Pregenerated sensors for ZNF680 (Homo sapiens)

Ensembl gene IDs: ENSG00000173041

Ensembl transcript IDs: ENST00000447137.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR TCA 90 bp	AGCCAGTCACAAAAAGACAGAGATTGTATGAGATATATGAAGCAGTTACACTCTAAGGTGACAGTGTTATaGTTCATTATGACTAGCACA	+
Preference number: 2 (lower is better) Translates to: SQSQKDRDCMRYMKQLHSKVTVL*FIMTST Trigger: TGTGCTAGTCATAATGAATCATAACACTGTCACCTT...AGAGTGTAACTGCTTCATATATCTCATACAATCTCTGTCTTTTTGTGACTGGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447137.2
3UTR-3UTR GCA 90 bp	AGCCAGTCACAAAAAGACAGAGATTGTATGAGATATATGAAGCAGTTACACTCTGTGGTGTTTGAAAAGTaGCAGGAAATGGGTAAAATT	+
Preference number: 2 (lower is better) Translates to: SQSQKDRDCMRYMKQLHSVVFEK*QEMGKI Trigger: AATTTTACCCATTTCCTGGCACTTTTCAAACACCAC...AGAGTGTAACTGCTTCATATATCTCATACAATCTCTGTCTTTTTGTGACTGGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000447137.2
3UTR-3UTR CAA 90 bp	AGCCAGTCACAAAAAGACAGAGATTGTATGAGATATATGAAGCAGTTACACTCTAAAACAGAGTGGTGTTaGAAAAGTGCCAGGAAATGG	+
Preference number: 3 (lower is better) Translates to: SQSQKDRDCMRYMKQLHSKTEWC*KSARKW Trigger: CCATTTCCTGGCACTTTTCAAACACCACTCTGTTTT...AGAGTGTAACTGCTTCATATATCTCATACAATCTCTGTCTTTTTGTGACTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000447137.2
CDS-3UTR CCA 90 bp	AGCCAGTCACAAAAAGACAGAGATTGTATGAGATATATGAAGCAGTTACACTCTAACACAGTAAGACTCTaGGGGTTTGGCTACCATCTC	+
Preference number: 4 (lower is better) Translates to: SQSQKDRDCMRYMKQLHSNTVRL*GFGYHL Trigger: GAGATGGTAGCCAAACCCCCAGAGTCTTACTGTGTT...AGAGTGTAACTGCTTCATATATCTCATACAATCTCTGTCTTTTTGTGACTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447137.2
CDS-3UTR TCA 90 bp	AGCCAGTCACAAAAAGACAGAGATTGTATGAGATATATGAAGCAGTTACACTCTGGCAGTAAGATAACTTaGGACCAGGAGTTCAAGATC	+
Preference number: 4 (lower is better) Translates to: SQSQKDRDCMRYMKQLHSGSKIT*DQEFKI Trigger: GATCTTGAACTCCTGGTCTCAAGTTATCTTACTGCC...AGAGTGTAACTGCTTCATATATCTCATACAATCTCTGTCTTTTTGTGACTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447137.2
CDS-3UTR CCA 90 bp	AGCCAGTCACAAAAAGACAGAGATTGTATGAGATATATGAAGCAGTTACACTCTTTAGAGAAAACAGAGTaGTGTTTGAAAAGTGCCAGG	+
Preference number: 4 (lower is better) Translates to: SQSQKDRDCMRYMKQLHSLEKTE*CLKSAR Trigger: CCTGGCACTTTTCAAACACCACTCTGTTTTCTCTAA...AGAGTGTAACTGCTTCATATATCTCATACAATCTCTGTCTTTTTGTGACTGGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000447137.2