RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF668 (Homo sapiens)

Ensembl gene IDs: ENSG00000167394

Ensembl transcript IDs: ENST00000300849.5, ENST00000394983.6, ENST00000414399.1, ENST00000417935.1, ENST00000426488.6, ENST00000442862.2, ENST00000535577.5, ENST00000538906.5, ENST00000539836.3, ENST00000564456.1

Found 481 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGCCCCCGATGGGGGCTaGGCTCCCGGAGTGTGGTGC +
Preference number: 2 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSAPDGG*APGVWC
Trigger: GCACCACACTCCGGGAGCCCAGCCCCCATCGGGGGC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
3UTR-3UTR CCA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCGCCCCCGATGGGGGCTaGGCTCCCGGAGTGTGGTGC +
Preference number: 2 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLAPDGG*APGVWC
Trigger: GCACCACACTCCGGGAGCCCAGCCCCCATCGGGGGC...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535577.5
3UTR-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGCCCCCGATGGGGGCTaGGCTCCCGGAGTGTGGTGC +
Preference number: 2 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFAPDGG*APGVWC
Trigger: GCACCACACTCCGGGAGCCCAGCCCCCATCGGGGGC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
3UTR-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGCCCCCGATGGGGGCTaGGCTCCCGGAGTGTGGTGC +
Preference number: 2 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCAPDGG*APGVWC
Trigger: GCACCACACTCCGGGAGCCCAGCCCCCATCGGGGGC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
3UTR-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCACAGGAAGCCCCCGATaGGGGCTGGGCTCCCGGAGT +
Preference number: 2 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCTGSPR*GLGSRS
Trigger: ACTCCGGGAGCCCAGCCCCCATCGGGGGCTTCCTGT...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
3UTR-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCAGGGGAGCTAGTTGCTaGGGGGTAGGGATCTGGAGT +
Preference number: 2 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSRGASC*GVGIWS
Trigger: ACTCCAGATCCCTACCCCTCAGCAACTAGCTCCCCT...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
3UTR-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCCCAGCTCTCTTAGCTaGCCGACAGGGGAGCTAGTT +
Preference number: 2 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQPSSLS*PTGELV
Trigger: AACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
3UTR-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCCCAGCTCTCTTAGCTaGCCGACAGGGGAGCTAGTT +
Preference number: 2 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSPSSLS*PTGELV
Trigger: AACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
3UTR-3UTR TCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCAGGGGAGCTAGTTGCTaGGGGGTAGGGATCTGGAGT +
Preference number: 2 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFRGASC*GVGIWS
Trigger: ACTCCAGATCCCTACCCCTCAGCAACTAGCTCCCCT...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
3UTR-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCCCAGCTCTCTTAGCTaGCCGACAGGGGAGCTAGTT +
Preference number: 2 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFPSSLS*PTGELV
Trigger: AACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
3UTR-3UTR TCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCAGGGGAGCTAGTTGCTaGGGGGTAGGGATCTGGAGT +
Preference number: 2 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCRGASC*GVGIWS
Trigger: ACTCCAGATCCCTACCCCTCAGCAACTAGCTCCCCT...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
3UTR-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCCCAGCTCTCTTAGCTaGCCGACAGGGGAGCTAGTT +
Preference number: 2 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCPSSLS*PTGELV
Trigger: AACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCCGGAGCTCCGGGTGTaGGCGCTCGTGCCGACGCAG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGPELRV*ALVPTQ
Trigger: CTGCGTCGGCACGAGCGCTCACACCCGGAGCTCCGG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCTGCCGGCCCATGTGTaGCAGCGTGGCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGLPAHV*QRGALP
Trigger: GGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGTGTGGCTGCGCCCGTaGCTGCGCAGCTCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGVWLRP*LRSSGA
Trigger: GGCACCCGAGCTGCGCAGCCACGGGCGCAGCCACAC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGCACACGCCGGTGCATaGCCAGGTCCGCCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGAHAGA*PGPPAA
Trigger: GGCAGCCGGCGGACCTGGCCATGCACCGGCGTGTGC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGCCCCCGATGGGGGCTaGGCTCCCGGAGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGAPDGG*APGVWC
Trigger: GCACCACACTCCGGGAGCCCAGCCCCCATCGGGGGC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCCAGCGCGTGCCGCTTaGGGTCCCAGGACGCCACGA +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGPARAA*GPRTPR
Trigger: TCGTGGCGTCCTGGGACCTCAAGCGGCACGCGCTGG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGTGCTGCCGGGGCGGCTaGACTCTCACCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGCCRGG*TLTCHA
Trigger: GGCGTGGCAGGTGAGAGTTCAGCCGCCCCGGCAGCA...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGTCTCCCCCGTGTGGCTaGGCCCGTGGCTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGSPPCG*ARGCAA
Trigger: AGCTGCGCAGCCACGGGCGCAGCCACACGGGGGAGA...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCGCAGGCACACGGGCTaGATGAAGCGGCGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGRRHTG*MKRRPH
Trigger: GTGCGGCCGCCGCTTCATGCAGCCCGTGTGCCTGCG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGGCAGTTCGCCAGCGTaGGAGGCCAGGTGCACGCGC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGGSSPA*EARCTR
Trigger: GCGCGTGCACCTGGCCTCGCACGCTGGCGAACTGCC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGTGTGCACACGCCGGTaGATGGCCAGGTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGVCTRR*MARSAG
Trigger: GCCGGCGGACCTGGCCATGCACCGGCGTGTGCACAC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGGCCGCTGGCCAGAGTaGACCAGCGCGTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGGRWPE*TSACRL
Trigger: CAAGCGGCACGCGCTGGTGCACTCTGGCCAGCGGCC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCTAGGACCGCGGGAGTaGTGGCCGGGCCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGLGPRE*WPGLSR
Trigger: CCTGCTGAGGCCCGGCCACCACTCCCGCGGTCCTAG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR TCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCCCGGCTATGCTTCGTaGGGCTGGCACGCTCGGCGA +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGPGYAS*GWHARR
Trigger: TCGCCGAGCGTGCCAGCCTCACGAAGCATAGCCGGG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGGCAGCGTGGCGCGCTaGCCTGGGCGCGTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGGSVAR*PGRVWK
Trigger: TTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGAGGGGTCGGAGAACATaGGGCCGCAGCGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGRGRRT*GRSAGT
Trigger: TGTGCCCGCGCTGCGGCCGCATGTTCTCCGACCCCT...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGGGCGCTCCCCCGAGTaGACCCGGCTATGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGGRSPE*TRLCFV
Trigger: CACGAAGCATAGCCGGGTGCACTCGGGGGAGCGCCC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGTCATGGGCGCGCTGGTaGCGACGGAAGCTCGAGGGG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGSWARW*RRKLEG
Trigger: CCCCTCGAGCTTCCGTCGCCACCAGCGCGCCCATGA...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGGCTTCACCCCTTCATaGGCGCGCTGGTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGGFTPS*ARWWRR
Trigger: CCGTCGCCACCAGCGCGCCCATGAAGGGGTGAAGCC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGACAGGAAGCCCCCGATaGGGGCTGGGCTCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGTGSPR*GLGSRS
Trigger: ACTCCGGGAGCCCAGCCCCCATCGGGGGCTTCCTGT...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGGTCTCTGTGTGTGCTaGGGCAAGGGGACGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGGLCVC*GKGTPG
Trigger: GCCTGGCGTCCCCTTGCCTCAGCACACACAGAGACC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR TCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGTGCGCTGGTGGCACGTaGGCGAGGATGAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGCAGGT*ARMSGR
Trigger: TCTCCCGCTCATCCTCGCTCACGTGCCACCAGCGCA...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGCTGCGCAGCTCGGGTaGCGTCTTGTAGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGAAQLG*RLVGLG
Trigger: CCCAAGGCCTACAAGACGGCACCCGAGCTGCGCAGC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGTCTCCCCCGAGTGCGTaGGCTCGTGGCTCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGSPPSA*ARGSGR
Trigger: CCTACCAGAGCCACGAGCGCACGCACTCGGGGGAGA...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCACCCGCGGCCTCACTaGTTCGATGGGTCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGHPRPH*FDGSAR
Trigger: ACGAGCGGACCCATCGAAGCAGTGAGGCCGCGGGTG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGAGTGCGGCTGTGTTTaGGCAGCCCAGCCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGECGCV*AAQPGQ
Trigger: CTGACCGGGCTGGGCTGCGCAAACACAGCCGCACTC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCCTTCATGGGCGCGCTaGTGGCGACGGAAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGPSWAR*WRRKLE
Trigger: CTCGAGCTTCCGTCGCCACCAGCGCGCCCATGAAGG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGCACGTGAGCGAGGATaGGCGGGAGAAGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGARERG*AGEALP
Trigger: GGGAAGAGCTTCTCCCGCTCATCCTCGCTCACGTGC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGAGTGCACCCGGCTATaGTTCGTGAGGCTGGCACGC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGECTRL*FVRLAR
Trigger: GCGTGCCAGCCTCACGAAGCATAGCCGGGTGCACTC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCGATGGGTCCGCTCGTaGTTCCTCAGGCTCGACGAC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGRWVRS*FLRLDD
Trigger: GTCGTCGAGCCTGAGGAAGCACGAGCGGACCCATCG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGGGTGTGAGCGCTCGTaGCGACGCAGCAGCGTCATT +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGGCERS*RRSSVI
Trigger: AATGACGCTGCTGCGTCGGCACGAGCGCTCACACCC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCGTGGCGCGCTGCCCTaGGCGCGTTTGGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGRGALP*ARLEMS
Trigger: AGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCCACATGCGTTACAGTaGAAGGGGCGCTCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGPHALQ*KGRSPE
Trigger: CTCGGGGGAGCGCCCCTTCCACTGTAACGCATGTGG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGACCCAGACGTGGGCCTaGCCTGAAGGTCTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGTQTWA*PEGLQA
Trigger: CGCTTGGAGACCTTCAGGCCAGGCCCACGTCTGGGT...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535577.5
ENST00000539836.3
CDS-3UTR TCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCACGCTGGTGGATCTTaGGCTTGGAGAGCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGHAGGS*AWRARH
Trigger: ATGGCGCGCTCTCCAAGCTCAAGATCCACCAGCGTG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGGTTGCGGAGGTCCTTaGGCTCCGCATAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGGCGGP*APHRLC
Trigger: GCAAAGCCTATGCGGAGCTCAAGGACCTCCGCAACC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCACATTGCAGGCACTTaGACGGCCGGTCGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGHIAGT*TAGRLC
Trigger: ACACAGGCGACCGGCCGTTCAAGTGCCTGCAATGTG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCTCTTCAGAGCAGTCTaGCGGCCCATGTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGLFRAV*RPMCGS
Trigger: GCTGCCACACATGGGCCGGCAGACTGCTCTGAAGAG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGGTCAGAGAAGCTCTTaGCGCACTGGGTGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGGQRSS*RTGCRG
Trigger: TCCCCTGCACCCAGTGCGGCAAGAGCTTCTCTGACC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCGAGGAGCCGAGAGTTaGAGAAACCCGGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGRGAES*RNPELL
Trigger: GAGGAGCTCCGGGTTTCTGCAACTCTCGGCTCCTCG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGTGTGGGACCGCTCATaGTTGCGGAGGTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGVWDRS*LRRSLS
Trigger: GCTCAAGGACCTCCGCAACCATGAGCGGTCCCACAC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGCCTCACTGCTTCGATaGGTCCGCTCGTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGASLLR*VRSCFL
Trigger: GAGGAAGCACGAGCGGACCCATCGAAGCAGTGAGGC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGAGTGTACCCAGACGTaGGCCTGGCCTGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGECTQT*AWPEGL
Trigger: GAGACCTTCAGGCCAGGCCCACGTCTGGGTACACTC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535577.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGTCATGCCCACCACCTaGCACTGTGTGGCCATCACA +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGVMPTT*HCVAIT
Trigger: TGTGATGGCCACACAGTGGCAGGTGGTGGGCATGAC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGGGTGCGTTCATGCTTaGGCAAGTCGCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGGCVHA*ASRWHS
Trigger: TGAGTGCCAGCGACTTGCGCAAGCATGAACGCACCC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCCCACACATCCTTCCTaGCCAGCATTCCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGPTHPS*PAFLAL
Trigger: CAGAGCCAGGAATGCTGGGCAGGAAGGATGTGTGGG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426488.6
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCGCCTTGTGTTAGTCTaGGGCCAGGTCACCGGCAAT +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGRLVLV*GQVTGN
Trigger: ATTGCCGGTGACCTGGCCCCAGACTAACACAAGGCG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCCGTCTTGTAGGCCTTaGGGCATAGCGGACACGCAT +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGPSCRP*GIADTH
Trigger: ATGCGTGTCCGCTATGCCCCAAGGCCTACAAGACGG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCCCAGCTCTCTTAGCTaGCCGACAGGGGAGCTAGTT +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGPSSLS*PTGELV
Trigger: AACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCCCACTGGCTTCCTCTaGCTTAGCTTCTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGPTGFL*LSFCLW
Trigger: CCAGAGACAGAAGCTAAGGCAGAGGAAGCCAGTGGG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGTCTTGGCATTCCACATaGTCCACCGTCATGCCCACC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGSWHST*STVMPT
Trigger: GGTGGGCATGACGGTGGAGCATGTGGAATGCCAAGA...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCCGCACTTCTCGCAGTaGTATGGCTTCACCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGPHFSQ*YGFTPS
Trigger: TGAAGGGGTGAAGCCATACCACTGCGAGAAGTGCGG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCGGACACCAGCATCTTaGCATTCCACATGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGRTPAS*HSTCST
Trigger: GGTGGAGCATGTGGAATGCCAAGATGCTGGTGTCCG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCACTCAAGAAGGCCTTaGGACAATGGGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGHSRRP*DNGGRC
Trigger: ACACCTGCCCCCATTGTCCCAAGGCCTTCTTGAGTG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCAAAGGCTTGCAAGATaGCGTTCTCTAGGACCGCGG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGQRLAR*RSLGPR
Trigger: CCGCGGTCCTAGAGAACGCCATCTTGCAAGCCTTTG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR TCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGTGCTTGCGGAACACTaGAGGGTCAGCAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGVLAEH*RVSKAL
Trigger: AAGAGCTTTGCTGACCCTTCAGTGTTCCGCAAGCAC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGAACGTCTTGTCACATTaGAGGCACTTGAACGGCCGG +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGNVLSH*RHLNGR
Trigger: CCGGCCGTTCAAGTGCCTGCAATGTGACAAGACGTT...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGTGCCCTGGGCGCGTTTaGAAATGTCTTGGTACAGGA +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGCPGRV*KCLGTG
Trigger: TCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCA...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGCAGCAGCGTCATTGTaGAGAAGGTCTCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGAAASL*RRSPCT
Trigger: AGTGCAAGGAGACCTTCTCCACAATGACGCTGCTGC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCTTTCCTCCTCTGGATaGTTAGTCCTCAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGLSSSG*LVLRDS
Trigger: GCTGTCTCTGAGGACTAACCATCCAGAGGAGGAAAG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535577.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGGCACACGGGCTGCATaGAGCGGCGGCCGCACTCGG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSGTRAA*SGGRTR
Trigger: CCGAGTGCGGCCGCCGCTTCATGCAGCCCGTGTGCC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGCCGCAGGCCAGCGTaGGTACGCCGGTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGRRPA*VRRCLR
Trigger: CCGCAAGCACCGGCGTACTCACGCTGGCCTGCGGCC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCCGGAGCTCCGGGTGTaGGCGCTCGTGCCGACGCAG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQPELRV*ALVPTQ
Trigger: CTGCGTCGGCACGAGCGCTCACACCCGGAGCTCCGG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCGGCGCCTGGGATCTTaGAGCGCGGGCCACGCGACC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQRRLGS*SAGHAT
Trigger: GGTCGCGTGGCCCGCGCTGCAAGATCCCAGGCGCCG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCGGCGCCTGGGATCTTaGAGCGCGGGCCACGCGACC +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSRRLGS*SAGHAT
Trigger: GGTCGCGTGGCCCGCGCTGCAAGATCCCAGGCGCCG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCTGCCGGCCCATGTGTaGCAGCGTGGCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSLPAHV*QRGALP
Trigger: GGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCTGCCGGCCCATGTGTaGCAGCGTGGCGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQLPAHV*QRGALP
Trigger: GGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGTGTGGCTGCGCCCGTaGCTGCGCAGCTCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQVWLRP*LRSSGA
Trigger: GGCACCCGAGCTGCGCAGCCACGGGCGCAGCCACAC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGCCCCCGATGGGGGCTaGGCTCCCGGAGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQAPDGG*APGVWC
Trigger: GCACCACACTCCGGGAGCCCAGCCCCCATCGGGGGC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCGCGCGGGCCGAGCCTaGGTGTCCGCAGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQRAGRA*VSAAQN
Trigger: GTTCTGGGCTGCGGACACCCAGGCTCGGCCCGCGCG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGATTGAAGAAAGGAGTTaGACCAAGTGTCCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGIEERS*TKCPQS
Trigger: GCTCTGCGGACACTTGGTCCAACTCCTTTCTTCAAT...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426488.6
ENST00000539836.3
CDS-3UTR TCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGCACACGGGCTGCATaGAGCGGCGGCCGCACTCGG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGTRAA*SGGRTR
Trigger: CCGAGTGCGGCCGCCGCTTCATGCAGCCCGTGTGCC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGCCGCAGGCCAGCGTaGGTACGCCGGTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGRRPA*VRRCLR
Trigger: CCGCAAGCACCGGCGTACTCACGCTGGCCTGCGGCC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCCAGCGCGTGCCGCTTaGGGTCCCAGGACGCCACGA +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSPARAA*GPRTPR
Trigger: TCGTGGCGTCCTGGGACCTCAAGCGGCACGCGCTGG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCCAGCGCGTGCCGCTTaGGGTCCCAGGACGCCACGA +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQPARAA*GPRTPR
Trigger: TCGTGGCGTCCTGGGACCTCAAGCGGCACGCGCTGG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTGCTGCCGGGGCGGCTaGACTCTCACCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSCCRGG*TLTCHA
Trigger: GGCGTGGCAGGTGAGAGTTCAGCCGCCCCGGCAGCA...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTCTCCCCCGTGTGGCTaGGCCCGTGGCTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQSPPCG*ARGCAA
Trigger: AGCTGCGCAGCCACGGGCGCAGCCACACGGGGGAGA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTCTCCCCCGTGTGGCTaGGCCCGTGGCTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSSPPCG*ARGCAA
Trigger: AGCTGCGCAGCCACGGGCGCAGCCACACGGGGGAGA...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCGCAGGCACACGGGCTaGATGAAGCGGCGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQRRHTG*MKRRPH
Trigger: GTGCGGCCGCCGCTTCATGCAGCCCGTGTGCCTGCG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCGGCAGTTCGCCAGCGTaGGAGGCCAGGTGCACGCGC +
Preference number: 4 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLGSSPA*EARCTR
Trigger: GCGCGTGCACCTGGCCTCGCACGCTGGCGAACTGCC...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGGCCGGTCGCCTGTGTaGACACGCCGGTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSGRSPV*TRRCMA
Trigger: GGCCATGCACCGGCGTGTGCACACAGGCGACCGGCC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGCCGGTCGCCTGTGTaGACACGCCGGTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGRSPV*TRRCMA
Trigger: GGCCATGCACCGGCGTGTGCACACAGGCGACCGGCC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGGCCGCTGGCCAGAGTaGACCAGCGCGTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSGRWPE*TSACRL
Trigger: CAAGCGGCACGCGCTGGTGCACTCTGGCCAGCGGCC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGCCGCTGGCCAGAGTaGACCAGCGCGTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGRWPE*TSACRL
Trigger: CAAGCGGCACGCGCTGGTGCACTCTGGCCAGCGGCC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGTGTGGCTGCGCCCGTaGCTGCGCAGCTCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFVWLRP*LRSSGA
Trigger: GGCACCCGAGCTGCGCAGCCACGGGCGCAGCCACAC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGGCGCTCGCCGGTGTaGGACCGCTCATGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGRSPV*DRSWLR
Trigger: CCGCAACCATGAGCGGTCCCACACCGGCGAGCGCCC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGCACACGCCGGTGCATaGCCAGGTCCGCCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFAHAGA*PGPPAA
Trigger: GGCAGCCGGCGGACCTGGCCATGCACCGGCGTGTGC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCTAGGACCGCGGGAGTaGTGGCCGGGCCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSLGPRE*WPGLSR
Trigger: CCTGCTGAGGCCCGGCCACCACTCCCGCGGTCCTAG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGACGCCAGGCAGGCTaGCGGTATACGCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGRQAG*RYTPAL
Trigger: CAAGGCGGGCGTATACCGTCAGCCTGCCTGGCGTCC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR TCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGCACACGGGCTGCATaGAGCGGCGGCCGCACTCGG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGTRAA*SGGRTR
Trigger: CCGAGTGCGGCCGCCGCTTCATGCAGCCCGTGTGCC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGCCGCAGGCCAGCGTaGGTACGCCGGTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGRRPA*VRRCLR
Trigger: CCGCAAGCACCGGCGTACTCACGCTGGCCTGCGGCC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCCAGCGCGTGCCGCTTaGGGTCCCAGGACGCCACGA +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFPARAA*GPRTPR
Trigger: TCGTGGCGTCCTGGGACCTCAAGCGGCACGCGCTGG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCCCGGCTATGCTTCGTaGGGCTGGCACGCTCGGCGA +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQPGYAS*GWHARR
Trigger: TCGCCGAGCGTGCCAGCCTCACGAAGCATAGCCGGG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCCCCGGCTATGCTTCGTaGGGCTGGCACGCTCGGCGA +
Preference number: 4 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLPGYAS*GWHARR
Trigger: TCGCCGAGCGTGCCAGCCTCACGAAGCATAGCCGGG...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCCCGGCTATGCTTCGTaGGGCTGGCACGCTCGGCGA +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSPGYAS*GWHARR
Trigger: TCGCCGAGCGTGCCAGCCTCACGAAGCATAGCCGGG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR TCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTGCCGGGGCGGCTaGACTCTCACCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFCCRGG*TLTCHA
Trigger: GGCGTGGCAGGTGAGAGTTCAGCCGCCCCGGCAGCA...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCCGGAGCTCCGGGTGTaGGCGCTCGTGCCGACGCAG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCPELRV*ALVPTQ
Trigger: CTGCGTCGGCACGAGCGCTCACACCCGGAGCTCCGG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGACGTGGGCCTGGCCTaGAGGTCTCCAAGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQDVGLA*RSPSAQ
Trigger: CTGGGCGCTTGGAGACCTTCAGGCCAGGCCCACGTC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535577.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCACGGAGCCCGGACCCTaGCAAACAGGGGCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFTEPGP*QTGAGA
Trigger: AGCGCCGGCCCCTGTTTGGCAGGGTCCGGGCTCCGT...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGCAGCGTGGCGCGCTaGCCTGGGCGCGTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGSVAR*PGRVWK
Trigger: TTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTCTCCCCCGTGTGGCTaGGCCCGTGGCTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFSPPCG*ARGCAA
Trigger: AGCTGCGCAGCCACGGGCGCAGCCACACGGGGGAGA...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCGCAGGCACACGGGCTaGATGAAGCGGCGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFRRHTG*MKRRPH
Trigger: GTGCGGCCGCCGCTTCATGCAGCCCGTGTGCCTGCG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGCAGTTCGCCAGCGTaGGAGGCCAGGTGCACGCGC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGSSPA*EARCTR
Trigger: GCGCGTGCACCTGGCCTCGCACGCTGGCGAACTGCC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGTGTGCACACGCCGGTaGATGGCCAGGTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFVCTRR*MARSAG
Trigger: GCCGGCGGACCTGGCCATGCACCGGCGTGTGCACAC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGCCGGTCGCCTGTGTaGACACGCCGGTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGRSPV*TRRCMA
Trigger: GGCCATGCACCGGCGTGTGCACACAGGCGACCGGCC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGGGCGCTCCCCCGAGTaGACCCGGCTATGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSGRSPE*TRLCFV
Trigger: CACGAAGCATAGCCGGGTGCACTCGGGGGAGCGCCC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR GCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGAGTGTCCAAGAACTATaGCAGGATAAAGAGTGTACC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGSVQEL*QDKECT
Trigger: GGTACACTCTTTATCCTGGCATAGTTCTTGGACACT...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535577.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCTTGTAGCCGGGGGCTaGGGACCGGGCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFLVAGG*GPGLCS
Trigger: GCTGCAGAGGCCCGGTCCCCAGCCCCCGGCTACAAG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGGCGCTCGCCGGTGTaGGACCGCTCATGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGRSPV*DRSWLR
Trigger: CCGCAACCATGAGCGGTCCCACACCGGCGAGCGCCC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTCATGGGCGCGCTGGTaGCGACGGAAGCTCGAGGGG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQSWARW*RRKLEG
Trigger: CCCCTCGAGCTTCCGTCGCCACCAGCGCGCCCATGA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCGGCTTCACCCCTTCATaGGCGCGCTGGTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLGFTPS*ARWWRR
Trigger: CCGTCGCCACCAGCGCGCCCATGAAGGGGTGAAGCC...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGGCTTCACCCCTTCATaGGCGCGCTGGTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSGFTPS*ARWWRR
Trigger: CCGTCGCCACCAGCGCGCCCATGAAGGGGTGAAGCC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGCTTCACCCCTTCATaGGCGCGCTGGTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGFTPS*ARWWRR
Trigger: CCGTCGCCACCAGCGCGCCCATGAAGGGGTGAAGCC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGCACACGCCGGTGCATaGCCAGGTCCGCCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCAHAGA*PGPPAA
Trigger: GGCAGCCGGCGGACCTGGCCATGCACCGGCGTGTGC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGACAGGAAGCCCCCGATaGGGGCTGGGCTCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQTGSPR*GLGSRS
Trigger: ACTCCGGGAGCCCAGCCCCCATCGGGGGCTTCCTGT...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCGCGCGGGCCGAGCCTaGGTGTCCGCAGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCRAGRA*VSAAQN
Trigger: GTTCTGGGCTGCGGACACCCAGGCTCGGCCCGCGCG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTGCGCTGGTGGCACGTaGGCGAGGATGAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSCAGGT*ARMSGR
Trigger: TCTCCCGCTCATCCTCGCTCACGTGCCACCAGCGCA...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR TCA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCTGCGCTGGTGGCACGTaGGCGAGGATGAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLCAGGT*ARMSGR
Trigger: TCTCCCGCTCATCCTCGCTCACGTGCCACCAGCGCA...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR TCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCCAGCGCGTGCCGCTTaGGGTCCCAGGACGCCACGA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCPARAA*GPRTPR
Trigger: TCGTGGCGTCCTGGGACCTCAAGCGGCACGCGCTGG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCCCGGCTATGCTTCGTaGGGCTGGCACGCTCGGCGA +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFPGYAS*GWHARR
Trigger: TCGCCGAGCGTGCCAGCCTCACGAAGCATAGCCGGG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTGCTGCCGGGGCGGCTaGACTCTCACCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCCCRGG*TLTCHA
Trigger: GGCGTGGCAGGTGAGAGTTCAGCCGCCCCGGCAGCA...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGGTGTAGGGGCGCACTaGGCTGTGAGTGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSGVGAH*AVSAAV
Trigger: CACAGCCGCACTCACAGCTCAGTGCGCCCCTACACC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGTGTAGGGGCGCACTaGGCTGTGAGTGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGVGAH*AVSAAV
Trigger: CACAGCCGCACTCACAGCTCAGTGCGCCCCTACACC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGCTGCGCAGCTCGGGTaGCGTCTTGTAGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSAAQLG*RLVGLG
Trigger: CCCAAGGCCTACAAGACGGCACCCGAGCTGCGCAGC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCGCAGGCACACGGGCTaGATGAAGCGGCGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCRRHTG*MKRRPH
Trigger: GTGCGGCCGCCGCTTCATGCAGCCCGTGTGCCTGCG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGCAGTTCGCCAGCGTaGGAGGCCAGGTGCACGCGC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGSSPA*EARCTR
Trigger: GCGCGTGCACCTGGCCTCGCACGCTGGCGAACTGCC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTCTCCCCCGAGTGCGTaGGCTCGTGGCTCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQSPPSA*ARGSGR
Trigger: CCTACCAGAGCCACGAGCGCACGCACTCGGGGGAGA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCAGGGGTCGGAGAACATaGGGCCGCAGCGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFRGRRT*GRSAGT
Trigger: TGTGCCCGCGCTGCGGCCGCATGTTCTCCGACCCCT...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGTGTGCACACGCCGGTaGATGGCCAGGTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCVCTRR*MARSAG
Trigger: GCCGGCGGACCTGGCCATGCACCGGCGTGTGCACAC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGCCGCTGGCCAGAGTaGACCAGCGCGTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGRWPE*TSACRL
Trigger: CAAGCGGCACGCGCTGGTGCACTCTGGCCAGCGGCC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGGCGCTCCCCCGAGTaGACCCGGCTATGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGRSPE*TRLCFV
Trigger: CACGAAGCATAGCCGGGTGCACTCGGGGGAGCGCCC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCACCCGCGGCCTCACTaGTTCGATGGGTCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSHPRPH*FDGSAR
Trigger: ACGAGCGGACCCATCGAAGCAGTGAGGCCGCGGGTG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGAGTGCGGCTGTGTTTaGGCAGCCCAGCCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQECGCV*AAQPGQ
Trigger: CTGACCGGGCTGGGCTGCGCAAACACAGCCGCACTC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGGCGCTCGCCGGTGTaGGACCGCTCATGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGRSPV*DRSWLR
Trigger: CCGCAACCATGAGCGGTCCCACACCGGCGAGCGCCC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGCTTCTGTGCCGCGTaGATGCGCTGGTGGCACGTG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGFCAA*MRWWHV
Trigger: CACGTGCCACCAGCGCATCCACGCGGCACAGAAGCC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTCATGGGCGCGCTGGTaGCGACGGAAGCTCGAGGGG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFSWARW*RRKLEG
Trigger: CCCCTCGAGCTTCCGTCGCCACCAGCGCGCCCATGA...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCCTTCATGGGCGCGCTaGTGGCGACGGAAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSPSWAR*WRRKLE
Trigger: CTCGAGCTTCCGTCGCCACCAGCGCGCCCATGAAGG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGCTTCACCCCTTCATaGGCGCGCTGGTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGFTPS*ARWWRR
Trigger: CCGTCGCCACCAGCGCGCCCATGAAGGGGTGAAGCC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCCCGGAGTGTGGTGCTaGGGGGTCATGGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQPGVWC*GVMGFR
Trigger: CCTGAAGCCCATGACCCCCCAGCACCACACTCCGGG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCCCCGGAGTGTGGTGCTaGGGGGTCATGGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLPGVWC*GVMGFR
Trigger: CCTGAAGCCCATGACCCCCCAGCACCACACTCCGGG...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCACAGGAAGCCCCCGATaGGGGCTGGGCTCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFTGSPR*GLGSRS
Trigger: ACTCCGGGAGCCCAGCCCCCATCGGGGGCTTCCTGT...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGAGTTTGAAGGGCGGTaGGGCCTACGAAGCGCGCCG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQEFEGR*GLRSAP
Trigger: CGGCGCGCTTCGTAGGCCCCACCGCCCTTCAAACTC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR TCA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCGCACGTGAGCGAGGATaGGCGGGAGAAGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLARERG*AGEALP
Trigger: GGGAAGAGCTTCTCCCGCTCATCCTCGCTCACGTGC...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGCACGTGAGCGAGGATaGGCGGGAGAAGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQARERG*AGEALP
Trigger: GGGAAGAGCTTCTCCCGCTCATCCTCGCTCACGTGC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGCTGGTGGCACGTaGGCGAGGATGAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFCAGGT*ARMSGR
Trigger: TCTCCCGCTCATCCTCGCTCACGTGCCACCAGCGCA...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGTGTAGGGGCGCACTaGGCTGTGAGTGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGVGAH*AVSAAV
Trigger: CACAGCCGCACTCACAGCTCAGTGCGCCCCTACACC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGACGTGGGCCTGGCCTaGAGGTCTCCAAGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCDVGLA*RSPSAQ
Trigger: CTGGGCGCTTGGAGACCTTCAGGCCAGGCCCACGTC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535577.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGCAGCGTGGCGCGCTaGCCTGGGCGCGTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGSVAR*PGRVWK
Trigger: TTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGCTGCGCAGCTCGGGTaGCGTCTTGTAGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFAAQLG*RLVGLG
Trigger: CCCAAGGCCTACAAGACGGCACCCGAGCTGCGCAGC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTCTCCCCCGAGTGCGTaGGCTCGTGGCTCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFSPPSA*ARGSGR
Trigger: CCTACCAGAGCCACGAGCGCACGCACTCGGGGGAGA...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGAGTGCACCCGGCTATaGTTCGTGAGGCTGGCACGC +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSECTRL*FVRLAR
Trigger: GCGTGCCAGCCTCACGAAGCATAGCCGGGTGCACTC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGAGTGCACCCGGCTATaGTTCGTGAGGCTGGCACGC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQECTRL*FVRLAR
Trigger: GCGTGCCAGCCTCACGAAGCATAGCCGGGTGCACTC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGGCGCTCCCCCGAGTaGACCCGGCTATGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGRSPE*TRLCFV
Trigger: CACGAAGCATAGCCGGGTGCACTCGGGGGAGCGCCC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCGATGGGTCCGCTCGTaGTTCCTCAGGCTCGACGAC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQRWVRS*FLRLDD
Trigger: GTCGTCGAGCCTGAGGAAGCACGAGCGGACCCATCG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCACCCGCGGCCTCACTaGTTCGATGGGTCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFHPRPH*FDGSAR
Trigger: ACGAGCGGACCCATCGAAGCAGTGAGGCCGCGGGTG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGGGTGTGAGCGCTCGTaGCGACGCAGCAGCGTCATT +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSGCERS*RRSSVI
Trigger: AATGACGCTGCTGCGTCGGCACGAGCGCTCACACCC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGAGTGCGGCTGTGTTTaGGCAGCCCAGCCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFECGCV*AAQPGQ
Trigger: CTGACCGGGCTGGGCTGCGCAAACACAGCCGCACTC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGTTTAATAGCAAGGAGTaGGTTTCACGAAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGFNSKE*VSRSFL
Trigger: GAGAAAACTTCGTGAAACCCACTCCTTGCTATTAAA...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCGTGGCGCGCTGCCCTaGGCGCGTTTGGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSRGALP*ARLEMS
Trigger: AGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGCTTCTGTGCCGCGTaGATGCGCTGGTGGCACGTG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGFCAA*MRWWHV
Trigger: CACGTGCCACCAGCGCATCCACGCGGCACAGAAGCC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCCTTCATGGGCGCGCTaGTGGCGACGGAAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFPSWAR*WRRKLE
Trigger: CTCGAGCTTCCGTCGCCACCAGCGCGCCCATGAAGG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGCTTCACCCCTTCATaGGCGCGCTGGTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGFTPS*ARWWRR
Trigger: CCGTCGCCACCAGCGCGCCCATGAAGGGGTGAAGCC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCCACATGCGTTACAGTaGAAGGGGCGCTCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQPHALQ*KGRSPE
Trigger: CTCGGGGGAGCGCCCCTTCCACTGTAACGCATGTGG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCCCGGAGTGTGGTGCTaGGGGGTCATGGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFPGVWC*GVMGFR
Trigger: CCTGAAGCCCATGACCCCCCAGCACCACACTCCGGG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCACGCTGGTGGATCTTaGGCTTGGAGAGCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSHAGGS*AWRARH
Trigger: ATGGCGCGCTCTCCAAGCTCAAGATCCACCAGCGTG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGTTGCGGAGGTCCTTaGGCTCCGCATAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGCGGP*APHRLC
Trigger: GCAAAGCCTATGCGGAGCTCAAGGACCTCCGCAACC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTGCGCTGGTGGCACGTaGGCGAGGATGAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCCAGGT*ARMSGR
Trigger: TCTCCCGCTCATCCTCGCTCACGTGCCACCAGCGCA...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCACATTGCAGGCACTTaGACGGCCGGTCGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSHIAGT*TAGRLC
Trigger: ACACAGGCGACCGGCCGTTCAAGTGCCTGCAATGTG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCACATTGCAGGCACTTaGACGGCCGGTCGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQHIAGT*TAGRLC
Trigger: ACACAGGCGACCGGCCGTTCAAGTGCCTGCAATGTG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCCACATTGCAGGCACTTaGACGGCCGGTCGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLHIAGT*TAGRLC
Trigger: ACACAGGCGACCGGCCGTTCAAGTGCCTGCAATGTG...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR TCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGTGTAGGGGCGCACTaGGCTGTGAGTGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGVGAH*AVSAAV
Trigger: CACAGCCGCACTCACAGCTCAGTGCGCCCCTACACC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCTCTTCAGAGCAGTCTaGCGGCCCATGTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQLFRAV*RPMCGS
Trigger: GCTGCCACACATGGGCCGGCAGACTGCTCTGAAGAG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTCTCCCCCGAGTGCGTaGGCTCGTGGCTCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCSPPSA*ARGSGR
Trigger: CCTACCAGAGCCACGAGCGCACGCACTCGGGGGAGA...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGCTGCCGGAAGTCCTTaGCGCACTTCTCGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQAAGSP*RTSRSG
Trigger: ACCACTGCGAGAAGTGCGGCAAGGACTTCCGGCAGC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCGATGGGTCCGCTCGTaGTTCCTCAGGCTCGACGAC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFRWVRS*FLRLDD
Trigger: GTCGTCGAGCCTGAGGAAGCACGAGCGGACCCATCG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCACCCGCGGCCTCACTaGTTCGATGGGTCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCHPRPH*FDGSAR
Trigger: ACGAGCGGACCCATCGAAGCAGTGAGGCCGCGGGTG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGGTGTGAGCGCTCGTaGCGACGCAGCAGCGTCATT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGCERS*RRSSVI
Trigger: AATGACGCTGCTGCGTCGGCACGAGCGCTCACACCC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGTCAGAGAAGCTCTTaGCGCACTGGGTGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGQRSS*RTGCRG
Trigger: TCCCCTGCACCCAGTGCGGCAAGAGCTTCTCTGACC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGAGTGCGGCTGTGTTTaGGCAGCCCAGCCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCECGCV*AAQPGQ
Trigger: CTGACCGGGCTGGGCTGCGCAAACACAGCCGCACTC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGGTGGGTGCGTTCATaGTTGCGCAAGTCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGWVRS*LRKSLA
Trigger: TGCCAGCGACTTGCGCAAGCATGAACGCACCCACCC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCTTGTGCTGACTCCGTaGCGTCGGCGTCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCLVLTP*RRRRLL
Trigger: GAGGAGCCGACGCCGACGCCACGGAGTCAGCACAAG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCGTGGCGCGCTGCCCTaGGCGCGTTTGGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFRGALP*ARLEMS
Trigger: AGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGTGTGGGACCGCTCATaGTTGCGGAGGTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSVWDRS*LRRSLS
Trigger: GCTCAAGGACCTCCGCAACCATGAGCGGTCCCACAC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGCTTCTGTGCCGCGTaGATGCGCTGGTGGCACGTG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGFCAA*MRWWHV
Trigger: CACGTGCCACCAGCGCATCCACGCGGCACAGAAGCC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCCACATGCGTTACAGTaGAAGGGGCGCTCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFPHALQ*KGRSPE
Trigger: CTCGGGGGAGCGCCCCTTCCACTGTAACGCATGTGG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGCCTCACTGCTTCGATaGGTCCGCTCGTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSASLLR*VRSCFL
Trigger: GAGGAAGCACGAGCGGACCCATCGAAGCAGTGAGGC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCCCGGAGTGTGGTGCTaGGGGGTCATGGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCPGVWC*GVMGFR
Trigger: CCTGAAGCCCATGACCCCCCAGCACCACACTCCGGG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCGAGTGTACCCAGACGTaGGCCTGGCCTGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLECTQT*AWPEGL
Trigger: GAGACCTTCAGGCCAGGCCCACGTCTGGGTACACTC...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR TCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCACGCTGGTGGATCTTaGGCTTGGAGAGCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFHAGGS*AWRARH
Trigger: ATGGCGCGCTCTCCAAGCTCAAGATCCACCAGCGTG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGCACGTGAGCGAGGATaGGCGGGAGAAGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCARERG*AGEALP
Trigger: GGGAAGAGCTTCTCCCGCTCATCCTCGCTCACGTGC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCACATTGCAGGCACTTaGACGGCCGGTCGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFHIAGT*TAGRLC
Trigger: ACACAGGCGACCGGCCGTTCAAGTGCCTGCAATGTG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGAGGGGAGCTAGTTGCTaGGGGGTAGGGATCTGGAGT +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQRGASC*GVGIWS
Trigger: ACTCCAGATCCCTACCCCTCAGCAACTAGCTCCCCT...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGACGGAAGGCCGAATaGGGGACAAAGGCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGRKAE*GTKACK
Trigger: CTTGCAAGCCTTTGTCCCTCATTCGGCCTTCCGTCC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGGACGGAAGGCCGAATaGGGGACAAAGGCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSGRKAE*GTKACK
Trigger: CTTGCAAGCCTTTGTCCCTCATTCGGCCTTCCGTCC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCTCTTCAGAGCAGTCTaGCGGCCCATGTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFLFRAV*RPMCGS
Trigger: GCTGCCACACATGGGCCGGCAGACTGCTCTGAAGAG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGAGTACGCCGGTGCTTaGGGAACACTGAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSEYAGA*GTLKGQ
Trigger: CTGACCCTTCAGTGTTCCGCAAGCACCGGCGTACTC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGAGTACGCCGGTGCTTaGGGAACACTGAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQEYAGA*GTLKGQ
Trigger: CTGACCCTTCAGTGTTCCGCAAGCACCGGCGTACTC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGCTCCGCATAGGCTTTaGCGCAACGCTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQAPHRL*RNAHSC
Trigger: ACAGCTGTGAGCGTTGCGGCAAAGCCTATGCGGAGC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGCTGCCGGAAGTCCTTaGCGCACTTCTCGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFAAGSP*RTSRSG
Trigger: ACCACTGCGAGAAGTGCGGCAAGGACTTCCGGCAGC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGAGTGCACCCGGCTATaGTTCGTGAGGCTGGCACGC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCECTRL*FVRLAR
Trigger: GCGTGCCAGCCTCACGAAGCATAGCCGGGTGCACTC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCGATGGGTCCGCTCGTaGTTCCTCAGGCTCGACGAC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCRWVRS*FLRLDD
Trigger: GTCGTCGAGCCTGAGGAAGCACGAGCGGACCCATCG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGTCATGCCCACCACCTaGCACTGTGTGGCCATCACA +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQVMPTT*HCVAIT
Trigger: TGTGATGGCCACACAGTGGCAGGTGGTGGGCATGAC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGGGTGCGTTCATGCTTaGGCAAGTCGCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSGCVHA*ASRWHS
Trigger: TGAGTGCCAGCGACTTGCGCAAGCATGAACGCACCC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGGTGGGTGCGTTCATaGTTGCGCAAGTCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGWVRS*LRKSLA
Trigger: TGCCAGCGACTTGCGCAAGCATGAACGCACCCACCC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCGTGGCGCGCTGCCCTaGGCGCGTTTGGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCRGALP*ARLEMS
Trigger: AGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGTGTGGCCACGCTGGTaGATCTTGAGCTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQVWPRW*ILSLES
Trigger: GCTCTCCAAGCTCAAGATCCACCAGCGTGGCCACAC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGTGTGGGACCGCTCATaGTTGCGGAGGTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFVWDRS*LRRSLS
Trigger: GCTCAAGGACCTCCGCAACCATGAGCGGTCCCACAC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCCACATGCGTTACAGTaGAAGGGGCGCTCCCCCGAG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCPHALQ*KGRSPE
Trigger: CTCGGGGGAGCGCCCCTTCCACTGTAACGCATGTGG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGCCTCACTGCTTCGATaGGTCCGCTCGTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFASLLR*VRSCFL
Trigger: GAGGAAGCACGAGCGGACCCATCGAAGCAGTGAGGC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCCACCTGCCACTGTGTaGCCATCACACCACCTGACT +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQPPATV*PSHHLT
Trigger: AGTCAGGTGGTGTGATGGCCACACAGTGGCAGGTGG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGCCCCACGCCGCTCTaGACCTCAGTTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGPTPL*TSVSSS
Trigger: TGATGAGGAAACTGAGGTCCAGAGCGGCGTGGGGCC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTGTCCGCAGAGCCACTaGGACCAGAAAAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQCPQSH*DQKRAE
Trigger: CTCAGCCCTTTTCTGGTCCCAGTGGCTCTGCGGACA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426488.6
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCACCCAGACGTGGGCCTaGCCTGAAGGTCTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCTQTWA*PEGLQA
Trigger: CGCTTGGAGACCTTCAGGCCAGGCCCACGTCTGGGT...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535577.5
ENST00000539836.3
CDS-3UTR TCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGTTGCGGAGGTCCTTaGGCTCCGCATAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGCGGP*APHRLC
Trigger: GCAAAGCCTATGCGGAGCTCAAGGACCTCCGCAACC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCAAGTTTGTGGGAGTTTaGAGGGCGGTGGGGCCTACG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFKFVGV*RAVGPT
Trigger: CGTAGGCCCCACCGCCCTTCAAACTCCCACAAACTT...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCTTCCATGGCCTTGGTaGACGGGGTTTCTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSLPWPW*TGFLSE
Trigger: TTCCGAGAGAAACCCCGTTCACCAAGGCCATGGAAG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426488.6
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCTTCCATGGCCTTGGTaGACGGGGTTTCTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQLPWPW*TGFLSE
Trigger: TTCCGAGAGAAACCCCGTTCACCAAGGCCATGGAAG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426488.6
ENST00000539836.3
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCGGAACGATTCTAGCTaGTCTTGCCGGAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSRNDSS*SCRKCG
Trigger: GCCACACTTCCGGCAAGAGCAGCTAGAATCGTTCCG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCTCTTCAGAGCAGTCTaGCGGCCCATGTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCLFRAV*RPMCGS
Trigger: GCTGCCACACATGGGCCGGCAGACTGCTCTGAAGAG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCCCACTGGCTTCCTCTaGCTTAGCTTCTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQPTGFL*LSFCLW
Trigger: CCAGAGACAGAAGCTAAGGCAGAGGAAGCCAGTGGG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCCCACTGGCTTCCTCTaGCTTAGCTTCTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSPTGFL*LSFCLW
Trigger: CCAGAGACAGAAGCTAAGGCAGAGGAAGCCAGTGGG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGCTCCGCATAGGCTTTaGCGCAACGCTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFAPHRL*RNAHSC
Trigger: ACAGCTGTGAGCGTTGCGGCAAAGCCTATGCGGAGC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGTCATGCCCACCACCTaGCACTGTGTGGCCATCACA +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFVMPTT*HCVAIT
Trigger: TGTGATGGCCACACAGTGGCAGGTGGTGGGCATGAC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTCTTGGCATTCCACATaGTCCACCGTCATGCCCACC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQSWHST*STVMPT
Trigger: GGTGGGCATGACGGTGGAGCATGTGGAATGCCAAGA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGTCAGAGAAGCTCTTaGCGCACTGGGTGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGQRSS*RTGCRG
Trigger: TCCCCTGCACCCAGTGCGGCAAGAGCTTCTCTGACC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGGTGCGTTCATGCTTaGGCAAGTCGCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGCVHA*ASRWHS
Trigger: TGAGTGCCAGCGACTTGCGCAAGCATGAACGCACCC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGGTGGGTGCGTTCATaGTTGCGCAAGTCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGWVRS*LRKSLA
Trigger: TGCCAGCGACTTGCGCAAGCATGAACGCACCCACCC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCGAGGAGCCGAGAGTTaGAGAAACCCGGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCRGAES*RNPELL
Trigger: GAGGAGCTCCGGGTTTCTGCAACTCTCGGCTCCTCG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCCCACACATCCTTCCTaGCCAGCATTCCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFPTHPS*PAFLAL
Trigger: CAGAGCCAGGAATGCTGGGCAGGAAGGATGTGTGGG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426488.6
ENST00000539836.3
CDS-3UTR GCA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCACAGAATTCTGGCCTTaGACAGCTGTACGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLTEFWP*TAVRAS
Trigger: GGAGGCCCGTACAGCTGTGCAAGGCCAGAATTCTGT...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGGAACCTCCAGCCTATaGCGGCAGAGAAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSGTSSL*RQRSIL
Trigger: CAAGATGCTTCTCTGCCGCCATAGGCTGGAGGTTCC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTTCTGTCTCTGGCTTTaGCTTCACCTCGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQFCLWL*LHLGHL
Trigger: GAGGTGGCCGAGGTGAAGCCAAAGCCAGAGACAGAA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCCGTCTTGTAGGCCTTaGGGCATAGCGGACACGCAT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFPSCRP*GIADTH
Trigger: ATGCGTGTCCGCTATGCCCCAAGGCCTACAAGACGG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGTGTGGCCACGCTGGTaGATCTTGAGCTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFVWPRW*ILSLES
Trigger: GCTCTCCAAGCTCAAGATCCACCAGCGTGGCCACAC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCCGCACTTCTCGCAGTaGTATGGCTTCACCCCTTCA +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSPHFSQ*YGFTPS
Trigger: TGAAGGGGTGAAGCCATACCACTGCGAGAAGTGCGG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCCGCACTTCTCGCAGTaGTATGGCTTCACCCCTTCA +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQPHFSQ*YGFTPS
Trigger: TGAAGGGGTGAAGCCATACCACTGCGAGAAGTGCGG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGCCTCACTGCTTCGATaGGTCCGCTCGTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCASLLR*VRSCFL
Trigger: GAGGAAGCACGAGCGGACCCATCGAAGCAGTGAGGC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCCACCTGCCACTGTGTaGCCATCACACCACCTGACT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFPPATV*PSHHLT
Trigger: AGTCAGGTGGTGTGATGGCCACACAGTGGCAGGTGG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCACTCAAGAAGGCCTTaGGACAATGGGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSHSRRP*DNGGRC
Trigger: ACACCTGCCCCCATTGTCCCAAGGCCTTCTTGAGTG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCACTCAAGAAGGCCTTaGGACAATGGGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQHSRRP*DNGGRC
Trigger: ACACCTGCCCCCATTGTCCCAAGGCCTTCTTGAGTG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCAAAGGCTTGCAAGATaGCGTTCTCTAGGACCGCGG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQQRLAR*RSLGPR
Trigger: CCGCGGTCCTAGAGAACGCCATCTTGCAAGCCTTTG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTGGCTTCGGAGGACGTaGCAAGGAGGACTGAACGAA +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQWLRRT*QGGLNE
Trigger: TTCGTTCAGTCCTCCTTGCCACGTCCTCCGAAGCCA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGTGCTTGCGGAACACTaGAGGGTCAGCAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQVLAEH*RVSKAL
Trigger: AAGAGCTTTGCTGACCCTTCAGTGTTCCGCAAGCAC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGTGCTTGCGGAACACTaGAGGGTCAGCAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSVLAEH*RVSKAL
Trigger: AAGAGCTTTGCTGACCCTTCAGTGTTCCGCAAGCAC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGACCAGAAAAGGGCTaGGCCAATGGGCTAAATCTG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGPEKG*ANGLNL
Trigger: CAGATTTAGCCCATTGGCTCAGCCCTTTTCTGGTCC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426488.6
ENST00000535577.5
ENST00000539836.3
CDS-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCTTCCATGGCCTTGGTaGACGGGGTTTCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSLPWPW*TGFLIF
Trigger: GAAGATGAGAAACCCCGTTCACCAAGGCCATGGAAG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCCCACTGGCTTCCTCTaGCTTAGCTTCTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFPTGFL*LSFCLW
Trigger: CCAGAGACAGAAGCTAAGGCAGAGGAAGCCAGTGGG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGAGTACGCCGGTGCTTaGGGAACACTGAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCEYAGA*GTLKGQ
Trigger: CTGACCCTTCAGTGTTCCGCAAGCACCGGCGTACTC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGCTCCGCATAGGCTTTaGCGCAACGCTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCAPHRL*RNAHSC
Trigger: ACAGCTGTGAGCGTTGCGGCAAAGCCTATGCGGAGC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGAACGTCTTGTCACATTaGAGGCACTTGAACGGCCGG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQNVLSH*RHLNGR
Trigger: CCGGCCGTTCAAGTGCCTGCAATGTGACAAGACGTT...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGTCATGCCCACCACCTaGCACTGTGTGGCCATCACA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCVMPTT*HCVAIT
Trigger: TGTGATGGCCACACAGTGGCAGGTGGTGGGCATGAC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTTCTGTCTCTGGCTTTaGCTTCACCTCGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFFCLWL*LHLGHL
Trigger: GAGGTGGCCGAGGTGAAGCCAAAGCCAGAGACAGAA...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCCGTCTTGTAGGCCTTaGGGCATAGCGGACACGCAT +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCPSCRP*GIADTH
Trigger: ATGCGTGTCCGCTATGCCCCAAGGCCTACAAGACGG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGTGTGGCCACGCTGGTaGATCTTGAGCTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCVWPRW*ILSLES
Trigger: GCTCTCCAAGCTCAAGATCCACCAGCGTGGCCACAC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCCACCTGCCACTGTGTaGCCATCACACCACCTGACT +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCPPATV*PSHHLT
Trigger: AGTCAGGTGGTGTGATGGCCACACAGTGGCAGGTGG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCGGACACCAGCATCTTaGCATTCCACATGCTCCACC +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFRTPAS*HSTCST
Trigger: GGTGGAGCATGTGGAATGCCAAGATGCTGGTGTCCG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGCAGCAGCGTCATTGTaGAGAAGGTCTCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQAAASL*RRSPCT
Trigger: AGTGCAAGGAGACCTTCTCCACAATGACGCTGCTGC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGCAGCAGCGTCATTGTaGAGAAGGTCTCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSAAASL*RRSPCT
Trigger: AGTGCAAGGAGACCTTCTCCACAATGACGCTGCTGC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCACTCAAGAAGGCCTTaGGACAATGGGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFHSRRP*DNGGRC
Trigger: ACACCTGCCCCCATTGTCCCAAGGCCTTCTTGAGTG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGTCCCTTAAGTTTGTaGGAGTTTGAAGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGPLSL*EFEGRW
Trigger: CCACCGCCCTTCAAACTCCCACAAACTTAAGGGACC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGGTCCCTTAAGTTTGTaGGAGTTTGAAGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSGPLSL*EFEGRW
Trigger: CCACCGCCCTTCAAACTCCCACAAACTTAAGGGACC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS-3UTR TCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGTGCTTGCGGAACACTaGAGGGTCAGCAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFVLAEH*RVSKAL
Trigger: AAGAGCTTTGCTGACCCTTCAGTGTTCCGCAAGCAC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR TCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCTTCCATGGCCTTGGTaGACGGGGTTTCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQLPWPW*TGFLFP
Trigger: TGGAAAAAGAAACCCCGTTCACCAAGGCCATGGAAG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS-3UTR TCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGGACCAGAAAAGGGCTaGGCCAATGGGCTAAATCTG +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFGPEKG*ANGLNL
Trigger: CAGATTTAGCCCATTGGCTCAGCCCTTTTCTGGTCC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426488.6
ENST00000535577.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCCCACTGGCTTCCTCTaGCTTAGCTTCTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCPTGFL*LSFCLW
Trigger: CCAGAGACAGAAGCTAAGGCAGAGGAAGCCAGTGGG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTCTTGGCATTCCACATaGTCCACCGTCATGCCCACC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCSWHST*STVMPT
Trigger: GGTGGGCATGACGGTGGAGCATGTGGAATGCCAAGA...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTGGAGAAGGTCTCCTTaGACTCTCGGCACACAAACT +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQWRRSP*TLGTQT
Trigger: AGTTTGTGTGCCGAGAGTGCAAGGAGACCTTCTCCA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTGGAGAAGGTCTCCTTaGACTCTCGGCACACAAACT +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSWRRSP*TLGTQT
Trigger: AGTTTGTGTGCCGAGAGTGCAAGGAGACCTTCTCCA...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR GCA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCTGGAGAAGGTCTCCTTaGACTCTCGGCACACAAACT +
Preference number: 4 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLWRRSP*TLGTQT
Trigger: AGTTTGTGTGCCGAGAGTGCAAGGAGACCTTCTCCA...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCCTGGGCGCGTTTaGAAATGTCTTGGTACAGGA +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFCPGRV*KCLGTG
Trigger: TCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCA...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTTCTGTCTCTGGCTTTaGCTTCACCTCGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCFCLWL*LHLGHL
Trigger: GAGGTGGCCGAGGTGAAGCCAAAGCCAGAGACAGAA...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCCGCACTTCTCGCAGTaGTATGGCTTCACCCCTTCA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCPHFSQ*YGFTPS
Trigger: TGAAGGGGTGAAGCCATACCACTGCGAGAAGTGCGG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCGGACACCAGCATCTTaGCATTCCACATGCTCCACC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCRTPAS*HSTCST
Trigger: GGTGGAGCATGTGGAATGCCAAGATGCTGGTGTCCG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGCAGCAGCGTCATTGTaGAGAAGGTCTCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFAAASL*RRSPCT
Trigger: AGTGCAAGGAGACCTTCTCCACAATGACGCTGCTGC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCACTCAAGAAGGCCTTaGGACAATGGGGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCHSRRP*DNGGRC
Trigger: ACACCTGCCCCCATTGTCCCAAGGCCTTCTTGAGTG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTGGCTTCGGAGGACGTaGCAAGGAGGACTGAACGAA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCWLRRT*QGGLNE
Trigger: TTCGTTCAGTCCTCCTTGCCACGTCCTCCGAAGCCA...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCAAGCCTCAGAAAACGTaGCTTCGGAGGACGTGGCAA +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFKPQKT*LRRTWQ
Trigger: TTGCCACGTCCTCCGAAGCCACGTTTTCTGAGGCTT...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGAAAGGGCTGAGCCAATaGGCTAAATCTGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQKGLSQ*AKSGSW
Trigger: CCAGCTACCAGATTTAGCCCATTGGCTCAGCCCTTT...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426488.6
ENST00000535577.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCAAAGGGCTGAGCCAATaGGCTAAATCTGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSKGLSQ*AKSGSW
Trigger: CCAGCTACCAGATTTAGCCCATTGGCTCAGCCCTTT...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426488.6
ENST00000535577.5
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCTTTCCTCCTCTGGATaGTTAGTCCTCAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSLSSSG*LVLRDS
Trigger: GCTGTCTCTGAGGACTAACCATCCAGAGGAGGAAAG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCAGAAAAGACAGACCTaGGACCAGAAAAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQQKRQT*DQKRAE
Trigger: CTCAGCCCTTTTCTGGTCCCAGGTCTGTCTTTTCTG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535577.5
ENST00000539836.3
CDS-3UTR TCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCTTCCATGGCCTTGGTaGACGGGGTTTCTATCCTTC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCLPWPW*TGFLSF
Trigger: GAAGGATAGAAACCCCGTTCACCAAGGCCATGGAAG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394983.6
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCAACGTCTTGTCACATTaGAGGCACTTGAACGGCCGG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCNVLSH*RHLNGR
Trigger: CCGGCCGTTCAAGTGCCTGCAATGTGACAAGACGTT...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGGAGAAGGTCTCCTTaGACTCTCGGCACACAAACT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFWRRSP*TLGTQT
Trigger: AGTTTGTGTGCCGAGAGTGCAAGGAGACCTTCTCCA...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTGCCCTGGGCGCGTTTaGAAATGTCTTGGTACAGGA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCCPGRV*KCLGTG
Trigger: TCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCA...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGCAGCAGCGTCATTGTaGAGAAGGTCTCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCAAASL*RRSPCT
Trigger: AGTGCAAGGAGACCTTCTCCACAATGACGCTGCTGC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCAAGCCTCAGAAAACGTaGCTTCGGAGGACGTGGCAA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCKPQKT*LRRTWQ
Trigger: TTGCCACGTCCTCCGAAGCCACGTTTTCTGAGGCTT...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR CCA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCGCTAAATCTGGTAGCTaGCACTGTCTGGAAGTGACA +
Preference number: 4 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLAKSGS*HCLEVT
Trigger: TGTCACTTCCAGACAGTGCCAGCTACCAGATTTAGC...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR TCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCGAAGGATGAGGAGATaGACAAATGAATGGACGGAA +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSRRMRR*TNEWTE
Trigger: TTCCGTCCATTCATTTGTTCATCTCCTCATCCTTCG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS-3UTR GCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGAGGACAAAAAGGCCATaGTCAAGCTCTGCAAAACCT +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQRTKRP*SSSAKP
Trigger: AGGTTTTGCAGAGCTTGAGCATGGCCTTTTTGTCCT...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGCAGAGAAGCATCTTaGAAGAGGTCTCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGREAS*KRSLCV
Trigger: CACACACAGAGACCTCTTGCAAGATGCTTCTCTGCC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCGTTTGGAAATGTCTTaGTACAGGACAGGCACTTGT +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSRLEMS*YRTGTC
Trigger: ACAAGTGCCTGTCCTGTACCAAGACATTTCCAAACG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCGTTTGGAAATGTCTTaGTACAGGACAGGCACTTGT +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQRLEMS*YRTGTC
Trigger: ACAAGTGCCTGTCCTGTACCAAGACATTTCCAAACG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR GCA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGTGTCCAAGAACTATaGCAGGATAAAGAGTGTACC +
Preference number: 4 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLSVQEL*QDKECT
Trigger: GGTACACTCTTTATCCTGGCATAGTTCTTGGACACT...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR CCA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCGTTTGGAAATGTCTTaGTACAGGACAGGCACTTGT +
Preference number: 4 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFRLEMS*YRTGTC
Trigger: ACAAGTGCCTGTCCTGTACCAAGACATTTCCAAACG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTCCTCATCAGTAAAATaGGGTCCCTTAAGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSSSSVK*GPLSLW
Trigger: CCACAAACTTAAGGGACCCCATTTTACTGATGAGGA...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGCTAAATCTGGTAGCTaGCACTGTCTGGAAGTGACA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCAKSGS*HCLEVT
Trigger: TGTCACTTCCAGACAGTGCCAGCTACCAGATTTAGC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426488.6
ENST00000535577.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCATTGAAGAAAGGAGTTaGACCAAGTGTCCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCIEERS*TKCPQS
Trigger: GCTCTGCGGACACTTGGTCCAACTCCTTTCTTCAAT...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426488.6
ENST00000539836.3
CDS-3UTR CCA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTTTTCTTTCCTCCTCTaGATGGTTAGTCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQFSFLL*MVSPQR
Trigger: TCTCTGAGGACTAACCATCCAGAGGAGGAAAGAAAA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535577.5
ENST00000539836.3
CDS-3UTR TCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCGAAGGATGAGGAGATaGACAAATGAATGGACGGAA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCRRMRR*TNEWTE
Trigger: TTCCGTCCATTCATTTGTTCATCTCCTCATCCTTCG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTGCGCCTATTCAATATaGACCGGAACGATTCTAGCT +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCCAYSI*TGTILA
Trigger: AGCTAGAATCGTTCCGGTGCATATTGAATAGGCGCA...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR GCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGAAGTTTTCTCCATCTaGCTTGGGAAAAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCEVFSI*LGKSPP
Trigger: TGGAGGACTTTTCCCAAGGCAGATGGAGAAAACTTC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCGTTTGGAAATGTCTTaGTACAGGACAGGCACTTGT +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCRLEMS*YRTGTC
Trigger: ACAAGTGCCTGTCCTGTACCAAGACATTTCCAAACG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTCCTCATCAGTAAAATaGGGTCCCTTAAGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCSSSVK*GPLSLW
Trigger: CCACAAACTTAAGGGACCCCATTTTACTGATGAGGA...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS-3UTR CCA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTTTTCTTTCCTCCTCTaGATGGTTAGTCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCFSFLL*MVSPQR
Trigger: TCTCTGAGGACTAACCATCCAGAGGAGGAAAGAAAA...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535577.5
ENST00000539836.3
CDS CCA 90 bp CCCGGGACCACACCGCGCCGGGCCAGCAGCCGCGCGGGCCGAGCCTaGGTGTCCGCAGCCCAGAACCGCGGAGACAGCCGGCGGGTTCTA +
Preference number: 5 (lower is better)
Translates to: PGTTPRRASSRAGRA*VSAAQNRGDSRRVL
Trigger: TAGAACCCGCCGGCTGTCTCCGCGGTTCTGGGCTGCGGACACCCAGGCTCGGCCCGCGCGGCTGCTGGCCCGGCGCGGTGTGGTCCCGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS GCA 90 bp GGGCGCTCGCCGGTGTGGGACCTCGGCCACCTCTTCAGAGCAGTCTaGCGGCCCATGTGTGGCAGCGTGGCGCGCTGCCCTGGGCGCGTT +
Preference number: 5 (lower is better)
Translates to: GRSPVWDLGHLFRAV*RPMCGSVARCPGRV
Trigger: AACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAGACTGCTCTGAAGAGGTGGCCGAGGTCCCACACCGGCGAGCGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414399.1
CDS GCA 90 bp CAGTGCGCACAGCGGAAGGGCAGTTCGCCAGCGTGCGAGGCCAGGTaGACGCGCAGGCACACGGGCTGCATGAAGCGGCGGCCGCACTCG +
Preference number: 5 (lower is better)
Translates to: QCAQRKGSSPACEAR*TRRHTGCMKRRPHS
Trigger: CGAGTGCGGCCGCCGCTTCATGCAGCCCGTGTGCCTGCGCGTGCACCTGGCCTCGCACGCTGGCGAACTGCCCTTCCGCTGTGCGCACTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 90 bp GAGGGACAAAGGCTTGCAAGATGGCGTTCTCTAGGACCGCGGGAGTaGTGGCCGGGCCTCAGCAGGGGAGGGGGCCGCCGGCGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: EGQRLARWRSLGPRE*WPGLSRGGGRRRLG
Trigger: TCCCAGGCGCCGGCGGCCCCCTCCCCTGCTGAGGCCCGGCCACCACTCCCGCGGTCCTAGAGAACGCCATCTTGCAAGCCTTTGTCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS CCA 90 bp GGACAAAGGCTTGCAAGATGGCGTTCTCTAGGACCGCGGGAGTGGTaGCCGGGCCTCAGCAGGGGAGGGGGCCGCCGGCGCCTGGGATCT +
Preference number: 5 (lower is better)
Translates to: GQRLARWRSLGPREW*PGLSRGGGRRRLGS
Trigger: AGATCCCAGGCGCCGGCGGCCCCCTCCCCTGCTGAGGCCCGGCCACCACTCCCGCGGTCCTAGAGAACGCCATCTTGCAAGCCTTTGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS GCA 90 bp GCACACGCCGGTGCATGGCCAGGTCCGCCGGCTGCCGGAAGTCCTTaGCGCACTTCTCGCAGTGGTATGGCTTCACCCCTTCATGGGCGC +
Preference number: 5 (lower is better)
Translates to: AHAGAWPGPPAAGSP*RTSRSGMASPLHGR
Trigger: GCGCCCATGAAGGGGTGAAGCCATACCACTGCGAGAAGTGCGGCAAGGACTTCCGGCAGCCGGCGGACCTGGCCATGCACCGGCGTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 90 bp GGGGGCAGGTGTAGGGGCGCACTGAGCTGTGAGTGCGGCTGTGTTTaGGCAGCCCAGCCCGGTCAGAGAAGCTCTTGCCGCACTGGGTGC +
Preference number: 5 (lower is better)
Translates to: GGRCRGALSCECGCV*AAQPGQRSSCRTGC
Trigger: GCACCCAGTGCGGCAAGAGCTTCTCTGACCGGGCTGGGCTGCGCAAACACAGCCGCACTCACAGCTCAGTGCGCCCCTACACCTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 90 bp GACCAAGTGTCCGCAGAGCCACTGATGAGACTTGTGCTGACTCCGTaGCGTCGGCGTCGGCTCCTCGCACCGACGGAGCCCGGACCCTGC +
Preference number: 5 (lower is better)
Translates to: DQVSAEPLMRLVLTP*RRRRLLAPTEPGPC
Trigger: GCAGGGTCCGGGCTCCGTCGGTGCGAGGAGCCGACGCCGACGCCACGGAGTCAGCACAAGTCTCATCAGTGGCTCTGCGGACACTTGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564456.1
CDS GCA 90 bp TGTCTCTGGCTTTGGCTTCACCTCGGCCACCTCTTCAGAGCAGTCTaGCGGCCCATGTGTGGCAGCGTGGCGCGCTGCCCTGGGCGCGTT +
Preference number: 5 (lower is better)
Translates to: CLWLWLHLGHLFRAV*RPMCGSVARCPGRV
Trigger: AACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAGACTGCTCTGAAGAGGTGGCCGAGGTGAAGCCAAAGCCAGAGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 90 bp TTGAAGGGCGGTGGGGCCTACGAAGCGCGCCGAGGAGCCGAGAGTTaGAGAAACCCGGAGCTCCTCGCTCCTCGCAACCGTCTGTACGCG +
Preference number: 5 (lower is better)
Translates to: LKGGGAYEARRGAES*RNPELLAPRNRLYA
Trigger: CGCGTACAGACGGTTGCGAGGAGCGAGGAGCTCCGGGTTTCTGCAACTCTCGGCTCCTCGGCGCGCTTCGTAGGCCCCACCGCCCTTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS CCA 90 bp GCCTTGGTGAACGGGGTTTCTCTGATGAGACTTGTGCTGACTCCGTaGCGTCGGCGTCGGCTCCTCGCACCGACGGAGCCCGGACCCTGC +
Preference number: 5 (lower is better)
Translates to: ALVNGVSLMRLVLTP*RRRRLLAPTEPGPC
Trigger: GCAGGGTCCGGGCTCCGTCGGTGCGAGGAGCCGACGCCGACGCCACGGAGTCAGCACAAGTCTCATCAGAGAAACCCCGTTCACCAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS CCA 90 bp TGCCGGCCCATGTGTGGCAGCGTGGCGCGCTGCCCTGGGCGCGTTTaGAAATGTCTTGGTACAGGACAGGCACTTGTAGCGGCGGCCCGA +
Preference number: 5 (lower is better)
Translates to: CRPMCGSVARCPGRV*KCLGTGQALVAAAR
Trigger: TCGGGCCGCCGCTACAAGTGCCTGTCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000414399.1
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 90 bp CACTTCTCGCAGTGGTATGGCTTCACCCCTTCATGGGCGCGCTGGTaGCGACGGAAGCTCGAGGGGTCGGAGAACATGCGGCCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: HFSQWYGFTPSWARW*RRKLEGSENMRPQR
Trigger: GCGCTGCGGCCGCATGTTCTCCGACCCCTCGAGCTTCCGTCGCCACCAGCGCGCCCATGAAGGGGTGAAGCCATACCACTGCGAGAAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 90 bp CCGCACTTCTCGCAGTGGTATGGCTTCACCCCTTCATGGGCGCGCTaGTGGCGACGGAAGCTCGAGGGGTCGGAGAACATGCGGCCGCAG +
Preference number: 5 (lower is better)
Translates to: PHFSQWYGFTPSWAR*WRRKLEGSENMRPQ
Trigger: CTGCGGCCGCATGTTCTCCGACCCCTCGAGCTTCCGTCGCCACCAGCGCGCCCATGAAGGGGTGAAGCCATACCACTGCGAGAAGTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 90 bp GTGGGACCTCGGCCACCTCTTCAGAGCAGTCTGCCGGCCCATGTGTaGCAGCGTGGCGCGCTGCCCTGGGCGCGTTTGGAAATGTCTTGG +
Preference number: 5 (lower is better)
Translates to: VGPRPPLQSSLPAHV*QRGALPWARLEMSW
Trigger: CCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAGACTGCTCTGAAGAGGTGGCCGAGGTCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414399.1
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGACCAGCGCGTGCCGCTaGAGGTCCCAGGACGCCACG +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGTSACR*RSQDAT
Trigger: CGTGGCGTCCTGGGACCTCAAGCGGCACGCGCTGGT...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 90 bp GTGTGGCAGCGTGGCGCGCTGCCCTGGGCGCGTTTGGAAATGTCTTaGTACAGGACAGGCACTTGTAGCGGCGGCCCGAGCGCTTGTAGC +
Preference number: 5 (lower is better)
Translates to: VWQRGALPWARLEMS*YRTGTCSGGPSACS
Trigger: GCTACAAGCGCTCGGGCCGCCGCTACAAGTGCCTGTCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000414399.1
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 90 bp GCTTCACCTCGGCCACCTCTTCAGAGCAGTCTGCCGGCCCATGTGTaGCAGCGTGGCGCGCTGCCCTGGGCGCGTTTGGAAATGTCTTGG +
Preference number: 5 (lower is better)
Translates to: ASPRPPLQSSLPAHV*QRGALPWARLEMSW
Trigger: CCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAGACTGCTCTGAAGAGGTGGCCGAGGTGAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 90 bp GGCATTCCACATGCTCCACCGTCATGCCCACCACCTGCCACTGTGTaGCCATCACACCACCTGACTCCGGGGGCAGCCCTAGCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: GIPHAPPSCPPPATV*PSHHLTPGAALAAL
Trigger: CAGGGCTGCTAGGGCTGCCCCCGGAGTCAGGTGGTGTGATGGCCACACAGTGGCAGGTGGTGGGCATGACGGTGGAGCATGTGGAATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 90 bp GCAGGGGGCACACCCGCGGCCTCACTGCTTCGATGGGTCCGCTCGTaGTTCCTCAGGCTCGACGACACCACAAAGGATTTCCCACATGCG +
Preference number: 5 (lower is better)
Translates to: AGGTPAASLLRWVRS*FLRLDDTTKDFPHA
Trigger: CGCATGTGGGAAATCCTTTGTGGTGTCGTCGAGCCTGAGGAAGCACGAGCGGACCCATCGAAGCAGTGAGGCCGCGGGTGTGCCCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 90 bp CCTTGGGACAATGGGGGCAGGTGTAGGGGCGCACTGAGCTGTGAGTaGGGCTGTGTTTGCGCAGCCCAGCCCGGTCAGAGAAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: PWDNGGRCRGALSCE*GCVCAAQPGQRSSC
Trigger: GCAAGAGCTTCTCTGACCGGGCTGGGCTGCGCAAACACAGCCGCACTCACAGCTCAGTGCGCCCCTACACCTGCCCCCATTGTCCCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 90 bp TCGGCCACCTCTTCAGAGCAGTCTGCCGGCCCATGTGTGGCAGCGTaGCGCGCTGCCCTGGGCGCGTTTGGAAATGTCTTGGTACAGGAC +
Preference number: 5 (lower is better)
Translates to: SATSSEQSAGPCVAA*RAALGAFGNVLVQD
Trigger: GTCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAGACTGCTCTGAAGAGGTGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000414399.1
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 90 bp ACCAGCTCCTGTGCAGGGGGCACACCCGCGGCCTCACTGCTTCGATaGGTCCGCTCGTGCTTCCTCAGGCTCGACGACACCACAAAGGAT +
Preference number: 5 (lower is better)
Translates to: TSSCAGGTPAASLLR*VRSCFLRLDDTTKD
Trigger: ATCCTTTGTGGTGTCGTCGAGCCTGAGGAAGCACGAGCGGACCCATCGAAGCAGTGAGGCCGCGGGTGTGCCCCCTGCACAGGAGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGGCTGCCGGAAGTCCTaGCCGCACTTCTCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGGCRKS*PHFSQW
Trigger: CCACTGCGAGAAGTGCGGCAAGGACTTCCGGCAGCC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 90 bp CCAGCATCTTGGCATTCCACATGCTCCACCGTCATGCCCACCACCTaGCACTGTGTGGCCATCACACCACCTGACTCCGGGGGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: PASWHSTCSTVMPTT*HCVAITPPDSGGSP
Trigger: AGGGCTGCCCCCGGAGTCAGGTGGTGTGATGGCCACACAGTGGCAGGTGGTGGGCATGACGGTGGAGCATGTGGAATGCCAAGATGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 90 bp CAGAGCAGTCTGCCGGCCCATGTGTGGCAGCGTGGCGCGCTGCCCTaGGCGCGTTTGGAAATGTCTTGGTACAGGACAGGCACTTGTAGC +
Preference number: 5 (lower is better)
Translates to: QSSLPAHVWQRGALP*ARLEMSWYRTGTCS
Trigger: GCTACAAGTGCCTGTCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAGACTGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000414399.1
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 90 bp CTCTTCAGAGCAGTCTGCCGGCCCATGTGTGGCAGCGTGGCGCGCTaGCCTGGGCGCGTTTGGAAATGTCTTGGTACAGGACAGGCACTT +
Preference number: 5 (lower is better)
Translates to: LFRAVCRPMCGSVAR*PGRVWKCLGTGQAL
Trigger: AAGTGCCTGTCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAGACTGCTCTGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000414399.1
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGTCACATTGCAGGCACTaGAACGGCCGGTCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGSHCRH*NGRSPV
Trigger: CACAGGCGACCGGCCGTTCAAGTGCCTGCAATGTGA...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGCACTCAAGAAGGCCTaGGGACAATGGGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGALKKA*GQWGQV
Trigger: CACCTGCCCCCATTGTCCCAAGGCCTTCTTGAGTGC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGTGGGTGCGTTCATGCTaGCGCAAGTCGCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGWVRSC*RKSLAL
Trigger: GAGTGCCAGCGACTTGCGCAAGCATGAACGCACCCA...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS TCA 90 bp CCTATGGCGGCAGAGAAGCATCTTGCAAGAGGTCTCTGTGTGTGCTaGGGCAAGGGGACGCCAGGCAGGCTGACGGTATACGCCCGCCTT +
Preference number: 5 (lower is better)
Translates to: PMAAEKHLARGLCVC*GKGTPGRLTVYARL
Trigger: AAGGCGGGCGTATACCGTCAGCCTGCCTGGCGTCCCCTTGCCTCAGCACACACAGAGACCTCTTGCAAGATGCTTCTCTGCCGCCATAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300849.5
ENST00000564456.1
CDS GCA 90 bp AAGGGACCAGGAGCCTCCCGGACACCAGCATCTTGGCATTCCACATaGTCCACCGTCATGCCCACCACCTGCCACTGTGTGGCCATCACA +
Preference number: 5 (lower is better)
Translates to: KGPGASRTPASWHST*STVMPTTCHCVAIT
Trigger: TGTGATGGCCACACAGTGGCAGGTGGTGGGCATGACGGTGGAGCATGTGGAATGCCAAGATGCTGGTGTCCGGGAGGCTCCTGGTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 90 bp GGGACGCCAGGCAGGCTGACGGTATACGCCCGCCTTGTGTTAGTCTaGGGCCAGGTCACCGGCAATGTCTTCAAGAACCAGAAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: GTPGRLTVYARLVLV*GQVTGNVFKNQKVG
Trigger: TCCCACCTTCTGGTTCTTGAAGACATTGCCGGTGACCTGGCCCCAGACTAACACAAGGCGGGCGTATACCGTCAGCCTGCCTGGCGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300849.5
ENST00000564456.1
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCTGCCCTGGGCGCGTTaGGAAATGTCTTGGTACAGG +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGLPWAR*EMSWYR
Trigger: CCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCTTCTGTCTCTGGCTTaGGCTTCACCTCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGLLSLA*ASPRPP
Trigger: AGGTGGCCGAGGTGAAGCCAAAGCCAGAGACAGAAG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCCGGACACCAGCATCTaGGCATTCCACATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGPDTSI*AFHMLH
Trigger: GTGGAGCATGTGGAATGCCAAGATGCTGGTGTCCGG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 90 bp AAAGTTCCCGGGGAACCTCCAGCCTATGGCGGCAGAGAAGCATCTTaGAAGAGGTCTCTGTGTGTGCTGAGGCAAGGGGACGCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: KVPGEPPAYGGREAS*KRSLCVLRQGDARQ
Trigger: CTGCCTGGCGTCCCCTTGCCTCAGCACACACAGAGACCTCTTGCAAGATGCTTCTCTGCCGCCATAGGCTGGAGGTTCCCCGGGAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300849.5
ENST00000564456.1
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGAACGTCTTGTCACATaGCAGGCACTTGAACGGCCG +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGERLVT*QALERP
Trigger: CGGCCGTTCAAGTGCCTGCAATGTGACAAGACGTTC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGACGCCACGAACGTCTaGTCACATTGCAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGDATNV*SHCRHL
Trigger: CAAGTGCCTGCAATGTGACAAGACGTTCGTGGCGTC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGGTGGAGAAGGTCTCCTaGCACTCTCGGCACACAAAC +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGVEKVS*HSRHTN
Trigger: GTTTGTGTGCCGAGAGTGCAAGGAGACCTTCTCCAC...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGTCCACTTCCATGGCCTaGGTGAACGGGGTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGSTSMA*VNGVSL
Trigger: GAGAGAAACCCCGTTCACCAAGGCCATGGAAGTGGA...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426488.6
ENST00000539836.3
CDS GCA 90 bp CCTCCACCTCTAGATGCAGTTTCCTGGGCTCGGGGAGCCCTTGCCTaGCTTCTCCAACGGGAAAGCCCCTTTACATCCTTCAAGAACCCC +
Preference number: 5 (lower is better)
Translates to: PPPLDAVSWARGALA*LLQRESPFTSFKNP
Trigger: GGGGTTCTTGAAGGATGTAAAGGGGCTTTCCCGTTGGAGAAGGCAGGCAAGGGCTCCCCGAGCCCAGGAAACTGCATCTAGAGGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGCGGCAGAGAAGCATCTaGCAAGAGGTCTCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGRQRSI*QEVSVC
Trigger: ACACACAGAGACCTCTTGCAAGATGCTTCTCTGCCG...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGTCCACTTCCATGGCCTaGGTGAACGGGGTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGSTSMA*VNGVSH
Trigger: ATGAGAAACCCCGTTCACCAAGGCCATGGAAGTGGA...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCCGGCGCCTGGGATCTaGCAGCGCGGGCCACGCGAC +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQPAPGI*QRGPRD
Trigger: GTCGCGTGGCCCGCGCTGCAAGATCCCAGGCGCCGG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS CCA 90 bp GCGCCCAGAAAAGACAGACCTGGGACCAGAAAAGGGCTGAGCCAATaGGCTAAATCTGGTAGCTGGCACTGTCTGGAAGTGACAGGTCCC +
Preference number: 5 (lower is better)
Translates to: APRKDRPGTRKGLSQ*AKSGSWHCLEVTGP
Trigger: GGGACCTGTCACTTCCAGACAGTGCCAGCTACCAGATTTAGCCCATTGGCTCAGCCCTTTTCTGGTCCCAGGTCTGTCTTTTCTGGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442862.2
ENST00000535577.5
ENST00000539836.3
CDS-3UTR CAA 90 bp CTCCACTGTCCCAGCTCTCTTAGCTGGCCGACAGGGGAGCTAGTTGCTGAGGGGACAGGTCCCCAGCATTaGTGTTTTCTTTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LHCPSSLSWPTGELVAEGTGPQH*CFLSSS
Trigger: AGAGGAGGAAAGAAAACACAAATGCTGGGGACCTGT...CCCCTCAGCAACTAGCTCCCCTGTCGGCCAGCTAAGAGAGCTGGGACAGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000535577.5
ENST00000539836.3
CDS GCA 90 bp CAATCCTCCACCTCTAGATGCAGTTTCCTGGGCTCGGGGAGCCCTTaGCTGCCTTCTCCAACGGGAAAGCCCCTTTACATCCTTCAAGAA +
Preference number: 5 (lower is better)
Translates to: QSSTSRCSFLGSGSP*LPSPTGKPLYILQE
Trigger: TTCTTGAAGGATGTAAAGGGGCTTTCCCGTTGGAGAAGGCAGGCAAGGGCTCCCCGAGCCCAGGAAACTGCATCTAGAGGTGGAGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS-3UTR CAA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCACCAGCGCGTGCCGCTaGAGGTCCCAGGACGCCACG +
Preference number: 5 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLTSACR*RSQDAT
Trigger: CGTGGCGTCCTGGGACCTCAAGCGGCACGCGCTGGT...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR CAA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCACCAGCGCGTGCCGCTaGAGGTCCCAGGACGCCACG +
Preference number: 5 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSTSACR*RSQDAT
Trigger: CGTGGCGTCCTGGGACCTCAAGCGGCACGCGCTGGT...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGGCTCGGGGAGCCCTaGCCTGCCTTCTCCAACGGG +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGLGEP*PAFSNG
Trigger: CCCGTTGGAGAAGGCAGGCAAGGGCTCCCCGAGCCC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS GCA 90 bp CCGCAGAGCCACATCTTCCTTCTTCAGCTCAGTGTCCAAGAACTATaGCAGGATAAAGAGTGTACCCAGACGTGGGCCTGGCCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: PQSHIFLLQLSVQEL*QDKECTQTWAWPEG
Trigger: ACCTTCAGGCCAGGCCCACGTCTGGGTACACTCTTTATCCTGGCATAGTTCTTGGACACTGAGCTGAAGAAGGAAGATGTGGCTCTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539836.3
CDS CCA 90 bp CTCAGTGTCCAAGAACTATGCCAGGATAAAGAGTGTACCCAGACGTaGGCCTGGCCTGAAGGTCTCCAAGCGCCCAGAAAAGACAGACCT +
Preference number: 5 (lower is better)
Translates to: LSVQELCQDKECTQT*AWPEGLQAPRKDRP
Trigger: AGGTCTGTCTTTTCTGGGCGCTTGGAGACCTTCAGGCCAGGCCCACGTCTGGGTACACTCTTTATCCTGGCATAGTTCTTGGACACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442862.2
ENST00000535577.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCACCAGCGCGTGCCGCTaGAGGTCCCAGGACGCCACG +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFTSACR*RSQDAT
Trigger: CGTGGCGTCCTGGGACCTCAAGCGGCACGCGCTGGT...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGGCTGCCGGAAGTCCTaGCCGCACTTCTCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQGCRKS*PHFSQW
Trigger: CCACTGCGAGAAGTGCGGCAAGGACTTCCGGCAGCC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGGCTGCCGGAAGTCCTaGCCGCACTTCTCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSGCRKS*PHFSQW
Trigger: CCACTGCGAGAAGTGCGGCAAGGACTTCCGGCAGCC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS GCA 90 bp ACGGGGTTTCTCATCTTCCTTCTTCAGCTCAGTGTCCAAGAACTATaGCAGGATAAAGAGTGTACCCAGACGTGGGCCTGGCCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: TGFLIFLLQLSVQEL*QDKECTQTWAWPEG
Trigger: ACCTTCAGGCCAGGCCCACGTCTGGGTACACTCTTTATCCTGGCATAGTTCTTGGACACTGAGCTGAAGAAGGAAGATGAGAAACCCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442862.2
ENST00000535577.5
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCCACGCTGGTGGATCTaGAGCTTGGAGAGCGCGCCA +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQPRWWI*SLESAP
Trigger: TGGCGCGCTCTCCAAGCTCAAGATCCACCAGCGTGG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTGGGACCGCTCATGGTaGCGGAGGTCCTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSWDRSW*RRSLSS
Trigger: GGAGCTCAAGGACCTCCGCAACCATGAGCGGTCCCA...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTGGGACCGCTCATGGTaGCGGAGGTCCTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQWDRSW*RRSLSS
Trigger: GGAGCTCAAGGACCTCCGCAACCATGAGCGGTCCCA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 90 bp TCCTGCGTTCGTTTCCTCCCTGATCTGCTCATTGAAGAAAGGAGTTaGACCAAGTGTCCGCAGAGCCACATCTTCCTTCTTCAGCTCAGT +
Preference number: 5 (lower is better)
Translates to: SCVRFLPDLLIEERS*TKCPQSHIFLLQLS
Trigger: ACTGAGCTGAAGAAGGAAGATGTGGCTCTGCGGACACTTGGTCCAACTCCTTTCTTCAATGAGCAGATCAGGGAGGAAACGAACGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539836.3
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCCACGCTGGTGGATCTaGAGCTTGGAGAGCGCGCCA +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFPRWWI*SLESAP
Trigger: TGGCGCGCTCTCCAAGCTCAAGATCCACCAGCGTGG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGGGACCGCTCATGGTaGCGGAGGTCCTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFWDRSW*RRSLSS
Trigger: GGAGCTCAAGGACCTCCGCAACCATGAGCGGTCCCA...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGGCTGCCGGAAGTCCTaGCCGCACTTCTCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCGCRKS*PHFSQW
Trigger: CCACTGCGAGAAGTGCGGCAAGGACTTCCGGCAGCC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTCACATTGCAGGCACTaGAACGGCCGGTCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQSHCRH*NGRSPV
Trigger: CACAGGCGACCGGCCGTTCAAGTGCCTGCAATGTGA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGCACTCAAGAAGGCCTaGGGACAATGGGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSALKKA*GQWGQV
Trigger: CACCTGCCCCCATTGTCCCAAGGCCTTCTTGAGTGC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTGGGTGCGTTCATGCTaGCGCAAGTCGCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQWVRSC*RKSLAL
Trigger: GAGTGCCAGCGACTTGCGCAAGCATGAACGCACCCA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCTGCCCTGGGCGCGTTaGGAAATGTCTTGGTACAGG +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQLPWAR*EMSWYR
Trigger: CCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCTGCCCTGGGCGCGTTaGGAAATGTCTTGGTACAGG +
Preference number: 5 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSLPWAR*EMSWYR
Trigger: CCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCTTCTGTCTCTGGCTTaGGCTTCACCTCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQLLSLA*ASPRPP
Trigger: AGGTGGCCGAGGTGAAGCCAAAGCCAGAGACAGAAG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCTTCTGTCTCTGGCTTaGGCTTCACCTCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSLLSLA*ASPRPP
Trigger: AGGTGGCCGAGGTGAAGCCAAAGCCAGAGACAGAAG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCCACGCTGGTGGATCTaGAGCTTGGAGAGCGCGCCA +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCPRWWI*SLESAP
Trigger: TGGCGCGCTCTCCAAGCTCAAGATCCACCAGCGTGG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTGGGACCGCTCATGGTaGCGGAGGTCCTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCWDRSW*RRSLSS
Trigger: GGAGCTCAAGGACCTCCGCAACCATGAGCGGTCCCA...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTCACATTGCAGGCACTaGAACGGCCGGTCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFSHCRH*NGRSPV
Trigger: CACAGGCGACCGGCCGTTCAAGTGCCTGCAATGTGA...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCCCGGACACCAGCATCTaGGCATTCCACATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSPDTSI*AFHMLH
Trigger: GTGGAGCATGTGGAATGCCAAGATGCTGGTGTCCGG...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGCCGGACACCAGCATCTaGGCATTCCACATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQPDTSI*AFHMLH
Trigger: GTGGAGCATGTGGAATGCCAAGATGCTGGTGTCCGG...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGACGCAGCAGCGTCATaGTGGAGAAGGTCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQDAAAS*WRRSPC
Trigger: GCAAGGAGACCTTCTCCACAATGACGCTGCTGCGTC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGCACTCAAGAAGGCCTaGGGACAATGGGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFALKKA*GQWGQV
Trigger: CACCTGCCCCCATTGTCCCAAGGCCTTCTTGAGTGC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTCCACTTCCATGGCCTaGGTGAACGGGGTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSSTSMA*VNGVSL
Trigger: CAGAGAAACCCCGTTCACCAAGGCCATGGAAGTGGA...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCTGCCCTGGGCGCGTTaGGAAATGTCTTGGTACAGG +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFLPWAR*EMSWYR
Trigger: CCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCTTCTGTCTCTGGCTTaGGCTTCACCTCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFLLSLA*ASPRPP
Trigger: AGGTGGCCGAGGTGAAGCCAAAGCCAGAGACAGAAG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCGAACGTCTTGTCACATaGCAGGCACTTGAACGGCCG +
Preference number: 5 (lower is better)
Translates to: GAKMKALMSVTPRQSRLSERLVT*QALERP
Trigger: CGGCCGTTCAAGTGCCTGCAATGTGACAAGACGTTC...GCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300849.5
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGAACGTCTTGTCACATaGCAGGCACTTGAACGGCCG +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQERLVT*QALERP
Trigger: CGGCCGTTCAAGTGCCTGCAATGTGACAAGACGTTC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCCCGGACACCAGCATCTaGGCATTCCACATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFPDTSI*AFHMLH
Trigger: GTGGAGCATGTGGAATGCCAAGATGCTGGTGTCCGG...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGTGGAGAAGGTCTCCTaGCACTCTCGGCACACAAAC +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQVEKVS*HSRHTN
Trigger: GTTTGTGTGCCGAGAGTGCAAGGAGACCTTCTCCAC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp CCTGGTGCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCGTGGAGAAGGTCTCCTaGCACTCTCGGCACACAAAC +
Preference number: 5 (lower is better)
Translates to: PGAKMKALMSVTPRQSRLVEKVS*HSRHTN
Trigger: GTTTGTGTGCCGAGAGTGCAAGGAGACCTTCTCCAC...GAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGCACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGACGCAGCAGCGTCATaGTGGAGAAGGTCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFDAAAS*WRRSPC
Trigger: GCAAGGAGACCTTCTCCACAATGACGCTGCTGCGTC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGCACTCAAGAAGGCCTaGGGACAATGGGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCALKKA*GQWGQV
Trigger: CACCTGCCCCCATTGTCCCAAGGCCTTCTTGAGTGC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTGGGTGCGTTCATGCTaGCGCAAGTCGCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCWVRSC*RKSLAL
Trigger: GAGTGCCAGCGACTTGCGCAAGCATGAACGCACCCA...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTCCACTTCCATGGCCTaGGTGAACGGGGTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQSTSMA*VNGVSL
Trigger: GAGAGAAACCCCGTTCACCAAGGCCATGGAAGTGGA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426488.6
ENST00000539836.3
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCTGCCCTGGGCGCGTTaGGAAATGTCTTGGTACAGG +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCLPWAR*EMSWYR
Trigger: CCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCTTCTGTCTCTGGCTTaGGCTTCACCTCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCLLSLA*ASPRPP
Trigger: AGGTGGCCGAGGTGAAGCCAAAGCCAGAGACAGAAG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGACGCCACGAACGTCTaGTCACATTGCAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFDATNV*SHCRHL
Trigger: CAAGTGCCTGCAATGTGACAAGACGTTCGTGGCGTC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCCGGACACCAGCATCTaGGCATTCCACATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCPDTSI*AFHMLH
Trigger: GTGGAGCATGTGGAATGCCAAGATGCTGGTGTCCGG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGACGCAGCAGCGTCATaGTGGAGAAGGTCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCDAAAS*WRRSPC
Trigger: GCAAGGAGACCTTCTCCACAATGACGCTGCTGCGTC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCACAGAATTCTGGCCTaGCACAGCTGTACGGGCCTC +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCHRILA*HSCTGL
Trigger: GAGGCCCGTACAGCTGTGCAAGGCCAGAATTCTGTG...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535577.5
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGGCGTTTGGAAATGTCTaGGTACAGGACAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQAFGNV*VQDRHL
Trigger: CAAGTGCCTGTCCTGTACCAAGACATTTCCAAACGC...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGAACGTCTTGTCACATaGCAGGCACTTGAACGGCCG +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCERLVT*QALERP
Trigger: CGGCCGTTCAAGTGCCTGCAATGTGACAAGACGTTC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGACGCCACGAACGTCTaGTCACATTGCAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCDATNV*SHCRHL
Trigger: CAAGTGCCTGCAATGTGACAAGACGTTCGTGGCGTC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTCCACTTCCATGGCCTaGGTGAACGGGGTTTCTATC +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFSTSMA*VNGVSI
Trigger: GATAGAAACCCCGTTCACCAAGGCCATGGAAGTGGA...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394983.6
CDS-3UTR CAA 90 bp ATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCCAGTCCACTTCCATGGCCTaGGTGAACGGGGTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: MKALMSVTPRQSRLSFCQSTSMA*VNGVSF
Trigger: AAAAGAAACCCCGTTCACCAAGGCCATGGAAGTGGA...CTGGCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCGCGTTTGGAAATGTCTaGGTACAGGACAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFAFGNV*VQDRHL
Trigger: CAAGTGCCTGTCCTGTACCAAGACATTTCCAAACGC...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 90 bp CGGCAATGTCTTCAAGAACCAGAAGGTGGGAGGACAAAAAGGCCATaGTCAAGCTCTGCAAAACCTAAGTCCAATTATATTCCACAACAT +
Preference number: 5 (lower is better)
Translates to: RQCLQEPEGGRTKRP*SSSAKPKSNYIPQH
Trigger: ATGTTGTGGAATATAATTGGACTTAGGTTTTGCAGAGCTTGAGCATGGCCTTTTTGTCCTCCCACCTTCTGGTTCTTGAAGACATTGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300849.5
ENST00000564456.1
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCGCGTTTGGAAATGTCTaGGTACAGGACAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCAFGNV*VQDRHL
Trigger: CAAGTGCCTGTCCTGTACCAAGACATTTCCAAACGC...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTCCCTGATCTGCTCATaGAAGAAAGGAGTTGGACCA +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFSLICS*KKGVGP
Trigger: TGGTCCAACTCCTTTCTTCAATGAGCAGATCAGGGA...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426488.6
ENST00000539836.3
CDS-3UTR CAA 90 bp GCCAAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCACAGGTCCCCAGCATTaGTGTTTTCTTTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: AKMKALMSVTPRQSRLSFTGPQH*CFLSSS
Trigger: AGAGGAGGAAAGAAAACACAAATGCTGGGGACCTGT...GAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535577.5
ENST00000539836.3
CDS-3UTR CAA 90 bp AAAATGAAAGCTTTAATGAGTGTTACTCCTAGACAGTCACGTCTCAGCTTCTGCTCCCTGATCTGCTCATaGAAGAAAGGAGTTGGACCA +
Preference number: 5 (lower is better)
Translates to: KMKALMSVTPRQSRLSFCSLICS*KKGVGP
Trigger: TGGTCCAACTCCTTTCTTCAATGAGCAGATCAGGGA...GCAGAAGCTGAGACGTGACTGTCTAGGAGTAACACTCATTAAAGCTTTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426488.6
ENST00000539836.3
CDS CCA 90 bp CTAAGTCCAATTATATTCCACAACATTTCCTTTAATAGCAAGGAGTaGGTTTCACGAAGTTTTCTCCATCTGCCTTGGGAAAAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSPIIFHNISFNSKE*VSRSFLHLPWEKSS
Trigger: GGAGGACTTTTCCCAAGGCAGATGGAGAAAACTTCGTGAAACCCACTCCTTGCTATTAAAGGAAATGTTGTGGAATATAATTGGACTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300849.5
ENST00000564456.1
CDS CCA 72 bp ACACCGCGCCGGGCCAGCAGCCGCGCGGGCCGAGCCTaGGTGTCCGCAGCCCAGAACCGCGGAGACAGCCGG +
Preference number: 6 (lower is better)
Translates to: TPRRASSRAGRA*VSAAQNRGDSR
Trigger: CCGGCTGTCTCCGCGGTTCTGGGCTGCGGACACCCAGGCTCGGCCCGCGCGGCTGCTGGCCCGGCGCGGTGT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS CCA 72 bp GGCCGGGCCTCAGCAGGGGAGGGGGCCGCCGGCGCCTaGGATCTTGCAGCGCGGGCCACGCGACCGGGACAA +
Preference number: 6 (lower is better)
Translates to: GRASAGEGAAGA*DLAARATRPGQ
Trigger: TTGTCCCGGTCGCGTGGCCCGCGCTGCAAGATCCCAGGCGCCGGCGGCCCCCTCCCCTGCTGAGGCCCGGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS GCA 72 bp CGGCGTCGGCTCCTCGCACCGACGGAGCCCGGACCCTaGCAAACAGGGGCCGGCGCTAGGACCCAGCGGGGG +
Preference number: 6 (lower is better)
Translates to: RRRLLAPTEPGP*QTGAGARTQRG
Trigger: CCCCCGCTGGGTCCTAGCGCCGGCCCCTGTTTGGCAGGGTCCGGGCTCCGTCGGTGCGAGGAGCCGACGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300849.5
ENST00000564456.1
CDS GCA 72 bp GGGCAGTGCGCACAGCGGAAGGGCAGTTCGCCAGCGTaGGAGGCCAGGTGCACGCGCAGGCACACGGGCTGC +
Preference number: 6 (lower is better)
Translates to: GQCAQRKGSSPA*EARCTRRHTGC
Trigger: GCAGCCCGTGTGCCTGCGCGTGCACCTGGCCTCGCACGCTGGCGAACTGCCCTTCCGCTGTGCGCACTGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 72 bp CTTGCAAGATGGCGTTCTCTAGGACCGCGGGAGTGGTaGCCGGGCCTCAGCAGGGGAGGGGGCCGCCGGCGC +
Preference number: 6 (lower is better)
Translates to: LARWRSLGPREW*PGLSRGGGRRR
Trigger: GCGCCGGCGGCCCCCTCCCCTGCTGAGGCCCGGCCACCACTCCCGCGGTCCTAGAGAACGCCATCTTGCAAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS CCA 72 bp AGGCTTGCAAGATGGCGTTCTCTAGGACCGCGGGAGTaGTGGCCGGGCCTCAGCAGGGGAGGGGGCCGCCGG +
Preference number: 6 (lower is better)
Translates to: RLARWRSLGPRE*WPGLSRGGGRR
Trigger: CCGGCGGCCCCCTCCCCTGCTGAGGCCCGGCCACCACTCCCGCGGTCCTAGAGAACGCCATCTTGCAAGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS GCA 72 bp CCGGTGTGGGACCTCGGCCACCTCTTCAGAGCAGTCTaGCGGCCCATGTGTGGCAGCGTGGCGCGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: PVWDLGHLFRAV*RPMCGSVARCP
Trigger: AGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAGACTGCTCTGAAGAGGTGGCCGAGGTCCCACACCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414399.1
CDS GCA 72 bp CCAGCTCCTGTGCAGGGGGCACACCCGCGGCCTCACTaGTTCGATGGGTCCGCTCGTGCTTCCTCAGGCTCG +
Preference number: 6 (lower is better)
Translates to: PAPVQGAHPRPH*FDGSARASSGS
Trigger: CGAGCCTGAGGAAGCACGAGCGGACCCATCGAAGCAGTGAGGCCGCGGGTGTGCCCCCTGCACAGGAGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 72 bp CGGCCACCTCTTCAGAGCAGTCTGCCGGCCCATGTGTaGCAGCGTGGCGCGCTGCCCTGGGCGCGTTTGGAA +
Preference number: 6 (lower is better)
Translates to: RPPLQSSLPAHV*QRGALPWARLE
Trigger: TTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAGACTGCTCTGAAGAGGTGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000414399.1
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CAA 90 bp CTGCCGGCCCATGTGTGGCAGCGTGGCGCGCTGCCCTGGGCGCGTTaGGAAATGTCTTGGTACAGGACAGGCACTTGTAGCGGCGGCCCG +
Preference number: 6 (lower is better)
Translates to: LPAHVWQRGALPWAR*EMSWYRTGTCSGGP
Trigger: CGGGCCGCCGCTACAAGTGCCTGTCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000414399.1
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 72 bp GGTGGGGCCTACGAAGCGCGCCGAGGAGCCGAGAGTTaGAGAAACCCGGAGCTCCTCGCTCCTCGCAACCGT +
Preference number: 6 (lower is better)
Translates to: GGAYEARRGAES*RNPELLAPRNR
Trigger: ACGGTTGCGAGGAGCGAGGAGCTCCGGGTTTCTGCAACTCTCGGCTCCTCGGCGCGCTTCGTAGGCCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS CCA 72 bp TGTGCAGGGGGCACACCCGCGGCCTCACTGCTTCGATaGGTCCGCTCGTGCTTCCTCAGGCTCGACGACACC +
Preference number: 6 (lower is better)
Translates to: CAGGTPAASLLR*VRSCFLRLDDT
Trigger: GGTGTCGTCGAGCCTGAGGAAGCACGAGCGGACCCATCGAAGCAGTGAGGCCGCGGGTGTGCCCCCTGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 72 bp TCCGCAGAGCCACTGATGAGACTTGTGCTGACTCCGTaGCGTCGGCGTCGGCTCCTCGCACCGACGGAGCCC +
Preference number: 6 (lower is better)
Translates to: SAEPLMRLVLTP*RRRRLLAPTEP
Trigger: GGGCTCCGTCGGTGCGAGGAGCCGACGCCGACGCCACGGAGTCAGCACAAGTCTCATCAGTGGCTCTGCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564456.1
CDS CAA 90 bp TGCACACGCCGGTGCATGGCCAGGTCCGCCGGCTGCCGGAAGTCCTaGCCGCACTTCTCGCAGTGGTATGGCTTCACCCCTTCATGGGCG +
Preference number: 6 (lower is better)
Translates to: CTRRCMARSAGCRKS*PHFSQWYGFTPSWA
Trigger: CGCCCATGAAGGGGTGAAGCCATACCACTGCGAGAAGTGCGGCAAGGACTTCCGGCAGCCGGCGGACCTGGCCATGCACCGGCGTGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 72 bp CTTTGGCTTCACCTCGGCCACCTCTTCAGAGCAGTCTaGCGGCCCATGTGTGGCAGCGTGGCGCGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: LWLHLGHLFRAV*RPMCGSVARCP
Trigger: AGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAGACTGCTCTGAAGAGGTGGCCGAGGTGAAGCCAAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 72 bp CGTGGCGCGCTGCCCTGGGCGCGTTTGGAAATGTCTTaGTACAGGACAGGCACTTGTAGCGGCGGCCCGAGC +
Preference number: 6 (lower is better)
Translates to: RGALPWARLEMS*YRTGTCSGGPS
Trigger: GCTCGGGCCGCCGCTACAAGTGCCTGTCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000414399.1
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 72 bp CCGCACTTCTCGCAGTGGTATGGCTTCACCCCTTCATaGGCGCGCTGGTGGCGACGGAAGCTCGAGGGGTCG +
Preference number: 6 (lower is better)
Translates to: PHFSQWYGFTPS*ARWWRRKLEGS
Trigger: CGACCCCTCGAGCTTCCGTCGCCACCAGCGCGCCCATGAAGGGGTGAAGCCATACCACTGCGAGAAGTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CAA 90 bp TTTGAAGGGCGGTGGGGCCTACGAAGCGCGCCGAGGAGCCGAGAGTaGCAGAAACCCGGAGCTCCTCGCTCCTCGCAACCGTCTGTACGC +
Preference number: 6 (lower is better)
Translates to: FEGRWGLRSAPRSRE*QKPGAPRSSQPSVR
Trigger: GCGTACAGACGGTTGCGAGGAGCGAGGAGCTCCGGGTTTCTGCAACTCTCGGCTCCTCGGCGCGCTTCGTAGGCCCCACCGCCCTTCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS TCA 72 bp CGCCGGTGTGGGACCGCTCATGGTTGCGGAGGTCCTTaGGCTCCGCATAGGCTTTGCCGCAACGCTCACAGC +
Preference number: 6 (lower is better)
Translates to: RRCGTAHGCGGP*APHRLCRNAHS
Trigger: GCTGTGAGCGTTGCGGCAAAGCCTATGCGGAGCTCAAGGACCTCCGCAACCATGAGCGGTCCCACACCGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS TCA 72 bp AGGGCCGCTGGCCAGAGTGCACCAGCGCGTGCCGCTTaGGGTCCCAGGACGCCACGAACGTCTTGTCACATT +
Preference number: 6 (lower is better)
Translates to: RAAGQSAPARAA*GPRTPRTSCHI
Trigger: AATGTGACAAGACGTTCGTGGCGTCCTGGGACCTCAAGCGGCACGCGCTGGTGCACTCTGGCCAGCGGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 72 bp GCAGTCTGCCGGCCCATGTGTGGCAGCGTGGCGCGCTaGCCTGGGCGCGTTTGGAAATGTCTTGGTACAGGA +
Preference number: 6 (lower is better)
Translates to: AVCRPMCGSVAR*PGRVWKCLGTG
Trigger: TCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAGACTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000414399.1
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 72 bp TGTAGGGGCGCACTGAGCTGTGAGTGCGGCTGTGTTTaGGCAGCCCAGCCCGGTCAGAGAAGCTCTTGCCGC +
Preference number: 6 (lower is better)
Translates to: CRGALSCECGCV*AAQPGQRSSCR
Trigger: GCGGCAAGAGCTTCTCTGACCGGGCTGGGCTGCGCAAACACAGCCGCACTCACAGCTCAGTGCGCCCCTACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 72 bp AATGGGGGCAGGTGTAGGGGCGCACTGAGCTGTGAGTaGGGCTGTGTTTGCGCAGCCCAGCCCGGTCAGAGA +
Preference number: 6 (lower is better)
Translates to: NGGRCRGALSCE*GCVCAAQPGQR
Trigger: TCTCTGACCGGGCTGGGCTGCGCAAACACAGCCGCACTCACAGCTCAGTGCGCCCCTACACCTGCCCCCATT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 72 bp AACGGGGTTTCTCTGATGAGACTTGTGCTGACTCCGTaGCGTCGGCGTCGGCTCCTCGCACCGACGGAGCCC +
Preference number: 6 (lower is better)
Translates to: NGVSLMRLVLTP*RRRRLLAPTEP
Trigger: GGGCTCCGTCGGTGCGAGGAGCCGACGCCGACGCCACGGAGTCAGCACAAGTCTCATCAGAGAAACCCCGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300849.5
CDS CCA 72 bp CAGTGGTATGGCTTCACCCCTTCATGGGCGCGCTGGTaGCGACGGAAGCTCGAGGGGTCGGAGAACATGCGG +
Preference number: 6 (lower is better)
Translates to: QWYGFTPSWARW*RRKLEGSENMR
Trigger: CCGCATGTTCTCCGACCCCTCGAGCTTCCGTCGCCACCAGCGCGCCCATGAAGGGGTGAAGCCATACCACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 72 bp CATGCTCCACCGTCATGCCCACCACCTGCCACTGTGTaGCCATCACACCACCTGACTCCGGGGGCAGCCCTA +
Preference number: 6 (lower is better)
Translates to: HAPPSCPPPATV*PSHHLTPGAAL
Trigger: TAGGGCTGCCCCCGGAGTCAGGTGGTGTGATGGCCACACAGTGGCAGGTGGTGGGCATGACGGTGGAGCATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 72 bp TGTAGGGCCGCAGGCCAGCGTGAGTACGCCGGTGCTTaGGGAACACTGAAGGGTCAGCAAAGCTCTTGCCGC +
Preference number: 6 (lower is better)
Translates to: CRAAGQREYAGA*GTLKGQQSSCR
Trigger: GCGGCAAGAGCTTTGCTGACCCTTCAGTGTTCCGCAAGCACCGGCGTACTCACGCTGGCCTGCGGCCCTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 72 bp TCTTCAGAGCAGTCTGCCGGCCCATGTGTGGCAGCGTaGCGCGCTGCCCTGGGCGCGTTTGGAAATGTCTTG +
Preference number: 6 (lower is better)
Translates to: SSEQSAGPCVAA*RAALGAFGNVL
Trigger: CAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGCAGACTGCTCTGAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000414399.1
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 72 bp TCGCAGTGGTATGGCTTCACCCCTTCATGGGCGCGCTaGTGGCGACGGAAGCTCGAGGGGTCGGAGAACATG +
Preference number: 6 (lower is better)
Translates to: SQWYGFTPSWAR*WRRKLEGSENM
Trigger: CATGTTCTCCGACCCCTCGAGCTTCCGTCGCCACCAGCGCGCCCATGAAGGGGTGAAGCCATACCACTGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 72 bp GACGGAAGGCCGAATGAGGGACAAAGGCTTGCAAGATaGCGTTCTCTAGGACCGCGGGAGTGGTGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: DGRPNEGQRLAR*RSLGPREWWPG
Trigger: GCCCGGCCACCACTCCCGCGGTCCTAGAGAACGCCATCTTGCAAGCCTTTGTCCCTCATTCGGCCTTCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS CAA 72 bp GCGTGCCGCTTGAGGTCCCAGGACGCCACGAACGTCTaGTCACATTGCAGGCACTTGAACGGCCGGTCGCCT +
Preference number: 6 (lower is better)
Translates to: ACRLRSQDATNV*SHCRHLNGRSP
Trigger: AGGCGACCGGCCGTTCAAGTGCCTGCAATGTGACAAGACGTTCGTGGCGTCCTGGGACCTCAAGCGGCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 72 bp TGGCATTCCACATGCTCCACCGTCATGCCCACCACCTaGCACTGTGTGGCCATCACACCACCTGACTCCGGG +
Preference number: 6 (lower is better)
Translates to: WHSTCSTVMPTT*HCVAITPPDSG
Trigger: CCCGGAGTCAGGTGGTGTGATGGCCACACAGTGGCAGGTGGTGGGCATGACGGTGGAGCATGTGGAATGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 72 bp TCCAAGGGACCAGGAGCCTCCCGGACACCAGCATCTTaGCATTCCACATGCTCCACCGTCATGCCCACCACC +
Preference number: 6 (lower is better)
Translates to: SKGPGASRTPAS*HSTCSTVMPTT
Trigger: GGTGGTGGGCATGACGGTGGAGCATGTGGAATGCCAAGATGCTGGTGTCCGGGAGGCTCCTGGTCCCTTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 72 bp CATGCTTGCGCAAGTCGCTGGCACTCAAGAAGGCCTTaGGACAATGGGGGCAGGTGTAGGGGCGCACTGAGC +
Preference number: 6 (lower is better)
Translates to: HACASRWHSRRP*DNGGRCRGALS
Trigger: GCTCAGTGCGCCCCTACACCTGCCCCCATTGTCCCAAGGCCTTCTTGAGTGCCAGCGACTTGCGCAAGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS GCA 72 bp ACACCCGCGGCCTCACTGCTTCGATGGGTCCGCTCGTaGTTCCTCAGGCTCGACGACACCACAAAGGATTTC +
Preference number: 6 (lower is better)
Translates to: TPAASLLRWVRS*FLRLDDTTKDF
Trigger: GAAATCCTTTGTGGTGTCGTCGAGCCTGAGGAAGCACGAGCGGACCCATCGAAGCAGTGAGGCCGCGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CCA 72 bp ATGTGTGGCAGCGTGGCGCGCTGCCCTGGGCGCGTTTaGAAATGTCTTGGTACAGGACAGGCACTTGTAGCG +
Preference number: 6 (lower is better)
Translates to: MCGSVARCPGRV*KCLGTGQALVA
Trigger: CGCTACAAGTGCCTGTCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000414399.1
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CAA 72 bp CATGTGTGGCAGCGTGGCGCGCTGCCCTGGGCGCGTTaGGAAATGTCTTGGTACAGGACAGGCACTTGTAGC +
Preference number: 6 (lower is better)
Translates to: HVWQRGALPWAR*EMSWYRTGTCS
Trigger: GCTACAAGTGCCTGTCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000414399.1
ENST00000417935.1
ENST00000426488.6
ENST00000442862.2
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CAA 72 bp TTCCAAGGGACCAGGAGCCTCCCGGACACCAGCATCTaGGCATTCCACATGCTCCACCGTCATGCCCACCAC +
Preference number: 6 (lower is better)
Translates to: FQGTRSLPDTSI*AFHMLHRHAHH
Trigger: GTGGTGGGCATGACGGTGGAGCATGTGGAATGCCAAGATGCTGGTGTCCGGGAGGCTCCTGGTCCCTTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300849.5
ENST00000394983.6
ENST00000426488.6
ENST00000535577.5
ENST00000538906.5
ENST00000539836.3
CDS CAA 90 bp GAAAGTTCCCGGGGAACCTCCAGCCTATGGCGGCAGAGAAGCATCTaGCAAGAGGTCTCTGTGTGTGCTGAGGCAAGGGGACGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: ESSRGTSSLWRQRSI*QEVSVCAEARGRQA
Trigger: TGCCTGGCGTCCCCTTGCCTCAGCACACACAGAGACCTCTTGCAAGATGCTTCTCTGCCGCCATAGGCTGGAGGTTCCCCGGGAACTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300849.5
ENST00000564456.1
CDS CCA 72 bp GGCAGGCTGACGGTATACGCCCGCCTTGTGTTAGTCTaGGGCCAGGTCACCGGCAATGTCTTCAAGAACCAG +
Preference number: 6 (lower is better)
Translates to: GRLTVYARLVLV*GQVTGNVFKNQ
Trigger: CTGGTTCTTGAAGACATTGCCGGTGACCTGGCCCCAGACTAACACAAGGCGGGCGTATACCGTCAGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300849.5
ENST00000564456.1
CDS GCA 72 bp CTAGATGCAGTTTCCTGGGCTCGGGGAGCCCTTGCCTaGCTTCTCCAACGGGAAAGCCCCTTTACATCCTTC +
Preference number: 6 (lower is better)
Translates to: LDAVSWARGALA*LLQRESPFTSF
Trigger: GAAGGATGTAAAGGGGCTTTCCCGTTGGAGAAGGCAGGCAAGGGCTCCCCGAGCCCAGGAAACTGCATCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS GCA 72 bp ACCTCTAGATGCAGTTTCCTGGGCTCGGGGAGCCCTTaGCTGCCTTCTCCAACGGGAAAGCCCCTTTACATC +
Preference number: 6 (lower is better)
Translates to: TSRCSFLGSGSP*LPSPTGKPLYI
Trigger: GATGTAAAGGGGCTTTCCCGTTGGAGAAGGCAGGCAAGGGCTCCCCGAGCCCAGGAAACTGCATCTAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS GCA 72 bp ACCTCCAGCCACAATTCTCAATCCTCCACCTCTAGATaGAGTTTCCTGGGCTCGGGGAGCCCTTGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: TSSHNSQSSTSR*SFLGSGSPCLP
Trigger: AGGCAGGCAAGGGCTCCCCGAGCCCAGGAAACTGCATCTAGAGGTGGAGGATTGAGAATTGTGGCTGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS CCA 72 bp GGAGGGCAGGACCCCGGTTATAAGCCTCAGAAAACGTaGCTTCGGAGGACGTGGCAAGGAGGACTGAACGAA +
Preference number: 6 (lower is better)
Translates to: GGQDPGYKPQKT*LRRTWQGGLNE
Trigger: TTCGTTCAGTCCTCCTTGCCACGTCCTCCGAAGCCACGTTTTCTGAGGCTTATAACCGGGGTCCTGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394983.6
ENST00000538906.5
CDS CCA 72 bp CGCAGAGCCACTGGGACCAGAAAAGGGCTGAGCCAATaGGCTAAATCTGGTAGCTGGCACTGTCTGGAAGTG +
Preference number: 6 (lower is better)
Translates to: RRATGTRKGLSQ*AKSGSWHCLEV
Trigger: CACTTCCAGACAGTGCCAGCTACCAGATTTAGCCCATTGGCTCAGCCCTTTTCTGGTCCCAGTGGCTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426488.6
CDS CCA 72 bp ACAATTCTCAATCCTCCACCTCTAGATGCAGTTTCCTaGGCTCGGGGAGCCCTTGCCTGCCTTCTCCAACGG +
Preference number: 6 (lower is better)
Translates to: TILNPPPLDAVS*ARGALACLLQR
Trigger: CCGTTGGAGAAGGCAGGCAAGGGCTCCCCGAGCCCAGGAAACTGCATCTAGAGGTGGAGGATTGAGAATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538906.5
CDS GCA 72 bp TCAGAGACAGCAACTGTTCACACAGAATTCTGGCCTTaGACAGCTGTACGGGCCTCCGCCCCAGACTGGAAT +
Preference number: 6 (lower is better)
Translates to: SETATVHTEFWP*TAVRASAPDWN
Trigger: ATTCCAGTCTGGGGCGGAGGCCCGTACAGCTGTGCAAGGCCAGAATTCTGTGTGAACAGTTGCTGTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442862.2
ENST00000535577.5
CDS CCA 72 bp CAAGAACTATGCCAGGATAAAGAGTGTACCCAGACGTaGGCCTGGCCTGAAGGTCTCCAAGCGCCCAGAAAA +
Preference number: 6 (lower is better)
Translates to: QELCQDKECTQT*AWPEGLQAPRK
Trigger: TTTTCTGGGCGCTTGGAGACCTTCAGGCCAGGCCCACGTCTGGGTACACTCTTTATCCTGGCATAGTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442862.2
ENST00000535577.5
ENST00000539836.3
CDS GCA 72 bp CATCCTTCCTGCCCAGCATTCCTGGCTCTGACATCCTaGGTTCGTTTCCTCCCTGATCTGCTCATTGAAGAA +
Preference number: 6 (lower is better)
Translates to: HPSCPAFLALTS*VRFLPDLLIEE
Trigger: TTCTTCAATGAGCAGATCAGGGAGGAAACGAACGCAGGATGTCAGAGCCAGGAATGCTGGGCAGGAAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426488.6
ENST00000539836.3
CDS CCA 72 bp CGTTTCCTCCCTGATCTGCTCATTGAAGAAAGGAGTTaGACCAAGTGTCCGCAGAGCCACTGGGACCAGAAA +
Preference number: 6 (lower is better)
Translates to: RFLPDLLIEERS*TKCPQSHWDQK
Trigger: TTTCTGGTCCCAGTGGCTCTGCGGACACTTGGTCCAACTCCTTTCTTCAATGAGCAGATCAGGGAGGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426488.6
CDS CCA 72 bp AAAGACAGACCTGGGACCAGAAAAGGGCTGAGCCAATaGGCTAAATCTGGTAGCTGGCACTGTCTGGAAGTG +
Preference number: 6 (lower is better)
Translates to: KDRPGTRKGLSQ*AKSGSWHCLEV
Trigger: CACTTCCAGACAGTGCCAGCTACCAGATTTAGCCCATTGGCTCAGCCCTTTTCTGGTCCCAGGTCTGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442862.2
ENST00000535577.5
ENST00000539836.3
CDS GCA 72 bp CACATCTTCCTTCTTCAGCTCAGTGTCCAAGAACTATaGCAGGATAAAGAGTGTACCCAGACGTGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: HIFLLQLSVQEL*QDKECTQTWAW
Trigger: CCAGGCCCACGTCTGGGTACACTCTTTATCCTGGCATAGTTCTTGGACACTGAGCTGAAGAAGGAAGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539836.3
CDS CAA 90 bp AAATCTGGTAGCTGGCACTGTCTGGAAGTGACAGGTCCCCAGCATTaGTGTTTTCTTTCCTCCTCTGGATGGTTAGTCCTCAGAGACAGC +
Preference number: 6 (lower is better)
Translates to: KSGSWHCLEVTGPQH*CFLSSSGWLVLRDS
Trigger: GCTGTCTCTGAGGACTAACCATCCAGAGGAGGAAAGAAAACACAAATGCTGGGGACCTGTCACTTCCAGACAGTGCCAGCTACCAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442862.2
ENST00000535577.5
ENST00000539836.3
CDS CCA 72 bp CGTTTCCTCCCTGATCTGCTCATTGAAGAAAGGAGTTaGACCAAGTGTCCGCAGAGCCACATCTTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: RFLPDLLIEERS*TKCPQSHIFLL
Trigger: AAGAAGGAAGATGTGGCTCTGCGGACACTTGGTCCAACTCCTTTCTTCAATGAGCAGATCAGGGAGGAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539836.3
CDS CCA 72 bp GACAGGTCCCCAGCATTTGTGTTTTCTTTCCTCCTCTaGATGGTTAGTCCTCAGAGACAGCAACTGTTCACA +
Preference number: 6 (lower is better)
Translates to: DRSPAFVFSFLL*MVSPQRQQLFT
Trigger: TGTGAACAGTTGCTGTCTCTGAGGACTAACCATCCAGAGGAGGAAAGAAAACACAAATGCTGGGGACCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442862.2
ENST00000535577.5
ENST00000539836.3
CDS GCA 72 bp CTTCAAGAACCAGAAGGTGGGAGGACAAAAAGGCCATaGTCAAGCTCTGCAAAACCTAAGTCCAATTATATT +
Preference number: 6 (lower is better)
Translates to: LQEPEGGRTKRP*SSSAKPKSNYI
Trigger: AATATAATTGGACTTAGGTTTTGCAGAGCTTGAGCATGGCCTTTTTGTCCTCCCACCTTCTGGTTCTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300849.5
ENST00000564456.1