RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF672 (Homo sapiens)

Ensembl gene IDs: ENSG00000171161

Ensembl transcript IDs: ENST00000306562.8, ENST00000423362.1, ENST00000428515.5, ENST00000502697.5, ENST00000505503.5, ENST00000510904.5, ENST00000515369.5

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACACAGGGGAGTCTAAGGGTTCCCTGACTCCCTGCACCTACACCTaGGGAGAGAATCCGAGTTATACGAGGACAGCATGGCAAAAGGGC +
Preference number: 1 (lower is better)
Translates to: HTGESKGSLTPCTYT*GENPSYTRTAWQKG
Trigger: GCCCTTTTGCCATGCTGTCCTCGTATAACTCGGATTCTCTCCTCAGGTGTAGGTGCAGGGAGTCAGGGAACCCTTAGACTCCCCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR TCA 90 bp CACCAACACCTGGGCTCTTGCACACAGGGGAGTCTAAGGGTTCCCTaGCTCCCTGCACCTACACCTGAGGAGAGAATCCGAGTTATACGA +
Preference number: 1 (lower is better)
Translates to: HQHLGSCTQGSLRVP*LPAPTPEERIRVIR
Trigger: TCGTATAACTCGGATTCTCTCCTCAGGTGTAGGTGCAGGGAGTCAGGGAACCCTTAGACTCCCCTGTGTGCAAGAGCCCAGGTGTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR GCA 90 bp GGTGGCTCCCATGATTTGGAAATAACCTCATGTTCCACTTGGCAGTaGCTGGCTTTGTGCACCCACATGGTTTTGGCCTGGGTCCCAGTG +
Preference number: 1 (lower is better)
Translates to: GGSHDLEITSCSTWQ*LALCTHMVLAWVPV
Trigger: CACTGGGACCCAGGCCAAAACCATGTGGGTGCACAAAGCCAGGCACTGCCAAGTGGAACATGAGGTTATTTCCAAATCATGGGAGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR TCA 90 bp CCAGGGTGCAGGCAGCTCCTAGCATGGAGACATCCTTCATGGAAGTaGGCTTTCCCACCCACCTCCATACCCACATTTCTCAGAAACAGA +
Preference number: 1 (lower is better)
Translates to: PGCRQLLAWRHPSWK*AFPPTSIPTFLRNR
Trigger: TCTGTTTCTGAGAAATGTGGGTATGGAGGTGGGTGGGAAAGCTCACTTCCATGAAGGATGTCTCCATGCTAGGAGCTGCCTGCACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR GCA 90 bp GATTTGGAAATAACCTCATGTTCCACTTGGCAGTGCCTGGCTTTGTaGACCCACATGGTTTTGGCCTGGGTCCCAGTGAAAATGGTCCTC +
Preference number: 1 (lower is better)
Translates to: DLEITSCSTWQCLAL*THMVLAWVPVKMVL
Trigger: GAGGACCATTTTCACTGGGACCCAGGCCAAAACCATGTGGGTGCACAAAGCCAGGCACTGCCAAGTGGAACATGAGGTTATTTCCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR TCA 90 bp GTCTTTTCCCAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTaGTACTATATAGGTGCTTGCCCAACCACCTTTAGAGAAGCCTCA +
Preference number: 1 (lower is better)
Translates to: VFSQISIYELPQLSP*YYIGACPTTFREAS
Trigger: TGAGGCTTCTCTAAAGGTGGTTGGGCAAGCACCTATATAGTATCACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTGGGAAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR TCA 90 bp CACAGGGCTGGTAACGTGCCTACAGCCAAATCTGTGACCATTACCTaGAGAGGCAGGACAACAAAAGTAATCAGGAAAGGAGAAGATGTG +
Preference number: 1 (lower is better)
Translates to: HRAGNVPTAKSVTIT*RGRTTKVIRKGEDV
Trigger: CACATCTTCTCCTTTCCTGATTACTTTTGTTGTCCTGCCTCTTCAGGTAATGGTCACAGATTTGGCTGTAGGCACGTTACCAGCCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR-3UTR TCA 90 bp CGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGACATCCTCCTCAACTGTCCCCGTaGTACTATATAGGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: RDWPPLPGCRQLLAWRHPPQLSP*YYIGAC
Trigger: GCAAGCACCTATATAGTATCACGGGGACAGTTGAGG...AGGATGTCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR-3UTR GCA 90 bp AGGAGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCTCTCCATCTACGAGTTaGCTCAACTGTCCCCGTGAT +
Preference number: 2 (lower is better)
Translates to: RRLREGLPTETGKVGGHISPSTS*LNCPRD
Trigger: ATCACGGGGACAGTTGAGGCAACTCGTAGATGGAGA...GATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR-3UTR GCA 90 bp GAGAGCACAGTAGCATTAAAGGGACACACCAACACCTGGGCTCTTGCACACAGGGGCTACGTGAAGGGCTaGCAACAGAAACTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: ESTVALKGHTNTWALAHRGYVKG*QQKLER
Trigger: CCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCC...CCTGTGTGCAAGAGCCCAGGTGTTGGTGTGTCCCTTTAATGCTACTGTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR-3UTR TCA 90 bp GAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGCCACAGGGCTGGTAACGTGAGTCTAAGGGTTCCCTaGCTCCCTGCACCTACACCT +
Preference number: 2 (lower is better)
Translates to: ETELTGNQESRSHRAGNVSLRVP*LPAPTP
Trigger: AGGTGTAGGTGCAGGGAGTCAGGGAACCCTTAGACT...CACGTTACCAGCCCTGTGGCTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR-3UTR CCA 90 bp GAGAGCACAGTAGCATTAAAGGGACACACCAACACCTGGGCTCTTGCACACAGGGCTGCCAACAGAAACTaGAAAGGTAGGAGGCCACAT +
Preference number: 2 (lower is better)
Translates to: ESTVALKGHTNTWALAHRAANRN*KGRRPH
Trigger: ATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGC...CCTGTGTGCAAGAGCCCAGGTGTTGGTGTGTCCCTTTAATGCTACTGTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR CAA 90 bp CATGATTTGGAAATAACCTCATGTTCCACTTGGCAGTGCCTGGCTTaGTGCACCCACATGGTTTTGGCCTGGGTCCCAGTGAAAATGGTC +
Preference number: 2 (lower is better)
Translates to: HDLEITSCSTWQCLA*CTHMVLAWVPVKMV
Trigger: GACCATTTTCACTGGGACCCAGGCCAAAACCATGTGGGTGCACAAAGCCAGGCACTGCCAAGTGGAACATGAGGTTATTTCCAAATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR-3UTR GCA 90 bp CTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGTCTTTTACTATATAGGTGCTTaGCCAACCACCTTTAGAGAA +
Preference number: 2 (lower is better)
Translates to: LREGLPTETGKVGGHIVFYYIGA*PTTFRE
Trigger: TTCTCTAAAGGTGGTTGGGCAAGCACCTATATAGTA...AAAGACGATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR-3UTR TCA 90 bp TCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGAGATGTGGGCTGGAATaGGATAGGACAAGAGAAGAC +
Preference number: 2 (lower is better)
Translates to: SIPTFLRNRVNREPRVKKRCGLE*DRTRED
Trigger: GTCTTCTCTTGTCCTATCTCATTCCAGCCCACATCT...CTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR TCA 72 bp CTGGGCTCTTGCACACAGGGGAGTCTAAGGGTTCCCTaGCTCCCTGCACCTACACCTGAGGAGAGAATCCGA +
Preference number: 3 (lower is better)
Translates to: LGSCTQGSLRVP*LPAPTPEERIR
Trigger: TCGGATTCTCTCCTCAGGTGTAGGTGCAGGGAGTCAGGGAACCCTTAGACTCCCCTGTGTGCAAGAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR TCA 72 bp GAGTCTAAGGGTTCCCTGACTCCCTGCACCTACACCTaGGGAGAGAATCCGAGTTATACGAGGACAGCATGG +
Preference number: 3 (lower is better)
Translates to: ESKGSLTPCTYT*GENPSYTRTAW
Trigger: CCATGCTGTCCTCGTATAACTCGGATTCTCTCCTCAGGTGTAGGTGCAGGGAGTCAGGGAACCCTTAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR TCA 72 bp AGGCAGCTCCTAGCATGGAGACATCCTTCATGGAAGTaGGCTTTCCCACCCACCTCCATACCCACATTTCTC +
Preference number: 3 (lower is better)
Translates to: RQLLAWRHPSWK*AFPPTSIPTFL
Trigger: GAGAAATGTGGGTATGGAGGTGGGTGGGAAAGCTCACTTCCATGAAGGATGTCTCCATGCTAGGAGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR GCA 72 bp ATAACCTCATGTTCCACTTGGCAGTGCCTGGCTTTGTaGACCCACATGGTTTTGGCCTGGGTCCCAGTGAAA +
Preference number: 3 (lower is better)
Translates to: ITSCSTWQCLAL*THMVLAWVPVK
Trigger: TTTCACTGGGACCCAGGCCAAAACCATGTGGGTGCACAAAGCCAGGCACTGCCAAGTGGAACATGAGGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR GCA 72 bp CATGATTTGGAAATAACCTCATGTTCCACTTGGCAGTaGCTGGCTTTGTGCACCCACATGGTTTTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: HDLEITSCSTWQ*LALCTHMVLAW
Trigger: CCAGGCCAAAACCATGTGGGTGCACAAAGCCAGGCACTGCCAAGTGGAACATGAGGTTATTTCCAAATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR TCA 72 bp CAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTaGTACTATATAGGTGCTTGCCCAACCACCTTTAGA +
Preference number: 3 (lower is better)
Translates to: QISIYELPQLSP*YYIGACPTTFR
Trigger: TCTAAAGGTGGTTGGGCAAGCACCTATATAGTATCACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR TCA 72 bp GGTAACGTGCCTACAGCCAAATCTGTGACCATTACCTaGAGAGGCAGGACAACAAAAGTAATCAGGAAAGGA +
Preference number: 3 (lower is better)
Translates to: GNVPTAKSVTIT*RGRTTKVIRKG
Trigger: TCCTTTCCTGATTACTTTTGTTGTCCTGCCTCTTCAGGTAATGGTCACAGATTTGGCTGTAGGCACGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGATCCCACTCAGCCGGCTaGCGACCCCCGCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRSHSAG*RPPPPG
Trigger: TCCGGGAGGCGGGGGTCGGCAGCCGGCTGAGTGGGA...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCACCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGTCCGGGACACGTGGATaGGCGCGTGACTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPSRDWPPLPGCRQLLAWSGTRG*ARDSAA
Trigger: GGCTGCGGAGTCACGCGCGCATCCACGTGTCCCGGA...CCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGACATCCTCGCGCAGCGGTGGGGTaGGGCAGCAGGGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RDWPPLPGCRQLLAWRHPRAAVG*GSRVRG
Trigger: ACCTCTGACCCTGCTGCCCCACCCCACCGCTGCGCG...AGGATGTCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCACCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGCTCTGGAGCTTCTGCTaGCCCACCACGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PPSRDWPPLPGCRQLLAWLWSFC*PTTLGR
Trigger: CCTGCCCAGCGTGGTGGGGCAGCAGAAGCTCCAGAG...CCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGAGGGCTCTGGAGCTTCTaGTGCCCCACCACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRGLWSF*CPTTLG
Trigger: GCCCAGCGTGGTGGGGCAGCAGAAGCTCCAGAGCCC...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGAAGACACGGGGTCGCGTaGGGCTCCGGGACACGTGGA +
Preference number: 4 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRRHGVA*GSGTRG
Trigger: TCCACGTGTCCCGGAGCCCCACGCGACCCCGTGTCT...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGACATCCTCTCTGCGCACTCCGCTaGCCGTTCGCCCAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: RDWPPLPGCRQLLAWRHPLCALR*PFAQVR
Trigger: ACGCACCTGGGCGAACGGCCAGCGGAGTGCGCAGAG...AGGATGTCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp TATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGACGTGGATGCGCGCGTaGCTCCGCAGCCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: YTRTAWQKGRQGSRCRGETWMRA*LRSPAP
Trigger: CGGCGCCGGGCTGCGGAGTCACGCGCGCATCCACGT...CTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCACCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGGTAAGGCTTCCCCGCTaGCACTGCCCCAGATGTGGC +
Preference number: 4 (lower is better)
Translates to: PPSRDWPPLPGCRQLLAWVRLPR*HCPRCG
Trigger: GCCACATCTGGGGCAGTGGCAGCGGGGAAGCCTTAC...CCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGACATCCTGCACTTGCCGCACTCTaGGCACTCCGCTGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: RDWPPLPGCRQLLAWRHPALAAL*ALRWPF
Trigger: GAACGGCCAGCGGAGTGCGCAGAGTGCGGCAAGTGC...AGGATGTCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGACATCCTCCGCACACGCCACACTaGTGGGCGTCTGAGACACGG +
Preference number: 4 (lower is better)
Translates to: RDWPPLPGCRQLLAWRHPPHTPH*WASETR
Trigger: CCGTGTCTCAGACGCCCACCAGTGTGGCGTGTGCGG...AGGATGTCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGAAGTGGCGCACGCATGTaGCCGCTCGCCCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRSGARM*PLALMA
Trigger: AGCCATCAGGGCGAGCGGCCACATGCGTGCGCCACT...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGACAAGTGCGGCATCGCTaGCGGTGTGCGCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRQVRHR*RCAPKC
Trigger: ACACTTGGGCGCACACCGGCAGCGATGCCGCACTTG...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGAGGTTGCTGGGAAGACTaGGAGGCCAGCGAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRGCWED*EASEQR
Trigger: ACGCTGCTCGCTGGCCTCCCAGTCTTCCCAGCAACC...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGAAACCCTTGCCGCAAGTaGCGCACGCATGTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRNPCRK*RTHVAA
Trigger: AGCGGCCACATGCGTGCGCCACTTGCGGCAAGGGTT...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGACATCCTGGCTTGTGGCCGGCATaGTTGCGCCGATGCACGTTG +
Preference number: 4 (lower is better)
Translates to: RDWPPLPGCRQLLAWRHPGLWPA*LRRCTL
Trigger: CAACGTGCATCGGCGCAACCATGCCGGCCACAAGCC...AGGATGTCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp CCACATCGTCTTTTCCCAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTGGGTCCGAGCGGTCGCTaGAGCGGCGGCCGCACTCGG +
Preference number: 4 (lower is better)
Translates to: PHRLFPNLHLRVASTVPVGPSGR*SGGRTR
Trigger: CCGAGTGCGGCCGCCGCTTCAGCGACCGCTCGGACC...CACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTGGGAAAAGACGATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp ATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGGGCTGCCCCACCACGCTaGGCAGGAGTAGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: IRGQHGKRADRVVGVEARAAPPR*AGVAAW
Trigger: CCATGCGGCTACTCCTGCCCAGCGTGGTGGGGCAGC...CCTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp CCACCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGTACAGGTTTGGCGCTTaGGTCCCAAGGCACGCTCTT +
Preference number: 4 (lower is better)
Translates to: PPSRDWPPLPGCRQLLAWYRFGA*VPRHAL
Trigger: AAGAGCGTGCCTTGGGACTCAAGCGCCAAACCTGTA...CCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp ATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGGAAACCGGTCGCCGACTaGCTCCTCAGACACCGCGCG +
Preference number: 4 (lower is better)
Translates to: IRGQHGKRADRVVGVEARKPVAD*LLRHRA
Trigger: CGCGCGGTGTCTGAGGAGGCAGTCGGCGACCGGTTT...CCTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp ATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGGTCTGGCCAGCATGCGTaGGCCTGTGCGCTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: IRGQHGKRADRVVGVEARSGQHA*ACALGG
Trigger: ACCTCCGAGCGCACAGGCGCACGCATGCTGGCCAGA...CCTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CGAGTTATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGGCCGCTCTGGCAGATaGTGGCGGCGCCGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: RVIRGQHGKRADRVVGVEGRSGR*WRRRCS
Trigger: GCTACACCGGCGCCGCCAGCATCTGCCAGAGCGGCC...CTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATAACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp TATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGCCACTGCGGACTGGATaGCAACGGCGGCAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: YTRTAWQKGRQGSRCRGEPLRTG*QRRQRC
Trigger: GCACCGCTGCCGCCGTTGCCATCCAGTCCGCAGTGG...CTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp AGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGTCGTGCCCACTGCGGACTaGATGGCAACGGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RLREGLPTETGKVGGHIVVPTAD*MATAAA
Trigger: CGCTGCCGCCGTTGCCATCCAGTCCGCAGTGGGCAC...GACGATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp GAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGCCACAGGGCTGGTAACGTGAGCGCCGGCCGCATGTaGGGCAGGGGCAAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: ETELTGNQESRSHRAGNVSAGRM*GRGKCG
Trigger: GCCGCACTTGCCCCTGCCGCACATGCGGCCGGCGCT...CACGTTACCAGCCCTGTGGCTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp TATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGGTGACTGGCCACCTCTaGCAGGGTGCAGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YTRTAWQKGRQGSRCRGEVTGHL*QGAGSS
Trigger: GGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCAC...CTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGATGTTCCACTTGGCAGTaGCTGGCTTTGTGCACCCAC +
Preference number: 4 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRCSTWQ*LALCTH
Trigger: GTGGGTGCACAAAGCCAGGCACTGCCAAGTGGAACA...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CGAGTTATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGTCCGGCCCCTCGGGATaGGGAGGTCACGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RVIRGQHGKRADRVVGVESGPSG*GGHAPV
Trigger: GACAGGAGCGTGACCTCCCCATCCCGAGGGGCCGGA...CTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATAACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGATACCTCACCCCATGCTaGAGCTCATCCCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRYLTPC*SSSHRQ
Trigger: TTGCCTGTGGGATGAGCTCCAGCATGGGGTGAGGTA...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGACATCCTGCTAGGGTACAGGTTTaGCGCTTGAGTCCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: RDWPPLPGCRQLLAWRHPARVQV*RLSPKA
Trigger: TGCCTTGGGACTCAAGCGCCAAACCTGTACCCTAGC...AGGATGTCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp GAGAGCACAGTAGCATTAAAGGGACACACCAACACCTGGGCTCTTGCACACAGGGGTGGCGCACCAGCGTaGCGCTCTCCAGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: ESTVALKGHTNTWALAHRGGAPA*RSPGSP
Trigger: AGGGCTTCCTGGAGAGCGCCACGCTGGTGCGCCACC...CCTGTGTGCAAGAGCCCAGGTGTTGGTGTGTCCCTTTAATGCTACTGTGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp ATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGGGACAGCGAGCGGCTGTaGCTGAAGCACTTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: IRGQHGKRADRVVGVEARDSERL*LKHLPH
Trigger: GTGCGGCAAGTGCTTCAGCCACAGCCGCTCGCTGTC...CCTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp GAGAGCACAGTAGCATTAAAGGGACACACCAACACCTGGGCTCTTGCACACAGGCTGCCCACCTTCACGTaGCTGGCCACCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ESTVALKGHTNTWALAHRLPTFT*LATSAR
Trigger: CCTGGCAGAGGTGGCCAGTCACGTGAAGGTGGGCAG...CCTGTGTGCAAGAGCCCAGGTGTTGGTGTGTCCCTTTAATGCTACTGTGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp AGGAGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGGCAGTGTCACCGGTTaGTGGGAAGACTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RRLREGLPTETGKVGGHIGSVTG*WEDWEA
Trigger: GGCCTCCCAGTCTTCCCAGCAACCGGTGACACTGCC...GATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp ACATCCTTCATGGAAGTGAGCTTTCCCACCCACCTCCATACCCACATTTCTCAGGCTCGCCCTGATGGCTaGGCCGATGGCGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: TSFMEVSFPTHLHTHISQARPDG*ADGAAA
Trigger: CGCTGCTGCGCCATCGGCGCAGCCATCAGGGCGAGC...CTGAGAAATGTGGGTATGGAGGTGGGTGGGAAAGCTCACTTCCATGAAGGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CGAGTTATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGGCCGTTCGCCCAGGTaGGTCTTGCGGTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: RVIRGQHGKRADRVVGVEGRSPR*VLRCSA
Trigger: TGCACTGCACCGCAAGACGCACCTGGGCGAACGGCC...CTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATAACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp ATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGGGGGTCACGCTTGAAGTaGAAACCGGTCGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: IRGQHGKRADRVVGVEARGSRLK*KPVADC
Trigger: GCAGTCGGCGACCGGTTTCCACTTCAAGCGTGACCC...CCTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGTCTTTCGCTCTGGCAGATGCTaGCGGCGCCGGTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LREGLPTETGKVGGHIVFRSGRC*RRRCSS
Trigger: GCTGCTACACCGGCGCCGCCAGCATCTGCCAGAGCG...AAAGACGATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CATCTACGAGTTGCCTCAACTGTCCCCGTGATACTATATAGGTGCTTGCCCAACCACTGCGCGCAGCGGTaGGGTGGGGCAGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: HLRVASTVPVILYRCLPNHCAQR*GGAAGS
Trigger: TGACCCTGCTGCCCCACCCCACCGCTGCGCGCAGTG...GTTGGGCAAGCACCTATATAGTATCACGGGGACAGTTGAGGCAACTCGTAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CCACATCGTCTTTTCCCAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTGGTGTGTGTGCGCTGGTaGCGCACCAGCGTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: PHRLFPNLHLRVASTVPVVCVRW*RTSVAL
Trigger: GAGCGCCACGCTGGTGCGCCACCAGCGCACACACAC...CACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTGGGAAAAGACGATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp ACATCCTTCATGGAAGTGAGCTTTCCCACCCACCTCCATACCCACATTTCTCAGACACTGGTGGGCGTCTaGGACACGGGGTCGCGTGGG +
Preference number: 4 (lower is better)
Translates to: TSFMEVSFPTHLHTHISQTLVGV*DTGSRG
Trigger: CCCACGCGACCCCGTGTCTCAGACGCCCACCAGTGT...CTGAGAAATGTGGGTATGGAGGTGGGTGGGAAAGCTCACTTCCATGAAGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp CGAGTTATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGTGGAACTCTCGCTaGAGCAGCGTCCACAGTCGC +
Preference number: 4 (lower is better)
Translates to: RVIRGQHGKRADRVVGVEAWNSR*SSVHSR
Trigger: GCGACTGTGGACGCTGCTTCAGCGAGAGTTCCACGC...CTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATAACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp CCACATCGTCTTTTCCCAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTGGCGAGCGGCTGTGGCTaGAGCACTTGCCGCACTCTG +
Preference number: 4 (lower is better)
Translates to: PHRLFPNLHLRVASTVPVASGCG*STCRTL
Trigger: CAGAGTGCGGCAAGTGCTTCAGCCACAGCCGCTCGC...CACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTGGGAAAAGACGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp TCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGCCACAGGGCTGGTAACCGCGTGTGGGCCCGCTaGTGCTGTGACAGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: SETELTGNQESRSHRAGNRVWAR*CCDSER
Trigger: CCGCTCGCTGTCACAGCATCAGCGGGCCCACACGCG...GTTACCAGCCCTGTGGCTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp AGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGTCTGGCCTGGGTCCCAGTaGAAATGGTCCTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: RLREGLPTETGKVGGHIVWPGSQ*KWSSPG
Trigger: GCCAGGTGAGGACCATTTTCACTGGGACCCAGGCCA...GACGATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGAGATGTCCTCCTCTTGTaGCTCTGGAGTAAGATGTGC +
Preference number: 4 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRDVLLL*LWSKMC
Trigger: GCACATCTTACTCCAGAGGCACAAGAGGAGGACATC...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCACATCGTCTTTTCCCAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTGGAGGGCAGTGCCCACTaGGGACTGGATGGCAACGGC +
Preference number: 4 (lower is better)
Translates to: PHRLFPNLHLRVASTVPVEGSAH*GLDGNG
Trigger: GCCGTTGCCATCCAGTCCGCAGTGGGCACTGCCCTC...CACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTGGGAAAAGACGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGAGCTGCCAACAGAAACTaGAAAGGTAGGAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRAANRN*KGRRPH
Trigger: ATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGC...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGACATCCTCACATGGTTTTGGCCTaGGTCCCAGTGAAAATGGTC +
Preference number: 4 (lower is better)
Translates to: RDWPPLPGCRQLLAWRHPHMVLA*VPVKMV
Trigger: GACCATTTTCACTGGGACCCAGGCCAAAACCATGTG...AGGATGTCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp GAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGCCACAGGGCTGGTAACGTGGCTTGGAGGCGACGCTaGAGGCCTTGCTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: ETELTGNQESRSHRAGNVAWRRR*RPCCTR
Trigger: CCGAGTGCAGCAAGGCCTTCAGCGTCGCCTCCAAGC...CACGTTACCAGCCCTGTGGCTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGATGCTGGTGGCTCCCATaGTTTGGAAATAACCTCATG +
Preference number: 4 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRCWWLP*FGNNLM
Trigger: CATGAGGTTATTTCCAAATCATGGGAGCCACCAGCA...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CGAGTTATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGTGGCCAGGTTCACCCTaGACCGTGAGCCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: RVIRGQHGKRADRVVGVEWPGSP*TVSLQV
Trigger: GACTTGCAGGCTCACGGTGCAGGGTGAACCTGGCCA...CTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGTCTTTGAGGTCAGCAGCCCGTaGACAGCGCTCACCGCATTC +
Preference number: 4 (lower is better)
Translates to: LREGLPTETGKVGGHIVFEVSSP*TALTAF
Trigger: GAATGCGGTGAGCGCTGTGCACGGGCTGCTGACCTC...AAAGACGATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp GAGAGCACAGTAGCATTAAAGGGACACACCAACACCTGGGCTCTTGCACACAGGGGGGATTTTCCATCCTaGCCTCTCCCTGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ESTVALKGHTNTWALAHRGDFPS*PLPAGG
Trigger: GCCACCAGCAGGGAGAGGGCAGGATGGAAAATCCCC...CCTGTGTGCAAGAGCCCAGGTGTTGGTGTGTCCCTTTAATGCTACTGTGCTCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CCTCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGACCCGGACTGCGGGACTaGGGCGGGGGAGCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PPYPHFSETELTGNQESRPGLRD*GGGARK
Trigger: CTTCCTCGCTCCCCCGCCCCAGTCCCGCAGTCCGGG...TCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CGAGTTATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGTTCCAGGGTGAGCTGTaGCCAGGTTCACCCTGCACC +
Preference number: 4 (lower is better)
Translates to: RVIRGQHGKRADRVVGVEFQGEL*PGSPCT
Trigger: GGTGCAGGGTGAACCTGGCCACAGCTCACCCTGGAA...CTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGACATCCTGGAGGCCGCAAAAACTaGTCTGATTTCAGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: RDWPPLPGCRQLLAWRHPGGRKN*SDFRVL
Trigger: AAGAACCCTGAAATCAGACCAGTTTTTGCGGCCTCC...AGGATGTCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp AGGAGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGGACACACCAACACCTaGGCTCTTGCACACAGGGGA +
Preference number: 4 (lower is better)
Translates to: RRLREGLPTETGKVGGHIGHTNT*ALAHRG
Trigger: TCCCCTGTGTGCAAGAGCCCAGGTGTTGGTGTGTCC...GATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CCACATCGTCTTTTCCCAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTGCCACCTTCACGTGACTaGCCACCTCTGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PHRLFPNLHLRVASTVPVPPSRD*PPLPGC
Trigger: GCACCCTGGCAGAGGTGGCCAGTCACGTGAAGGTGG...CACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTGGGAAAAGACGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp ATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGGATGTGGCAAACATGGTaGGGACGGGTTCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: IRGQHGKRADRVVGVEARMWQTW*GRVHRE
Trigger: TTCCCTGTGAACCCGTCCTCACCATGTTTGCCACAT...CCTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp AGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGTCAGTCTAAGGGTTCCCTaGCTCCCTGCACCTACACCT +
Preference number: 4 (lower is better)
Translates to: RLREGLPTETGKVGGHIVSLRVP*LPAPTP
Trigger: AGGTGTAGGTGCAGGGAGTCAGGGAACCCTTAGACT...GACGATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGATCTGTGACCATTACCTaGAGAGGCAGGACAACAAAA +
Preference number: 4 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRSVTIT*RGRTTK
Trigger: TTTTGTTGTCCTGCCTCTTCAGGTAATGGTCACAGA...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp TATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGCATCCTTCATGGAAGTaGGCTTTCCCACCCACCTCC +
Preference number: 4 (lower is better)
Translates to: YTRTAWQKGRQGSRCRGEHPSWK*AFPPTS
Trigger: GGAGGTGGGTGGGAAAGCTCACTTCCATGAAGGATG...CTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp TATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGTCTTGCCACATTCGCTaGACGAGTAAGGCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: YTRTAWQKGRQGSRCRGESCHIR*TSKASP
Trigger: CGGGGAAGCCTTACTCGTGCAGCGAATGTGGCAAGA...CTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp TGTGACCATTACCTGAAGAGGCAGGACAACAAAAGTAATCAGGAAAGGAGAAGAAAGGCTCGCGGGCACTaGGCGCAGCGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CDHYLKRQDNKSNQERRRKARGH*AQRWGG
Trigger: CCCACCCCACCGCTGCGCGCAGTGCCCGCGAGCCTT...TCTTCTCCTTTCCTGATTACTTTTGTTGTCCTGCCTCTTCAGGTAATGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp TATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGGCATGGTTGCGCCGATaGACGTTGAGATTGGACACG +
Preference number: 4 (lower is better)
Translates to: YTRTAWQKGRQGSRCRGEAWLRR*TLRLDT
Trigger: CGTGTCCAATCTCAACGTGCATCGGCGCAACCATGC...CTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCACATCGTCTTTTCCCAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTGCGTCTTGCGGTGCAGTaGAAGCTTGGAGGCGACGCT +
Preference number: 4 (lower is better)
Translates to: PHRLFPNLHLRVASTVPVRLAVQ*KLGGDA
Trigger: AGCGTCGCCTCCAAGCTTGCACTGCACCGCAAGACG...CACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTGGGAAAAGACGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp GAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGCCACAGGGCTGGTAACGTGCGCCCAGGTGCGTCTTaGGGTGCAGTGCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ETELTGNQESRSHRAGNVRPGAS*GAVQAW
Trigger: CCAAGCTTGCACTGCACCGCAAGACGCACCTGGGCG...CACGTTACCAGCCCTGTGGCTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CCACATCGTCTTTTCCCAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTGTCAAGACGGCCGCTGTaGCGGAAGCTTTGTCCGCAC +
Preference number: 4 (lower is better)
Translates to: PHRLFPNLHLRVASTVPVSRRPL*RKLCPH
Trigger: GTGCGGACAAAGCTTCCGCCACAGCGGCCGTCTTGA...CACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTGGGAAAAGACGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CGAGTTATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGCTCGGGGCATTTGTGTaGCTTGTGGCCGGCATGGTT +
Preference number: 4 (lower is better)
Translates to: RVIRGQHGKRADRVVGVELGAFV*LVAGMV
Trigger: AACCATGCCGGCCACAAGCCACACAAATGCCCCGAG...CTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CCACATCGTCTTTTCCCAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTGCCCCTTGATCTGCCCTaGGGACATGTGTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: PHRLFPNLHLRVASTVPVPLDLP*GHVWPC
Trigger: GCATGGCCACACATGTCCCCAGGGCAGATCAAGGGG...CACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTGGGAAAAGACGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp CCACATCGTCTTTTCCCAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTGCAAAAGGGTCACGCTTaGAGTGGAAACCGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: PHRLFPNLHLRVASTVPVQKGHA*SGNRSP
Trigger: CGGCGACCGGTTTCCACTTCAAGCGTGACCCTTTTG...CACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTGGGAAAAGACGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp TATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGATGTCGCAGCAGCACTaGGCTGTAGCAGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: YTRTAWQKGRQGSRCRGEMSQQH*AVAEAL
Trigger: AAGAGCTTCTGCTACAGCTCAGTGCTGCTGCGACAT...CTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp CCTCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGACGGCCGTCACCGCCGTaGGCTCGTTCATGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: PPYPHFSETELTGNQESRRPSPP*ARSCRS
Trigger: GCTGCGACATGAACGAGCTCACGGCGGTGACGGCCG...TCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGTCTTTGTTCACAGGGAAGCGTaGCACTCACACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LREGLPTETGKVGGHIVFVHREA*HSHSGV
Trigger: GACCCCAGAGTGTGAGTGGCACGCTTCCCTGTGAAC...AAAGACGATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCTCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGGGTCTGGCCAGCATaGGTGCGCCTGTGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: PPYPHFSETELTGNQESRRVWPA*VRLCAR
Trigger: CCGAGCGCACAGGCGCACGCATGCTGGCCAGACCCT...TCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCTCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGATGCGGCAGGGGCAAGTaGGGCATCGCTGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: PPYPHFSETELTGNQESRCGRGK*GIAAGV
Trigger: CACACCGGCAGCGATGCCGCACTTGCCCCTGCCGCA...TCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp TCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGCCACAGGGCTGGTAACGGTTTCTCCCCCGAGTaGGTCTGCAGGTGTCGCGTC +
Preference number: 4 (lower is better)
Translates to: SETELTGNQESRSHRAGNGFSPE*VCRCRV
Trigger: GACGCGACACCTGCAGACGCACTCGGGGGAGAAACC...GTTACCAGCCCTGTGGCTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CATCTACGAGTTGCCTCAACTGTCCCCGTGATACTATATAGGTGCTTGCCCAACCAAAGACGAGGGCAGTaGCCACTGCGGACTGGATGG +
Preference number: 4 (lower is better)
Translates to: HLRVASTVPVILYRCLPNQRRGQ*PLRTGW
Trigger: CCATCCAGTCCGCAGTGGGCACTGCCCTCGTCTTTG...GTTGGGCAAGCACCTATATAGTATCACGGGGACAGTTGAGGCAACTCGTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCACCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGTACTATATAGGTGCTTaGCCAACCACCTTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: PPSRDWPPLPGCRQLLAWYYIGA*PTTFRE
Trigger: TTCTCTAAAGGTGGTTGGGCAAGCACCTATATAGTA...CCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp AGGAGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGGCTACGTGAAGGGCTaGCAACAGAAACTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RRLREGLPTETGKVGGHIGYVKG*QQKLER
Trigger: CCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCC...GATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp GAGAGCACAGTAGCATTAAAGGGACACACCAACACCTGGGCTCTTGCACACAGGCAACACCTGGGCTCTTaGACACAGGGGAGTCTAAGG +
Preference number: 4 (lower is better)
Translates to: ESTVALKGHTNTWALAHRQHLGS*TQGSLR
Trigger: CCTTAGACTCCCCTGTGTGCAAGAGCCCAGGTGTTG...CCTGTGTGCAAGAGCCCAGGTGTTGGTGTGTCCCTTTAATGCTACTGTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CCACATCGTCTTTTCCCAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTGGCAGGAGTAGCCGCATaGGATGTCCTCCTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PHRLFPNLHLRVASTVPVAGVAA*DVLLLC
Trigger: GCACAAGAGGAGGACATCCCATGCGGCTACTCCTGC...CACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTGGGAAAAGACGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CATCTACGAGTTGCCTCAACTGTCCCCGTGATACTATATAGGTGCTTGCCCAACGTGCCACTCACACTCTaGGGTCCACCTCCTGACGCT +
Preference number: 4 (lower is better)
Translates to: HLRVASTVPVILYRCLPNVPLTL*GPPPDA
Trigger: AGCGTCAGGAGGTGGACCCCAGAGTGTGAGTGGCAC...GTTGGGCAAGCACCTATATAGTATCACGGGGACAGTTGAGGCAACTCGTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
3UTR CAA 72 bp GAAATAACCTCATGTTCCACTTGGCAGTGCCTGGCTTaGTGCACCCACATGGTTTTGGCCTGGGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: EITSCSTWQCLA*CTHMVLAWVPV
Trigger: CACTGGGACCCAGGCCAAAACCATGTGGGTGCACAAAGCCAGGCACTGCCAAGTGGAACATGAGGTTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp TCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGGGCCCGCTGATGCTGTaGCAGCGAGCGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SIPTFLRNRVNREPRVKKGPLML*QRAAVA
Trigger: AGCCACAGCCGCTCGCTGTCACAGCATCAGCGGGCC...CTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp TATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGTCCTTCCATTACGGATaGGGAGTAGGACACTCGCTA +
Preference number: 4 (lower is better)
Translates to: YTRTAWQKGRQGSRCRGESFHYG*GVGHSL
Trigger: TAGCGAGTGTCCTACTCCGCATCCGTAATGGAAGGA...CTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp TCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGGCATGCGTGCGCCTGTaGGCTCGGAGGTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SIPTFLRNRVNREPRVKKACVRL*ARRSAA
Trigger: GGCTGCTGACCTCCGAGCGCACAGGCGCACGCATGC...CTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp GAGAGCACAGTAGCATTAAAGGGACACACCAACACCTGGGCTCTTGCACACAGGTATACGAGGACAGCATaGCAAAAGGGCCGACAGGGT +
Preference number: 4 (lower is better)
Translates to: ESTVALKGHTNTWALAHRYTRTA*QKGRQG
Trigger: ACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATA...CCTGTGTGCAAGAGCCCAGGTGTTGGTGTGTCCCTTTAATGCTACTGTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp GAGAGCACAGTAGCATTAAAGGGACACACCAACACCTGGGCTCTTGCACACAGGACCTCATGTTCCACTTaGCAGTGCCTGGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: ESTVALKGHTNTWALAHRTSCST*QCLALC
Trigger: GCACAAAGCCAGGCACTGCCAAGTGGAACATGAGGT...CCTGTGTGCAAGAGCCCAGGTGTTGGTGTGTCCCTTTAATGCTACTGTGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp ACATCCTTCATGGAAGTGAGCTTTCCCACCCACCTCCATACCCACATTTCTCAGTCTTGCCAAAGCACTTaGCGCACACGCCACACTGGT +
Preference number: 4 (lower is better)
Translates to: TSFMEVSFPTHLHTHISQSCQST*RTRHTG
Trigger: ACCAGTGTGGCGTGTGCGGCAAGTGCTTTGGCAAGA...CTGAGAAATGTGGGTATGGAGGTGGGTGGGAAAGCTCACTTCCATGAAGGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCTCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAGCTGCCCGAAACCCTTaGCGCAAGTGGCGCACGCAT +
Preference number: 4 (lower is better)
Translates to: PPYPHFSETELTGNQESRAARNP*RKWRTH
Trigger: ATGCGTGCGCCACTTGCGGCAAGGGTTTCGGGCAGC...TCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp ACATCCTTCATGGAAGTGAGCTTTCCCACCCACCTCCATACCCACATTTCTCAGAAGGGGCAGACATTGTaGCTGTTCCAGGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: TSFMEVSFPTHLHTHISQKGQTL*LFQGEL
Trigger: CAGCTCACCCTGGAACAGCCACAATGTCTGCCCCTT...CTGAGAAATGTGGGTATGGAGGTGGGTGGGAAAGCTCACTTCCATGAAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CCTCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGACACACGCCACACTGGTaGGCGTCTGAGACACGGGGT +
Preference number: 4 (lower is better)
Translates to: PPYPHFSETELTGNQESRHTPHW*ASETRG
Trigger: ACCCCGTGTCTCAGACGCCCACCAGTGTGGCGTGTG...TCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp ACATCCTTCATGGAAGTGAGCTTTCCCACCCACCTCCATACCCACATTTCTCAGCCCTGCACCTACACCTaGGGAGAGAATCCGAGTTAT +
Preference number: 4 (lower is better)
Translates to: TSFMEVSFPTHLHTHISQPCTYT*GENPSY
Trigger: ATAACTCGGATTCTCTCCTCAGGTGTAGGTGCAGGG...CTGAGAAATGTGGGTATGGAGGTGGGTGGGAAAGCTCACTTCCATGAAGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp TCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGTCCCCCGAGTGCGTCTaGAGGTGTCGCGTCAGCGTA +
Preference number: 4 (lower is better)
Translates to: SIPTFLRNRVNREPRVKKSPECV*RCRVSV
Trigger: TACGCTGACGCGACACCTGCAGACGCACTCGGGGGA...CTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCTCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGGTGCGTCTTGCGGTaGAGTGCAAGCTTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: PPYPHFSETELTGNQESRRCVLR*SASLEA
Trigger: CGCCTCCAAGCTTGCACTGCACCGCAAGACGCACCT...TCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp CCTCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAGATTGGACACGCACGTaGACCGCTTGCCGCACAGTT +
Preference number: 4 (lower is better)
Translates to: PPYPHFSETELTGNQESRDWTRT*TACRTV
Trigger: AACTGTGCGGCAAGCGGTTCACGTGCGTGTCCAATC...TCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp GAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGCCACAGGGCTGGTAACGTGCCTCAACTGTCCCCGTaGTACTATATAGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: ETELTGNQESRSHRAGNVPQLSP*YYIGAC
Trigger: GCAAGCACCTATATAGTATCACGGGGACAGTTGAGG...CACGTTACCAGCCCTGTGGCTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CCTCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGACTTCCCCGCTGCCACTaGCCCAGATGTGGCAAACAT +
Preference number: 4 (lower is better)
Translates to: PPYPHFSETELTGNQESRLPRCH*PRCGKH
Trigger: ATGTTTGCCACATCTGGGGCAGTGGCAGCGGGGAAG...TCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp CATCTACGAGTTGCCTCAACTGTCCCCGTGATACTATATAGGTGCTTGCCCAACTCTCCATCTACGAGTTaGCTCAACTGTCCCCGTGAT +
Preference number: 4 (lower is better)
Translates to: HLRVASTVPVILYRCLPNSPSTS*LNCPRD
Trigger: ATCACGGGGACAGTTGAGGCAACTCGTAGATGGAGA...GTTGGGCAAGCACCTATATAGTATCACGGGGACAGTTGAGGCAACTCGTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp CATCTACGAGTTGCCTCAACTGTCCCCGTGATACTATATAGGTGCTTGCCCAACAGGCAGCTCCTAGCATaGAGACATCCTTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: HLRVASTVPVILYRCLPNRQLLA*RHPSWK
Trigger: CTTCCATGAAGGATGTCTCCATGCTAGGAGCTGCCT...GTTGGGCAAGCACCTATATAGTATCACGGGGACAGTTGAGGCAACTCGTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR TCA 90 bp GAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGCCACAGGGCTGGTAACGTGAGATGTGGGCTGGAATaGGATAGGACAAGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: ETELTGNQESRSHRAGNVRCGLE*DRTRED
Trigger: GTCTTCTCTTGTCCTATCTCATTCCAGCCCACATCT...CACGTTACCAGCCCTGTGGCTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp TCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGCCACAGGGCTGGTAACAAAATGGTCCTCACCTaGCTGGGGAACATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SETELTGNQESRSHRAGNKMVLT*LGNMVL
Trigger: CAGAACCATGTTCCCCAGCCAGGTGAGGACCATTTT...GTTACCAGCCCTGTGGCTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp TCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGCAGTGCCTGGCTTTGTaGACCCACATGGTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: SIPTFLRNRVNREPRVKKQCLAL*THMVLA
Trigger: GGCCAAAACCATGTGGGTGCACAAAGCCAGGCACTG...CTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp ACATCCTTCATGGAAGTGAGCTTTCCCACCCACCTCCATACCCACATTTCTCAGACTTCTCTTAAGGCCTaGAAAGGGCACTGTAACAGA +
Preference number: 4 (lower is better)
Translates to: TSFMEVSFPTHLHTHISQTSLKA*KGHCNR
Trigger: TCTGTTACAGTGCCCTTTCCAGGCCTTAAGAGAAGT...CTGAGAAATGTGGGTATGGAGGTGGGTGGGAAAGCTCACTTCCATGAAGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp TCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGGGACACAGAGAACCCTaGCTTTTCCTGTTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SIPTFLRNRVNREPRVKKGHREP*LFLFSR
Trigger: CCGGCTGAACAGGAAAAGCCAGGGTTCTCTGTGTCC...CTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp ACATCCTTCATGGAAGTGAGCTTTCCCACCCACCTCCATACCCACATTTCTCAGCTCTGGAGTAAGATGTaGATTTCCTTCCATTACGGA +
Preference number: 4 (lower is better)
Translates to: TSFMEVSFPTHLHTHISQLWSKM*ISFHYG
Trigger: TCCGTAATGGAAGGAAATGCACATCTTACTCCAGAG...CTGAGAAATGTGGGTATGGAGGTGGGTGGGAAAGCTCACTTCCATGAAGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp TCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGTTTGTCCGCACTCACTaGAGATGTAGAGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SIPTFLRNRVNREPRVKKFVRTH*RCRGSG
Trigger: GCCAGACCCTCTACATCTGCAGTGAGTGCGGACAAA...CTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR GCA 90 bp TCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGTGTAGCAGAAGCTCTTaGCACATTCGCTGCACGAGT +
Preference number: 4 (lower is better)
Translates to: SIPTFLRNRVNREPRVKKCSRSS*HIRCTS
Trigger: ACTCGTGCAGCGAATGTGGCAAGAGCTTCTGCTACA...CTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CCA 90 bp TGTGACCATTACCTGAAGAGGCAGGACAACAAAAGTAATCAGGAAAGGAGAAGACTCCTCTTGTGCCTCTaGAGTAAGATGTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: CDHYLKRQDNKSNQERRRLLLCL*SKMCIS
Trigger: GGAAATGCACATCTTACTCCAGAGGCACAAGAGGAG...TCTTCTCCTTTCCTGATTACTTTTGTTGTCCTGCCTCTTCAGGTAATGGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS TCA 90 bp GAGACACGGGGTCGCGTGGGGCTCCGGGACACGTGGATGCGCGCGTaGCTCCGCAGCCCGGCGCCGCTTCGGAAGGCTCGCGGGCACTGC +
Preference number: 5 (lower is better)
Translates to: ETRGRVGLRDTWMRA*LRSPAPLRKARGHC
Trigger: GCAGTGCCCGCGAGCCTTCCGAAGCGGCGCCGGGCTGCGGAGTCACGCGCGCATCCACGTGTCCCGGAGCCCCACGCGACCCCGTGTCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 90 bp GGGCGTCTGAGACACGGGGTCGCGTGGGGCTCCGGGACACGTGGATaGGCGCGTGACTCCGCAGCCCGGCGCCGCTTCGGAAGGCTCGCG +
Preference number: 5 (lower is better)
Translates to: GRLRHGVAWGSGTRG*ARDSAARRRFGRLA
Trigger: CGCGAGCCTTCCGAAGCGGCGCCGGGCTGCGGAGTCACGCGCGCATCCACGTGTCCCGGAGCCCCACGCGACCCCGTGTCTCAGACGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 90 bp GGTGTAGCAGCAGCGCCGGGAGGTGCGGGAAGCGCCGGCCGCATGTaGGGCAGGGGCAAGTGCGGCATCGCTGCCGGTGTGCGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: GVAAAPGGAGSAGRM*GRGKCGIAAGVRPS
Trigger: ACTTGGGCGCACACCGGCAGCGATGCCGCACTTGCCCCTGCCGCACATGCGGCCGGCGCTTCCCGCACCTCCCGGCGCTGCTGCTACACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CCA 90 bp TGCCGCACACGCCACACTGGTGGGCGTCTGAGACACGGGGTCGCGTaGGGCTCCGGGACACGTGGATGCGCGCGTGACTCCGCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: CRTRHTGGRLRHGVA*GSGTRGCARDSAAR
Trigger: CCGGGCTGCGGAGTCACGCGCGCATCCACGTGTCCCGGAGCCCCACGCGACCCCGTGTCTCAGACGCCCACCAGTGTGGCGTGTGCGGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CCA 90 bp CAGCCGGCCCCTCAAAGACGAGGGCAGTGCCCACTGCGGACTGGATaGCAACGGCGGCAGCGGTGCGGGCGCGCGTGTGGGCCCGCTGAT +
Preference number: 5 (lower is better)
Translates to: QPAPQRRGQCPLRTG*QRRQRCGRACGPAD
Trigger: ATCAGCGGGCCCACACGCGCGCCCGCACCGCTGCCGCCGTTGCCATCCAGTCCGCAGTGGGCACTGCCCTCGTCTTTGAGGGGCCGGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CCA 90 bp TGTTCAGCCGGCCCCTCAAAGACGAGGGCAGTGCCCACTGCGGACTaGATGGCAACGGCGGCAGCGGTGCGGGCGCGCGTGTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: CSAGPSKTRAVPTAD*MATAAAVRARVWAR
Trigger: GCGGGCCCACACGCGCGCCCGCACCGCTGCCGCCGTTGCCATCCAGTCCGCAGTGGGCACTGCCCTCGTCTTTGAGGGGCCGGCTGAACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 90 bp CCGGGAGGTGCGGGAAGCGCCGGCCGCATGTGCGGCAGGGGCAAGTaGGGCATCGCTGCCGGTGTGCGCCCAAGTGTAGGTCAAGACGGC +
Preference number: 5 (lower is better)
Translates to: PGGAGSAGRMCGRGK*GIAAGVRPSVGQDG
Trigger: GCCGTCTTGACCTACACTTGGGCGCACACCGGCAGCGATGCCGCACTTGCCCCTGCCGCACATGCGGCCGGCGCTTCCCGCACCTCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS TCA 90 bp TGGATGGCAACGGCGGCAGCGGTGCGGGCGCGCGTGTGGGCCCGCTaGTGCTGTGACAGCGAGCGGCTGTGGCTGAAGCACTTGCCGCAC +
Preference number: 5 (lower is better)
Translates to: WMATAAAVRARVWAR*CCDSERLWLKHLPH
Trigger: GTGCGGCAAGTGCTTCAGCCACAGCCGCTCGCTGTCACAGCATCAGCGGGCCCACACGCGCGCCCGCACCGCTGCCGCCGTTGCCATCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS TCA 90 bp GCTCTTGCCAAAGCACTTGCCGCACACGCCACACTGGTGGGCGTCTaGGACACGGGGTCGCGTGGGGCTCCGGGACACGTGGATGCGCGC +
Preference number: 5 (lower is better)
Translates to: ALAKALAAHATLVGV*DTGSRGAPGHVDAR
Trigger: GCGCGCATCCACGTGTCCCGGAGCCCCACGCGACCCCGTGTCTCAGACGCCCACCAGTGTGGCGTGTGCGGCAAGTGCTTTGGCAAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 90 bp CTTTTCCTGTTCAGCCGGCCCCTCAAAGACGAGGGCAGTGCCCACTaGGGACTGGATGGCAACGGCGGCAGCGGTGCGGGCGCGCGTGTG +
Preference number: 5 (lower is better)
Translates to: LFLFSRPLKDEGSAH*GLDGNGGSGAGARV
Trigger: CACACGCGCGCCCGCACCGCTGCCGCCGTTGCCATCCAGTCCGCAGTGGGCACTGCCCTCGTCTTTGAGGGGCCGGCTGAACAGGAAAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 90 bp ACCCTGGCTTTTCCTGTTCAGCCGGCCCCTCAAAGACGAGGGCAGTaGCCACTGCGGACTGGATGGCAACGGCGGCAGCGGTGCGGGCGC +
Preference number: 5 (lower is better)
Translates to: TLAFPVQPAPQRRGQ*PLRTGWQRRQRCGR
Trigger: GCGCCCGCACCGCTGCCGCCGTTGCCATCCAGTCCGCAGTGGGCACTGCCCTCGTCTTTGAGGGGCCGGCTGAACAGGAAAAGCCAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 90 bp CCCGCGTCGGCTAGTGGTCAGTCTGGCGCGGGCAGTGTCACCGGTTaGTGGGAAGACTGGGAGGCCAGCGAGCAGCGTACCAACCACTCA +
Preference number: 5 (lower is better)
Translates to: PASASGQSGAGSVTG*WEDWEASEQRTNHS
Trigger: TGAGTGGTTGGTACGCTGCTCGCTGGCCTCCCAGTCTTCCCAGCAACCGGTGACACTGCCCGCGCCAGACTGACCACTAGCCGACGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306562.8
ENST00000510904.5
CDS CCA 90 bp AGTGGTCAGTCTGGCGCGGGCAGTGTCACCGGTTGCTGGGAAGACTaGGAGGCCAGCGAGCAGCGTACCAACCACTCAGCCTCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: SGQSGAGSVTGCWED*EASEQRTNHSASPA
Trigger: GGCCGGAGAGGCTGAGTGGTTGGTACGCTGCTCGCTGGCCTCCCAGTCTTCCCAGCAACCGGTGACACTGCCCGCGCCAGACTGACCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306562.8
ENST00000510904.5
CDS CCA 90 bp GCGTCGGCTAGTGGTCAGTCTGGCGCGGGCAGTGTCACCGGTTGCTaGGAAGACTGGGAGGCCAGCGAGCAGCGTACCAACCACTCAGCC +
Preference number: 5 (lower is better)
Translates to: ASASGQSGAGSVTGC*EDWEASEQRTNHSA
Trigger: GGCTGAGTGGTTGGTACGCTGCTCGCTGGCCTCCCAGTCTTCCCAGCAACCGGTGACACTGCCCGCGCCAGACTGACCACTAGCCGACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306562.8
ENST00000510904.5
CDS CCA 90 bp GTCAGCGTAGAGCTCTTGCCAAAGCACTTGCCGCACACGCCACACTaGTGGGCGTCTGAGACACGGGGTCGCGTGGGGCTCCGGGACACG +
Preference number: 5 (lower is better)
Translates to: VSVELLPKHLPHTPH*WASETRGRVGLRDT
Trigger: CGTGTCCCGGAGCCCCACGCGACCCCGTGTCTCAGACGCCCACCAGTGTGGCGTGTGCGGCAAGTGCTTTGGCAAGAGCTCTACGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 90 bp TTTGTCCGCACTCACTGCAGATGTAGAGGGTCTGGCCAGCATGCGTaGGCCTGTGCGCTCGGAGGTCAGCAGCCCGTGCACAGCGCTCAC +
Preference number: 5 (lower is better)
Translates to: FVRTHCRCRGSGQHA*ACALGGQQPVHSAH
Trigger: GTGAGCGCTGTGCACGGGCTGCTGACCTCCGAGCGCACAGGCGCACGCATGCTGGCCAGACCCTCTACATCTGCAGTGAGTGCGGACAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CCA 90 bp GAGCCTGCAAGTCTGGGCTCTGGAGCTTCTGCTGCCCCACCACGCTaGGCAGGAGTAGCCGCATGGGATGTCCTCCTCTTGTGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: EPASLGSGASAAPPR*AGVAAWDVLLLCLW
Trigger: CCAGAGGCACAAGAGGAGGACATCCCATGCGGCTACTCCTGCCCAGCGTGGTGGGGCAGCAGAAGCTCCAGAGCCCAGACTTGCAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000510904.5
ENST00000515369.5
CDS CCA 90 bp CCTGAACAGGTCGCTTTCCGTGGCCCACAGCAGCGCAGCCAATCCTaGGGCGCCTCAGTCGGCGCGCGTCACAAGTTGCTGGGCAAACTT +
Preference number: 5 (lower is better)
Translates to: PEQVAFRGPQQRSQS*GASVGARHKLLGKL
Trigger: AAGTTTGCCCAGCAACTTGTGACGCGCGCCGACTGAGGCGCCCCAGGATTGGCTGCGCTGCTGTGGGCCACGGAAAGCGACCTGTTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428515.5
CDS CCA 90 bp GGCACTGCAAGTCTGGGCTCTGGAGCTTCTGCTGCCCCACCACGCTaGGCAGGAGTAGCCGCATGGGATGTCCTCCTCTTGTGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: GTASLGSGASAAPPR*AGVAAWDVLLLCLW
Trigger: CCAGAGGCACAAGAGGAGGACATCCCATGCGGCTACTCCTGCCCAGCGTGGTGGGGCAGCAGAAGCTCCAGAGCCCAGACTTGCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505503.5
CDS-3UTR CAA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGACGGTGCAGTGCAAGCTaGGAGGCGACGCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRRCSAS*EATLKA
Trigger: GGCCTTCAGCGTCGCCTCCAAGCTTGCACTGCACCG...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 90 bp GTAGGTCAAGACGGCCGCTGTGGCGGAAGCTTTGTCCGCACTCACTaGAGATGTAGAGGGTCTGGCCAGCATGCGTGCGCCTGTGCGCTC +
Preference number: 5 (lower is better)
Translates to: VGQDGRCGGSFVRTH*RCRGSGQHACACAL
Trigger: GAGCGCACAGGCGCACGCATGCTGGCCAGACCCTCTACATCTGCAGTGAGTGCGGACAAAGCTTCCGCCACAGCGGCCGTCTTGACCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 90 bp AAGGCCTGGAAAGGGCACTGCAAGTCTGGGCTCTGGAGCTTCTGCTaGCCCACCACGCTGGGCAGGAGTAGCCGCATGGGATGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: KAWKGHCKSGLWSFC*PTTLGRSSRMGCPP
Trigger: AGGAGGACATCCCATGCGGCTACTCCTGCCCAGCGTGGTGGGGCAGCAGAAGCTCCAGAGCCCAGACTTGCAGTGCCCTTTCCAGGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505503.5
CDS-3UTR CAA 90 bp CCACCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGGTCAGCGTAGAGCTCTaGCCAAAGCACTTGCCGCAC +
Preference number: 5 (lower is better)
Translates to: PPSRDWPPLPGCRQLLAWVSVEL*PKHLPH
Trigger: GTGCGGCAAGTGCTTTGGCAAGAGCTCTACGCTGAC...CCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp AGGAGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCTGCGTGCGCCGGTGCTaGGTGAGGTCCGAGCGGTCG +
Preference number: 5 (lower is better)
Translates to: RRLREGLPTETGKVGGHICVRRC*VRSERS
Trigger: CGACCGCTCGGACCTCACCAAGCACCGGCGCACGCA...GATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp CCACCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGCGATGCACGTTGAGATaGGACACGCACGTGAACCGC +
Preference number: 5 (lower is better)
Translates to: PPSRDWPPLPGCRQLLAWRCTLR*DTHVNR
Trigger: GCGGTTCACGTGCGTGTCCAATCTCAACGTGCATCG...CCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 90 bp CACTCGGGGCATTTGTGTGGCTTGTGGCCGGCATGGTTGCGCCGATaGACGTTGAGATTGGACACGCACGTGAACCGCTTGCCGCACAGT +
Preference number: 5 (lower is better)
Translates to: HSGHLCGLWPAWLRR*TLRLDTHVNRLPHS
Trigger: ACTGTGCGGCAAGCGGTTCACGTGCGTGTCCAATCTCAACGTGCATCGGCGCAACCATGCCGGCCACAAGCCACACAAATGCCCCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp AGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGTCCAGCAGGGTCAGAGGTaGTCCCCAAGGGGTGCGCCC +
Preference number: 5 (lower is better)
Translates to: RLREGLPTETGKVGGHIVQQGQR*SPRGAP
Trigger: GGGCGCACCCCTTGGGGACAACCTCTGACCCTGCTG...GACGATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp AGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGTCGGGCAGTGTCACCGGTaGCTGGGAAGACTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: RLREGLPTETGKVGGHIVGQCHR*LGRLGG
Trigger: GCCTCCCAGTCTTCCCAGCAACCGGTGACACTGCCC...GACGATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 90 bp GTCCCAAGGCACGCTCTTCAAGTCTCTCTTCTGTACCTCACCCCATaGTGGAGCTCATCCCACAGGCAAAAGGGTCACGGCTCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: VPRHALQVSLLYLTP*WSSSHRQKGHGSCP
Trigger: GGGACAGGAGCCGTGACCCTTTTGCCTGTGGGATGAGCTCCAGCATGGGGTGAGGTACAGAAGAGAGACTTGAAGAGCGTGCCTTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510904.5
CDS CCA 90 bp TCTGGAGCTTCTGCTGCCCCACCACGCTGGGCAGGAGTAGCCGCATaGGATGTCCTCCTCTTGTGCCTCTGGAGTAAGATGTGCATTTCC +
Preference number: 5 (lower is better)
Translates to: SGASAAPPRWAGVAA*DVLLLCLWSKMCIS
Trigger: GGAAATGCACATCTTACTCCAGAGGCACAAGAGGAGGACATCCCATGCGGCTACTCCTGCCCAGCGTGGTGGGGCAGCAGAAGCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000505503.5
ENST00000510904.5
ENST00000515369.5
CDS CCA 90 bp TTCTTCTCTAAGGGGCAGACATTGTGGCTGTTCCAGGGTGAGCTGTaGCCAGGTTCACCCTGCACCGTGAGCCTGCAAGTCTGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: FFSKGQTLWLFQGEL*PGSPCTVSLQVWAL
Trigger: CAGAGCCCAGACTTGCAGGCTCACGGTGCAGGGTGAACCTGGCCACAGCTCACCCTGGAACAGCCACAATGTCTGCCCCTTAGAGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000510904.5
CDS CCA 90 bp AGAGAAGCCTCAGCAAGCCTCCCTCAACTAGGACACAGAGAACCCTaGCTTTTCCTGTTCAGCCGGCCCCTCAAAGACGAGGGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: REASASLPQLGHREP*LFLFSRPLKDEGSA
Trigger: GGCACTGCCCTCGTCTTTGAGGGGCCGGCTGAACAGGAAAAGCCAGGGTTCTCTGTGTCCTAGTTGAGGGAGGCTTGCTGAGGCTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp CCACATCGTCTTTTCCCAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTGCGCTGCCCGAAACCCTaGCCGCAAGTGGCGCACGCA +
Preference number: 5 (lower is better)
Translates to: PHRLFPNLHLRVASTVPVRCPKP*PQVAHA
Trigger: TGCGTGCGCCACTTGCGGCAAGGGTTTCGGGCAGCG...CACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTGGGAAAAGACGATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp AGGAGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCTCGCCCAGGTGCGTCTaGCGGTGCAGTGCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: RRLREGLPTETGKVGGHISPRCV*RCSASL
Trigger: CAAGCTTGCACTGCACCGCAAGACGCACCTGGGCGA...GATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp CCTTCACGTGACTGGCCACCTCTGCCAGGGTGCAGGCAGCTCCTAGCATGGAGAGCCATGAGCAAAAAGTaGACCGGCTCCAGGGGATTT +
Preference number: 5 (lower is better)
Translates to: PSRDWPPLPGCRQLLAWRAMSKK*TGSRGF
Trigger: AAATCCCCTGGAGCCGGTCAACTTTTTGCTCATGGC...TCTCCATGCTAGGAGCTGCCTGCACCCTGGCAGAGGTGGCCAGTCACGTGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS TCA 90 bp TTAAGAGCGAAGCACAACTATTCGCCGAATGCGGAACACGGCACCTaGACAGGTCGCTTTCCGTGGCCCACAGCAGCGCAGCCAATCCTG +
Preference number: 5 (lower is better)
Translates to: LRAKHNYSPNAEHGT*TGRFPWPTAAQPIL
Trigger: CAGGATTGGCTGCGCTGCTGTGGGCCACGGAAAGCGACCTGTTCAGGTGCCGTGTTCCGCATTCGGCGAATAGTTGTGCTTCGCTCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502697.5
CDS CCA 90 bp CCAAGGCACGCTCTTCAAGTCTCTCTTCTGTACCTCACCCCATGCTaGAGCTCATCCCACAGGCAAAAGGGTCACGGCTCCTGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: PRHALQVSLLYLTPC*SSSHRQKGHGSCPS
Trigger: AGAGGGACAGGAGCCGTGACCCTTTTGCCTGTGGGATGAGCTCCAGCATGGGGTGAGGTACAGAAGAGAGACTTGAAGAGCGTGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510904.5
CDS-3UTR CAA 90 bp AGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGTCCTCTTGCCAAAGCACTaGCCGCACACGCCACACTGG +
Preference number: 5 (lower is better)
Translates to: RLREGLPTETGKVGGHIVLLPKH*PHTPHW
Trigger: CCAGTGTGGCGTGTGCGGCAAGTGCTTTGGCAAGAG...GACGATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp CGAGTTATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGCTGCACTCGGGGCATTaGTGTGGCTTGTGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: RVIRGQHGKRADRVVGVELHSGH*CGLWPA
Trigger: TGCCGGCCACAAGCCACACAAATGCCCCGAGTGCAG...CTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATAACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp AGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGTCGTTCTGAGAGGCCCCTaGATCTGCCCTGGGGACATG +
Preference number: 5 (lower is better)
Translates to: RLREGLPTETGKVGGHIVVLRGP*ICPGDM
Trigger: CATGTCCCCAGGGCAGATCAAGGGGCCTCTCAGAAC...GACGATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 90 bp ACTTGGTGCCTGGTACTTAAGAGCGAAGCACAACTATTCGCCGAATaGGGAACACGGCACCTGAACAGGTCGCTTTCCGTGGCCCACAGC +
Preference number: 5 (lower is better)
Translates to: TWCLVLKSEAQLFAE*GTRHLNRSLSVAHS
Trigger: GCTGTGGGCCACGGAAAGCGACCTGTTCAGGTGCCGTGTTCCGCATTCGGCGAATAGTTGTGCTTCGCTCTTAAGTACCAGGCACCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502697.5
CDS-3UTR CAA 90 bp AGGCTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGTCGTACAGGTTTGGCGCTaGAGTCCCAAGGCACGCTCT +
Preference number: 5 (lower is better)
Translates to: RLREGLPTETGKVGGHIVVQVWR*SPKARS
Trigger: AGAGCGTGCCTTGGGACTCAAGCGCCAAACCTGTAC...GACGATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS TCA 90 bp TACGGATGCGGAGTAGGACACTCGCTAGGGTACAGGTTTGGCGCTTaGGTCCCAAGGCACGCTCTTCAAGTCTCTCTTCTGTACCTCACC +
Preference number: 5 (lower is better)
Translates to: YGCGVGHSLGYRFGA*VPRHALQVSLLYLT
Trigger: GGTGAGGTACAGAAGAGAGACTTGAAGAGCGTGCCTTGGGACTCAAGCGCCAAACCTGTACCCTAGCGAGTGTCCTACTCCGCATCCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000505503.5
ENST00000510904.5
ENST00000515369.5
CDS-3UTR CAA 90 bp GAGAGCACAGTAGCATTAAAGGGACACACCAACACCTGGGCTCTTGCACACAGGGCTGTGGCGGAAGCTTaGTCCGCACTCACTGCAGAT +
Preference number: 5 (lower is better)
Translates to: ESTVALKGHTNTWALAHRAVAEA*SALTAD
Trigger: ATCTGCAGTGAGTGCGGACAAAGCTTCCGCCACAGC...CCTGTGTGCAAGAGCCCAGGTGTTGGTGTGTCCCTTTAATGCTACTGTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp TCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGCCACAGGGCTGGTAACACGCACGTGAACCGCTaGCCGCACAGTTCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: SETELTGNQESRSHRAGNTHVNR*PHSSQR
Trigger: CCGCTGCGAACTGTGCGGCAAGCGGTTCACGTGCGT...GTTACCAGCCCTGTGGCTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp CATCTACGAGTTGCCTCAACTGTCCCCGTGATACTATATAGGTGCTTGCCCAACGGGCATTTGTGTGGCTaGTGGCCGGCATGGTTGCGC +
Preference number: 5 (lower is better)
Translates to: HLRVASTVPVILYRCLPNGHLCG*WPAWLR
Trigger: GCGCAACCATGCCGGCCACAAGCCACACAAATGCCC...GTTGGGCAAGCACCTATATAGTATCACGGGGACAGTTGAGGCAACTCGTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp TATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGTGCACCCACATGGTTTaGGCCTGGGTCCCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: YTRTAWQKGRQGSRCRGECTHMV*AWVPVK
Trigger: TTTCACTGGGACCCAGGCCAAAACCATGTGGGTGCA...CTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp ATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGGAACCTCATGTTCCACTaGGCAGTGCCTGGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: IRGQHGKRADRVVGVEARNLMFH*AVPGFV
Trigger: CACAAAGCCAGGCACTGCCAAGTGGAACATGAGGTT...CCTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CCA 90 bp AAAACTGGTCTGATTTCAGGGTTCTTCTCTAAGGGGCAGACATTGTaGCTGTTCCAGGGTGAGCTGTGGCCAGGTTCACCCTGCACCGTG +
Preference number: 5 (lower is better)
Translates to: KTGLISGFFSKGQTL*LFQGELWPGSPCTV
Trigger: CACGGTGCAGGGTGAACCTGGCCACAGCTCACCCTGGAACAGCCACAATGTCTGCCCCTTAGAGAAGAACCCTGAAATCAGACCAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000510904.5
CDS-3UTR CAA 90 bp CCACATCGTCTTTTCCCAAATCTCCATCTACGAGTTGCCTCAACTGTCCCCGTGTTGCGCCGATGCACGTaGAGATTGGACACGCACGTG +
Preference number: 5 (lower is better)
Translates to: PHRLFPNLHLRVASTVPVLRRCT*RLDTHV
Trigger: CACGTGCGTGTCCAATCTCAACGTGCATCGGCGCAA...CACGGGGACAGTTGAGGCAACTCGTAGATGGAGATTTGGGAAAAGACGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CCA 90 bp CTTCCATTACGGATGCGGAGTAGGACACTCGCTAGGGTACAGGTTTaGCGCTTGAGTCCCAAGGCACGCTCTTCAAGTCTCTCTTCTGTA +
Preference number: 5 (lower is better)
Translates to: LPLRMRSRTLARVQV*RLSPKARSSSLSSV
Trigger: TACAGAAGAGAGACTTGAAGAGCGTGCCTTGGGACTCAAGCGCCAAACCTGTACCCTAGCGAGTGTCCTACTCCGCATCCGTAATGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000505503.5
ENST00000510904.5
ENST00000515369.5
CDS-3UTR CAA 90 bp CTACGTGAAGGGCTGCCAACAGAAACTGGAAAGGTAGGAGGCCACATCGTCTTTTCTAAGGGGCAGACATaGTGGCTGTTCCAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: LREGLPTETGKVGGHIVFSKGQT*WLFQGE
Trigger: CTCACCCTGGAACAGCCACAATGTCTGCCCCTTAGA...AAAGACGATGTGGCCTCCTACCTTTCCAGTTTCTGTTGGCAGCCCTTCACGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp TCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGAAGCCACAGGGCTGGTAACTTGTGGCCGGCATGGTaGCGCCGATGCACGTTGAGA +
Preference number: 5 (lower is better)
Translates to: SETELTGNQESRSHRAGNLWPAW*RRCTLR
Trigger: TCTCAACGTGCATCGGCGCAACCATGCCGGCCACAA...GTTACCAGCCCTGTGGCTTCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp ATACGAGGACAGCATGGCAAAAGGGCCGACAGGGTAGTAGGTGTAGAGGCGAGGGGTGGCTCCCATGATTaGGAAATAACCTCATGTTCC +
Preference number: 5 (lower is better)
Translates to: IRGQHGKRADRVVGVEARGGSHD*EITSCS
Trigger: GGAACATGAGGTTATTTCCAAATCATGGGAGCCACC...CCTCGCCTCTACACCTACTACCCTGTCGGCCCTTTTGCCATGCTGTCCTCGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp CATCTACGAGTTGCCTCAACTGTCCCCGTGATACTATATAGGTGCTTGCCCAACTGGGATGTCCTCCTCTaGTGCCTCTGGAGTAAGATG +
Preference number: 5 (lower is better)
Translates to: HLRVASTVPVILYRCLPNWDVLL*CLWSKM
Trigger: CATCTTACTCCAGAGGCACAAGAGGAGGACATCCCA...GTTGGGCAAGCACCTATATAGTATCACGGGGACAGTTGAGGCAACTCGTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp CCTCCATACCCACATTTCTCAGAAACAGAGTTAACAGGGAACCAAGAGTCAAGACCAACACCTGGGCTCTaGCACACAGGGGAGTCTAAG +
Preference number: 5 (lower is better)
Translates to: PPYPHFSETELTGNQESRPTPGL*HTGESK
Trigger: CTTAGACTCCCCTGTGTGCAAGAGCCCAGGTGTTGG...TCTTGACTCTTGGTTCCCTGTTAACTCTGTTTCTGAGAAATGTGGGTATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS-3UTR CAA 90 bp TGTGACCATTACCTGAAGAGGCAGGACAACAAAAGTAATCAGGAAAGGAGAAGAGCAAAAGGGTCACGCTaGAAGTGGAAACCGGTCGCC +
Preference number: 5 (lower is better)
Translates to: CDHYLKRQDNKSNQERRRAKGSR*KWKPVA
Trigger: GGCGACCGGTTTCCACTTCAAGCGTGACCCTTTTGC...TCTTCTCCTTTCCTGATTACTTTTGTTGTCCTGCCTCTTCAGGTAATGGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 72 bp CGCAGCCCGGCGCCGCTTCGGAAGGCTCGCGGGCACTaGGCGCAGCGGTGGGGTGGGGCAGCAGGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: RSPAPLRKARGH*AQRWGGAAGSE
Trigger: CTCTGACCCTGCTGCCCCACCCCACCGCTGCGCGCAGTGCCCGCGAGCCTTCCGAAGCGGCGCCGGGCTGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS TCA 72 bp GGTCGCGTGGGGCTCCGGGACACGTGGATGCGCGCGTaGCTCCGCAGCCCGGCGCCGCTTCGGAAGGCTCGC +
Preference number: 6 (lower is better)
Translates to: GRVGLRDTWMRA*LRSPAPLRKAR
Trigger: GCGAGCCTTCCGAAGCGGCGCCGGGCTGCGGAGTCACGCGCGCATCCACGTGTCCCGGAGCCCCACGCGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 72 bp CCTCCTCAGACACCGCGCGGTTCCCACTCAGCCGGCTaGCGACCCCCGCCTCCCGGACTGCGGGACTGGGGC +
Preference number: 6 (lower is better)
Translates to: PPQTPRGSHSAG*RPPPPGLRDWG
Trigger: GCCCCAGTCCCGCAGTCCGGGAGGCGGGGGTCGGCAGCCGGCTGAGTGGGAACCGCGCGGTGTCTGAGGAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306562.8
ENST00000505503.5
CDS GCA 72 bp GCAGCGCCGGGAGGTGCGGGAAGCGCCGGCCGCATGTaGGGCAGGGGCAAGTGCGGCATCGCTGCCGGTGTG +
Preference number: 6 (lower is better)
Translates to: AAPGGAGSAGRM*GRGKCGIAAGV
Trigger: CACACCGGCAGCGATGCCGCACTTGCCCCTGCCGCACATGCGGCCGGCGCTTCCCGCACCTCCCGGCGCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 72 bp AGACACGGGGTCGCGTGGGGCTCCGGGACACGTGGATaGGCGCGTGACTCCGCAGCCCGGCGCCGCTTCGGA +
Preference number: 6 (lower is better)
Translates to: RHGVAWGSGTRG*ARDSAARRRFG
Trigger: TCCGAAGCGGCGCCGGGCTGCGGAGTCACGCGCGCATCCACGTGTCCCGGAGCCCCACGCGACCCCGTGTCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS TCA 72 bp ACGGCGGCAGCGGTGCGGGCGCGCGTGTGGGCCCGCTaGTGCTGTGACAGCGAGCGGCTGTGGCTGAAGCAC +
Preference number: 6 (lower is better)
Translates to: TAAAVRARVWAR*CCDSERLWLKH
Trigger: GTGCTTCAGCCACAGCCGCTCGCTGTCACAGCATCAGCGGGCCCACACGCGCGCCCGCACCGCTGCCGCCGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CCA 72 bp GGCCCCTCAAAGACGAGGGCAGTGCCCACTGCGGACTaGATGGCAACGGCGGCAGCGGTGCGGGCGCGCGTG +
Preference number: 6 (lower is better)
Translates to: GPSKTRAVPTAD*MATAAAVRARV
Trigger: CACGCGCGCCCGCACCGCTGCCGCCGTTGCCATCCAGTCCGCAGTGGGCACTGCCCTCGTCTTTGAGGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 72 bp GCGGGAAGCGCCGGCCGCATGTGCGGCAGGGGCAAGTaGGGCATCGCTGCCGGTGTGCGCCCAAGTGTAGGT +
Preference number: 6 (lower is better)
Translates to: AGSAGRMCGRGK*GIAAGVRPSVG
Trigger: ACCTACACTTGGGCGCACACCGGCAGCGATGCCGCACTTGCCCCTGCCGCACATGCGGCCGGCGCTTCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CCA 72 bp GGGTCAGAGGTTGTCCCCAAGGGGTGCGCCCGCGCCTaGTGGAAGAGCAGCGCGCTCTGCCGGAAGGTGCGG +
Preference number: 6 (lower is better)
Translates to: GSEVVPKGCARA*WKSSALCRKVR
Trigger: CCGCACCTTCCGGCAGAGCGCGCTGCTCTTCCACCAGGCGCGGGCGCACCCCTTGGGGACAACCTCTGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CCA 72 bp CGCCACACTGGTGGGCGTCTGAGACACGGGGTCGCGTaGGGCTCCGGGACACGTGGATGCGCGCGTGACTCC +
Preference number: 6 (lower is better)
Translates to: RHTGGRLRHGVA*GSGTRGCARDS
Trigger: GGAGTCACGCGCGCATCCACGTGTCCCGGAGCCCCACGCGACCCCGTGTCTCAGACGCCCACCAGTGTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CCA 72 bp CCTCAAAGACGAGGGCAGTGCCCACTGCGGACTGGATaGCAACGGCGGCAGCGGTGCGGGCGCGCGTGTGGG +
Preference number: 6 (lower is better)
Translates to: PQRRGQCPLRTG*QRRQRCGRACG
Trigger: CCCACACGCGCGCCCGCACCGCTGCCGCCGTTGCCATCCAGTCCGCAGTGGGCACTGCCCTCGTCTTTGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 72 bp TTCAGCCGGCCCCTCAAAGACGAGGGCAGTGCCCACTaGGGACTGGATGGCAACGGCGGCAGCGGTGCGGGC +
Preference number: 6 (lower is better)
Translates to: FSRPLKDEGSAH*GLDGNGGSGAG
Trigger: GCCCGCACCGCTGCCGCCGTTGCCATCCAGTCCGCAGTGGGCACTGCCCTCGTCTTTGAGGGGCCGGCTGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 72 bp CCGCACTCTGCGCACTCCGCTGGCCGTTCGCCCAGGTaGGTCTTGCGGTGCAGTGCAAGCTTGGAGGCGACG +
Preference number: 6 (lower is better)
Translates to: PHSAHSAGRSPR*VLRCSASLEAT
Trigger: CGTCGCCTCCAAGCTTGCACTGCACCGCAAGACGCACCTGGGCGAACGGCCAGCGGAGTGCGCAGAGTGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS TCA 72 bp AAAGCACTTGCCGCACACGCCACACTGGTGGGCGTCTaGGACACGGGGTCGCGTGGGGCTCCGGGACACGTG +
Preference number: 6 (lower is better)
Translates to: KALAAHATLVGV*DTGSRGAPGHV
Trigger: CACGTGTCCCGGAGCCCCACGCGACCCCGTGTCTCAGACGCCCACCAGTGTGGCGTGTGCGGCAAGTGCTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CCA 72 bp CCTACCCTAGCCCCTTGCCCGTGGCGCCAGCCGACTTaGAGGGCGAGACCGGGCACCAAAAACGTAGTGGGG +
Preference number: 6 (lower is better)
Translates to: PTLAPCPWRQPT*RARPGTKNVVG
Trigger: CCCCACTACGTTTTTGGTGCCCGGTCTCGCCCTCCAAGTCGGCTGGCGCCACGGGCAAGGGGCTAGGGTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428515.5
CDS CAA 72 bp GCCTACCCTAGCCCCTTGCCCGTGGCGCCAGCCGACTaGGAGGGCGAGACCGGGCACCAAAAACGTAGTGGG +
Preference number: 6 (lower is better)
Translates to: AYPSPLPVAPAD*EGETGHQKRSG
Trigger: CCCACTACGTTTTTGGTGCCCGGTCTCGCCCTCCAAGTCGGCTGGCGCCACGGGCAAGGGGCTAGGGTAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428515.5
CDS GCA 72 bp GCTAGTGGTCAGTCTGGCGCGGGCAGTGTCACCGGTTaGTGGGAAGACTGGGAGGCCAGCGAGCAGCGTACC +
Preference number: 6 (lower is better)
Translates to: ASGQSGAGSVTG*WEDWEASEQRT
Trigger: GGTACGCTGCTCGCTGGCCTCCCAGTCTTCCCAGCAACCGGTGACACTGCCCGCGCCAGACTGACCACTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306562.8
ENST00000510904.5
CDS GCA 72 bp CACTCCGCTGGCCGTTCGCCCAGGTGCGTCTTGCGGTaGAGTGCAAGCTTGGAGGCGACGCTGAAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: HSAGRSPRCVLR*SASLEATLKAL
Trigger: CAAGGCCTTCAGCGTCGCCTCCAAGCTTGCACTGCACCGCAAGACGCACCTGGGCGAACGGCCAGCGGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 72 bp TTTCCTGTTCAGCCGGCCCCTCAAAGACGAGGGCAGTaGCCACTGCGGACTGGATGGCAACGGCGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: FPVQPAPQRRGQ*PLRTGWQRRQR
Trigger: CCGCTGCCGCCGTTGCCATCCAGTCCGCAGTGGGCACTGCCCTCGTCTTTGAGGGGCCGGCTGAACAGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CCA 72 bp TCTGGCGCGGGCAGTGTCACCGGTTGCTGGGAAGACTaGGAGGCCAGCGAGCAGCGTACCAACCACTCAGCC +
Preference number: 6 (lower is better)
Translates to: SGAGSVTGCWED*EASEQRTNHSA
Trigger: GGCTGAGTGGTTGGTACGCTGCTCGCTGGCCTCCCAGTCTTCCCAGCAACCGGTGACACTGCCCGCGCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306562.8
ENST00000510904.5
CDS CCA 72 bp GAGCTCTTGCCAAAGCACTTGCCGCACACGCCACACTaGTGGGCGTCTGAGACACGGGGTCGCGTGGGGCTC +
Preference number: 6 (lower is better)
Translates to: ELLPKHLPHTPH*WASETRGRVGL
Trigger: GAGCCCCACGCGACCCCGTGTCTCAGACGCCCACCAGTGTGGCGTGTGCGGCAAGTGCTTTGGCAAGAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CAA 72 bp TCTGCGCACTCCGCTGGCCGTTCGCCCAGGTGCGTCTaGCGGTGCAGTGCAAGCTTGGAGGCGACGCTGAAG +
Preference number: 6 (lower is better)
Translates to: SAHSAGRSPRCV*RCSASLEATLK
Trigger: CTTCAGCGTCGCCTCCAAGCTTGCACTGCACCGCAAGACGCACCTGGGCGAACGGCCAGCGGAGTGCGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 72 bp ACTCACTGCAGATGTAGAGGGTCTGGCCAGCATGCGTaGGCCTGTGCGCTCGGAGGTCAGCAGCCCGTGCAC +
Preference number: 6 (lower is better)
Translates to: THCRCRGSGQHA*ACALGGQQPVH
Trigger: GTGCACGGGCTGCTGACCTCCGAGCGCACAGGCGCACGCATGCTGGCCAGACCCTCTACATCTGCAGTGAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 72 bp GACGGCCGCTGTGGCGGAAGCTTTGTCCGCACTCACTaGAGATGTAGAGGGTCTGGCCAGCATGCGTGCGCC +
Preference number: 6 (lower is better)
Translates to: DGRCGGSFVRTH*RCRGSGQHACA
Trigger: GGCGCACGCATGCTGGCCAGACCCTCTACATCTGCAGTGAGTGCGGACAAAGCTTCCGCCACAGCGGCCGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CAA 90 bp TGCGTCTGCAGGTGTCGCGTCAGCGTAGAGCTCTTGCCAAAGCACTaGCCGCACACGCCACACTGGTGGGCGTCTGAGACACGGGGTCGC +
Preference number: 6 (lower is better)
Translates to: CVCRCRVSVELLPKH*PHTPHWWASETRGR
Trigger: GCGACCCCGTGTCTCAGACGCCCACCAGTGTGGCGTGTGCGGCAAGTGCTTTGGCAAGAGCTCTACGCTGACGCGACACCTGCAGACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 72 bp TGGAAAGGGCACTGCAAGTCTGGGCTCTGGAGCTTCTaGTGCCCCACCACGCTGGGCAGGAGTAGCCGCATG +
Preference number: 6 (lower is better)
Translates to: WKGHCKSGLWSF*CPTTLGRSSRM
Trigger: CATGCGGCTACTCCTGCCCAGCGTGGTGGGGCAGCAGAAGCTCCAGAGCCCAGACTTGCAGTGCCCTTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505503.5
CDS CCA 72 bp AGTCTGGGCTCTGGAGCTTCTGCTGCCCCACCACGCTaGGCAGGAGTAGCCGCATGGGATGTCCTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: SLGSGASAAPPR*AGVAAWDVLLL
Trigger: CAAGAGGAGGACATCCCATGCGGCTACTCCTGCCCAGCGTGGTGGGGCAGCAGAAGCTCCAGAGCCCAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000505503.5
ENST00000510904.5
ENST00000515369.5
CDS TCA 72 bp TCCCCGCTGCCACTGCCCCAGATGTGGCAAACATGGTaGGGACGGGTTCACAGGGAAGCGTGCCACTCACAC +
Preference number: 6 (lower is better)
Translates to: SPLPLPQMWQTW*GRVHREACHSH
Trigger: GTGTGAGTGGCACGCTTCCCTGTGAACCCGTCCTCACCATGTTTGCCACATCTGGGGCAGTGGCAGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
CDS CAA 72 bp CAATCCTGGGGCGCCTCAGTCGGCGCGCGTCACAAGTaGCTGGGCAAACTTTCTTTGAGCGAGCCCCTTCCC +
Preference number: 6 (lower is better)
Translates to: QSWGASVGARHK*LGKLSLSEPLP
Trigger: GGGAAGGGGCTCGCTCAAAGAAAGTTTGCCCAGCAACTTGTGACGCGCGCCGACTGAGGCGCCCCAGGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428515.5
CDS CCA 72 bp TCTGCTGCCCCACCACGCTGGGCAGGAGTAGCCGCATaGGATGTCCTCCTCTTGTGCCTCTGGAGTAAGATG +
Preference number: 6 (lower is better)
Translates to: SAAPPRWAGVAA*DVLLLCLWSKM
Trigger: CATCTTACTCCAGAGGCACAAGAGGAGGACATCCCATGCGGCTACTCCTGCCCAGCGTGGTGGGGCAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000505503.5
ENST00000510904.5
ENST00000515369.5
CDS CCA 72 bp AAGGGGCAGACATTGTGGCTGTTCCAGGGTGAGCTGTaGCCAGGTTCACCCTGCACCGTGAGCCTGCAAGTC +
Preference number: 6 (lower is better)
Translates to: KGQTLWLFQGEL*PGSPCTVSLQV
Trigger: GACTTGCAGGCTCACGGTGCAGGGTGAACCTGGCCACAGCTCACCCTGGAACAGCCACAATGTCTGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000510904.5
CDS CAA 72 bp AGGTGTCGCGTCAGCGTAGAGCTCTTGCCAAAGCACTaGCCGCACACGCCACACTGGTGGGCGTCTGAGACA +
Preference number: 6 (lower is better)
Translates to: RCRVSVELLPKH*PHTPHWWASET
Trigger: TGTCTCAGACGCCCACCAGTGTGGCGTGTGCGGCAAGTGCTTTGGCAAGAGCTCTACGCTGACGCGACACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CAA 72 bp TTGTGGCCGGCATGGTTGCGCCGATGCACGTTGAGATaGGACACGCACGTGAACCGCTTGCCGCACAGTTCG +
Preference number: 6 (lower is better)
Translates to: LWPAWLRRCTLR*DTHVNRLPHSS
Trigger: CGAACTGTGCGGCAAGCGGTTCACGTGCGTGTCCAATCTCAACGTGCATCGGCGCAACCATGCCGGCCACAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CAA 72 bp CACTCGGGGCATTTGTGTGGCTTGTGGCCGGCATGGTaGCGCCGATGCACGTTGAGATTGGACACGCACGTG +
Preference number: 6 (lower is better)
Translates to: HSGHLCGLWPAW*RRCTLRLDTHV
Trigger: CACGTGCGTGTCCAATCTCAACGTGCATCGGCGCAACCATGCCGGCCACAAGCCACACAAATGCCCCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS TCA 72 bp TGCTGGAGCTCATCCCACAGGCAAAAGGGTCACGCTTaGAGTGGAAACCGGTCGCCGACTGCCTCCTCAGAC +
Preference number: 6 (lower is better)
Translates to: CWSSSHRQKGHA*SGNRSPTASSD
Trigger: GTCTGAGGAGGCAGTCGGCGACCGGTTTCCACTTCAAGCGTGACCCTTTTGCCTGTGGGATGAGCTCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306562.8
ENST00000505503.5
CDS TCA 72 bp AAGCACAACTATTCGCCGAATGCGGAACACGGCACCTaGACAGGTCGCTTTCCGTGGCCCACAGCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: KHNYSPNAEHGT*TGRFPWPTAAQ
Trigger: CTGCGCTGCTGTGGGCCACGGAAAGCGACCTGTTCAGGTGCCGTGTTCCGCATTCGGCGAATAGTTGTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502697.5
CDS CAA 90 bp GCCCCACCACGCTGGGCAGGAGTAGCCGCATGGGATGTCCTCCTCTaGTGCCTCTGGAGTAAGATGTGCATTTCCTTCCATTACGGATGC +
Preference number: 6 (lower is better)
Translates to: APPRWAGVAAWDVLL*CLWSKMCISFHYGC
Trigger: GCATCCGTAATGGAAGGAAATGCACATCTTACTCCAGAGGCACAAGAGGAGGACATCCCATGCGGCTACTCCTGCCCAGCGTGGTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000505503.5
ENST00000510904.5
ENST00000515369.5
CDS GCA 72 bp CATTTGTGTGGCTTGTGGCCGGCATGGTTGCGCCGATaGACGTTGAGATTGGACACGCACGTGAACCGCTTG +
Preference number: 6 (lower is better)
Translates to: HLCGLWPAWLRR*TLRLDTHVNRL
Trigger: CAAGCGGTTCACGTGCGTGTCCAATCTCAACGTGCATCGGCGCAACCATGCCGGCCACAAGCCACACAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS CCA 72 bp CGGATGCGGAGTAGGACACTCGCTAGGGTACAGGTTTaGCGCTTGAGTCCCAAGGCACGCTCTTCAAGTCTC +
Preference number: 6 (lower is better)
Translates to: RMRSRTLARVQV*RLSPKARSSSL
Trigger: GAGACTTGAAGAGCGTGCCTTGGGACTCAAGCGCCAAACCTGTACCCTAGCGAGTGTCCTACTCCGCATCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000505503.5
ENST00000510904.5
ENST00000515369.5
CDS CAA 72 bp ATGCTGGAGCTCATCCCACAGGCAAAAGGGTCACGCTaGAAGTGGAAACCGGTCGCCGACTGCCTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: MLELIPQAKGSR*KWKPVADCLLR
Trigger: TCTGAGGAGGCAGTCGGCGACCGGTTTCCACTTCAAGCGTGACCCTTTTGCCTGTGGGATGAGCTCCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306562.8
ENST00000505503.5
CDS GCA 72 bp CACGCTCTTCAAGTCTCTCTTCTGTACCTCACCCCATaGTGGAGCTCATCCCACAGGCAAAAGGGTCACGGC +
Preference number: 6 (lower is better)
Translates to: HALQVSLLYLTP*WSSSHRQKGHG
Trigger: GCCGTGACCCTTTTGCCTGTGGGATGAGCTCCAGCATGGGGTGAGGTACAGAAGAGAGACTTGAAGAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510904.5
CDS CCA 72 bp TCAGCAAGCCTCCCTCAACTAGGACACAGAGAACCCTaGCTTTTCCTGTTCAGCCGGCCCCTCAAAGACGAG +
Preference number: 6 (lower is better)
Translates to: SASLPQLGHREP*LFLFSRPLKDE
Trigger: CTCGTCTTTGAGGGGCCGGCTGAACAGGAAAAGCCAGGGTTCTCTGTGTCCTAGTTGAGGGAGGCTTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306562.8
CDS GCA 72 bp CACGCTCTTCAAGTCTCTCTTCTGTACCTCACCCCATaGTGGAGCTCATCCCACAGGCAAAAGGGTCACGCT +
Preference number: 6 (lower is better)
Translates to: HALQVSLLYLTP*WSSSHRQKGHA
Trigger: AGCGTGACCCTTTTGCCTGTGGGATGAGCTCCAGCATGGGGTGAGGTACAGAAGAGAGACTTGAAGAGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000505503.5
ENST00000515369.5
CDS CAA 90 bp TTACGGATGCGGAGTAGGACACTCGCTAGGGTACAGGTTTGGCGCTaGAGTCCCAAGGCACGCTCTTCAAGTCTCTCTTCTGTACCTCAC +
Preference number: 6 (lower is better)
Translates to: LRMRSRTLARVQVWR*SPKARSSSLSSVPH
Trigger: GTGAGGTACAGAAGAGAGACTTGAAGAGCGTGCCTTGGGACTCAAGCGCCAAACCTGTACCCTAGCGAGTGTCCTACTCCGCATCCGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000505503.5
ENST00000510904.5
ENST00000515369.5
CDS GCA 72 bp CTGGTACTTAAGAGCGAAGCACAACTATTCGCCGAATaGGGAACACGGCACCTGAACAGGTCGCTTTCCGTG +
Preference number: 6 (lower is better)
Translates to: LVLKSEAQLFAE*GTRHLNRSLSV
Trigger: CACGGAAAGCGACCTGTTCAGGTGCCGTGTTCCGCATTCGGCGAATAGTTGTGCTTCGCTCTTAAGTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502697.5
CDS CCA 72 bp GGAGTAGCCGCATGGGATGTCCTCCTCTTGTGCCTCTaGAGTAAGATGTGCATTTCCTTCCATTACGGATGC +
Preference number: 6 (lower is better)
Translates to: GVAAWDVLLLCL*SKMCISFHYGC
Trigger: GCATCCGTAATGGAAGGAAATGCACATCTTACTCCAGAGGCACAAGAGGAGGACATCCCATGCGGCTACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000505503.5
ENST00000510904.5
ENST00000515369.5
CDS GCA 72 bp CTCTGGAGTAAGATGTGCATTTCCTTCCATTACGGATaGGGAGTAGGACACTCGCTAGGGTACAGGTTTGGC +
Preference number: 6 (lower is better)
Translates to: LWSKMCISFHYG*GVGHSLGYRFG
Trigger: GCCAAACCTGTACCCTAGCGAGTGTCCTACTCCGCATCCGTAATGGAAGGAAATGCACATCTTACTCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306562.8
ENST00000423362.1
ENST00000428515.5
ENST00000502697.5
ENST00000505503.5
ENST00000510904.5
ENST00000515369.5
CDS GCA 72 bp GTCACGCTTGAAGTGGAAACTCATCTGGGGACTTGGTaGCTGGTACTTAAGAGCGAAGCACAACTATTCGCC +
Preference number: 6 (lower is better)
Translates to: VTLEVETHLGTW*LVLKSEAQLFA
Trigger: GGCGAATAGTTGTGCTTCGCTCTTAAGTACCAGGCACCAAGTCCCCAGATGAGTTTCCACTTCAAGCGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502697.5
CDS GCA 72 bp AAAGAAGGGAAGCTGGCTACTCATCTGGGGACTTGGTaGCTGGTACTTAAGAGCGAAGCACAACTATTCGCC +
Preference number: 6 (lower is better)
Translates to: KEGKLATHLGTW*LVLKSEAQLFA
Trigger: GGCGAATAGTTGTGCTTCGCTCTTAAGTACCAGGCACCAAGTCCCCAGATGAGTAGCCAGCTTCCCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515369.5
CDS CCA 72 bp CGCTTGAAGTGGAAACTCATCTGGGGACTTGGTGCCTaGTACTTAAGAGCGAAGCACAACTATTCGCCGAAT +
Preference number: 6 (lower is better)
Translates to: RLKWKLIWGLGA*YLRAKHNYSPN
Trigger: ATTCGGCGAATAGTTGTGCTTCGCTCTTAAGTACCAGGCACCAAGTCCCCAGATGAGTTTCCACTTCAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502697.5
CDS CCA 72 bp AGGGTCACGCTTGAAGTGGAAACTCATCTGGGGACTTaGTGCCTGGTACTTAAGAGCGAAGCACAACTATTC +
Preference number: 6 (lower is better)
Translates to: RVTLEVETHLGT*CLVLKSEAQLF
Trigger: GAATAGTTGTGCTTCGCTCTTAAGTACCAGGCACCAAGTCCCCAGATGAGTTTCCACTTCAAGCGTGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502697.5