Pregenerated sensors for ZNF677 (Homo sapiens)
Ensembl gene IDs: ENSG00000197928Ensembl transcript IDs: ENST00000333952.8, ENST00000593539.1, ENST00000594517.5, ENST00000594681.5, ENST00000595293.1, ENST00000598513.6, ENST00000598806.5, ENST00000599012.5, ENST00000599328.1, ENST00000601413.5, ENST00000601828.5
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAAGCACTTATCCCTCCGGCTGTCCTGATTCTCTCTCAGCATACTaGGACATGCAGGCTACTCTACTCAGTGGCTTCAAGAGGCACCTC | + |
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Preference number: 1 (lower is better) Translates to: RSTYPSGCPDSLSAY*DMQATLLSGFKRHL Trigger: GAGGTGCCTCTTGAAGCCACTGAGTAGAGTAGCCTGCATGTCCCAGTATGCTGAGAGAGAATCAGGACAGCCGGAGGGATAAGTGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| 3UTR TCA 90 bp | CCACAGAAACCAGAAGGTCAGAAGCACTTATCCCTCCGGCTGTCCTaGTTCTCTCTCAGCATACTGGGACATGCAGGCTACTCTACTCAG | + |
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Preference number: 1 (lower is better) Translates to: PQKPEGQKHLSLRLS*FSLSILGHAGYSTQ Trigger: CTGAGTAGAGTAGCCTGCATGTCCCAGTATGCTGAGAGAGAATCAGGACAGCCGGAGGGATAAGTGCTTCTGACCTTCTGGTTTCTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| 3UTR CCA 90 bp | CAGCATATATCTAACCAGCGTTGTCACACTGCCCTTGGGAGACACTaGAAACTCCACAGAAACCAGAAGGTCAGAAGCACTTATCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: QHISNQRCHTALGRH*KLHRNQKVRSTYPS Trigger: GGAGGGATAAGTGCTTCTGACCTTCTGGTTTCTGTGGAGTTTCCAGTGTCTCCCAAGGGCAGTGTGACAACGCTGGTTAGATATATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| 3UTR GCA 90 bp | AACTTGGAGAATGCTCTTCCCAGGAGAAACTCCTACACCTTGTACTaGTGGCTCCAAGAGGATGATCAGCATATATCTAACCAGCGTTGT | + |
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Preference number: 1 (lower is better) Translates to: NLENALPRRNSYTLY*WLQEDDQHISNQRC Trigger: ACAACGCTGGTTAGATATATGCTGATCATCCTCTTGGAGCCAGCAGTACAAGGTGTAGGAGTTTCTCCTGGGAAGAGCATTCTCCAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| 3UTR CCA 90 bp | TTCCATGAAAATCTCTCAATGTCCCACCCTACTCTTCTTGTTTCATaGTCATCTTGTACTGTAACCAATCTCTCCTATAATCGACAAAGG | + |
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Preference number: 1 (lower is better) Translates to: FHENLSMSHPTLLVS*SSCTVTNLSYNRQR Trigger: CCTTTGTCGATTATAGGAGAGATTGGTTACAGTACAAGATGACCATGAAACAAGAAGAGTAGGGTGGGACATTGAGAGATTTTCATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCCCAGGAGAAACTCCTACACCTTGTACTGCTGGCTCCAAGAGGATGATCTCTCTCTCAGCATACTaGGACATGCAGGCTACTCTA | + |
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Preference number: 2 (lower is better) Translates to: LFPGETPTPCTAGSKRMISLSAY*DMQATL Trigger: TAGAGTAGCCTGCATGTCCCAGTATGCTGAGAGAGA...GATCATCCTCTTGGAGCCAGCAGTACAAGGTGTAGGAGTTTCTCCTGGGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| 3UTR-3UTR GCA 90 bp | AACTCCTACACCTTGTACTGCTGGCTCCAAGAGGATGATCAGCATATATCTAACCAGCATACTGGGACATaGAGGCTACTCTACTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: NSYTLYCWLQEDDQHISNQHTGT*RLLYSV Trigger: CACTGAGTAGAGTAGCCTGCATGTCCCAGTATGCTG...GTTAGATATATGCTGATCATCCTCTTGGAGCCAGCAGTACAAGGTGTAGGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| 3UTR-3UTR GCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGTTCCACAGATGTCCTTaGTCCTCTGACACACACCAT | + |
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Preference number: 2 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRFHRCP*SSDTHH Trigger: ATGGTGTGTGTCAGAGGAGCAAGGACATCTGTGGAA...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| 3UTR-3UTR TCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGGTATGGTTTCCATCCTaGATGTCTTCTGTTATAACC | + |
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Preference number: 2 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRVWFPS*MSSVIT Trigger: GGTTATAACAGAAGACATTCAGGATGGAAACCATAC...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| 3UTR-3UTR GCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGCTGAAGTCAGAACATTaGTTAAAGGACTTGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRLKSEH*LKDLPH Trigger: ATGTGGCAAGTCCTTTAAGCAATGTTCTGACTTCAG...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGACAAGGCTTGAACTTTaGATAAGCCTTGCCATACAT | + |
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Preference number: 2 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRTRLEL*ISLAIH Trigger: ATGTATGGCAAGGCTTATCCAAAGTTCAAGCCTTGT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| 3UTR-3UTR TCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGATGAAAAGCATGCCATaGAGATTTAACAGCAACAGA | + |
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Preference number: 2 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRMKSMP*RFNSNR Trigger: TCTGTTGCTGTTAAATCTTCATGGCATGCTTTTCAT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGTCTCTCCAATATGAATaGTGTATCCTGAAGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRSLQYE*CILKSE Trigger: TTCTGACTTCAGGATACACCATTCATATTGGAGAGA...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| 3UTR CCA 72 bp | TATCCCTCCGGCTGTCCTGATTCTCTCTCAGCATACTaGGACATGCAGGCTACTCTACTCAGTGGCTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: YPSGCPDSLSAY*DMQATLLSGFK Trigger: CTTGAAGCCACTGAGTAGAGTAGCCTGCATGTCCCAGTATGCTGAGAGAGAATCAGGACAGCCGGAGGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| 3UTR GCA 72 bp | AATGCTCTTCCCAGGAGAAACTCCTACACCTTGTACTaGTGGCTCCAAGAGGATGATCAGCATATATCTAAC | + |
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Preference number: 3 (lower is better) Translates to: NALPRRNSYTLY*WLQEDDQHISN Trigger: GTTAGATATATGCTGATCATCCTCTTGGAGCCAGCAGTACAAGGTGTAGGAGTTTCTCCTGGGAAGAGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| 3UTR-3UTR CAA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGCCTGAAGTCAGAACATaGCTTAAAGGACTTGCCACA | + |
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Preference number: 3 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRPEVRT*LKGLAT Trigger: TGTGGCAAGTCCTTTAAGCAATGTTCTGACTTCAGG...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| 3UTR GCA 72 bp | TTTAACACTGAAGTTACATCTTTCCACAGATGTCCTTaGTCCTCTGACACACACCATGAGTTTGTGACTTTT | + |
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Preference number: 3 (lower is better) Translates to: FNTEVTSFHRCP*SSDTHHEFVTF Trigger: AAAAGTCACAAACTCATGGTGTGTGTCAGAGGAGCAAGGACATCTGTGGAAAGATGTAACTTCAGTGTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| 3UTR-3UTR CAA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGAAGGACTTGCCACATTaGTATGGTTTCCATCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRKDLPH*YGFHPE Trigger: TTCAGGATGGAAACCATACAAATGTGGCAAGTCCTT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| 3UTR TCA 72 bp | AAGGTCCCCAGTCACATCAACAATTCTAAGGGGTCCTaGCCACATAAAGCATATATGTTAGACAATAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: KVPSHINNSKGS*PHKAYMLDNSF Trigger: AAAACTATTGTCTAACATATATGCTTTATGTGGTCAGGACCCCTTAGAATTGTTGATGTGACTGGGGACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| 3UTR-3UTR CAA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGCATTGCTTAAAGGACTaGCCACATTTGTATGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRHCLKD*PHLYGF Trigger: GAAACCATACAAATGTGGCAAGTCCTTTAAGCAATG...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| 3UTR GCA 72 bp | ACAATAGTTTTACCTCTCTTCTGGCACAAACCCCCATaGTCTTATAGTATATTGTATATTAGTGTTCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: TIVLPLFWHKPP*SYSILYISVLG Trigger: GCCAAGAACACTAATATACAATATACTATAAGAGCATGGGGGTTTGTGCCAGAAGAGAGGTAAAACTATTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR TCA 90 bp | GTGAGGCACCACGCCCATCCGGAATGTGTATTTCAAAAGCAACTTTCAGAGGCACCACAGGCTGCAAGGTaGGAACCATCTTCTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: VRHHAHPECVFQKQLSEAPQAAR*EPSSGG Trigger: CCCTCCAGAAGATGGTTCTCACCTTGCAGCCTGTGG...TGCCTCTGAAAGTTGCTTTTGAAATACACATTCCGGATGGGCGTGGTGCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598806.5 |
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| CDS-3UTR GCA 90 bp | ACCAGAAGGTCAGAAGCACTTATCCCTCCGGCTGTCCTGATTCTCTCTCAGCATCCAGCGTTGTCACACTaGCCTTGGGAGACACTGGAA | + |
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Preference number: 4 (lower is better) Translates to: TRRSEALIPPAVLILSQHPALSH*PWETLE Trigger: TTCCAGTGTCTCCCAAGGGCAGTGTGACAACGCTGG...ATGCTGAGAGAGAATCAGGACAGCCGGAGGGATAAGTGCTTCTGACCTTCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS-3UTR TCA 90 bp | GATTCTCTCTCAGCATACTGGGACATGCAGGCTACTCTACTCAGTGGCTTCAAGTCCCTCCGGCTGTCCTaGTTCTCTCTCAGCATACTG | + |
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Preference number: 4 (lower is better) Translates to: DSLSAYWDMQATLLSGFKSLRLS*FSLSIL Trigger: CAGTATGCTGAGAGAGAATCAGGACAGCCGGAGGGA...CTTGAAGCCACTGAGTAGAGTAGCCTGCATGTCCCAGTATGCTGAGAGAGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS-3UTR CCA 90 bp | GGAAACTCCACAGAAACCAGAAGGTCAGAAGCACTTATCCCTCCGGCTGTCCTGTACACCTTGTACTGCTaGCTCCAAGAGGATGATCAG | + |
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Preference number: 4 (lower is better) Translates to: GNSTETRRSEALIPPAVLYTLYC*LQEDDQ Trigger: CTGATCATCCTCTTGGAGCCAGCAGTACAAGGTGTA...CAGGACAGCCGGAGGGATAAGTGCTTCTGACCTTCTGGTTTCTGTGGAGTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS-3UTR CCA 90 bp | ATGCTACATTATGAAGCCTTTCCACTCTCAATCAAAAAGTTTCAATCTCCCCTTCCCGACAGCGGAGCGTaGGAACCTGTGGCCCGCGAG | + |
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Preference number: 4 (lower is better) Translates to: MLHYEAFPLSIKKFQSPLPDSGA*EPVARE Trigger: CTCGCGGGCCACAGGTTCCCACGCTCCGCTGTCGGG...AAGGGGAGATTGAAACTTTTTGATTGAGAGTGGAAAGGCTTCATAATGTAGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601413.5 |
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| CDS-3UTR GCA 90 bp | ATAGGCGTGAGGCACCACGCCCATCCGGAATGTGTATTTCAAAAGCAACTTTCAGCTCTGTCCACAGGCTaGAAGGTGAGAACCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: IGVRHHAHPECVFQKQLSALSTG*KVRTIF Trigger: GAAGATGGTTCTCACCTTGCAGCCTGTGGACAGAGC...TGAAAGTTGCTTTTGAAATACACATTCCGGATGGGCGTGGTGCCTCACGCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598806.5 |
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| CDS-3UTR CCA 90 bp | TGGAGAATGCTCTTCCCAGGAGAAACTCCTACACCTTGTACTGCTGGCTCCAAGTCTCTCTCAGCATACTaGGACATGCAGGCTACTCTA | + |
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Preference number: 4 (lower is better) Translates to: WRMLFPGETPTPCTAGSKSLSAY*DMQATL Trigger: TAGAGTAGCCTGCATGTCCCAGTATGCTGAGAGAGA...CTTGGAGCCAGCAGTACAAGGTGTAGGAGTTTCTCCTGGGAAGAGCATTCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS-3UTR CCA 90 bp | ATGCTACATTATGAAGCCTTTCCACTCTCAATCAAAAAGTTTCAATCTCCCCTTGAGCGTGGGAACCTGTaGCCCGCGAGGCGCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: MLHYEAFPLSIKKFQSPLERGNL*PARRRL Trigger: AAGCCTGCGCCTCGCGGGCCACAGGTTCCCACGCTC...AAGGGGAGATTGAAACTTTTTGATTGAGAGTGGAAAGGCTTCATAATGTAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601413.5 |
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| CDS-3UTR TCA 90 bp | GTGAGGCACCACGCCCATCCGGAATGTGTATTTCAAAAGCAACTTTCAGAGGCAAATGTAAACAGTCCCTaGGAAAGAGCCATTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VRHHAHPECVFQKQLSEANVNSP*ERAIPS Trigger: GGAGGGAATGGCTCTTTCTCAGGGACTGTTTACATT...TGCCTCTGAAAGTTGCTTTTGAAATACACATTCCGGATGGGCGTGGTGCCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598806.5 |
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| CDS-3UTR TCA 90 bp | GAGGATGATCAGCATATATCTAACCAGCGTTGTCACACTGCCCTTGGGAGACACAATGTAAACAGTCCCTaGGAAAGAGCCATTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: EDDQHISNQRCHTALGRHNVNSP*ERAIPS Trigger: GGAGGGAATGGCTCTTTCTCAGGGACTGTTTACATT...GTGTCTCCCAAGGGCAGTGTGACAACGCTGGTTAGATATATGCTGATCATCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS-3UTR TCA 90 bp | CAGCATACTGGGACATGCAGGCTACTCTACTCAGTGGCTTCAAGAGGCACCTCTACTGCACGTATGGGATaGATAATGTGGTATGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: QHTGTCRLLYSVASRGTSTARMG*IMWYEQ Trigger: TTGCTCATACCACATTATTCATCCCATACGTGCAGT...AGAGGTGCCTCTTGAAGCCACTGAGTAGAGTAGCCTGCATGTCCCAGTATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS-3UTR GCA 90 bp | AGGATGATCAGCATATATCTAACCAGCGTTGTCACACTGCCCTTGGGAGACACTTCCTACACCTTGTACTaGTGGCTCCAAGAGGATGAT | + |
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Preference number: 4 (lower is better) Translates to: RMISIYLTSVVTLPLGDTSYTLY*WLQEDD Trigger: ATCATCCTCTTGGAGCCAGCAGTACAAGGTGTAGGA...AGTGTCTCCCAAGGGCAGTGTGACAACGCTGGTTAGATATATGCTGATCATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS-3UTR CCA 90 bp | TGCTACATTATGAAGCCTTTCCACTCTCAATCAAAAAGTTTCAATCTCCCCTTTTCGGAGCGACGGGACTaGGAACGTCTTAGGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: CYIMKPFHSQSKSFNLPFSERRD*ERLRAT Trigger: CGTGGCCCTAAGACGTTCCCAGTCCCGTCGCTCCGA...AAAGGGGAGATTGAAACTTTTTGATTGAGAGTGGAAAGGCTTCATAATGTAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000601413.5 |
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| CDS-3UTR CCA 90 bp | GATTCTCTCTCAGCATACTGGGACATGCAGGCTACTCTACTCAGTGGCTTCAAGAGGAAACCTCTTCCATaGGAGAGTCCACCAAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: DSLSAYWDMQATLLSGFKRKPLP*ESPPKV Trigger: AACTTTTGGTGGACTCTCCCATGGAAGAGGTTTCCT...CTTGAAGCCACTGAGTAGAGTAGCCTGCATGTCCCAGTATGCTGAGAGAGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| 3UTR CAA 72 bp | TTGGAGAATGCTCTTCCCAGGAGAAACTCCTACACCTaGTACTGCTGGCTCCAAGAGGATGATCAGCATATA | + |
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Preference number: 4 (lower is better) Translates to: LENALPRRNSYT*YCWLQEDDQHI Trigger: TATATGCTGATCATCCTCTTGGAGCCAGCAGTACAAGGTGTAGGAGTTTCTCCTGGGAAGAGCATTCTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS-3UTR TCA 90 bp | GTACTGATATTCTGGAACCACCACTCGTCAAACCTGATTATGCGCAGAACTTCTACCACTCGTCAAACCTaGTTATGCGCAGAACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VLIFWNHHSSNLIMRRTSTTRQT*LCAELL Trigger: CAGAAGTTCTGCGCATAATCAGGTTTGACGAGTGGT...AGAAGTTCTGCGCATAATCAGGTTTGACGAGTGGTGGTTCCAGAATATCAGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601828.5 |
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| CDS-3UTR GCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGCCGGGAGACAGAGGTTaGAGTGAGCTGAGATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRPGDRG*SELRWC Trigger: GCACCATCTCAGCTCACTGCAACCTCTGTCTCCCGG...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR GCA 90 bp | TATGAGCAACAGTTTGGTCAACATGTTCGCAGATATGAGGTTGAGAACTTGGAGCAGCATACTGGGACATaGAGGCTACTCTACTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: YEQQFGQHVRRYEVENLEQHTGT*RLLYSV Trigger: CACTGAGTAGAGTAGCCTGCATGTCCCAGTATGCTG...CTCCAAGTTCTCAACCTCATATCTGCGAACATGTTGACCAAACTGTTGCTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS-3UTR CCA 90 bp | TTCTGGAACCACCACTCGTCAAACCTGATTATGCGCAGAACTTCTGAAGAAAGGGTGGTTACCATCTTCTaGAGGGATGTTATCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: FWNHHSSNLIMRRTSEERVVTIF*RDVILI Trigger: GATGAGGATAACATCCCTCCAGAAGATGGTAACCAC...CCTTTCTTCAGAAGTTCTGCGCATAATCAGGTTTGACGAGTGGTGGTTCCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601828.5 |
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| CDS-3UTR TCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGAGACAGAGGTTGCAGTaGGCTGAGATGGTGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRRQRLQ*AEMVPL Trigger: CAGTGGCACCATCTCAGCTCACTGCAACCTCTGTCT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR CCA 90 bp | GTACTGATATTCTGGAACCACCACTCGTCAAACCTGATTATGCGCAGAACTTCTAAAGATGTACAAGGGTaGTTACCATCTTCTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: VLIFWNHHSSNLIMRRTSKDVQG*LPSSGG Trigger: CCCTCCAGAAGATGGTAACCACCCTTGTACATCTTT...AGAAGTTCTGCGCATAATCAGGTTTGACGAGTGGTGGTTCCAGAATATCAGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601828.5 |
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| 3UTR CAA 72 bp | AGCAACAGTTTGGTCAACATGTTCGCAGATATGAGGTaGAGAACTTGGAGAATGCTCTTCCCAGGAGAAACT | + |
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Preference number: 4 (lower is better) Translates to: SNSLVNMFADMR*RTWRMLFPGET Trigger: AGTTTCTCCTGGGAAGAGCATTCTCCAAGTTCTCAACCTCATATCTGCGAACATGTTGACCAAACTGTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS-3UTR TCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGCCTGTATGGACTCTCTaGTGCCTAGTGAGGTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRPVWTL*CLVRFE Trigger: TTCGAACCTCACTAGGCATCAGAGAGTCCATACAGG...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR TCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGCCTTTCAAGAGAGGGTaGCTATCATTCCCCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRPFKRG*LSFPLH Trigger: ATGGAGGGGGAATGATAGTCACCCTCTCTTGAAAGG...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR TCA 90 bp | GTAAGTACTGATATTCTGGAACCACCACTCGTCAAACCTGATTATGCGCAGAACAGGTTTTGTAAGTACTaGTATTCTGGAACCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: VSTDILEPPLVKPDYAQNRFCKY*YSGTTT Trigger: AGTGGTGGTTCCAGAATATCAGTACTTACAAAACCT...GTTCTGCGCATAATCAGGTTTGACGAGTGGTGGTTCCAGAATATCAGTACTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601828.5 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGAATGTAAACAGTCCCTaGGAAAGAGCCATTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRNVNSP*ERAIPS Trigger: GGAGGGAATGGCTCTTTCTCAGGGACTGTTTACATT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS-3UTR TCA 90 bp | ATGCTACATTATGAAGCCTTTCCACTCTCAATCAAAAAGTTTCAATCTCCCCTTAATGTAAACAGTCCCTaGGAAAGAGCCATTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MLHYEAFPLSIKKFQSPLNVNSP*ERAIPS Trigger: GGAGGGAATGGCTCTTTCTCAGGGACTGTTTACATT...AAGGGGAGATTGAAACTTTTTGATTGAGAGTGGAAAGGCTTCATAATGTAGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000601413.5 ENST00000601828.5 |
||
| CDS-3UTR TCA 90 bp | TGCTACATTATGAAGCCTTTCCACTCTCAATCAAAAAGTTTCAATCTCCCCTTTAATGTAAACAGTCCCTaGGAAAGAGCCATTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CYIMKPFHSQSKSFNLPFNVNSP*ERAIPS Trigger: GGAGGGAATGGCTCTTTCTCAGGGACTGTTTACATT...AAAGGGGAGATTGAAACTTTTTGATTGAGAGTGGAAAGGCTTCATAATGTAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000601413.5 ENST00000601828.5 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGCTCAGGGGCCAAATGTaGATCCCCTATAAGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRLRGQM*IPYKNT Trigger: AGTGTTCTTATAGGGGATTCACATTTGGCCCCTGAG...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS-3UTR TCA 90 bp | GTAAGTACTGATATTCTGGAACCACCACTCGTCAAACCTGATTATGCGCAGAACCTATATGCTACATTATaGAGCCTTTCCACTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSTDILEPPLVKPDYAQNLYATL*SLSTLN Trigger: ATTGAGAGTGGAAAGGCTTCATAATGTAGCATATAG...GTTCTGCGCATAATCAGGTTTGACGAGTGGTGGTTCCAGAATATCAGTACTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601828.5 |
||
| CDS-3UTR GCA 90 bp | GTACTGATATTCTGGAACCACCACTCGTCAAACCTGATTATGCGCAGAACTTCTCATTACACATGGGTCTaGAAAACTATTTCCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLIFWNHHSSNLIMRRTSHYTWV*KTISQN Trigger: GTTTTGGGAAATAGTTTTGCAGACCCATGTGTAATG...AGAAGTTCTGCGCATAATCAGGTTTGACGAGTGGTGGTTCCAGAATATCAGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601828.5 |
||
| CDS-3UTR CCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGAGTTCAAGATCAGCCTaGCCAACATGGCGAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRSSRSA*PTWRNS Trigger: AGAGTTTCGCCATGTTGGCCAGGCTGATCTTGAACT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS-3UTR CCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGGTTTTACCTCTCTTCTaGCACAAACCCCCATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRVLPLF*HKPPCS Trigger: AGAGCATGGGGGTTTGTGCCAGAAGAGAGGTAAAAC...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGATGTTGGGTAAGGCTTaGACGTTCAGCAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRMLGKA*TFSKGF Trigger: AAAGCCTTTGCTGAACGTTCAAGCCTTACCCAACAT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS-3UTR TCA 90 bp | ATGTGGTATGAGCAACAGTTTGGTCAACATGTTCGCAGATATGAGGTTGAGAACATGAATAATGTGGTATaGGCAACAGTTTGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: MWYEQQFGQHVRRYEVENMNNVV*ATVWST Trigger: TGTTGACCAAACTGTTGCTCATACCACATTATTCAT...GTTCTCAACCTCATATCTGCGAACATGTTGACCAAACTGTTGCTCATACCACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
||
| CDS-3UTR CCA 90 bp | ATGCTACATTATGAAGCCTTTCCACTCTCAATCAAAAAGTTTCAATCTCCCCTTGTGGTTACCATCTTCTaGAGGGATGTTATCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: MLHYEAFPLSIKKFQSPLVVTIF*RDVILI Trigger: GATGAGGATAACATCCCTCCAGAAGATGGTAACCAC...AAGGGGAGATTGAAACTTTTTGATTGAGAGTGGAAAGGCTTCATAATGTAGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000601413.5 ENST00000601828.5 |
||
| CDS-3UTR CCA 90 bp | TGCTACATTATGAAGCCTTTCCACTCTCAATCAAAAAGTTTCAATCTCCCCTTTAAAGATGTACAAGGGTaGTTACCATCTTCTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CYIMKPFHSQSKSFNLPFKDVQG*LPSSGG Trigger: CCCTCCAGAAGATGGTAACCACCCTTGTACATCTTT...AAAGGGGAGATTGAAACTTTTTGATTGAGAGTGGAAAGGCTTCATAATGTAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000601413.5 ENST00000601828.5 |
||
| CDS-3UTR CCA 90 bp | TGCTACATTATGAAGCCTTTCCACTCTCAATCAAAAAGTTTCAATCTCCCCTTTCGAGGTCATATTGTGTaGGCTAAAGCAAAAAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CYIMKPFHSQSKSFNLPFRGHIV*AKAKRS Trigger: CGACCTTTTTGCTTTAGCCCACACAATATGACCTCG...AAAGGGGAGATTGAAACTTTTTGATTGAGAGTGGAAAGGCTTCATAATGTAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000601413.5 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGATGGCTTGTCATGGATaGAATACTGGTGTGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRMACHG*NTGVHY Trigger: ATAGTGCACACCAGTATTTCATCCATGACAAGCCAT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR CCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGACAAGACTTGAACTTTaGATAAAAGCCCTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRTRLEL*IKALPH Trigger: GTGTGGCAGGGCTTTTATCCAAAGTTCAAGTCTTGT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR CCA 90 bp | TGCTACATTATGAAGCCTTTCCACTCTCAATCAAAAAGTTTCAATCTCCCCTTTGATTTTAATCCGAAATaGACGCAGATCTCTAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: CYIMKPFHSQSKSFNLPFDFNPK*TQISRP Trigger: GGGTCTAGAGATCTGCGTCCATTTCGGATTAAAATC...AAAGGGGAGATTGAAACTTTTTGATTGAGAGTGGAAAGGCTTCATAATGTAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000601413.5 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGAATTCTAAGGGGTCCTaGCCACATAAAGCATATATG | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRNSKGS*PHKAYM Trigger: CATATATGCTTTATGTGGTCAGGACCCCTTAGAATT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGGATCTTTTCTGTGAGTaGGATTTTTGTTACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRDLFCE*DFCYRS Trigger: TGACCTGTAACAAAAATCTCACTCACAGAAAAGATC...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGTATTACAAATGTTTTTaGCACAAGGAGGAAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRYYKCF*HKEEVV Trigger: CACCACTTCCTCCTTGTGTCAAAAACATTTGTAATA...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGATGCTGAGTAAGATTTaGACGTTCAGTAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRMLSKI*TFSKGF Trigger: AAAGCCTTTACTGAACGTTCAAATCTTACTCAGCAT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS-3UTR TCA 90 bp | TGCTACATTATGAAGCCTTTCCACTCTCAATCAAAAAGTTTCAATCTCCCCTTTCTATATGCTACATTATaGAGCCTTTCCACTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CYIMKPFHSQSKSFNLPFLYATL*SLSTLN Trigger: ATTGAGAGTGGAAAGGCTTCATAATGTAGCATATAG...AAAGGGGAGATTGAAACTTTTTGATTGAGAGTGGAAAGGCTTCATAATGTAGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000601413.5 ENST00000601828.5 |
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| CDS-3UTR GCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGTGGCACAAACCCCCATaGTCTTATAGTATATTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRWHKPP*SYSILY Trigger: ATACAATATACTATAAGAGCATGGGGGTTTGTGCCA...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR CCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGAGAAATATCATCTTCTaGAGGGATGTTATCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRRNIIF*RDVILI Trigger: GATGAGGATAACATCCCTCCAGAAGATGATATTTCT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR CCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGACTCTTCTTGTTTCATaGTCATCTTGTACTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRTLLVS*SSCTVT Trigger: GGTTACAGTACAAGATGACCATGAAACAAGAAGAGT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR GCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGGATGAAATACTGGTGTaGACTATCTCTTATAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRDEILV*TISYRN Trigger: GTTTCTATAAGAGATAGTGCACACCAGTATTTCATC...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR CCA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGTCATGGATGAAATACTaGTGTGCACTATCTCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRSWMKY*CALSLI Trigger: TATAAGAGATAGTGCACACCAGTATTTCATCCATGA...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS CCA 90 bp | CATCACAGTTCATCTTCCTCGCATCCTCCCCGAGGTCATATTGTGTaGGCCGAGAGCGCCAGTAGCCCCGCGAGATCCGCTTCCGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: HHSSSSSHPPRGHIV*AESASSPARSASGS Trigger: CGACCCGGAAGCGGATCTCGCGGGGCTACTGGCGCTCTCGGCCCACACAATATGACCTCGGGGAGGATGCGAGGAAGATGAACTGTGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000595293.1 ENST00000598806.5 |
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| CDS CCA 90 bp | AAAGGTCGGGGCCAGTACCCACTTCAGAACGATTTTAATCCGAAATaGACGCAGATCTCTAGACCCTCTCGGAGCGACGGGACTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KGRGQYPLQNDFNPK*TQISRPSRSDGTGN Trigger: GTTCCCAGTCCCGTCGCTCCGAGAGGGTCTAGAGATCTGCGTCCATTTCGGATTAAAATCGTTCTGAAGTGGGTACTGGCCCCGACCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000594681.5 ENST00000601413.5 |
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| CDS-3UTR CAA 90 bp | GGAAACTCCACAGAAACCAGAAGGTCAGAAGCACTTATCCCTCCGGCTGTCCTGAGAAACTCCTACACCTaGTACTGCTGGCTCCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GNSTETRRSEALIPPAVLRNSYT*YCWLQE Trigger: CTCTTGGAGCCAGCAGTACAAGGTGTAGGAGTTTCT...CAGGACAGCCGGAGGGATAAGTGCTTCTGACCTTCTGGTTTCTGTGGAGTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS CCA 90 bp | TGTGTGTGCGGGCTAAGATGCCATGTTCACAGCATTAAGCACCACTaGCCACCCAGGGCAGCACGGATTATAAATCACAGCAAATACGAG | + |
|
Preference number: 5 (lower is better) Translates to: CVCGLRCHVHSIKHH*PPRAARIINHSKYE Trigger: CTCGTATTTGCTGTGATTTATAATCCGTGCTGCCCTGGGTGGCCAGTGGTGCTTAATGCTGTGAACATGGCATCTTAGCCCGCACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599328.1 |
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| CDS-3UTR CAA 90 bp | TCTCTCAGCATACTGGGACATGCAGGCTACTCTACTCAGTGGCTTCAAGAGGCATATGAGGTTGAGAACTaGGAGAATGCTCTTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSILGHAGYSTQWLQEAYEVEN*ENALPR Trigger: CCTGGGAAGAGCATTCTCCAAGTTCTCAACCTCATA...TGCCTCTTGAAGCCACTGAGTAGAGTAGCCTGCATGTCCCAGTATGCTGAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS-3UTR CAA 90 bp | ACCAGAAGGTCAGAAGCACTTATCCCTCCGGCTGTCCTGATTCTCTCTCAGCATTTCGCAGATATGAGGTaGAGAACTTGGAGAATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TRRSEALIPPAVLILSQHFADMR*RTWRML Trigger: GAGCATTCTCCAAGTTCTCAACCTCATATCTGCGAA...ATGCTGAGAGAGAATCAGGACAGCCGGAGGGATAAGTGCTTCTGACCTTCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
||
| CDS-3UTR CAA 90 bp | TCCAAGAGGATGATCAGCATATATCTAACCAGCGTTGTCACACTGCCCTTGGGAAGAGTCCACCAAAAGTaGTCCATCGCCATCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKRMISIYLTSVVTLPLGRVHQK*SIAIFW Trigger: CCAGAAGATGGCGATGGACAACTTTTGGTGGACTCT...TCCCAAGGGCAGTGTGACAACGCTGGTTAGATATATGCTGATCATCCTCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599012.5 |
||
| CDS CCA 90 bp | CATCACAGTTCATCTTCCTCGCATCCTCCCCGAGGTCATATTGTGTaGGTTCAGAACGATTTTAATCCGAAATGGACGCAGATCTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: HHSSSSSHPPRGHIV*VQNDFNPKWTQISR Trigger: TCTAGAGATCTGCGTCCATTTCGGATTAAAATCGTTCTGAACCCACACAATATGACCTCGGGGAGGATGCGAGGAAGATGAACTGTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594517.5 |
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| CDS CCA 90 bp | ATGTTCTCTTTCAAGAATGTTCTGTCACCAAGGAAACCTCTTCCATaGGAGAGTCCACCAAAAGTTGTCCATCGCCATCTTCTGGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: MFSFKNVLSPRKPLP*ESPPKVVHRHLLEG Trigger: TCCCTCCAGAAGATGGCGATGGACAACTTTTGGTGGACTCTCCCATGGAAGAGGTTTCCTTGGTGACAGAACATTCTTGAAAGAGAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599012.5 |
||
| CDS TCA 90 bp | TCTTGCACAAGTTGTTTAGACAGTGACCAGATCATGTTGCTGTCCTaGGTAAGCTGTCCTGTGTATAAGCAGGAGTCATTCTTTACACAG | + |
|
Preference number: 5 (lower is better) Translates to: SCTSCLDSDQIMLLS*VSCPVYKQESFFTQ Trigger: CTGTGTAAAGAATGACTCCTGCTTATACACAGGACAGCTTACTCAGGACAGCAACATGATCTGGTCACTGTCTAAACAACTTGTGCAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599328.1 |
||
| CDS CCA 90 bp | TCTGAGTTTCTTTCTCAGGTAAGTCAGTCATTCATTAAGAAGAAGTaGATCATCACAGTTCATCTTCCTCGCATCCTCCCCGAGGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: SEFLSQVSQSFIKKK*IITVHLPRILPEVI Trigger: TATGACCTCGGGGAGGATGCGAGGAAGATGAACTGTGATGATCCACTTCTTCTTAATGAATGACTGACTTACCTGAGAAAGAAACTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000594517.5 ENST00000594681.5 ENST00000595293.1 ENST00000598513.6 ENST00000598806.5 ENST00000599012.5 ENST00000601413.5 ENST00000601828.5 |
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| CDS-3UTR CAA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGTCCTTGAGGTCAAAATaGTTGATGCCATGGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRSLRSK*LMPWLS Trigger: GGAAAGCCATGGCATCAACAATTTTGACCTCAAGGA...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGGTGAGGTTCGAACTTTaGCTAAAAGCCTTTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRVRFEL*LKAFPQ Trigger: CTGTGGAAAGGCTTTTAGCAAAAGTTCGAACCTCAC...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGCCCACCCTACTCTTCTaGTTTCATGGTCATCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRPTLLF*FHGHLV Trigger: TACAAGATGACCATGAAACAAGAAGAGTAGGGTGGG...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS TCA 90 bp | GCTACTCTACTCAGTGGCTTCAAGAGGCACCTCTATGTAGCAGAATaGTACTGTGACAGATTAATTAATGTTCTCTTTCAAGAATGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ATLLSGFKRHLYVAE*YCDRLINVLFQECS Trigger: AGAACATTCTTGAAAGAGAACATTAATTAATCTGTCACAGTATCATTCTGCTACATAGAGGTGCCTCTTGAAGCCACTGAGTAGAGTAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGTTGAGGTCAAAATTGTaGATGCCATGGCTTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRLRSKL*MPWLSF Trigger: AAAGGAAAGCCATGGCATCAACAATTTTGACCTCAA...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGTTTTCCCAGACTTCCTaGAGGTCAAAATTGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRFSQTS*RSKLLM Trigger: CATCAACAATTTTGACCTCAAGGAAGTCTGGGAAAA...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGAAACACTTCACGTATTaGTTTCCGGCATACCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRKHFTY*FPAYLM Trigger: CATAAGGTATGCCGGAAACAAATACGTGAAGTGTTT...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGTGTTTCATGGTCATCTaGTACTGTAACCAATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRCFMVI*YCNQSL Trigger: GAGAGATTGGTTACAGTACAAGATGACCATGAAACA...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGTTTGGTGATAATCCCTaGCTTGTAAATCCAACAGAA | + |
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Preference number: 5 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRFGDNP*LVNPTE Trigger: TTCTGTTGGATTTACAAGCAAGGGATTATCACCAAA...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGTTCCTTATAAATGGCTaGTCATGGATGAAATACTGG | + |
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Preference number: 5 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRFLING*SWMKYW Trigger: CCAGTATTTCATCCATGACAAGCCATTTATAAGGAA...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS-3UTR CAA 90 bp | TTAGTGTTCTTGCTTTTTCCAGGTTTCAGTAATATAAAGAAGCCACACCTAAGGGATGATCTCCAAGGTTaGAACTTTGGAATAAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: LVFLLFPGFSNIKKPHLRDDLQG*NFGIKH Trigger: ATGCTTTATTCCAAAGTTCAAACCTTGGAGATCATC...CCTTAGGTGTGGCTTCTTTATATTACTGAAACCTGGAAAAAGCAAGAACACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333952.8 ENST00000598513.6 |
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| CDS CCA 90 bp | CCAAAGCATATACATAGAGTGAACCCCAACATCGACTATGGACTTTaGGTGATAATGATGTGTCAATGTAGGTTTATCAATTTTAACAAA | + |
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Preference number: 5 (lower is better) Translates to: PKHIHRVNPNIDYGL*VIMMCQCRFINFNK Trigger: TTTGTTAAAATTGATAAACCTACATTGACACATCATTATCACCCAAAGTCCATAGTCGATGTTGGGGTTCACTCTATGTATATGCTTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599328.1 |
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| CDS CCA 72 bp | CGACCCCAAAACCCGACAGCGGAGCGTGGGAACCTGTaGCCCGCGAGGCGCAGGCTTGAACCCGAAAGACGG | + |
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Preference number: 6 (lower is better) Translates to: RPQNPTAERGNL*PARRRLEPERR Trigger: CCGTCTTTCGGGTTCAAGCCTGCGCCTCGCGGGCCACAGGTTCCCACGCTCCGCTGTCGGGTTTTGGGGTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594681.5 |
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| CDS CAA 90 bp | TGGATCATCACAGTTCATCTTCCTCGCATCCTCCCCGAGGTCATATaGTGTGGGCCGAGAGCGCCAGTAGCCCCGCGAGATCCGCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: WIITVHLPRILPEVI*CGPRAPVAPRDPLP Trigger: CGGAAGCGGATCTCGCGGGGCTACTGGCGCTCTCGGCCCACACAATATGACCTCGGGGAGGATGCGAGGAAGATGAACTGTGATGATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000595293.1 ENST00000598513.6 ENST00000598806.5 |
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| CDS CCA 72 bp | GGCCAGTACCCACTTCAGAACGATTTTAATCCGAAATaGACGCAGATCTCTAGACCCTCTCGGAGCGACGGG | + |
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Preference number: 6 (lower is better) Translates to: GQYPLQNDFNPK*TQISRPSRSDG Trigger: CCCGTCGCTCCGAGAGGGTCTAGAGATCTGCGTCCATTTCGGATTAAAATCGTTCTGAAGTGGGTACTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000594681.5 ENST00000601413.5 |
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| CDS CCA 72 bp | GGGCTAAGATGCCATGTTCACAGCATTAAGCACCACTaGCCACCCAGGGCAGCACGGATTATAAATCACAGC | + |
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Preference number: 6 (lower is better) Translates to: GLRCHVHSIKHH*PPRAARIINHS Trigger: GCTGTGATTTATAATCCGTGCTGCCCTGGGTGGCCAGTGGTGCTTAATGCTGTGAACATGGCATCTTAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599328.1 |
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| CDS TCA 72 bp | GTAGGTCATGATAGCACCTTTGCTTTTGTGTCTGTATaGGTTGGGGCATCACGGGAGAGTGGGAGTTCAACC | + |
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Preference number: 6 (lower is better) Translates to: VGHDSTFAFVSV*VGASRESGSST Trigger: GGTTGAACTCCCACTCTCCCGTGATGCCCCAACTCATACAGACACAAAAGCAAAGGTGCTATCATGACCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593539.1 |
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| CDS GCA 72 bp | ATTCTAAGGAAGAGGCAGTGTGCTCTGTCCACAGGCTaGAAGGTGAGAACCATCTTCTGGAGGGATGTTATC | + |
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Preference number: 6 (lower is better) Translates to: ILRKRQCALSTG*KVRTIFWRDVI Trigger: GATAACATCCCTCCAGAAGATGGTTCTCACCTTGCAGCCTGTGGACAGAGCACACTGCCTCTTCCTTAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598806.5 |
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| CDS CCA 72 bp | CATATTGTGTGGGTTCAGAACGATTTTAATCCGAAATaGACGCAGATCTCTAGACCCTCTCGGAGCGACGGG | + |
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Preference number: 6 (lower is better) Translates to: HIVWVQNDFNPK*TQISRPSRSDG Trigger: CCCGTCGCTCCGAGAGGGTCTAGAGATCTGCGTCCATTTCGGATTAAAATCGTTCTGAACCCACACAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594517.5 |
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| CDS CAA 90 bp | GGGAGAGTGGGAGTTCAACCTTTTACACATTTGAATAACAGTATGTaGGGGGACAGTAGGAGCGGGTGTGGACCTTGCTTTGAGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: GRVGVQPFTHLNNSM*GDSRSGCGPCFESS Trigger: TGAGCTCTCAAAGCAAGGTCCACACCCGCTCCTACTGTCCCCCAACATACTGTTATTCAAATGTGTAAAAGGTTGAACTCCCACTCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593539.1 |
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| CDS CAA 72 bp | CATCACGGGAGAGTGGGAGTTCAACCTTTTACACATTaGAATAACAGTATGTTGGGGGACAGTAGGAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: HHGRVGVQPFTH*NNSMLGDSRSG Trigger: CCCGCTCCTACTGTCCCCCAACATACTGTTATTCAAATGTGTAAAAGGTTGAACTCCCACTCTCCCGTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593539.1 |
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| CDS CAA 90 bp | TGGATCATCACAGTTCATCTTCCTCGCATCCTCCCCGAGGTCATATaGTGTGGGTTCAGAACGATTTTAATCCGAAATGGACGCAGATCT | + |
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Preference number: 6 (lower is better) Translates to: WIITVHLPRILPEVI*CGFRTILIRNGRRS Trigger: AGATCTGCGTCCATTTCGGATTAAAATCGTTCTGAACCCACACAATATGACCTCGGGGAGGATGCGAGGAAGATGAACTGTGATGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594517.5 |
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| CDS TCA 72 bp | ACAATACTCAATGGAGTAGCTTACTCTGTGGCCATCTaGGCGCTTATTTGTGCTCACATTCCGACCTACCTG | + |
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Preference number: 6 (lower is better) Translates to: TILNGVAYSVAI*ALICAHIPTYL Trigger: CAGGTAGGTCGGAATGTGAGCACAAATAAGCGCTCAGATGGCCACAGAGTAAGCTACTCCATTGAGTATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593539.1 |
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| CDS TCA 72 bp | GGAAGAGGCAGTGTGCTCTGTCCACAGGCTGCAAGGTaGGAACCTAAAAGAATGAGATATATTCCCATTTTG | + |
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Preference number: 6 (lower is better) Translates to: GRGSVLCPQAAR*EPKRMRYIPIL Trigger: CAAAATGGGAATATATCTCATTCTTTTAGGTTCTCACCTTGCAGCCTGTGGACAGAGCACACTGCCTCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593539.1 |
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| CDS CCA 72 bp | TTCAAGAATGTTCTGTCACCAAGGAAACCTCTTCCATaGGAGAGTCCACCAAAAGTTGTCCATCGCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: FKNVLSPRKPLP*ESPPKVVHRHL Trigger: AAGATGGCGATGGACAACTTTTGGTGGACTCTCCCATGGAAGAGGTTTCCTTGGTGACAGAACATTCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS CAA 72 bp | GGAGTTCAACCTTTTACACATTTGAATAACAGTATGTaGGGGGACAGTAGGAGCGGGTGTGGACCTTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: GVQPFTHLNNSM*GDSRSGCGPCF Trigger: AAAGCAAGGTCCACACCCGCTCCTACTGTCCCCCAACATACTGTTATTCAAATGTGTAAAAGGTTGAACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593539.1 |
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| CDS TCA 72 bp | AGTTGTTTAGACAGTGACCAGATCATGTTGCTGTCCTaGGTAAGCTGTCCTGTGTATAAGCAGGAGTCATTC | + |
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Preference number: 6 (lower is better) Translates to: SCLDSDQIMLLS*VSCPVYKQESF Trigger: GAATGACTCCTGCTTATACACAGGACAGCTTACTCAGGACAGCAACATGATCTGGTCACTGTCTAAACAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599328.1 |
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| CDS CCA 72 bp | CTTTCTCAGGTAAGTCAGTCATTCATTAAGAAGAAGTaGATCATCACAGTTCATCTTCCTCGCATCCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LSQVSQSFIKKK*IITVHLPRILP Trigger: GGGGAGGATGCGAGGAAGATGAACTGTGATGATCCACTTCTTCTTAATGAATGACTGACTTACCTGAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000594517.5 ENST00000594681.5 ENST00000595293.1 ENST00000598513.6 ENST00000598806.5 ENST00000599012.5 ENST00000601413.5 ENST00000601828.5 |
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| CDS TCA 72 bp | TTAAGTCACCTTATCTTGCACAAGTTGTTTAGACAGTaGCCAGATCATGTTGCTGTCCTGAGTAAGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LSHLILHKLFRQ*PDHVAVLSKLS Trigger: GGACAGCTTACTCAGGACAGCAACATGATCTGGTCACTGTCTAAACAACTTGTGCAAGATAAGGTGACTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599328.1 |
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| CDS CAA 72 bp | GGCATATTTTCCCAGACTTCCTTGAGGTCAAAATTGTaGATGCCATGGCTTTCCTTTCTTTCTAATATCACC | + |
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Preference number: 6 (lower is better) Translates to: GIFSQTSLRSKL*MPWLSFLSNIT Trigger: GGTGATATTAGAAAGAAAGGAAAGCCATGGCATCAACAATTTTGACCTCAAGGAAGTCTGGGAAAATATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000333952.8 ENST00000594517.5 ENST00000598513.6 |
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| CDS TCA 72 bp | CTCAGTGGCTTCAAGAGGCACCTCTATGTAGCAGAATaGTACTGTGACAGATTAATTAATGTTCTCTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LSGFKRHLYVAE*YCDRLINVLFQ Trigger: TTGAAAGAGAACATTAATTAATCTGTCACAGTATCATTCTGCTACATAGAGGTGCCTCTTGAAGCCACTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599012.5 |
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| CDS CCA 72 bp | ATACATAGAGTGAACCCCAACATCGACTATGGACTTTaGGTGATAATGATGTGTCAATGTAGGTTTATCAAT | + |
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Preference number: 6 (lower is better) Translates to: IHRVNPNIDYGL*VIMMCQCRFIN Trigger: ATTGATAAACCTACATTGACACATCATTATCACCCAAAGTCCATAGTCGATGTTGGGGTTCACTCTATGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599328.1 |
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