UTR CAA 90 bp TGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTATGGCCCCCTCACCCTaGCCCAAGGCAGGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: WRGVSIHDTPISPSLNLSMAPSP*PKAGKA
Trigger: GGCCTTGCCTGCCTTGGGCAAGGGTGAGGGGGCCAT...AGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCATGGCCCCCTCACCCTaGCCCAAGGCAGGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSMAPSP*PKAGKA
Trigger: GGCCTTGCCTGCCTTGGGCAAGGGTGAGGGGGCCAT...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATTCCCGGCACTGTTCCTaGCACTCCAGGCAGCGAAAG +
Preference number: 5 (lower is better)
Translates to: PWRLVVPNSPLPSPDERHSRHCS*HSRQRK
Trigger: CTTTCGCTGCCTGGAGTGCAAGGAACAGTGCCGGGA...ATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AAGCACAAGCCACAGTCGAGGCACTGCTGGGCACCATCCTCCACCCTCAACCCCTTGGCTTGCAGGAAGTaGCCCCCACACTCAGGACAG +
Preference number: 5 (lower is better)
Translates to: KHKPQSRHCWAPSSTLNPLACRK*PPHSGQ
Trigger: CTGTCCTGAGTGTGGGGGCAACTTCCTGCAAGCCAA...GGGGTTGAGGGTGGAGGATGGTGCCCAGCAGTGCCTCGACTGTGGCTTGTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCAGGGCAGATGGGGCACTaGTGGAAAACCTCGCAGTGC +
Preference number: 5 (lower is better)
Translates to: PQTLQVSGPPEAGRGESPGQMGH*WKTSQC
Trigger: GCACTGCGAGGTTTTCCACAAGTGCCCCATCTGCCC...TGGAGACTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR CAA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGGTGCGGAAGTGGGTCTaGAGGTTTAGAGGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWVRKWV*RFRGLS
Trigger: CGACAGCCCTCTAAACCTCAAGACCCACTTCCGCAC...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS GCA 90 bp GTAAACGATTGGCCTCCGCCACTGTCGCTTAGAAAGAAGCCAGCCTaGTTCCCAGCTTGCCTACTGGAAGGGGGAGCACCCAGGTGCGTC +
Preference number: 5 (lower is better)
Translates to: VNDWPPPLSLRKKPA*FPACLLEGGAPRCV
Trigger: GACGCACCTGGGTGCTCCCCCTTCCAGTAGGCAAGCTGGGAAGCAGGCTGGCTTCTTTCTAAGCGACAGTGGCGGAGGCCAATCGTTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS CCA 90 bp GCAGCTCTCCTGCTTCAAGGCCCCCAATGGTGGGGAAGAAACAGGTaGCTGCATGCCTGGGCCATTCTCCTGGGCCAGCTCAAAGGAAGA +
Preference number: 5 (lower is better)
Translates to: AALLLQGPQWWGRNR*LHAWAILLGQLKGR
Trigger: TCTTCCTTTGAGCTGGCCCAGGAGAATGGCCCAGGCATGCAGCCACCTGTTTCTTCCCCACCATTGGGGGCCTTGAAGCAGGAGAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACGGCAGCACCACAGCCTaGCGAGCCACACTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GSTLLGLQGQTQREVANNGSTTA*RATLAA
Trigger: GGCAGCCAGTGTGGCTCGCAAGGCTGTGGTGCTGCC...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGCTGTTGAGGATCTTGTaGAAGGCCTCCACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGLLRIL*KASTRL
Trigger: CAGCCTGGTGGAGGCCTTCAACAAGATCCTCAACAG...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGGGCTGTTGAGGATCTTGTaGAAGGCCTCCACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PEAGRGESPPSGSDLDGGLLRIL*KASTRL
Trigger: CAGCCTGGTGGAGGCCTTCAACAAGATCCTCAACAG...CCCTCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCCAGGTTGGGCACACATaGCTGGTGGCCCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPQVGHT*LVAPGA
Trigger: TGCCCCTGGGGCCACCAGCAATGTGTGCCCAACCTG...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGCCACAGGCATCATGGGGCAGGTaGGGCACACATTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: CVRKWVLRFRGLSQLLPQASWGR*GTHCWW
Trigger: CCACCAGCAATGTGTGCCCAACCTGCCCCATGATGC...CTGTGGCAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGCTGAAGCTGCAGCGATaGGGGAGCATCATGGGGCAG +
Preference number: 5 (lower is better)
Translates to: AGPGLEEESSSPCLKELWLKLQR*GSIMGQ
Trigger: CTGCCCCATGATGCTCCCCAATCGCTGCAGCTTCAG...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGCCACCCTTGAGGCCTTaGCTCCCTAGTTCCCGCCGA +
Preference number: 5 (lower is better)
Translates to: LMNAMPCVRKWVLRFRGLPPLRP*LPSSRR
Trigger: TCGGCGGGAACTAGGGAGCAAAGGCCTCAAGGGTGG...CAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTCATCGGGGTCAGACCTaGATGGAGGGGCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: CRALMNAMPCVRKWVLRFHRGQT*MEGPLP
Trigger: AGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGATG...AAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATGGAGTGCGGAAGTGGGTCTaGAGGTTTAGAGGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: PPEAGRGESPPSGSDLDGVRKWV*RFRGLS
Trigger: CGACAGCCCTCTAAACCTCAAGACCCACTTCCGCAC...TCCATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CTCTTGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGGGTCAGTCCCAGGCCTaGGAGACTAGTTGTCCCCAA +
Preference number: 5 (lower is better)
Translates to: LLPQTLQVSGPPEAGRGEGQSQA*ETSCPQ
Trigger: TTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACC...CTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTTGAGTGCCAGTGAGTaGGGGTTGGGCGGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: CLKELWRGVSIHDTPISPLSASE*GLGGGG
Trigger: CCCGCCCCCGCCCAACCCCAACTCACTGGCACTCAA...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCGCAGGGGTAGGGGGCTaGAGTGCCAGTGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPAGVGG*SASELG
Trigger: CCCCAACTCACTGGCACTCAAGCCCCCTACCCCTGC...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS TCA 90 bp GACTTGTCCACTGGCCCCTCATCATCATCTTCTTCCTTCAAGGGCTaGCAGACGGGCACTTTGGGGGAGGCAAGAGGGCTCTGGTGCCCT +
Preference number: 5 (lower is better)
Translates to: DLSTGPSSSSSSFKG*QTGTLGEARGLWCP
Trigger: AGGGCACCAGAGCCCTCTTGCCTCCCCCAAAGTGCCCGTCTGTCAGCCCTTGAAGGAAGAAGATGATGATGAGGGGCCAGTGGACAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS TCA 90 bp CCTACACGGCGAGAGACGTGCAGACAGGCCTCCCGGAGATGGGTCTaGAAATTGGCTTGCAGGAAGTTGCCCCCACACTCAGGACAGACA +
Preference number: 5 (lower is better)
Translates to: PTRRETCRQASRRWV*KLACRKLPPHSGQT
Trigger: TGTCTGTCCTGAGTGTGGGGGCAACTTCCTGCAAGCCAATTTTCAGACCCATCTCCGGGAGGCCTGTCTGCACGTCTCTCGCCGTGTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
ENST00000459919.1
CDS GCA 90 bp ACTGTGCCGCCCCCTGTACTTGGCCCAGTAGCTGTCTTTGAAGGTTaGACCATCACCACCGAGGCACCATTCACCTTCTGTCCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: TVPPPVLGPVAVFEG*TITTEAPFTFCPPV
Trigger: GACTGGGGGACAGAAGGTGAATGGTGCCTCGGTGGTGATGGTGCAACCTTCAAAGACAGCTACTGGGCCAAGTACAGGGGGCGGCACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCTGCCCTGGAGACTGCTaGAAGAAGGGCACCCCAGCA +
Preference number: 5 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGCPGDC*KKGTPA
Trigger: TGCTGGGGTGCCCTTCTTCAAGCAGTCTCCAGGGCA...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGCTGGTGGGCTCAGGTTaGGCCTATAGGCAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: RRNGGSTLLGLQGQTQRELVGSG*AYRQGA
Trigger: TGCTCCCTGCCTATAGGCCAAACCTGAGCCCACCAG...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGCAAAGACGAGCCCCTTGTCCTaGTGTTCACGTGCATGCAGG +
Preference number: 5 (lower is better)
Translates to: LFLWLMKRCRLREPGEAKTSPLS*CSRACR
Trigger: CCTGCATGCACGTGAACACAAGGACAAGGGGCTCGT...CTTTGCCTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGCTGAAGCTGCAGCGATaGGGGAGCATCATGGGGCAG +
Preference number: 5 (lower is better)
Translates to: LMNAMPCVRKWVLRFRGLLKLQR*GSIMGQ
Trigger: CTGCCCCATGATGCTCCCCAATCGCTGCAGCTTCAG...CAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCGGGCAGATGGGGCACTaGTGGAAAACCTCGCAGTGC +
Preference number: 5 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGGQMGH*WKTSQC
Trigger: GCACTGCGAGGTTTTCCACAAGTGCCCCATCTGCCC...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CAA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCACCCTTGAGGCCTTaGCTCCCTAGTTCCCGCCGA +
Preference number: 5 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGPPLRP*LPSSRR
Trigger: TCGGCGGGAACTAGGGAGCAAAGGCCTCAAGGGTGG...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTCCACCCTTGAGGCCTTaGCTCCCTAGTTCCCGCCGA +
Preference number: 5 (lower is better)
Translates to: WRGVSIHDTPISPSLNLSPPLRP*LPSSRR
Trigger: TCGGCGGGAACTAGGGAGCAAAGGCCTCAAGGGTGG...AGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GCACTGGCTTTACCCACACCCCGTCTCTTCTTGTGGCTGATGAAACGGTGTCGGCATCGGGGTCAGACCTaGATGGAGGGGCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: ALALPTPRLFLWLMKRCRHRGQT*MEGPLP
Trigger: AGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGATG...CCGACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGTGGGTAAAGCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGCCATGCCTGAAGGAATaGTGGAGAGGTGTGTCCATC +
Preference number: 5 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGPCLKE*WRGVSI
Trigger: GATGGACACACCTCTCCACAATTCCTTCAGGCATGG...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACGCAGGGGTAGGGGGCTaGAGTGCCAGTGAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNAGVGG*SASELG
Trigger: CCCCAACTCACTGGCACTCAAGCCCCCTACCCCTGC...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS GCA 90 bp ACCCAACTGTACGCTCACCACCTTTGGACCCTCAGAAGTAGGTGTTaGAGGGGACAGCTTCAAGAGGCTAGCCTCAGCCAAGAAGGCCCC +
Preference number: 5 (lower is better)
Translates to: TQLYAHHLWTLRSRC*RGQLQEASLSQEGP
Trigger: GGGGCCTTCTTGGCTGAGGCTAGCCTCTTGAAGCTGTCCCCTGCAACACCTACTTCTGAGGGTCCAAAGGTGGTGAGCGTACAGTTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS GCA 90 bp GCATGGCAGTACTGGCGTTCTGGATGGTGGCCACAGGCAGCACAGTaGCTTTCAGCCTTGTACCATCACCCAACTGTACGCTCACCACCT +
Preference number: 5 (lower is better)
Translates to: AWQYWRSGWWPQAAQ*LSALYHHPTVRSPP
Trigger: AGGTGGTGAGCGTACAGTTGGGTGATGGTACAAGGCTGAAAGGCACTGTGCTGCCTGTGGCCACCATCCAGAACGCCAGTACTGCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGTGCCCTGGAGACTGCTaGAAGAAGGGCACCCCAGCA +
Preference number: 5 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGCPGDC*KKGTPA
Trigger: TGCTGGGGTGCCCTTCTTCAAGCAGTCTCCAGGGCA...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp CCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGCAGTGCCTTTCAGCCTaGTACCATCACCCAACTGTA +
Preference number: 5 (lower is better)
Translates to: PQPRDQAAVGKTRLQEEGQCLSA*YHHPTV
Trigger: TACAGTTGGGTGATGGTACAAGGCTGAAAGGCACTG...CCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp GCCGAGGGATCAGGCAGCAGTAGGGAAAACCAGGCTCCAAGAGGAAGGGGCTGGAGCAGGTTCTTGCTGTaGAGGATCTTGTTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: AEGSGSSRENQAPRGRGWSRFLL*RILLKA
Trigger: GGCCTTCAACAAGATCCTCAACAGCAAGAACCTGCT...CCAGCCCCTTCCTCTTGGAGCCTGGTTTTCCCTACTGCTGCCTGATCCCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATAGCAGGTTCTTGCTGTaGAGGATCTTGTTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GPPEAGRGESPPSGSDLDSRFLL*RILLKA
Trigger: GGCCTTCAACAAGATCCTCAACAGCAAGAACCTGCT...ATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCTGGTGGGCTCAGGTTaGGCCTATAGGCAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGLVGSG*AYRQGA
Trigger: TGCTCCCTGCCTATAGGCCAAACCTGAGCCCACCAG...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGGCATCATGGGGCAGGTaGGGCACACATTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGASWGR*GTHCWW
Trigger: CCACCAGCAATGTGTGCCCAACCTGCCCCATGATGC...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCGCATCATGGGGCAGGTaGGGCACACATTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPASWGR*GTHCWW
Trigger: CCACCAGCAATGTGTGCCCAACCTGCCCCATGATGC...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAACTGAAGCTGCAGCGATaGGGGAGCATCATGGGGCAG +
Preference number: 5 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKLKLQR*GSIMGQ
Trigger: CTGCCCCATGATGCTCCCCAATCGCTGCAGCTTCAG...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGTCTTGGTCACTACCACCTCTTCCCTGAGAAGGGCGGGCCTTCCATGTTCTCTCTGAAGCTGCAGCGATaGGGGAGCATCATGGGGCAG +
Preference number: 5 (lower is better)
Translates to: CLGHYHLFPEKGGPSMFSLKLQR*GSIMGQ
Trigger: CTGCCCCATGATGCTCCCCAATCGCTGCAGCTTCAG...AGAGAACATGGAAGGCCCGCCCTTCTCAGGGAAGAGGTGGTAGTGACCAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CAA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGTTGGCTTGCAGGAAGTaGCCCCCACACTCAGGACAG +
Preference number: 5 (lower is better)
Translates to: RRNGGSTLLGLQGQTQRELACRK*PPHSGQ
Trigger: CTGTCCTGAGTGTGGGGGCAACTTCCTGCAAGCCAA...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCCCTGATGAACGCCATGGTCTGAAAATTGGCTaGCAGGAAGTTGCCCCCACA +
Preference number: 5 (lower is better)
Translates to: PWRLVVPNSPLPSPDERHGLKIG*QEVAPT
Trigger: TGTGGGGGCAACTTCCTGCAAGCCAATTTTCAGACC...ATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACCCACCCTTGAGGCCTTaGCTCCCTAGTTCCCGCCGA +
Preference number: 5 (lower is better)
Translates to: GSTLLGLQGQTQREVANNPPLRP*LPSSRR
Trigger: TCGGCGGGAACTAGGGAGCAAAGGCCTCAAGGGTGG...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGGTGCGGAAGTGGGTCTaGAGGTTTAGAGGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: LMNAMPCVRKWVLRFRGLVRKWV*RFRGLS
Trigger: CGACAGCCCTCTAAACCTCAAGACCCACTTCCGCAC...CAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTGGTCAGTCCCAGGCCTaGGAGACTAGTTGTCCCCAA +
Preference number: 5 (lower is better)
Translates to: EEWRVHSTRTPGPNPKGGGQSQA*ETSCPQ
Trigger: TTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACC...ACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCGGTCAGTCCCAGGCCTaGGAGACTAGTTGTCCCCAA +
Preference number: 5 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGGQSQA*ETSCPQ
Trigger: TTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACC...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS TCA 90 bp ACCATTTCCTTGCGGTCTTCCCACCGTCTAAATCGCCATATAATCTaGTGGATGGGGTCCTCGCGCGGTTCAGCTCCTGGGCGACAGCGT +
Preference number: 5 (lower is better)
Translates to: TISLRSSHRLNRHII*WMGSSRGSAPGRQR
Trigger: ACGCTGTCGCCCAGGAGCTGAACCGCGCGAGGACCCCATCCATCAGATTATATGGCGATTTAGACGGTGGGAAGACCGCAAGGAAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS CCA 90 bp TTCTTGCTGTTGAGGATCTTGTTGAAGGCCTCCACCAGGCTGGACTaGGTCCGTGATATCACTGTGCCGCCCCCTGTACTTGGCCCAGTA +
Preference number: 5 (lower is better)
Translates to: FLLLRILLKASTRLD*VRDITVPPPVLGPV
Trigger: TACTGGGCCAAGTACAGGGGGCGGCACAGTGATATCACGGACCCAGTCCAGCCTGGTGGAGGCCTTCAACAAGATCCTCAACAGCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS CCA 90 bp AGGCTCCTCACTGCAAGAGTCAGAAGACTGGCGGCGTTTCCGACCTaGCCCCTGAAGAAAAGTGGAAGAAACTGGGCTCTGGCACTGGAA +
Preference number: 5 (lower is better)
Translates to: RLLTARVRRLAAFPT*PLKKSGRNWALALE
Trigger: TTCCAGTGCCAGAGCCCAGTTTCTTCCACTTTTCTTCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAGTGAGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436614.1
CDS-3UTR CAA 90 bp CCTTCTTCATGTGGGCCACGTATTCATCACGCTCAGGGAACCAGGAGTGACACATGCCCTGGAGACTGCTaGAAGAAGGGCACCCCAGCA +
Preference number: 5 (lower is better)
Translates to: PSSCGPRIHHAQGTRSDTCPGDC*KKGTPA
Trigger: TGCTGGGGTGCCCTTCTTCAAGCAGTCTCCAGGGCA...TGTGTCACTCCTGGTTCCCTGAGCGTGATGAATACGTGGCCCACATGAAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CAA 90 bp CTGGTCAGTCCCAGGCCTTGGAGACTAGTTGTCCCCAACAGCCCCCTGCCGAGCGATGTTTTAATGGTCTaGATCCGCACCTTAAGAGGC +
Preference number: 5 (lower is better)
Translates to: LVSPRPWRLVVPNSPLPSDVLMV*IRTLRG
Trigger: GCCTCTTAAGGTGCGGATCAAGACCATTAAAACATC...GCTCGGCAGGGGGCTGTTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CAA 90 bp CGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGACTGTTGAGGATCTTGTaGAAGGCCTCCACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: RALMNAMPCVRKWVLRFRLLRIL*KASTRL
Trigger: CAGCCTGGTGGAGGCCTTCAACAAGATCCTCAACAG...TCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TTGCCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTGCAGGGAGCAGGTTCTaGCTGTTGAGGATCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LPQTLQVSGPPEAGRGESAGSRF*LLRILL
Trigger: CAACAAGATCCTCAACAGCAAGAACCTGCTCCCTGC...AGACTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGCCACAGGCAGGGAGCAGGTTCTaGCTGTTGAGGATCTTGTTG +
Preference number: 5 (lower is better)
Translates to: CVRKWVLRFRGLSQLLPQAGSRF*LLRILL
Trigger: CAACAAGATCCTCAACAGCAAGAACCTGCTCCCTGC...CTGTGGCAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTCTGGTGGGCTCAGGTTaGGCCTATAGGCAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: CLKELWRGVSIHDTPISPLVGSG*AYRQGA
Trigger: TGCTCCCTGCCTATAGGCCAAACCTGAGCCCACCAG...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGGTGGGCTCAGGTTaGGCCTATAGGCAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNLVGSG*AYRQGA
Trigger: TGCTCCCTGCCTATAGGCCAAACCTGAGCCCACCAG...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTACGAGCCCCTTGTCCTaGTGTTCACGTGCATGCAGG +
Preference number: 5 (lower is better)
Translates to: WRGVSIHDTPISPSLNLSTSPLS*CSRACR
Trigger: CCTGCATGCACGTGAACACAAGGACAAGGGGCTCGT...AGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp ATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGTCGCAGCTCTTGGTCTGGATGTGGGACTaGATGGAGTTCACACCCCCA +
Preference number: 5 (lower is better)
Translates to: MPCVRKWVLRFRGLSQLLVWMWD*MEFTPP
Trigger: TGGGGGTGTGAACTCCATCAAGTCCCACATCCAGAC...CAAGAGCTGCGACAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426871.1
CDS-3UTR CAA 90 bp CTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGCAAAGACACCCCGTCTCTTCTaGTGGCTGATGAAACGGTGT +
Preference number: 5 (lower is better)
Translates to: LFLWLMKRCRLREPGEAKTPRLF*WLMKRC
Trigger: ACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGT...CTTTGCCTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGGTGCGGAAGTGGGTCTaGAGGTTTAGAGGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGVRKWV*RFRGLS
Trigger: CGACAGCCCTCTAAACCTCAAGACCCACTTCCGCAC...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAACACAGATCTGAAAGGTaGTTCCGCTCCTGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKHRSER*FRSWCG
Trigger: CCCGCACCAGGAGCGGAACAACCTTTCAGATCTGTG...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324048.9
CDS-3UTR CAA 90 bp TCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCGGCAGATCCCAGACCTaGGTGGGCTCCAAAATCCAG +
Preference number: 5 (lower is better)
Translates to: SSPCLKELWRGVSIHDTPGRSQT*VGSKIQ
Trigger: CTGGATTTTGGAGCCCACCAAGGTCTGGGATCTGCC...GGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324048.9
CDS TCA 90 bp GCAGCAAGTGCTGGTCGAAGTGTGAGGAGAGGAGGGGTTTGTGAGTaGAGACTGTGTCGCACATGGCGCACTTGTAGATCAGCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: AASAGRSVRRGGVCE*RLCRTWRTCRSAWP
Trigger: AGGCCAAGCTGATCTACAAGTGCGCCATGTGCGACACAGTCTTCACTCACAAACCCCTCCTCTCCTCACACTTCGACCAGCACTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS TCA 90 bp CTTAAAGACACTGACACGCTGGGGCAGCAAGTGCTGGTCGAAGTGTaGGGAGAGGAGGGGTTTGTGAGTGAAGACTGTGTCGCACATGGC +
Preference number: 5 (lower is better)
Translates to: LKDTDTLGQQVLVEV*GEEGFVSEDCVAHG
Trigger: GCCATGTGCGACACAGTCTTCACTCACAAACCCCTCCTCTCCTCACACTTCGACCAGCACTTGCTGCCCCAGCGTGTCAGTGTCTTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000459919.1
CDS-3UTR CAA 90 bp CTCTTCTTGTGGCTGATGAAACGGTGTCGGCTCAGGGAGCCAGGGGAGGCAAAGCAGTGCCTTTCAGCCTaGTACCATCACCCAACTGTA +
Preference number: 5 (lower is better)
Translates to: LFLWLMKRCRLREPGEAKQCLSA*YHHPTV
Trigger: TACAGTTGGGTGATGGTACAAGGCTGAAAGGCACTG...CTTTGCCTCCCCTGGCTCCCTGAGCCGACACCGTTTCATCAGCCACAAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CAA 90 bp TGTCTTGGTCACTACCACCTCTTCCCTGAGAAGGGCGGGCCTTCCATGTTCTCTCTGTTGAGGATCTTGTaGAAGGCCTCCACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: CLGHYHLFPEKGGPSMFSLLRIL*KASTRL
Trigger: CAGCCTGGTGGAGGCCTTCAACAAGATCCTCAACAG...AGAGAACATGGAAGGCCCGCCCTTCTCAGGGAAGAGGTGGTAGTGACCAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CAA 90 bp GTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCTTGCTGTTGAGGATCTaGTTGAAGGCCTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: VLGSERRNGGSTLLGLQGLLLRI*LKASTR
Trigger: CCTGGTGGAGGCCTTCAACAAGATCCTCAACAGCAA...GCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACACGAGCCCCTTGTCCTaGTGTTCACGTGCATGCAGG +
Preference number: 5 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNTSPLS*CSRACR
Trigger: CCTGCATGCACGTGAACACAAGGACAAGGGGCTCGT...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTGAGGTTTAGAGGGCTGGGTCTGAAAATTGGCTaGCAGGAAGTTGCCCCCACA +
Preference number: 5 (lower is better)
Translates to: LMNAMPCVRKWVLRFRGLGLKIG*QEVAPT
Trigger: TGTGGGGGCAACTTCCTGCAAGCCAATTTTCAGACC...CAGCCCTCTAAACCTCAAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCGGGCTGTCGCAGCTCTaGCCACAGACCTTACAGGTC +
Preference number: 5 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTGLSQL*PQTLQV
Trigger: GACCTGTAAGGTCTGTGGCAAGAGCTGCGACAGCCC...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACGGTCAGTCCCAGGCCTaGGAGACTAGTTGTCCCCAA +
Preference number: 5 (lower is better)
Translates to: GSTLLGLQGQTQREVANNGQSQA*ETSCPQ
Trigger: TTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACC...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS TCA 90 bp AGGAACCCAGCTTCTGTGTGGTGGGCACTGAGAGCAGAACCGCATTaGGTCGGAGTGGAGCACAGAAGTGTAGGTCCTTTTGCGCTGTTT +
Preference number: 5 (lower is better)
Translates to: RNPASVWWALRAEPH*VGVEHRSVGPFALF
Trigger: AAACAGCGCAAAAGGACCTACACTTCTGTGCTCCACTCCGACTCAATGCGGTTCTGCTCTCAGTGCCCACCACACAGAAGCTGGGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS CCA 90 bp GCCTTTCAGCCTTGTACCATCACCCAACTGTACGCTCACCACCTTTaGACCCTCAGAAGTAGGTGTTGCAGGGGACAGCTTCAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: AFQPCTITQLYAHHL*TLRSRCCRGQLQEA
Trigger: AGCCTCTTGAAGCTGTCCCCTGCAACACCTACTTCTGAGGGTCCAAAGGTGGTGAGCGTACAGTTGGGTGATGGTACAAGGCTGAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGTTGCTGTTGAGGATCTaGTTGAAGGCCTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGLLLRI*LKASTR
Trigger: CCTGGTGGAGGCCTTCAACAAGATCCTCAACAGCAA...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTAGCAGGTTCTTGCTGTaGAGGATCTTGTTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: EEWRVHSTRTPGPNPKGGSRFLL*RILLKA
Trigger: GGCCTTCAACAAGATCCTCAACAGCAAGAACCTGCT...ACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGAGCAGGTTCTTGCTGTaGAGGATCTTGTTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: RRNGGSTLLGLQGQTQRESRFLL*RILLKA
Trigger: GGCCTTCAACAAGATCCTCAACAGCAAGAACCTGCT...CTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAATGGCCCCCTCACCCTaGCCCAAGGCAGGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: NINVNENSPAEGSGSSREMAPSP*PKAGKA
Trigger: GGCCTTGCCTGCCTTGGGCAAGGGTGAGGGGGCCAT...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCGGTCTGAAAATTGGCTaGCAGGAAGTTGCCCCCACA +
Preference number: 5 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSGLKIG*QEVAPT
Trigger: TGTGGGGGCAACTTCCTGCAAGCCAATTTTCAGACC...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATGGGCAGATGGGGCACTaGTGGAAAACCTCGCAGTGC +
Preference number: 5 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHGQMGH*WKTSQC
Trigger: GCACTGCGAGGTTTTCCACAAGTGCCCCATCTGCCC...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CAA 90 bp GAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTCAGCATGGTCCTTTTTaGGGCAAAGAGCAGAGGACA +
Preference number: 5 (lower is better)
Translates to: EEWRVHSTRTPGPNPKGGQHGPF*GKEQRT
Trigger: TGTCCTCTGCTCTTTGCCCAAAAAAGGACCATGCTG...ACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CAA 90 bp GGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCACCATCGGGGTCAGACCTTGATCTCTTCTTCTTCAGGTaGGAGAGACAGGAATTAACA +
Preference number: 5 (lower is better)
Translates to: GPPEAGRGESPPSGSDLDLFFFR*ERQELT
Trigger: TGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAG...ATCAAGGTCTGACCCCGATGGTGGAGACTCACCCCTGCCTGCTTCTGGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGGAGGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAACCATGCCTGAAGGAATaGTGGAGAGGTGTGTCCATC +
Preference number: 5 (lower is better)
Translates to: WRVHSTRTPGPNPKGGCKPCLKE*WRGVSI
Trigger: GATGGACACACCTCTCCACAATTCCTTCAGGCATGG...TTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGGATGTTTTAATGGTCTaGATCCGCACCTTAAGAGGC +
Preference number: 5 (lower is better)
Translates to: AGPGLEEESSSPCLKELWDVLMV*IRTLRG
Trigger: GCCTCTTAAGGTGCGGATCAAGACCATTAAAACATC...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp AGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCCAGTGCCTTTCAGCCTaGTACCATCACCCAACTGTA +
Preference number: 5 (lower is better)
Translates to: RGVSIHDTPISPSLNLSSQCLSA*YHHPTV
Trigger: TACAGTTGGGTGATGGTACAAGGCTGAAAGGCACTG...GCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp GGGTCCACTCTACTAGGACTCCAGGGCCAAACCCAAAGGGAGGTTGCAAATAACGCAGGGAGCAGGTTCTaGCTGTTGAGGATCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GSTLLGLQGQTQREVANNAGSRF*LLRILL
Trigger: CAACAAGATCCTCAACAGCAAGAACCTGCTCCCTGC...GTTATTTGCAACCTCCCTTTGGGTTTGGCCCTGGAGTCCTAGTAGAGTGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CCACAGACCTTACAGGTCAGTGGGCCTCCAGAAGCAGGCAGGGGTGAGTCTCCAAACTTTTTCACTGACTaGCCATGCTCCTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: PQTLQVSGPPEAGRGESPNFFTD*PCSFFM
Trigger: CATGAAGAAGGAGCATGGCAAGTCAGTGAAAAAGTT...TGGAGACTCACCCCTGCCTGCTTCTGGAGGCCCACTGACCTGTAAGGTCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTACACCCCGTCTCTTCTaGTGGCTGATGAAACGGTGT +
Preference number: 5 (lower is better)
Translates to: CLKELWRGVSIHDTPISPTPRLF*WLMKRC
Trigger: ACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGT...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGCCCCCTGCCGAGCCCTGATGAACGCCATGCCATGCGTGCGGAAGTGGGTCTTAAACCCAAAGGGAGGTaGCAAATAACTAGAATAATC +
Preference number: 5 (lower is better)
Translates to: SPLPSPDERHAMRAEVGLKPKGR*QITRII
Trigger: GATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT...AAGACCCACTTCCGCACGCATGGCATGGCGTTCATCAGGGCTCGGCAGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCCATGCCTGAAGGAATaGTGGAGAGGTGTGTCCATC +
Preference number: 5 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNPCLKE*WRGVSI
Trigger: GATGGACACACCTCTCCACAATTCCTTCAGGCATGG...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCGCAGGGAGCAGGTTCTaGCTGTTGAGGATCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SSSPCLKELWRGVSIHDTAGSRF*LLRILL
Trigger: CAACAAGATCCTCAACAGCAAGAACCTGCTCCCTGC...GGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATGTCTGGATGTGGGACTaGATGGAGTTCACACCCCCA +
Preference number: 5 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHVWMWD*MEFTPP
Trigger: TGGGGGTGTGAACTCCATCAAGTCCCACATCCAGAC...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CAA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTCAGCATGGTCCTTTTTaGGGCAAAGAGCAGAGGACA +
Preference number: 5 (lower is better)
Translates to: CLKELWRGVSIHDTPISPQHGPF*GKEQRT
Trigger: TGTCCTCTGCTCTTTGCCCAAAAAAGGACCATGCTG...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CAA 90 bp GCAGGGCCCGGCCTAGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAACTTTTTCACTGACTaGCCATGCTCCTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: AGPGLEEESSSPCLKELWNFFTD*PCSFFM
Trigger: CATGAAGAAGGAGCATGGCAAGTCAGTGAAAAAGTT...CCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCTAGGCCGGGCCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTGGACACACAGTGTTCTaGACAATGACACTGACTACA +
Preference number: 5 (lower is better)
Translates to: WRGVSIHDTPISPSLNLSGHTVF*TMTLTT
Trigger: TGTAGTCAGTGTCATTGTCAAGAACACTGTGTGTCC...AGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp AGGAGCGCTCACACAGGCGACAGGGGAACTTTTTCACTGACTTGCCATGCTCCTGGACACACAGTGTTCTaGACAATGACACTGACTACA +
Preference number: 5 (lower is better)
Translates to: RSAHTGDRGTFSLTCHAPGHTVF*TMTLTT
Trigger: TGTAGTCAGTGTCATTGTCAAGAACACTGTGTGTCC...AGGAGCATGGCAAGTCAGTGAAAAAGTTCCCCTGTCGCCTGTGTGAGCGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449313.5
CDS-3UTR CAA 90 bp GAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACGGTCTGAAAATTGGCTaGCAGGAAGTTGCCCCCACA +
Preference number: 5 (lower is better)
Translates to: ESSSPCLKELWRGVSIHDGLKIG*QEVAPT
Trigger: TGTGGGGGCAACTTCCTGCAAGCCAATTTTCAGACC...GTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS CCA 90 bp CATTCATGTCCGCATGGAATCAATTCATATTCTTCACGGATCTTCTaGGGTCCACACAGATCTGAAAGGTTGTTCCGCTCCTGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: HSCPHGINSYSSRIF*GPHRSERLFRSWCG
Trigger: CCCGCACCAGGAGCGGAACAACCTTTCAGATCTGTGTGGACCCCAGAAGATCCGTGAAGAATATGAATTGATTCCATGCGGACATGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324048.9
CDS-3UTR CAA 90 bp TGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTGGACACACAGTGTTCTaGACAATGACACTGACTACA +
Preference number: 5 (lower is better)
Translates to: CLKELWRGVSIHDTPISPGHTVF*TMTLTT
Trigger: TGTAGTCAGTGTCATTGTCAAGAACACTGTGTGTCC...AGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTCCTTCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp CTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGACCACTTGCTGTTGAGGATCTaGTTGAAGGCCTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: LHIVQVTEKERPEWRFDHLLLRI*LKASTR
Trigger: CCTGGTGGAGGCCTTCAACAAGATCCTCAACAGCAA...GTGGTCGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CAA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGCAGGTTGGGCACACATaGCTGGTGGCCCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: QITRIILKCSSSSGWRDRQVGHT*LVAPGA
Trigger: TGCCCCTGGGGCCACCAGCAATGTGTGCCCAACCTG...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAATTGGCTTGCAGGAAGTaGCCCCCACACTCAGGACAG +
Preference number: 5 (lower is better)
Translates to: NINVNENSPAEGSGSSRELACRK*PPHSGQ
Trigger: CTGTCCTGAGTGTGGGGGCAACTTCCTGCAAGCCAA...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATCAGCATGGTCCTTTTTaGGGCAAAGAGCAGAGGACA +
Preference number: 5 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHQHGPF*GKEQRT
Trigger: TGTCCTCTGCTCTTTGCCCAAAAAAGGACCATGCTG...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CAA 90 bp AGTGTTGGGCTCAGAAAGGAGGAATGGAGGGTCCACTCTACTAGGACTCCAGGGAACTTTTTCACTGACTaGCCATGCTCCTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: SVGLRKEEWRVHSTRTPGNFFTD*PCSFFM
Trigger: CATGAAGAAGGAGCATGGCAAGTCAGTGAAAAAGTT...CCCTGGAGTCCTAGTAGAGTGGACCCTCCATTCCTCCTTTCTGAGCCCAACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATCTCTTCTTCTTCAGGTaGGAGAGACAGGAATTAACA +
Preference number: 5 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHLFFFR*ERQELT
Trigger: TGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAG...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACTTGAGTGCCAGTGAGTaGGGGTTGGGCGGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: LQITRIILKCSSSSGWRDLSASE*GLGGGG
Trigger: CCCGCCCCCGCCCAACCCCAACTCACTGGCACTCAA...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATAGGTCCAAGGGAGTTTaGCCTTCCATGCCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHRSKGV*PSMPFS
Trigger: AGAAAAAGGCATGGAAGGCAAAACTCCCTTGGACCT...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp GAATTGTGGAGAGGTGTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACAACTTTTTCACTGACTaGCCATGCTCCTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: ELWRGVSIHDTPISPSLNNFFTD*PCSFFM
Trigger: CATGAAGAAGGAGCATGGCAAGTCAGTGAAAAAGTT...GTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACACACCTCTCCACAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTAACAAAATTGAGTGCCAGTGAGTaGGGGTTGGGCGGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: NNPQMLFFFRLERQELTKLSASE*GLGGGG
Trigger: CCCGCCCCCGCCCAACCCCAACTCACTGGCACTCAA...TTTTGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp CTCCACATTGTCCAAGTCACAGAAAAAGAGAGGCCTGAATGGAGATTCGACCACAGGTCCAAGGGAGTTTaGCCTTCCATGCCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: LHIVQVTEKERPEWRFDHRSKGV*PSMPFS
Trigger: AGAAAAAGGCATGGAAGGCAAAACTCCCTTGGACCT...GTGGTCGAATCTCCATTCAGGCCTCTCTTTTTCTGTGACTTGGACAATGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CAA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGTCCCGGCACTGTTCCTaGCACTCCAGGCAGCGAAAG +
Preference number: 5 (lower is better)
Translates to: QITRIILKCSSSSGWRDRSRHCS*HSRQRK
Trigger: CTTTCGCTGCCTGGAGTGCAAGGAACAGTGCCGGGA...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AATATTAATGTTAATGAAAACTCCCCAGCCGAGGGATCAGGCAGCAGTAGGGAAACACCCCGTCTCTTCTaGTGGCTGATGAAACGGTGT +
Preference number: 5 (lower is better)
Translates to: NINVNENSPAEGSGSSRETPRLF*WLMKRC
Trigger: ACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGT...TTCCCTACTGCTGCCTGATCCCTCGGCTGGGGAGTTTTCATTAACATTAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000436614.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GTGTCCATCCATGACACCCCCATCAGTCCTTCCCTGAACCTGTCTAGCAGGCATAAACCCAAAGGGAGGTaGCAAATAACTAGAATAATC +
Preference number: 5 (lower is better)
Translates to: VSIHDTPISPSLNLSSRHKPKGR*QITRII
Trigger: GATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT...ATGCCTGCTAGACAGGTTCAGGGAAGGACTGATGGGGGTGTCATGGATGGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCCCGGCACTGTTCCTaGCACTCCAGGCAGCGAAAG +
Preference number: 5 (lower is better)
Translates to: KPKGRLQITRIILKCSSSSRHCS*HSRQRK
Trigger: CTTTCGCTGCCTGGAGTGCAAGGAACAGTGCCGGGA...AGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATCATCGGGGTCAGACCTaGATGGAGGGGCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNHRGQT*MEGPLP
Trigger: AGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGATG...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTCATCGGGGTCAGACCTaGATGGAGGGGCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: KPKGRLQITRIILKCSSSHRGQT*MEGPLP
Trigger: AGGAAGAGGCCCCTCCATCAAGGTCTGACCCCGATG...AGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACGGGCTGTCGCAGCTCTaGCCACAGACCTTACAGGTC +
Preference number: 5 (lower is better)
Translates to: LQITRIILKCSSSSGWRDGLSQL*PQTLQV
Trigger: GACCTGTAAGGTCTGTGGCAAGAGCTGCGACAGCCC...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATGGGCTGTCGCAGCTCTaGCCACAGACCTTACAGGTC +
Preference number: 5 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNGLSQL*PQTLQV
Trigger: GACCTGTAAGGTCTGTGGCAAGAGCTGCGACAGCCC...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp GGGAGATGGGTGATGAGGTATGAACGGATGCCTCAGTGTCCAAGATACAAAAGGCTCTTCTTCTTCAGGTaGGAGAGACAGGAATTAACA +
Preference number: 5 (lower is better)
Translates to: GRWVMRYERMPQCPRYKRLFFFR*ERQELT
Trigger: TGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAG...CCTTTTGTATCTTGGACACTGAGGCATCCGTTCATACCTCATCACCCATCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CAA 90 bp AATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATTAACAAAAGCATCATGGGGCAGGTaGGGCACACATTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: NNPQMLFFFRLERQELTKASWGR*GTHCWW
Trigger: CCACCAGCAATGTGTGCCCAACCTGCCCCATGATGC...TTTTGTTAATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATGGTCAGTCCCAGGCCTaGGAGACTAGTTGTCCCCAA +
Preference number: 5 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNGQSQA*ETSCPQ
Trigger: TTGGGGACAACTAGTCTCCAAGGCCTGGGACTGACC...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp TTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACGTCTGGATGTGGGACTaGATGGAGTTCACACCCCCA +
Preference number: 5 (lower is better)
Translates to: LQITRIILKCSSSSGWRDVWMWD*MEFTPP
Trigger: TGGGGGTGTGAACTCCATCAAGTCCCACATCCAGAC...GTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
CDS-3UTR CAA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGACACCCCGTCTCTTCTaGTGGCTGATGAAACGGTGT +
Preference number: 5 (lower is better)
Translates to: QITRIILKCSSSSGWRDRTPRLF*WLMKRC
Trigger: ACACCGTTTCATCAGCCACAAGAAGAGACGGGGTGT...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AGAGGAGGAAAGTTCCAGTCCATGCCTGAAGGAATTGTGGAGAGGTGTGTCCATAAACCCAAAGGGAGGTaGCAAATAACTAGAATAATC +
Preference number: 5 (lower is better)
Translates to: RGGKFQSMPEGIVERCVHKPKGR*QITRII
Trigger: GATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT...ATGGACACACCTCTCCACAATTCCTTCAGGCATGGACTGGAACTTTCCTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp AAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTTGCTGTTGAGGATCTaGTTGAAGGCCTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: KPKGRLQITRIILKCSSSLLLRI*LKASTR
Trigger: CCTGGTGGAGGCCTTCAACAAGATCCTCAACAGCAA...AGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS-3UTR CAA 90 bp ATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGAATAGGTCCAAGGGAGTTTaGCCTTCCATGCCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: ITRIILKCSSSSGWRDRNRSKGV*PSMPFS
Trigger: AGAAAAAGGCATGGAAGGCAAAACTCCCTTGGACCT...ATTCCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGGATGTTTTAATGGTCTaGATCCGCACCTTAAGAGGC +
Preference number: 5 (lower is better)
Translates to: QITRIILKCSSSSGWRDRDVLMV*IRTLRG
Trigger: GCCTCTTAAGGTGCGGATCAAGACCATTAAAACATC...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS-3UTR CAA 90 bp CAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTTCAGGTTGGAGAGACAGGGCACTACATAGAAGTTaGCTTTTTCCCTGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: QITRIILKCSSSSGWRDRALHRS*LFPCLS
Trigger: AGACAGGCAGGGAAAAAGCAAACTTCTATGTAGTGC...CCTGTCTCTCCAACCTGAAGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336715.11
CDS-3UTR CAA 90 bp AAACCCAAAGGGAGGTTGCAAATAACTAGAATAATCCTCAAATGCTCTTCTTCTAAACCCAAAGGGAGGTaGCAAATAACTAGAATAATC +
Preference number: 5 (lower is better)
Translates to: KPKGRLQITRIILKCSSSKPKGR*QITRII
Trigger: GATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT...AGAAGAAGAGCATTTGAGGATTATTCTAGTTATTTGCAACCTCCCTTTGGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS GCA 72 bp TTCCCAGCTTGCCTACTGGAAGGGGGAGCACCCAGGTaGGTCTCCGCCCCTCGCTCCCTACTGGCCGCTCGA +
Preference number: 6 (lower is better)
Translates to: FPACLLEGGAPR*VSAPRSLLAAR
Trigger: TCGAGCGGCCAGTAGGGAGCGAGGGGCGGAGACGCACCTGGGTGCTCCCCCTTCCAGTAGGCAAGCTGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS GCA 72 bp CCATATCGGCAGATCCCAGACTTGTTCCGCTCCTGGTaGGGGCCGAGACCCGGCGGTCTCTACCCCGCTCCA +
Preference number: 6 (lower is better)
Translates to: PYRQIPDLFRSW*GPRPGGLYPAP
Trigger: TGGAGCGGGGTAGAGACCGCCGGGTCTCGGCCCGCACCAGGAGCGGAACAAGTCTGGGATCTGCCGATATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336715.11
ENST00000449313.5
CDS GCA 72 bp GGTCCACACAGATCTGAAAGGTTGTTCCGCTCCTGGTaGGGGCCGAGACCCGGCGGTCTCTACCCCGCTCCA +
Preference number: 6 (lower is better)
Translates to: GPHRSERLFRSW*GPRPGGLYPAP
Trigger: TGGAGCGGGGTAGAGACCGCCGGGTCTCGGCCCGCACCAGGAGCGGAACAACCTTTCAGATCTGTGTGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324048.9
CDS GCA 72 bp CCAGACCTCTCCCCATTGGCTGCGCCGGGGTCCGTCTaGCCCATCTACGAGTCTCGTAAACGATTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: PDLSPLAAPGSV*PIYESRKRLAS
Trigger: GGAGGCCAATCGTTTACGAGACTCGTAGATGGGGCAGACGGACCCCGGCGCAGCCAATGGGGAGAGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS CCA 72 bp TCCTCATCTGCAGCCTCGGCCCCACTAGAGGGACTCTaGGGACTTCCTGGGGAAGACTTGTCCACTGGCCCC +
Preference number: 6 (lower is better)
Translates to: SSSAASAPLEGL*GLPGEDLSTGP
Trigger: GGGGCCAGTGGACAAGTCTTCCCCAGGAAGTCCCCAGAGTCCCTCTAGTGGGGCCGAGGCTGCAGATGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS TCA 72 bp CAGAGACAGGTGGGACAGCTACAGGCAGCAGCGGTGTaGTGTCCGGCTGCCCCACCATCTGGTCAAGGGCTA +
Preference number: 6 (lower is better)
Translates to: QRQVGQLQAAAV*CPAAPPSGQGL
Trigger: TAGCCCTTGACCAGATGGTGGGGCAGCCGGACATCACACCGCTGCTGCCTGTAGCTGTCCCACCTGTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS GCA 72 bp CCCAGGCAGCACCACAGCCTTGCGAGCCACACTGGCTaGCATCAGCATGGCAGTACTGGCGTTCTGGATGGT +
Preference number: 6 (lower is better)
Translates to: PRQHHSLASHTG*HQHGSTGVLDG
Trigger: ACCATCCAGAACGCCAGTACTGCCATGCTGATGGCAGCCAGTGTGGCTCGCAAGGCTGTGGTGCTGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS CCA 72 bp CCACAGCCTTGCGAGCCACACTGGCTGCCATCAGCATaGCAGTACTGGCGTTCTGGATGGTGGCCACAGGCA +
Preference number: 6 (lower is better)
Translates to: PQPCEPHWLPSA*QYWRSGWWPQA
Trigger: TGCCTGTGGCCACCATCCAGAACGCCAGTACTGCCATGCTGATGGCAGCCAGTGTGGCTCGCAAGGCTGTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS CCA 72 bp CAGGGCCAGCCCAGCCTCAGCTGGTGGGCTCAGGTTTaGCCTATAGGCAGGGAGCAGGTTCTTGCTGTTGAG +
Preference number: 6 (lower is better)
Translates to: QGQPSLSWWAQV*PIGREQVLAVE
Trigger: CTCAACAGCAAGAACCTGCTCCCTGCCTATAGGCCAAACCTGAGCCCACCAGCTGAGGCTGGGCTGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS CCA 72 bp TTAGAAAGAAGCCAGCCTGCTTCCCAGCTTGCCTACTaGAAGGGGGAGCACCCAGGTGCGTCTCCGCCCCTC +
Preference number: 6 (lower is better)
Translates to: LERSQPASQLAY*KGEHPGASPPL
Trigger: GAGGGGCGGAGACGCACCTGGGTGCTCCCCCTTCCAGTAGGCAAGCTGGGAAGCAGGCTGGCTTCTTTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS GCA 72 bp AGGCCCCCAATGGTGGGGAAGAAACAGGTGGCTGCATaGCTGGGCCATTCTCCTGGGCCAGCTCAAAGGAAG +
Preference number: 6 (lower is better)
Translates to: RPPMVGKKQVAA*LGHSPGPAQRK
Trigger: CTTCCTTTGAGCTGGCCCAGGAGAATGGCCCAGGCATGCAGCCACCTGTTTCTTCCCCACCATTGGGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS GCA 72 bp CTGTCGCTTAGAAAGAAGCCAGCCTGCTTCCCAGCTTaGCTACTGGAAGGGGGAGCACCCAGGTGCGTCTCC +
Preference number: 6 (lower is better)
Translates to: LSLRKKPACFPA*LLEGGAPRCVS
Trigger: GGAGACGCACCTGGGTGCTCCCCCTTCCAGTAGGCAAGCTGGGAAGCAGGCTGGCTTCTTTCTAAGCGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS CCA 72 bp CCCCAATGGTGGGGAAGAAACAGGTGGCTGCATGCCTaGGCCATTCTCCTGGGCCAGCTCAAAGGAAGAGGG +
Preference number: 6 (lower is better)
Translates to: PQWWGRNRWLHA*AILLGQLKGRG
Trigger: CCCTCTTCCTTTGAGCTGGCCCAGGAGAATGGCCCAGGCATGCAGCCACCTGTTTCTTCCCCACCATTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS CAA 90 bp CCCAGGTGCGTCTCCGCCCCTCGCTCCCTACTGGCCGCTCGAAGCTaGAAGCTGCAGTTCACTTTCGCGAATGTAAGGAACCCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: PRCVSAPRSLLAARS*KLQFTFANVRNPAS
Trigger: AGAAGCTGGGTTCCTTACATTCGCGAAAGTGAACTGCAGCTTCAAGCTTCGAGCGGCCAGTAGGGAGCGAGGGGCGGAGACGCACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS GCA 72 bp GAGCTGCCATGCCAGCCTTGTCCCGGCACTGTTCCTTaGACTCCAGGCAGCGAAAGCATGTGTAAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: ELPCQPCPGTVP*TPGSESMCKQR
Trigger: CCTCTGCTTACACATGCTTTCGCTGCCTGGAGTGCAAGGAACAGTGCCGGGACAAGGCTGGCATGGCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
ENST00000459919.1
CDS CAA 90 bp GAGCCTCCAGCCAGGGCCTCAGACTGCTCGGGACACACAGTGTTCTaGACAATGACACTGACTACAGAAATGTCTGGCGGTGGCAGGCCA +
Preference number: 6 (lower is better)
Translates to: EPPARASDCSGHTVF*TMTLTTEMSGGGRP
Trigger: TGGCCTGCCACCGCCAGACATTTCTGTAGTCAGTGTCATTGTCAAGAACACTGTGTGTCCCGAGCAGTCTGAGGCCCTGGCTGGAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000443959.1
ENST00000449313.5
CDS CAA 90 bp TGGCGTTCTGGATGGTGGCCACAGGCAGCACAGTGCCTTTCAGCCTaGTACCATCACCCAACTGTACGCTCACCACCTTTGGACCCTCAG +
Preference number: 6 (lower is better)
Translates to: WRSGWWPQAAQCLSA*YHHPTVRSPPLDPQ
Trigger: CTGAGGGTCCAAAGGTGGTGAGCGTACAGTTGGGTGATGGTACAAGGCTGAAAGGCACTGTGCTGCCTGTGGCCACCATCCAGAACGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS TCA 72 bp CGAGAGACGTGCAGACAGGCCTCCCGGAGATGGGTCTaGAAATTGGCTTGCAGGAAGTTGCCCCCACACTCA +
Preference number: 6 (lower is better)
Translates to: RETCRQASRRWV*KLACRKLPPHS
Trigger: TGAGTGTGGGGGCAACTTCCTGCAAGCCAATTTTCAGACCCATCTCCGGGAGGCCTGTCTGCACGTCTCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
ENST00000459919.1
CDS TCA 72 bp GAGTCAGAAGACTGGCGGCGTTTCCGACCTGGCCCCTaGAGAAAAGTGGAAGAAACTGGGCTCTGGCACTGG +
Preference number: 6 (lower is better)
Translates to: ESEDWRRFRPGP*RKVEETGLWHW
Trigger: CCAGTGCCAGAGCCCAGTTTCTTCCACTTTTCTTCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436614.1
CDS CCA 72 bp CGTGCAGACAGGCCTCCCGGAGATGGGTCTGAAAATTaGCTTGCAGGAAGTTGCCCCCACACTCAGGACAGA +
Preference number: 6 (lower is better)
Translates to: RADRPPGDGSEN*LAGSCPHTQDR
Trigger: TCTGTCCTGAGTGTGGGGGCAACTTCCTGCAAGCCAATTTTCAGACCCATCTCCGGGAGGCCTGTCTGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
ENST00000459919.1
CDS CCA 72 bp GGTCCGTCTGCCCCATCTACGAGTCTCGTAAACGATTaGCCTCCGCCACTGTCGCTTAGAAAGAAGCCAGCC +
Preference number: 6 (lower is better)
Translates to: GPSAPSTSLVND*PPPLSLRKKPA
Trigger: GGCTGGCTTCTTTCTAAGCGACAGTGGCGGAGGCCAATCGTTTACGAGACTCGTAGATGGGGCAGACGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS CAA 72 bp GTCTCCGCCCCTCGCTCCCTACTGGCCGCTCGAAGCTaGAAGCTGCAGTTCACTTTCGCGAATGTAAGGAAC +
Preference number: 6 (lower is better)
Translates to: VSAPRSLLAARS*KLQFTFANVRN
Trigger: GTTCCTTACATTCGCGAAAGTGAACTGCAGCTTCAAGCTTCGAGCGGCCAGTAGGGAGCGAGGGGCGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS TCA 72 bp ACTGACACGCTGGGGCAGCAAGTGCTGGTCGAAGTGTaGGGAGAGGAGGGGTTTGTGAGTGAAGACTGTGTC +
Preference number: 6 (lower is better)
Translates to: TDTLGQQVLVEV*GEEGFVSEDCV
Trigger: GACACAGTCTTCACTCACAAACCCCTCCTCTCCTCACACTTCGACCAGCACTTGCTGCCCCAGCGTGTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000459919.1
CDS TCA 72 bp TTGCGGTCTTCCCACCGTCTAAATCGCCATATAATCTaGTGGATGGGGTCCTCGCGCGGTTCAGCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: LRSSHRLNRHII*WMGSSRGSAPG
Trigger: CCCAGGAGCTGAACCGCGCGAGGACCCCATCCATCAGATTATATGGCGATTTAGACGGTGGGAAGACCGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS GCA 72 bp TACTGGCGTTCTGGATGGTGGCCACAGGCAGCACAGTaGCTTTCAGCCTTGTACCATCACCCAACTGTACGC +
Preference number: 6 (lower is better)
Translates to: YWRSGWWPQAAQ*LSALYHHPTVR
Trigger: GCGTACAGTTGGGTGATGGTACAAGGCTGAAAGGCACTGTGCTGCCTGTGGCCACCATCCAGAACGCCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS CCA 72 bp CTTGACAATGACACTGACTACAGAAATGTCTGGCGGTaGCAGGCCATGGTCAGAGGCCTGGGCTGGAACTCC +
Preference number: 6 (lower is better)
Translates to: LDNDTDYRNVWR*QAMVRGLGWNS
Trigger: GGAGTTCCAGCCCAGGCCTCTGACCATGGCCTGCCACCGCCAGACATTTCTGTAGTCAGTGTCATTGTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000443959.1
ENST00000449313.5
CDS CCA 72 bp TTGAGGATCTTGTTGAAGGCCTCCACCAGGCTGGACTaGGTCCGTGATATCACTGTGCCGCCCCCTGTACTT +
Preference number: 6 (lower is better)
Translates to: LRILLKASTRLD*VRDITVPPPVL
Trigger: AAGTACAGGGGGCGGCACAGTGATATCACGGACCCAGTCCAGCCTGGTGGAGGCCTTCAACAAGATCCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS CCA 72 bp AGAGGACAAGACGGGCACTTAAAGACACTGACACGCTaGGGCAGCAAGTGCTGGTCGAAGTGTGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: RGQDGHLKTLTR*GSKCWSKCEER
Trigger: CCTCTCCTCACACTTCGACCAGCACTTGCTGCCCCAGCGTGTCAGTGTCTTTAAGTGCCCGTCTTGTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000459919.1
CDS CAA 72 bp GGATGGTGGCCACAGGCAGCACAGTGCCTTTCAGCCTaGTACCATCACCCAACTGTACGCTCACCACCTTTG +
Preference number: 6 (lower is better)
Translates to: GWWPQAAQCLSA*YHHPTVRSPPL
Trigger: CAAAGGTGGTGAGCGTACAGTTGGGTGATGGTACAAGGCTGAAAGGCACTGTGCTGCCTGTGGCCACCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS TCA 72 bp GCCAAGGGGGCAGGTGGATCAGGATCTGAGGGGACCTaGGTTACAGTCCTTGTGATATTCCCGCAGGATGTT +
Preference number: 6 (lower is better)
Translates to: AKGAGGSGSEGT*VTVLVIFPQDV
Trigger: AACATCCTGCGGGAATATCACAAGGACTGTAACTCAGGTCCCCTCAGATCCTGATCCACCTGCCCCCTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS TCA 72 bp GGAAAACCTCGCAGTGCGACGTCTGGATGTGGGACTTaGTGGAGTTCACACCCCCAAACACCACTGAACAGC +
Preference number: 6 (lower is better)
Translates to: GKPRSATSGCGT*WSSHPQTPLNS
Trigger: GCTGTTCAGTGGTGTTTGGGGGTGTGAACTCCATCAAGTCCCACATCCAGACGTCGCACTGCGAGGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000459919.1
CDS TCA 72 bp AGACTGTGTCGCACATGGCGCACTTGTAGATCAGCCTaGAGTGAGGACAGTGCAGACATCAGGCAGGGTTGG +
Preference number: 6 (lower is better)
Translates to: RLCRTWRTCRSA*SEDSADIRQGW
Trigger: CCAACCCTGCCTGATGTCTGCACTGTCCTCACTTCAGGCTGATCTACAAGTGCGCCATGTGCGACACAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459919.1
CDS GCA 72 bp TACGCTCACCACCTTTGGACCCTCAGAAGTAGGTGTTaGAGGGGACAGCTTCAAGAGGCTAGCCTCAGCCAA +
Preference number: 6 (lower is better)
Translates to: YAHHLWTLRSRC*RGQLQEASLSQ
Trigger: TTGGCTGAGGCTAGCCTCTTGAAGCTGTCCCCTGCAACACCTACTTCTGAGGGTCCAAAGGTGGTGAGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS GCA 72 bp CCCCCTGTACTTGGCCCAGTAGCTGTCTTTGAAGGTTaGACCATCACCACCGAGGCACCATTCACCTTCTGT +
Preference number: 6 (lower is better)
Translates to: PPVLGPVAVFEG*TITTEAPFTFC
Trigger: ACAGAAGGTGAATGGTGCCTCGGTGGTGATGGTGCAACCTTCAAAGACAGCTACTGGGCCAAGTACAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000449313.5
CDS CCA 72 bp AGTGTTCTTGACAATGACACTGACTACAGAAATGTCTaGCGGTGGCAGGCCATGGTCAGAGGCCTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: SVLDNDTDYRNV*RWQAMVRGLGW
Trigger: CCAGCCCAGGCCTCTGACCATGGCCTGCCACCGCCAGACATTTCTGTAGTCAGTGTCATTGTCAAGAACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000443959.1
ENST00000449313.5
CDS CCA 72 bp ACTGCAAGAGTCAGAAGACTGGCGGCGTTTCCGACCTaGCCCCTGAAGAAAAGTGGAAGAAACTGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: TARVRRLAAFPT*PLKKSGRNWAL
Trigger: CAGAGCCCAGTTTCTTCCACTTTTCTTCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436614.1
CDS CAA 90 bp AAGGAACCCAGCTTCTGTGTGGTGGGCACTGAGAGCAGAACCGCATaGAGTCGGAGTGGAGCACAGAAGTGTAGGTCCTTTTGCGCTGTT +
Preference number: 6 (lower is better)
Translates to: KEPSFCVVGTESRTA*SRSGAQKCRSFCAV
Trigger: AACAGCGCAAAAGGACCTACACTTCTGTGCTCCACTCCGACTCAATGCGGTTCTGCTCTCAGTGCCCACCACACAGAAGCTGGGTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS TCA 72 bp GCTGGTCGAAGTGTGAGGAGAGGAGGGGTTTGTGAGTaGAGACTGTGTCGCACATGGCGCACTTGTAGATCA +
Preference number: 6 (lower is better)
Translates to: AGRSVRRGGVCE*RLCRTWRTCRS
Trigger: TGATCTACAAGTGCGCCATGTGCGACACAGTCTTCACTCACAAACCCCTCCTCTCCTCACACTTCGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000459919.1
CDS TCA 72 bp GCTTCTGTGTGGTGGGCACTGAGAGCAGAACCGCATTaGGTCGGAGTGGAGCACAGAAGTGTAGGTCCTTTT +
Preference number: 6 (lower is better)
Translates to: ASVWWALRAEPH*VGVEHRSVGPF
Trigger: AAAAGGACCTACACTTCTGTGCTCCACTCCGACTCAATGCGGTTCTGCTCTCAGTGCCCACCACACAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS CCA 72 bp CACTTGTGGAAAACCTCGCAGTGCGACGTCTGGATGTaGGACTTGATGGAGTTCACACCCCCAAACACCACT +
Preference number: 6 (lower is better)
Translates to: HLWKTSQCDVWM*DLMEFTPPNTT
Trigger: AGTGGTGTTTGGGGGTGTGAACTCCATCAAGTCCCACATCCAGACGTCGCACTGCGAGGTTTTCCACAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000459919.1
CDS CAA 72 bp GCCAGGGCCTCAGACTGCTCGGGACACACAGTGTTCTaGACAATGACACTGACTACAGAAATGTCTGGCGGT +
Preference number: 6 (lower is better)
Translates to: ARASDCSGHTVF*TMTLTTEMSGG
Trigger: ACCGCCAGACATTTCTGTAGTCAGTGTCATTGTCAAGAACACTGTGTGTCCCGAGCAGTCTGAGGCCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000443959.1
ENST00000449313.5
CDS CAA 72 bp TGGAAAACCTCGCAGTGCGACGTCTGGATGTGGGACTaGATGGAGTTCACACCCCCAAACACCACTGAACAG +
Preference number: 6 (lower is better)
Translates to: WKTSQCDVWMWD*MEFTPPNTTEQ
Trigger: CTGTTCAGTGGTGTTTGGGGGTGTGAACTCCATCAAGTCCCACATCCAGACGTCGCACTGCGAGGTTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000426871.1
ENST00000459919.1
CDS CAA 72 bp AGCTTCTGTGTGGTGGGCACTGAGAGCAGAACCGCATaGAGTCGGAGTGGAGCACAGAAGTGTAGGTCCTTT +
Preference number: 6 (lower is better)
Translates to: SFCVVGTESRTA*SRSGAQKCRSF
Trigger: AAAGGACCTACACTTCTGTGCTCCACTCCGACTCAATGCGGTTCTGCTCTCAGTGCCCACCACACAGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS TCA 72 bp GTCCTTTTGCGCTGTTTCAAGCTAAACCCGTGTCACTaGTGCCGTACAGAAGTTACAGAATGGGACGCCACC +
Preference number: 6 (lower is better)
Translates to: VLLRCFKLNPCH*CRTEVTEWDAT
Trigger: GGTGGCGTCCCATTCTGTAACTTCTGTACGGCATCAGTGACACGGGTTTAGCTTGAAACAGCGCAAAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS CCA 72 bp CTCCAGGCCCCTCATTTTCTTCTGGCCCAGAATGGATaGCTTCATTCGCATCAATGTCAGGGATGTCAAAGG +
Preference number: 6 (lower is better)
Translates to: LQAPHFLLAQNG*LHSHQCQGCQR
Trigger: CCTTTGACATCCCTGACATTGATGCGAATGAAGCCATCCATTCTGGGCCAGAAGAAAATGAGGGGCCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000443959.1
ENST00000449313.5
CDS CAA 72 bp GTCCTTGTGATATTCCCGCAGGATGTTTTAATGGTCTaGATCCGCACCTTAAGAGGCCTAGAGGAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: VLVIFPQDVLMV*IRTLRGLEELE
Trigger: CTCCAGCTCCTCTAGGCCTCTTAAGGTGCGGATCAAGACCATTAAAACATCCTGCGGGAATATCACAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324048.9
ENST00000336715.11
ENST00000449313.5
CDS CAA 72 bp CCACCCCAAACATTACGTCATCCGCTGACCATTTCCTaGCGGTCTTCCCACCGTCTAAATCGCCATATAATC +
Preference number: 6 (lower is better)
Translates to: PPQTLRHPLTIS*RSSHRLNRHII
Trigger: GATTATATGGCGATTTAGACGGTGGGAAGACCGCAAGGAAATGGTCAGCGGATGACGTAATGTTTGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443959.1
CDS CCA 72 bp CCGCATGGAATCAATTCATATTCTTCACGGATCTTCTaGGGTCCACACAGATCTGAAAGGTTGTTCCGCTCC +
Preference number: 6 (lower is better)
Translates to: PHGINSYSSRIF*GPHRSERLFRS
Trigger: GGAGCGGAACAACCTTTCAGATCTGTGTGGACCCCAGAAGATCCGTGAAGAATATGAATTGATTCCATGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324048.9