RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF667 (Homo sapiens)

Ensembl gene IDs: ENSG00000198046

Ensembl transcript IDs: ENST00000292069.10, ENST00000504904.8, ENST00000589652.1, ENST00000589946.1, ENST00000591790.5, ENST00000592189.5, ENST00000629654.1

Found 494 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTCGTAGGGTTCTCTTCCTGTTCTGTAGACAGCTGGCTTCTTCCTaGATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCT +
Preference number: 1 (lower is better)
Translates to: SRRVLFLFCRQLASS*ILTWCREQAGFLMS
Trigger: AGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGAAGAGAACCCTACGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR CCA 90 bp TCTCACAGTTCTGAAGTCTGGAAGTCTGAGAACAGGTCGCCAGCATaGTTAGGTTCTCGTAGGGTTCTCTTCCTGTTCTGTAGACAGCTG +
Preference number: 1 (lower is better)
Translates to: SHSSEVWKSENRSPA*LGSRRVLFLFCRQL
Trigger: CAGCTGTCTACAGAACAGGAAGAGAACCCTACGAGAACCTAACCATGCTGGCGACCTGTTCTCAGACTTCCAGACTTCAGAACTGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR GCA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTaGCTCCCAAATGCCTCATTTCCAAGTAACATCACATTGATGGTG +
Preference number: 1 (lower is better)
Translates to: SHHEGSTLMTSSNPN*LPNASFPSNITLMV
Trigger: CACCATCAATGTGATGTTACTTGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR CCA 90 bp ACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTaGAAGTCTGAGAACAGGTCGCCAGCATGGTTAGGTTCTCGTAGG +
Preference number: 1 (lower is better)
Translates to: TGWLKQQFTSHSSEV*KSENRSPAWLGSRR
Trigger: CCTACGAGAACCTAACCATGCTGGCGACCTGTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR TCA 90 bp CCTAAAGACTCACTTTTCTTTATTCTCACCCACAAGTTTGTCAGCTaGAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATA +
Preference number: 1 (lower is better)
Translates to: PKDSLFFILTHKFVS*KWHPVLPRSSLYLI
Trigger: TATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACAAACTTGTGGGTGAGAATAAAGAAAAGTGAGTCTTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCGTGATCCTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVVILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAGGATCAC...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGCAATCTCTGCTCGGTaGAACCCCCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: FCRQLASSCILTWCREQAAISAR*NPHLLG
Trigger: ACCCAGGAGGTGGGGGTTGCACCGAGCAGAGATTGC...TGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAATCTCCTGACCTCATaGTCCACTCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: SCSVDSWLLPASSHGAESNLLTS*STRLGL
Trigger: GAGGCCAAGGCGAGTGGATCATGAGGTCAGGAGATT...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTCTCAGCCTCCCAAAGTaGTGGGGTTACAGGTGTAAG +
Preference number: 2 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSLSLPK*WGYRCK
Trigger: CTTACACCTGTAACCCCAGCACTTTGGGAGGCTGAG...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTATTGTCTCAATCTCCTaGCCTCATGATCCACTCGCC +
Preference number: 2 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSIVSIS*PHDPLA
Trigger: GGCGAGTGGATCATGAGGTCAGGAGATTGAGACAAT...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGAGCAACCCCCACCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRATPTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGGTGGGGGTTGC...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTGCAACCCCCACCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: SSCILTWCREQAGFLMSFATPTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGGTGGGGGTTGC...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTAAACTCTTGACCTCGTaGTCCGCCTGTCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: MVQRASRLSDVFLRRSLAKLLTS*SACLSL
Trigger: GAGGCTGAGACAGGCGGATCACGAGGTCAAGAGTTT...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTAGCCTCTCCAGTAGCTaGGATTACAGGTGCGCACCA +
Preference number: 2 (lower is better)
Translates to: SSCILTWCREQAGFLMSFSLSSS*DYRCAP
Trigger: TGGTGCGCACCTGTAATCTCAGCTACTGGAGAGGCT...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCCACAAGTTTGTCAGCTaGAAGTGGCACCCTGTTTTG +
Preference number: 2 (lower is better)
Translates to: SCSVDSWLLPASSHGAESHKFVS*KWHPVL
Trigger: CAAAACAGGGTGCCACTTTCAGCTGACAAACTTGTG...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTAATCTCCTGACCTCATaGTCCACTCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: SSCILTWCREQAGFLMSFNLLTS*STRLGL
Trigger: GAGGCCAAGGCGAGTGGATCATGAGGTCAGGAGATT...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGAAATCTCCTGACCTCATaGTCCACTCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRNLLTS*STRLGL
Trigger: GAGGCCAAGGCGAGTGGATCATGAGGTCAGGAGATT...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCGGGATGACATCTGATTaGAGGCTTTTCCGCACTTTC +
Preference number: 2 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVGMTSD*RLFRTF
Trigger: GAAAGTGCGGAAAAGCCTTCAATCAGATGTCATCCC...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCCACAGTTCTGAAGTCTaGAAGTCTGAGAACAGGTCG +
Preference number: 2 (lower is better)
Translates to: SCSVDSWLLPASSHGAESHSSEV*KSENRS
Trigger: CGACCTGTTCTCAGACTTCCAGACTTCAGAACTGTG...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAAACTCTTGACCTCGTaGTCCGCCTGTCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: STLMTSSNPNCLPNASFPKLLTS*SACLSL
Trigger: GAGGCTGAGACAGGCGGATCACGAGGTCAAGAGTTT...TGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCACACAAGTTTGTCAGCTaGAAGTGGCACCCTGTTTTG +
Preference number: 2 (lower is better)
Translates to: FCRQLASSCILTWCREQAHKFVS*KWHPVL
Trigger: CAAAACAGGGTGCCACTTTCAGCTGACAAACTTGTG...TGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCCTTTGCTGTAGACTCTaGCTTAAGGCCTTCGCATTT +
Preference number: 2 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVLCCRL*LKAFAF
Trigger: AAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAG...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTATGCAGAATAAGGGTTaGAAGCCGCCTGAAGAACTT +
Preference number: 2 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSMQNKG*KPPEEL
Trigger: AAGTTCTTCAGGCGGCTTTCAACCCTTATTCTGCAT...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTCTCAGCCTCCCAAAGTaGTGGGGTTACAGGTGTAAG +
Preference number: 2 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRLSLPK*WGYRCK
Trigger: CTTACACCTGTAACCCCAGCACTTTGGGAGGCTGAG...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACTCAGCCTCCCAAAGTaGTGGGGTTACAGGTGTAAG +
Preference number: 2 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRLSLPK*WGYRCK
Trigger: CTTACACCTGTAACCCCAGCACTTTGGGAGGCTGAG...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGAGCAATCTCTGCTCGGTaGAACCCCCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: RLKATTHVELLTGKEPSRAISAR*NPHLLG
Trigger: ACCCAGGAGGTGGGGGTTGCACCGAGCAGAGATTGC...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTCAGCTGGCTTCTTCCTaGATCCTCACATGGTGCAGA +
Preference number: 2 (lower is better)
Translates to: MVQRASRLSDVFLRRSLAQLASS*ILTWCR
Trigger: TCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTG...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCACTTTTCCGCACTTTCTaGACTGGCAGACATTCCCAA +
Preference number: 2 (lower is better)
Translates to: FCRQLASSCILTWCREQALFRTF*TGRHSQ
Trigger: TTGGGAATGTCTGCCAGTGCAGAAAGTGCGGAAAAG...TGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGAATTGTCTCAATCTCCTaGCCTCATGATCCACTCGCC +
Preference number: 2 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRIVSIS*PHDPLA
Trigger: GGCGAGTGGATCATGAGGTCAGGAGATTGAGACAAT...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCACAAACAGCAGAGACTaGAAGCTACTACACATGTTG +
Preference number: 2 (lower is better)
Translates to: SCSVDSWLLPASSHGAESTNSRD*KLLHML
Trigger: CAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGT...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCATGTTGAATAAGGGATaGATGCCGATTGCAGACCTT +
Preference number: 2 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVMLNKG*MPIADL
Trigger: AAGGTCTGCAATCGGCATTCATCCCTTATTCAACAT...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGGCAATCTCTGCTCGGTaGAACCCCCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: YIWHKQQRLKATTHVELLAISAR*NPHLLG
Trigger: ACCCAGGAGGTGGGGGTTGCACCGAGCAGAGATTGC...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAACTGGAGTGCAGTGGTaGAATCTCTGCTCGGTGCAA +
Preference number: 2 (lower is better)
Translates to: WHKQQRLKATTHVELLTGTGVQW*NLCSVQ
Trigger: TTGCACCGAGCAGAGATTGCACCACTGCACTCCAGT...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp TCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAACTGGAGTGCAGTGGTaGAATCTCTGCTCGGTGCAA +
Preference number: 2 (lower is better)
Translates to: STLMTSSNPNCLPNASFPTGVQW*NLCSVQ
Trigger: TTGCACCGAGCAGAGATTGCACCACTGCACTCCAGT...TGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCAGTGGCACCCTGTTTTaGCGAGAAGTTCCTTATATT +
Preference number: 2 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVSGTLF*REVPYI
Trigger: AATATAAGGAACTTCTCGGCAAAACAGGGTGCCACT...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATGTGATCCTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHVILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAGGATCAC...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGAGACAGGGTTTCACCGTaGTCTCAAACTCTTGACCTC +
Preference number: 2 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRDRVSP*SQTLDL
Trigger: GAGGTCAAGAGTTTGAGACCACGGTGAAACCCTGTC...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTGACAGGGTTTCACCGTaGTCTCAAACTCTTGACCTC +
Preference number: 2 (lower is better)
Translates to: MVQRASRLSDVFLRRSLADRVSP*SQTLDL
Trigger: GAGGTCAAGAGTTTGAGACCACGGTGAAACCCTGTC...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGAGCAACCCCCACCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: RLKATTHVELLTGKEPSRATPTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGGTGGGGGTTGC...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CCA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTCCGCACTTTCTGCACTaGCAGACATTCCCAACAACA +
Preference number: 2 (lower is better)
Translates to: MVQRASRLSDVFLRRSLAPHFLH*QTFPTT
Trigger: TGTTGTTGGGAATGTCTGCCAGTGCAGAAAGTGCGG...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CCA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTCCGCACTTTCTGCACTaGCAGACATTCCCAACAACA +
Preference number: 2 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRPHFLH*QTFPTT
Trigger: TGTTGTTGGGAATGTCTGCCAGTGCAGAAAGTGCGG...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGGTCAAAATCACCAATaGCTTTTGCTCTTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSGQNHQ*LLLFGF
Trigger: AAAGCCAAAGAGCAAAAGTCATTGGTGATTTTGACC...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCGATCTTCATTCACAATaGCTGACCAAACTTCTGAGT +
Preference number: 2 (lower is better)
Translates to: SCSVDSWLLPASSHGAESDLHSQ*LTKLLS
Trigger: ACTCAGAAGTTTGGTCAGTCATTGTGAATGAAGATC...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGAAAACTCTTGACCTCGTaGTCCGCCTGTCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: RLKATTHVELLTGKEPSRKLLTS*SACLSL
Trigger: GAGGCTGAGACAGGCGGATCACGAGGTCAAGAGTTT...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGGGTTGTTCTTTGATTaGAGCTTTCCCCACATTTAT +
Preference number: 2 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSGLFFD*SFPHIY
Trigger: ATAAATGTGGGGAAAGCTTCAATCAAAGAACAACCC...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAGGTTTCTTCCCTGAATaGCCTTTCTTAGGTTTTACT +
Preference number: 2 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPGFFPE*PFLGFT
Trigger: AGTAAAACCTAAGAAAGGGCATTCAGGGAAGAAACC...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CCA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGGCAACCCCCACCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: YIWHKQQRLKATTHVELLATPTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGGTGGGGGTTGC...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAAACTCTTGACCTCGTaGTCCGCCTGTCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDKLLTS*SACLSL
Trigger: GAGGCTGAGACAGGCGGATCACGAGGTCAAGAGTTT...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAAAACTCTTGACCTCGTaGTCCGCCTGTCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: LVLLLIACLSQVRRSHHEKLLTS*SACLSL
Trigger: GAGGCTGAGACAGGCGGATCACGAGGTCAAGAGTTT...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGACACAAGTTTGTCAGCTaGAAGTGGCACCCTGTTTTG +
Preference number: 2 (lower is better)
Translates to: WHKQQRLKATTHVELLTGHKFVS*KWHPVL
Trigger: CAAAACAGGGTGCCACTTTCAGCTGACAAACTTGTG...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCACCAGATTTGTTGCATTaGTTTGGAGGTAACTTCTTG +
Preference number: 2 (lower is better)
Translates to: FCRQLASSCILTWCREQAPDLLH*FGGNFL
Trigger: CAAGAAGTTACCTCCAAATCAATGCAACAAATCTGG...TGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCATGTTCAATAAGAAATaGTTGGCGGCCGAAAACTTT +
Preference number: 2 (lower is better)
Translates to: SCSVDSWLLPASSHGAESMFNKK*LAAENF
Trigger: AAAGTTTTCGGCCGCCAATCATTTCTTATTGAACAT...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCATGTTCAATAAGAAATaGTTGGCGGCCGAAAACTTT +
Preference number: 2 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVMFNKK*LAAENF
Trigger: AAAGTTTTCGGCCGCCAATCATTTCTTATTGAACAT...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAGAGATATTCGGTGGCTaGAGGCTTTTCCACATTCCT +
Preference number: 2 (lower is better)
Translates to: WHKQQRLKATTHVELLTGEIFGG*RLFHIP
Trigger: AGGAATGTGGAAAAGCCTTCAGCCACCGAATATCTC...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTCATCTAATCCTAATTaGCTCCCAAATGCCTCATTT +
Preference number: 2 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVSSNPN*LPNASF
Trigger: AAATGAGGCATTTGGGAGGCAATTAGGATTAGATGA...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTGTGATCCTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFVILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAGGATCAC...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTGCCCAGATTTGTTaGATTGATTTGGAGGTAACT +
Preference number: 2 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVFAQIC*IDLEVT
Trigger: AGTTACCTCCAAATCAATGCAACAAATCTGGGCAAA...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTCTAGTTTCTGGCAGATaGTTTGCCCAGATTTGTTGC +
Preference number: 2 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRLVSGR*FAQICC
Trigger: GCAACAAATCTGGGCAAAGCATCTGCCAGAAACTAG...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CCA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGCAGACTGGAGTGCAGTaGTGCAATCTCTGCTCGGTG +
Preference number: 2 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMQTGVQ*CNLCSV
Trigger: CACCGAGCAGAGATTGCACCACTGCACTCCAGTCTG...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CCA 90 bp CAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTCAGACTGGAGTGCAGTaGTGCAATCTCTGCTCGGTG +
Preference number: 2 (lower is better)
Translates to: QLKVAPCFAEKFLIFDNSQTGVQ*CNLCSV
Trigger: CACCGAGCAGAGATTGCACCACTGCACTCCAGTCTG...AGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CCA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCAGACTGGAGTGCAGTaGTGCAATCTCTGCTCGGTG +
Preference number: 2 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSQTGVQ*CNLCSV
Trigger: CACCGAGCAGAGATTGCACCACTGCACTCCAGTCTG...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CCA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGTCCTGCATCCTCACATaGTGCAGAGAGCAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: YIWHKQQRLKATTHVELLSCILT*CREQAG
Trigger: GCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGA...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCCTGCATCCTCACATaGTGCAGAGAGCAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNSCILT*CREQAG
Trigger: GCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGA...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTGAGAACAGCCTCTCCAGTAGCTaGGATTACAGGTGCGCACCA +
Preference number: 2 (lower is better)
Translates to: WLKQQFTSHSSEVWKSENSLSSS*DYRCAP
Trigger: TGGTGCGCACCTGTAATCTCAGCTACTGGAGAGGCT...GTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTGATTTCTCCTGGCTCTaGAATCCTCATTCTTCACTA +
Preference number: 2 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRDFSWL*NPHSSL
Trigger: TAGTGAAGAATGAGGATTTCAGAGCCAGGAGAAATC...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTGATTTCTCCTGGCTCTaGAATCCTCATTCTTCACTA +
Preference number: 2 (lower is better)
Translates to: SSCILTWCREQAGFLMSFDFSWL*NPHSSL
Trigger: TAGTGAAGAATGAGGATTTCAGAGCCAGGAGAAATC...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGAATTGTCTCAATCTCCTaGCCTCATGATCCACTCGCC +
Preference number: 2 (lower is better)
Translates to: RLKATTHVELLTGKEPSRIVSIS*PHDPLA
Trigger: GGCGAGTGGATCATGAGGTCAGGAGATTGAGACAAT...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp CCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAGTAACATCACATCTCAGCCTCCCAAAGTaGTGGGGTTACAGGTGTAAG +
Preference number: 2 (lower is better)
Translates to: PHLILIASQMPHFQVTSHLSLPK*WGYRCK
Trigger: CTTACACCTGTAACCCCAGCACTTTGGGAGGCTGAG...ATGTGATGTTACTTGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTACTGGAGTGCAGTGGTaGAATCTCTGCTCGGTGCAA +
Preference number: 2 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSTGVQW*NLCSVQ
Trigger: TTGCACCGAGCAGAGATTGCACCACTGCACTCCAGT...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp GTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGTAAGGACTGGAGTGCAGTGGTaGAATCTCTGCTCGGTGCAA +
Preference number: 2 (lower is better)
Translates to: VHTMKIIYPHIRGDGKVRTGVQW*NLCSVQ
Trigger: TTGCACCGAGCAGAGATTGCACCACTGCACTCCAGT...CCTTACTTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTGGCACCCTGTTTTaGCGAGAAGTTCCTTATATT +
Preference number: 2 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRSGTLF*REVPYI
Trigger: AATATAAGGAACTTCTCGGCAAAACAGGGTGCCACT...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp AATGGTGACTTCTTTGCTGTAGACTCTGACTTAAGGCCTTCGCATTTTCAGGGACTTTTCCGCACTTTCTaGACTGGCAGACATTCCCAA +
Preference number: 2 (lower is better)
Translates to: NGDFFAVDSDLRPSHFQGLFRTF*TGRHSQ
Trigger: TTGGGAATGTCTGCCAGTGCAGAAAGTGCGGAAAAG...TCCCTGAAAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAGAAGTCACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGAGGTCAAAATCACCAATaGCTTTTGCTCTTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRGQNHQ*LLLFGF
Trigger: AAAGCCAAAGAGCAAAAGTCATTGGTGATTTTGACC...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAGATTTCTCCTGGCTCTaGAATCCTCATTCTTCACTA +
Preference number: 2 (lower is better)
Translates to: WHKQQRLKATTHVELLTGDFSWL*NPHSSL
Trigger: TAGTGAAGAATGAGGATTTCAGAGCCAGGAGAAATC...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTAATCTCCTGACCTCATaGTCCACTCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFNLLTS*STRLGL
Trigger: GAGGCCAAGGCGAGTGGATCATGAGGTCAGGAGATT...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGATTGTCTCAATCTCCTaGCCTCATGATCCACTCGCC +
Preference number: 2 (lower is better)
Translates to: YIWHKQQRLKATTHVELLIVSIS*PHDPLA
Trigger: GGCGAGTGGATCATGAGGTCAGGAGATTGAGACAAT...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATATTGTCTCAATCTCCTaGCCTCATGATCCACTCGCC +
Preference number: 2 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHIVSIS*PHDPLA
Trigger: GGCGAGTGGATCATGAGGTCAGGAGATTGAGACAAT...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTCCAGATTTGTTGCATTaGTTTGGAGGTAACTTCTTG +
Preference number: 2 (lower is better)
Translates to: MVQRASRLSDVFLRRSLAPDLLH*FGGNFL
Trigger: CAAGAAGTTACCTCCAAATCAATGCAACAAATCTGG...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGACTCAGCCTCCCAAAGTaGTGGGGTTACAGGTGTAAG +
Preference number: 2 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRLSLPK*WGYRCK
Trigger: CTTACACCTGTAACCCCAGCACTTTGGGAGGCTGAG...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATTGCATCCTCACATGGTaGAGAGAGCAAGCAGGCTTT +
Preference number: 2 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHCILTW*REQAGF
Trigger: AAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCA...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp CAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTGACAGGGTTTCACCGTaGTCTCAAACTCTTGACCTC +
Preference number: 2 (lower is better)
Translates to: QLKVAPCFAEKFLIFDNSDRVSP*SQTLDL
Trigger: GAGGTCAAGAGTTTGAGACCACGGTGAAACCCTGTC...AGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACGACAGGGTTTCACCGTaGTCTCAAACTCTTGACCTC +
Preference number: 2 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDDRVSP*SQTLDL
Trigger: GAGGTCAAGAGTTTGAGACCACGGTGAAACCCTGTC...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATGACAGGGTTTCACCGTaGTCTCAAACTCTTGACCTC +
Preference number: 2 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHDRVSP*SQTLDL
Trigger: GAGGTCAAGAGTTTGAGACCACGGTGAAACCCTGTC...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTCAGACTGGAGTGCAGTaGTGCAATCTCTGCTCGGTG +
Preference number: 2 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFQTGVQ*CNLCSV
Trigger: CACCGAGCAGAGATTGCACCACTGCACTCCAGTCTG...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGACACATGTTGAACTGCTaGCAGGAAAAGAACCCAGTA +
Preference number: 2 (lower is better)
Translates to: RLKATTHVELLTGKEPSRHMLNC*QEKNPV
Trigger: TACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTG...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAATAAGGGTTGTTCTTTaGTTGAAGCTTTCCCCACAT +
Preference number: 2 (lower is better)
Translates to: STLMTSSNPNCLPNASFPIRVVL*LKLSPH
Trigger: ATGTGGGGAAAGCTTCAATCAAAGAACAACCCTTAT...TGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATGGGATGACATCTGATTaGAGGCTTTTCCGCACTTTC +
Preference number: 2 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHGMTSD*RLFRTF
Trigger: GAAAGTGCGGAAAAGCCTTCAATCAGATGTCATCCC...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTATCACCAATGACTTTTaGTCTTTGGCTTTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: MVQRASRLSDVFLRRSLAITNDF*SLAFKV
Trigger: CACTTTGAAAGCCAAAGAGCAAAAGTCATTGGTGAT...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTATCACCAATGACTTTTaGTCTTTGGCTTTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRITNDF*SLAFKV
Trigger: CACTTTGAAAGCCAAAGAGCAAAAGTCATTGGTGAT...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTTCATCTAATCCTAATTaGCTCCCAAATGCCTCATTT +
Preference number: 2 (lower is better)
Translates to: MVQRASRLSDVFLRRSLASSNPN*LPNASF
Trigger: AAATGAGGCATTTGGGAGGCAATTAGGATTAGATGA...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATTGTTCTGTAGACAGCTaGCTTCTTCCTGCATCCTCA +
Preference number: 2 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHCSVDS*LLPASS
Trigger: TGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACA...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATCACATGTTGAACTGCTaGCAGGAAAAGAACCCAGTA +
Preference number: 2 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHHMLNC*QEKNPV
Trigger: TACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTG...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGAAGCTACTACACATGTTaGACTGCTGACAGGAAAAGA +
Preference number: 2 (lower is better)
Translates to: RLKATTHVELLTGKEPSRSYYTC*TADRKR
Trigger: TCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCT...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTGGGTTGAAAGCCGCCTaGAGAACTTGTCACATTTAT +
Preference number: 2 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSGLKAA*RTCHIY
Trigger: ATAAATGTGACAAGTTCTTCAGGCGGCTTTCAACCC...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGGGGTTGAAAGCCGCCTaGAGAACTTGTCACATTTAT +
Preference number: 2 (lower is better)
Translates to: YIWHKQQRLKATTHVELLGLKAA*RTCHIY
Trigger: ATAAATGTGACAAGTTCTTCAGGCGGCTTTCAACCC...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp TCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAATCACCAATGACTTTTaGTCTTTGGCTTTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: STLMTSSNPNCLPNASFPITNDF*SLAFKV
Trigger: CACTTTGAAAGCCAAAGAGCAAAAGTCATTGGTGAT...TGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGCTAGTTTCTGGCAGATaGTTTGCCCAGATTTGTTGC +
Preference number: 2 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMLVSGR*FAQICC
Trigger: GCAACAAATCTGGGCAAAGCATCTGCCAGAAACTAG...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CCA 90 bp TCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCACTTTGGCTTTCAAAGTaGGACATATCATCAAATGGT +
Preference number: 2 (lower is better)
Translates to: STLMTSSNPNCLPNASFPLWLSK*DISSNG
Trigger: ACCATTTGATGATATGTCCCACTTTGAAAGCCAAAG...TGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGACACAGTTCTGAAGTCTaGAAGTCTGAGAACAGGTCG +
Preference number: 2 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRHSSEV*KSENRS
Trigger: CGACCTGTTCTCAGACTTCCAGACTTCAGAACTGTG...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTCACAAGTTTGTCAGCTaGAAGTGGCACCCTGTTTTG +
Preference number: 2 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFHKFVS*KWHPVL
Trigger: CAAAACAGGGTGCCACTTTCAGCTGACAAACTTGTG...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TTAGACGTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAACTTTGCTGTAGACTCTaGCTTAAGGCCTTCGCATTT +
Preference number: 2 (lower is better)
Translates to: LDVHTMKIIYPHIRGDGKLCCRL*LKAFAF
Trigger: AAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAG...TTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAACGTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp CCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAGTAACATCACATGGATTCTCTAAATGGTaGCTTCTTTGCTGTAGACTC +
Preference number: 2 (lower is better)
Translates to: PHLILIASQMPHFQVTSHGFSKW*LLCCRL
Trigger: GAGTCTACAGCAAAGAAGTCACCATTTAGAGAATCC...ATGTGATGTTACTTGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATATGTTGAATAAGGGATaGATGCCGATTGCAGACCTT +
Preference number: 2 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHMLNKG*MPIADL
Trigger: AAGGTCTGCAATCGGCATTCATCCCTTATTCAACAT...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR CAA 90 bp TTTATCTACCTAAAGACTCACTTTTCTTTATTCTCACCCACAAGTTaGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTAT +
Preference number: 2 (lower is better)
Translates to: FIYLKTHFSLFSPTS*SAESGTLFCREVPY
Trigger: ATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACAAACTTGTGGGTGAGAATAAAGAAAAGTGAGTCTTTAGGTAGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGGGTCAAAATCACCAATaGCTTTTGCTCTTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: YIWHKQQRLKATTHVELLGQNHQ*LLLFGF
Trigger: AAAGCCAAAGAGCAAAAGTCATTGGTGATTTTGACC...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTCACATGTTGAACTGCTaGCAGGAAAAGAACCCAGTA +
Preference number: 2 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFHMLNC*QEKNPV
Trigger: TACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTG...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGAACAAACAGCAGAGACTaGAAGCTACTACACATGTTG +
Preference number: 2 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRTNSRD*KLLHML
Trigger: CAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGT...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp GTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGTAAGGGGGTTGTTCTTTGATTaGAGCTTTCCCCACATTTAT +
Preference number: 2 (lower is better)
Translates to: VHTMKIIYPHIRGDGKVRGLFFD*SFPHIY
Trigger: ATAAATGTGGGGAAAGCTTCAATCAAAGAACAACCC...CCTTACTTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp TTAGACGTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAAGTGGCACCCTGTTTTaGCGAGAAGTTCCTTATATT +
Preference number: 2 (lower is better)
Translates to: LDVHTMKIIYPHIRGDGKSGTLF*REVPYI
Trigger: AATATAAGGAACTTCTCGGCAAAACAGGGTGCCACT...TTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAACGTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTGGTTTCTTCCCTGAATaGCCTTTCTTAGGTTTTACT +
Preference number: 2 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSGFFPE*PFLGFT
Trigger: AGTAAAACCTAAGAAAGGGCATTCAGGGAAGAAACC...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGAGGTCAAAATCACCAATaGCTTTTGCTCTTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRGQNHQ*LLLFGF
Trigger: AAAGCCAAAGAGCAAAAGTCATTGGTGATTTTGACC...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR TCA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTTGGATGAGATCTGTCTaGAAGCTTTTCTACAATTAC +
Preference number: 2 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSWMRSV*KLFYNY
Trigger: GTAATTGTAGAAAAGCTTTCAGACAGATCTCATCCA...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR TCA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAATGGATGAGATCTGTCTaGAAGCTTTTCTACAATTAC +
Preference number: 2 (lower is better)
Translates to: LVLLLIACLSQVRRSHHEWMRSV*KLFYNY
Trigger: GTAATTGTAGAAAAGCTTTCAGACAGATCTCATCCA...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR GCA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGATCACCAATGACTTTTaGTCTTTGGCTTTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: YIWHKQQRLKATTHVELLITNDF*SLAFKV
Trigger: CACTTTGAAAGCCAAAGAGCAAAAGTCATTGGTGAT...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp CAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTATCACCAATGACTTTTaGTCTTTGGCTTTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: QLKVAPCFAEKFLIFDNSITNDF*SLAFKV
Trigger: CACTTTGAAAGCCAAAGAGCAAAAGTCATTGGTGAT...AGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTAGTGGCACCCTGTTTTaGCGAGAAGTTCCTTATATT +
Preference number: 2 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFSGTLF*REVPYI
Trigger: AATATAAGGAACTTCTCGGCAAAACAGGGTGCCACT...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGCTTTGGCTTTCAAAGTaGGACATATCATCAAATGGT +
Preference number: 2 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMLWLSK*DISSNG
Trigger: ACCATTTGATGATATGTCCCACTTTGAAAGCCAAAG...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp CAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTCTTTGGCTTTCAAAGTaGGACATATCATCAAATGGT +
Preference number: 2 (lower is better)
Translates to: QLKVAPCFAEKFLIFDNSLWLSK*DISSNG
Trigger: ACCATTTGATGATATGTCCCACTTTGAAAGCCAAAG...AGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATCTTTGGCTTTCAAAGTaGGACATATCATCAAATGGT +
Preference number: 2 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHLWLSK*DISSNG
Trigger: ACCATTTGATGATATGTCCCACTTTGAAAGCCAAAG...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CCA 90 bp GTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGTAAGGCTTTGGCTTTCAAAGTaGGACATATCATCAAATGGT +
Preference number: 2 (lower is better)
Translates to: VHTMKIIYPHIRGDGKVRLWLSK*DISSNG
Trigger: ACCATTTGATGATATGTCCCACTTTGAAAGCCAAAG...CCTTACTTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp TGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTGAGAACTCATCTAATCCTAATTaGCTCCCAAATGCCTCATTT +
Preference number: 2 (lower is better)
Translates to: WLKQQFTSHSSEVWKSENSSNPN*LPNASF
Trigger: AAATGAGGCATTTGGGAGGCAATTAGGATTAGATGA...GTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR GCA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGATTTGCCCAGATTTGTTaGATTGATTTGGAGGTAACT +
Preference number: 2 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRFAQIC*IDLEVT
Trigger: AGTTACCTCCAAATCAATGCAACAAATCTGGGCAAA...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CAA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCATTCTCACCCACAAGTTaGTCAGCTGAAAGTGGCACC +
Preference number: 3 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPFSPTS*SAESGT
Trigger: GGTGCCACTTTCAGCTGACAAACTTGTGGGTGAGAA...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTAAGTGGCACCCTGTTTaGCCGAGAAGTTCCTTATAT +
Preference number: 3 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSKWHPV*PRSSLY
Trigger: ATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTT...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR TCA 72 bp AAAGGCACTAATCCCATCACGAGGGCTCCACCCTCATaGCCTCATCTAATCCTAATTGCCTCCCAAATGCCT +
Preference number: 3 (lower is better)
Translates to: KGTNPITRAPPS*PHLILIASQMP
Trigger: AGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGATTAGTGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR CCA 72 bp TCTGAAGTCTGGAAGTCTGAGAACAGGTCGCCAGCATaGTTAGGTTCTCGTAGGGTTCTCTTCCTGTTCTGT +
Preference number: 3 (lower is better)
Translates to: SEVWKSENRSPA*LGSRRVLFLFC
Trigger: ACAGAACAGGAAGAGAACCCTACGAGAACCTAACCATGCTGGCGACCTGTTCTCAGACTTCCAGACTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTTTCTCACCCACAAGTTaGTCAGCTGAAAGTGGCACC +
Preference number: 3 (lower is better)
Translates to: MVQRASRLSDVFLRRSLAFSPTS*SAESGT
Trigger: GGTGCCACTTTCAGCTGACAAACTTGTGGGTGAGAA...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTTCTCACCCACAAGTTaGTCAGCTGAAAGTGGCACC +
Preference number: 3 (lower is better)
Translates to: SSCILTWCREQAGFLMSFFSPTS*SAESGT
Trigger: GGTGCCACTTTCAGCTGACAAACTTGTGGGTGAGAA...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR CCA 72 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATaGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTT +
Preference number: 3 (lower is better)
Translates to: FCRQLASSCILT*CREQAGFLMSF
Trigger: AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGATTCTCACCCACAAGTTaGTCAGCTGAAAGTGGCACC +
Preference number: 3 (lower is better)
Translates to: WHKQQRLKATTHVELLTGFSPTS*SAESGT
Trigger: GGTGCCACTTTCAGCTGACAAACTTGTGGGTGAGAA...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTAAGTGGCACCCTGTTTaGCCGAGAAGTTCCTTATAT +
Preference number: 3 (lower is better)
Translates to: SSCILTWCREQAGFLMSFKWHPV*PRSSLY
Trigger: ATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTT...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCCCAAGTAACATCACATaGATGGTGAGGATTTTAACA +
Preference number: 3 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVPSNIT*MVRILT
Trigger: TGTTAAAATCCTCACCATCAATGTGATGTTACTTGG...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTATTGAAAGACTGACATaGACTCAAGGCCTTCCCACA +
Preference number: 3 (lower is better)
Translates to: SSCILTWCREQAGFLMSFIERLT*TQGLPT
Trigger: TGTGGGAAGGCCTTGAGTCAATGTCAGTCTTTCAAT...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CAA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTAGGGATGAATGCCGATaGCAGACCTTCTCACATTTA +
Preference number: 3 (lower is better)
Translates to: SSCILTWCREQAGFLMSFRDECR*QTFSHL
Trigger: TAAATGTGAGAAGGTCTGCAATCGGCATTCATCCCT...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CAA 90 bp TCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAAGTGGCACCCTGTTTaGCCGAGAAGTTCCTTATAT +
Preference number: 3 (lower is better)
Translates to: STLMTSSNPNCLPNASFPKWHPV*PRSSLY
Trigger: ATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTT...TGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGGACTGAATTTTTGTaGCAGCCACTCTTTCGTGTA +
Preference number: 3 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRRTEFL*QPLFRV
Trigger: TACACGAAAGAGTGGCTGCAACAAAAATTCAGTCCT...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CAA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTACTAGGACTGAATTTTaGTTGCAGCCACTCTTTCGT +
Preference number: 3 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRTRTEF*LQPLFR
Trigger: ACGAAAGAGTGGCTGCAACAAAAATTCAGTCCTAGT...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CAA 90 bp TTAGACGTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAATTCTCACCCACAAGTTaGTCAGCTGAAAGTGGCACC +
Preference number: 3 (lower is better)
Translates to: LDVHTMKIIYPHIRGDGKFSPTS*SAESGT
Trigger: GGTGCCACTTTCAGCTGACAAACTTGTGGGTGAGAA...TTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAACGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAAGACTGATTTCTTTTaGAAGCCTCTCCCACATTTA +
Preference number: 3 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRKTDFF*KPLPHL
Trigger: TAAATGTGGGAGAGGCTTCAAAAAGAAATCAGTCTT...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR TCA 72 bp TCACTTTTCTTTATTCTCACCCACAAGTTTGTCAGCTaGAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTA +
Preference number: 3 (lower is better)
Translates to: SLFFILTHKFVS*KWHPVLPRSSL
Trigger: TAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACAAACTTGTGGGTGAGAATAAAGAAAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR CCA 72 bp CTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTaGAAGTCTGAGAACAGGTCGCCAGCATGGTTAGGT +
Preference number: 3 (lower is better)
Translates to: LKQQFTSHSSEV*KSENRSPAWLG
Trigger: ACCTAACCATGCTGGCGACCTGTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATAAGTGGCACCCTGTTTaGCCGAGAAGTTCCTTATAT +
Preference number: 3 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNKWHPV*PRSSLY
Trigger: ATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTT...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATAAGTGGCACCCTGTTTaGCCGAGAAGTTCCTTATAT +
Preference number: 3 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHKWHPV*PRSSLY
Trigger: ATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTT...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGACCAAGTAACATCACATaGATGGTGAGGATTTTAACA +
Preference number: 3 (lower is better)
Translates to: WHKQQRLKATTHVELLTGPSNIT*MVRILT
Trigger: TGTTAAAATCCTCACCATCAATGTGATGTTACTTGG...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAAGGACTGAATTTTTGTaGCAGCCACTCTTTCGTGTA +
Preference number: 3 (lower is better)
Translates to: LVLLLIACLSQVRRSHHERTEFL*QPLFRV
Trigger: TACACGAAAGAGTGGCTGCAACAAAAATTCAGTCCT...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CAA 90 bp CCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAGTAACATCACATACTAGGACTGAATTTTaGTTGCAGCCACTCTTTCGT +
Preference number: 3 (lower is better)
Translates to: PHLILIASQMPHFQVTSHTRTEF*LQPLFR
Trigger: ACGAAAGAGTGGCTGCAACAAAAATTCAGTCCTAGT...ATGTGATGTTACTTGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
3UTR-3UTR CAA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCCAAGTAACATCACATaGATGGTGAGGATTTTAACA +
Preference number: 3 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSPSNIT*MVRILT
Trigger: TGTTAAAATCCTCACCATCAATGTGATGTTACTTGG...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR-3UTR CAA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGACCAAGTAACATCACATaGATGGTGAGGATTTTAACA +
Preference number: 3 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRPSNIT*MVRILT
Trigger: TGTTAAAATCCTCACCATCAATGTGATGTTACTTGG...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTCAGGGACTCAGCGCCTaGGCACTCCCCTCCGGGACC +
Preference number: 4 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSQGLSA*ALPSGT
Trigger: GGTCCCGGAGGGGAGTGCGCAGGCGCTGAGTCCCTG...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292069.10
ENST00000592189.5
CDS-3UTR GCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCGCAATCTCTGCTCGGTaGAACCCCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SCSVDSWLLPASSHGAESAISAR*NPHLLG
Trigger: ACCCAGGAGGTGGGGGTTGCACCGAGCAGAGATTGC...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAGTGATCCTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPVILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAGGATCAC...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCCCGGCGTCTTCTTACTaGCTCTACCATCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVPASSY*LYHPGC
Trigger: GCACCCTGGATGGTAGAGCCAGTAAGAAGACGCCGG...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR TCA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAAACTCTTGACCTCGTaGTCCGCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPKLLTS*SACLSL
Trigger: GAGGCTGAGACAGGCGGATCACGAGGTCAAGAGTTT...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCAGCCTCTCCAGTAGCTaGGATTACAGGTGCGCACCA +
Preference number: 4 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVSLSSS*DYRCAP
Trigger: TGGTGCGCACCTGTAATCTCAGCTACTGGAGAGGCT...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCGTTTTCACAGGTGTGTaGACTCAGCCACGCACCCCA +
Preference number: 4 (lower is better)
Translates to: SCSVDSWLLPASSHGAESVFTGV*TQPRTP
Trigger: TGGGGTGCGTGGCTGAGTGCACACACCTGTGAAAAC...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504904.8
ENST00000591790.5
CDS-3UTR CCA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCATCCTGCATCCTCACATaGTGCAGAGAGCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPSCILT*CREQAG
Trigger: GCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGA...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAAGCCTCTCCAGTAGCTaGGATTACAGGTGCGCACCA +
Preference number: 4 (lower is better)
Translates to: FCRQLASSCILTWCREQASLSSS*DYRCAP
Trigger: TGGTGCGCACCTGTAATCTCAGCTACTGGAGAGGCT...TGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR TCA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTTATGTCCTCCTGAGGTaGGGACGGCTGGAACCTCGG +
Preference number: 4 (lower is better)
Translates to: MVQRASRLSDVFLRRSLAYVLLR*GRLEPR
Trigger: CCGAGGTTCCAGCCGTCCTCACCTCAGGAGGACATA...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504904.8
CDS-3UTR GCA 90 bp CAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTCAGGGACTCAGCGCCTaGGCACTCCCCTCCGGGACC +
Preference number: 4 (lower is better)
Translates to: QLKVAPCFAEKFLIFDNSQGLSA*ALPSGT
Trigger: GGTCCCGGAGGGGAGTGCGCAGGCGCTGAGTCCCTG...AGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292069.10
ENST00000592189.5
CDS-3UTR CCA 90 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCACAGACTGGAGTGCAGTaGTGCAATCTCTGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: FCRQLASSCILTWCREQAQTGVQ*CNLCSV
Trigger: CACCGAGCAGAGATTGCACCACTGCACTCCAGTCTG...TGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR TCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCATTGTCTCAATCTCCTaGCCTCATGATCCACTCGCC +
Preference number: 4 (lower is better)
Translates to: SCSVDSWLLPASSHGAESIVSIS*PHDPLA
Trigger: GGCGAGTGGATCATGAGGTCAGGAGATTGAGACAAT...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCACCAGGAGGCGGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: STLMTSSNPNCLPNASFPPGGGG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCCGCCTCCTGG...TGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592189.5
CDS-3UTR CCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACCGGCGTCTTCTTACTaGCTCTACCATCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRPASSY*LYHPGC
Trigger: GCACCCTGGATGGTAGAGCCAGTAAGAAGACGCCGG...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCGACAGGGTTTCACCGTaGTCTCAAACTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: SCSVDSWLLPASSHGAESDRVSP*SQTLDL
Trigger: GAGGTCAAGAGTTTGAGACCACGGTGAAACCCTGTC...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAGGAACTCGGCACTACTaGGGAAGAAAGAACAGCAGT +
Preference number: 4 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPGTRHY*GRKNSS
Trigger: ACTGCTGTTCTTTCTTCCCCAGTAGTGCCGAGTTCC...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS-3UTR TCA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAGGGATGACATCTGATTaGAGGCTTTTCCGCACTTTC +
Preference number: 4 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPGMTSD*RLFRTF
Trigger: GAAAGTGCGGAAAAGCCTTCAATCAGATGTCATCCC...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTAAACTCTTGACCTCGTaGTCCGCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSCILTWCREQAGFLMSFKLLTS*SACLSL
Trigger: GAGGCTGAGACAGGCGGATCACGAGGTCAAGAGTTT...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp AATGGTGACTTCTTTGCTGTAGACTCTGACTTAAGGCCTTCGCATTTTCAGGGAGTGATCCTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NGDFFAVDSDLRPSHFQGVILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAGGATCAC...TCCCTGAAAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAGAAGTCACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCATGCATCCTCACATGGTaGAGAGAGCAAGCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FCRQLASSCILTWCREQACILTW*REQAGF
Trigger: AAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCA...TGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAAGTGAGCCGAGATCATaGCATCATTGTAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: FCRQLASSCILTWCREQASEPRS*HHCSPA
Trigger: GGCTGGACTACAATGATGGCATGATCTCGGCTCACT...TGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592189.5
CDS-3UTR CCA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTCAGACTGGAGTGCAGTaGTGCAATCTCTGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRQTGVQ*CNLCSV
Trigger: CACCGAGCAGAGATTGCACCACTGCACTCCAGTCTG...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CCA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTCACAGTTCTGAAGTCTaGAAGTCTGAGAACAGGTCG +
Preference number: 4 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSHSSEV*KSENRS
Trigger: CGACCTGTTCTCAGACTTCCAGACTTCAGAACTGTG...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCGGGTTGAAAGCCGCCTaGAGAACTTGTCACATTTAT +
Preference number: 4 (lower is better)
Translates to: SCSVDSWLLPASSHGAESGLKAA*RTCHIY
Trigger: ATAAATGTGACAAGTTCTTCAGGCGGCTTTCAACCC...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGAGATATTCGGTGGCTaGAGGCTTTTCCACATTCCT +
Preference number: 4 (lower is better)
Translates to: FCRQLASSCILTWCREQAEIFGG*RLFHIP
Trigger: AGGAATGTGGAAAAGCCTTCAGCCACCGAATATCTC...TGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAATGTCGAATCAGGGATaGACTCCGACTATATGCCTT +
Preference number: 4 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPMSNQG*TPTICL
Trigger: AAGGCATATAGTCGGAGTTCATCCCTGATTCGACAT...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCATGTCGAATCAGGGATaGACTCCGACTATATGCCTT +
Preference number: 4 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVMSNQG*TPTICL
Trigger: AAGGCATATAGTCGGAGTTCATCCCTGATTCGACAT...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCCACATGTTGAACTGCTaGCAGGAAAAGAACCCAGTA +
Preference number: 4 (lower is better)
Translates to: SCSVDSWLLPASSHGAESHMLNC*QEKNPV
Trigger: TACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTG...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCCACATGTTGAACTGCTaGCAGGAAAAGAACCCAGTA +
Preference number: 4 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVHMLNC*QEKNPV
Trigger: TACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTG...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAGATGAGAAAGGGCTTTaGAAGGCACAAAGCTATGTC +
Preference number: 4 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPDEKGL*KAQSYV
Trigger: GACATAGCTTTGTGCCTTTCAAAGCCCTTTCTCATC...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504904.8
CDS-3UTR TCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCCACGCACCCCAAATTTaGGAAGATGATTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVHAPQI*EDDSCL
Trigger: CAGACAAGAATCATCTTCTCAAATTTGGGGTGCGTG...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504904.8
ENST00000591790.5
CDS-3UTR GCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTCTCAGCCTCCCAAAGTaGTGGGGTTACAGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: SSCILTWCREQAGFLMSFLSLPK*WGYRCK
Trigger: CTTACACCTGTAACCCCAGCACTTTGGGAGGCTGAG...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGAACTGGAGTGCAGTGGTaGAATCTCTGCTCGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRTGVQW*NLCSVQ
Trigger: TTGCACCGAGCAGAGATTGCACCACTGCACTCCAGT...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CCA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGATCCTGCATCCTCACATaGTGCAGAGAGCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: WHKQQRLKATTHVELLTGSCILT*CREQAG
Trigger: GCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGA...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCTCGGTAACTGGAACATaGTCATTGCTTGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SCSVDSWLLPASSHGAESSVTGT*SLLAFL
Trigger: AAGGAAGGCAAGCAATGACCATGTTCCAGTTACCGA...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS-3UTR TCA 90 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGGTTGAAAGCCGCCTaGAGAACTTGTCACATTTAT +
Preference number: 4 (lower is better)
Translates to: FCRQLASSCILTWCREQAGLKAA*RTCHIY
Trigger: ATAAATGTGACAAGTTCTTCAGGCGGCTTTCAACCC...TGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAATGTTGAATAAGGGATaGATGCCGATTGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPMLNKG*MPIADL
Trigger: AAGGTCTGCAATCGGCATTCATCCCTTATTCAACAT...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTATGTTGAATAAGGGATaGATGCCGATTGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSMLNKG*MPIADL
Trigger: AAGGTCTGCAATCGGCATTCATCCCTTATTCAACAT...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp AATGGTGACTTCTTTGCTGTAGACTCTGACTTAAGGCCTTCGCATTTTCAGGGAAAACTCTTGACCTCGTaGTCCGCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NGDFFAVDSDLRPSHFQGKLLTS*SACLSL
Trigger: GAGGCTGAGACAGGCGGATCACGAGGTCAAGAGTTT...TCCCTGAAAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAGAAGTCACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
CDS-3UTR TCA 90 bp GTAGGAGCTTTTTGTTGTGCAGAAACTAGTTTCTGGCAGATGCTTTGCCCAGATAGCCTCTCCAGTAGCTaGGATTACAGGTGCGCACCA +
Preference number: 4 (lower is better)
Translates to: VGAFCCAETSFWQMLCPDSLSSS*DYRCAP
Trigger: TGGTGCGCACCTGTAATCTCAGCTACTGGAGAGGCT...ATCTGGGCAAAGCATCTGCCAGAAACTAGTTTCTGCACAACAAAAAGCTCCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
CDS-3UTR TCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCGATTTCTCCTGGCTCTaGAATCCTCATTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVDFSWL*NPHSSL
Trigger: TAGTGAAGAATGAGGATTTCAGAGCCAGGAGAAATC...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTATTGTCTCAATCTCCTaGCCTCATGATCCACTCGCC +
Preference number: 4 (lower is better)
Translates to: SSCILTWCREQAGFLMSFIVSIS*PHDPLA
Trigger: GGCGAGTGGATCATGAGGTCAGGAGATTGAGACAAT...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTATTGTCTCAATCTCCTaGCCTCATGATCCACTCGCC +
Preference number: 4 (lower is better)
Translates to: MVQRASRLSDVFLRRSLAIVSIS*PHDPLA
Trigger: GGCGAGTGGATCATGAGGTCAGGAGATTGAGACAAT...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCACACATGTTGAACTGCTaGCAGGAAAAGAACCCAGTA +
Preference number: 4 (lower is better)
Translates to: FCRQLASSCILTWCREQAHMLNC*QEKNPV
Trigger: TACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTG...TGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCAGCTACTACACATGTTaGACTGCTGACAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVSYYTC*TADRKR
Trigger: TCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCT...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCACAAACAGCAGAGACTaGAAGCTACTACACATGTTG +
Preference number: 4 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVTNSRD*KLLHML
Trigger: CAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGT...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTTTGGATTTCCCCCGTaGAGAAGGCATCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SSCILTWCREQAGFLMSFFGFPP*RRHPFL
Trigger: GAGGAAAGGATGCCTTCTGCACGGGGGAAATCCAAA...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCCCCAAATGTTATAGGTaGCTTGGATTTGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: SCSVDSWLLPASSHGAESPKCYR*LGFGFP
Trigger: GGGAAATCCAAATCCAAGGCACCTATAACATTTGGG...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGGCAATCTCTGCTCGGTaGAACCCCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMAISAR*NPHLLG
Trigger: ACCCAGGAGGTGGGGGTTGCACCGAGCAGAGATTGC...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGTGATCCTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LVLLLIACLSQVRRSHHEVILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAGGATCAC...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp GTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGTAAGGGTGATCCTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VHTMKIIYPHIRGDGKVRVILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAGGATCAC...CCTTACTTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGGTGATCCTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMVILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAGGATCAC...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGCATCCTCACATGGTaGAGAGAGCAAGCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SSCILTWCREQAGFLMSFCILTW*REQAGF
Trigger: AAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCA...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGACAGCTGGCTTCTTCCTaGATCCTCACATGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: WHKQQRLKATTHVELLTGQLASS*ILTWCR
Trigger: TCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTG...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGACCGGCGTCTTCTTACTaGCTCTACCATCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: RLKATTHVELLTGKEPSRPASSY*LYHPGC
Trigger: GCACCCTGGATGGTAGAGCCAGTAAGAAGACGCCGG...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACCGCACTTTCTGCACTaGCAGACATTCCCAACAACA +
Preference number: 4 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRPHFLH*QTFPTT
Trigger: TGTTGTTGGGAATGTCTGCCAGTGCAGAAAGTGCGG...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTGACAGGGTTTCACCGTaGTCTCAAACTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: SSCILTWCREQAGFLMSFDRVSP*SQTLDL
Trigger: GAGGTCAAGAGTTTGAGACCACGGTGAAACCCTGTC...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTGACAGGGTTTCACCGTaGTCTCAAACTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRDRVSP*SQTLDL
Trigger: GAGGTCAAGAGTTTGAGACCACGGTGAAACCCTGTC...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATAAGCAGATCAGTTaGCTTTCCCCTTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSDKQIS*LSPSNY
Trigger: GTAATTGGAAGGGGAAAGCCAACTGATCTGCTTATC...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504904.8
ENST00000591790.5
CDS-3UTR CCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATCACCTCCTTGGCTTCTaGGGAGGCCTCAGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNHLLGF*GGLSEL
Trigger: GAGCTCACTGAGGCCTCCCCAGAAGCCAAGGAGGTG...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS-3UTR TCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTCATACAAATCCTTCTaGATGGGGCTCAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: SSCILTWCREQAGFLMSFSYKSF*MGLSHS
Trigger: GGAATGGCTGAGCCCCATTCAGAAGGATTTGTATGA...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR TCA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAGGGTTGTTCTTTGATTaGAGCTTTCCCCACATTTAT +
Preference number: 4 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPGLFFD*SFPHIY
Trigger: ATAAATGTGGGGAAAGCTTCAATCAAAGAACAACCC...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCGGGTTGTTCTTTGATTaGAGCTTTCCCCACATTTAT +
Preference number: 4 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVGLFFD*SFPHIY
Trigger: ATAAATGTGGGGAAAGCTTCAATCAAAGAACAACCC...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCATAAGGGTTGTTCTTTaGTTGAAGCTTTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: SCSVDSWLLPASSHGAESIRVVL*LKLSPH
Trigger: ATGTGGGGAAAGCTTCAATCAAAGAACAACCCTTAT...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTATAAGGGTTGTTCTTTaGTTGAAGCTTTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSIRVVL*LKLSPH
Trigger: ATGTGGGGAAAGCTTCAATCAAAGAACAACCCTTAT...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTGGGATGACATCTGATTaGAGGCTTTTCCGCACTTTC +
Preference number: 4 (lower is better)
Translates to: SSCILTWCREQAGFLMSFGMTSD*RLFRTF
Trigger: GAAAGTGCGGAAAAGCCTTCAATCAGATGTCATCCC...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGAGGGATGACATCTGATTaGAGGCTTTTCCGCACTTTC +
Preference number: 4 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRGMTSD*RLFRTF
Trigger: GAAAGTGCGGAAAAGCCTTCAATCAGATGTCATCCC...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAGTAACATCACATCTTCCATCACGATTGTaGGGCCTCCCCAGCCACGTA +
Preference number: 4 (lower is better)
Translates to: PHLILIASQMPHFQVTSHLPSRL*GLPSHV
Trigger: TACGTGGCTGGGGAGGCCTCACAATCGTGATGGAAG...ATGTGATGTTACTTGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504904.8
ENST00000591790.5
CDS-3UTR TCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATCTTCCATCACGATTGTaGGGCCTCCCCAGCCACGTA +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNLPSRL*GLPSHV
Trigger: TACGTGGCTGGGGAGGCCTCACAATCGTGATGGAAG...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504904.8
ENST00000591790.5
CDS-3UTR GCA 90 bp AATGGTGACTTCTTTGCTGTAGACTCTGACTTAAGGCCTTCGCATTTTCAGGGAACTGGAGTGCAGTGGTaGAATCTCTGCTCGGTGCAA +
Preference number: 4 (lower is better)
Translates to: NGDFFAVDSDLRPSHFQGTGVQW*NLCSVQ
Trigger: TTGCACCGAGCAGAGATTGCACCACTGCACTCCAGT...TCCCTGAAAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAGAAGTCACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp GTAGGAGCTTTTTGTTGTGCAGAAACTAGTTTCTGGCAGATGCTTTGCCCAGATCAGCTGGCTTCTTCCTaGATCCTCACATGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VGAFCCAETSFWQMLCPDQLASS*ILTWCR
Trigger: TCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTG...ATCTGGGCAAAGCATCTGCCAGAAACTAGTTTCTGCACAACAAAAAGCTCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CCA 90 bp CAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTCCGGCGTCTTCTTACTaGCTCTACCATCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: QLKVAPCFAEKFLIFDNSPASSY*LYHPGC
Trigger: GCACCCTGGATGGTAGAGCCAGTAAGAAGACGCCGG...AGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACGCAACCCCCACCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDATPTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGGTGGGGGTTGC...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CCA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGCAACCCCCACCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LVLLLIACLSQVRRSHHEATPTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGGTGGGGGTTGC...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGATCCTGCATCCTCACATaGTGCAGAGAGCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RLKATTHVELLTGKEPSRSCILT*CREQAG
Trigger: GCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGA...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTCACAGTTCTGAAGTCTaGAAGTCTGAGAACAGGTCG +
Preference number: 4 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRHSSEV*KSENRS
Trigger: CGACCTGTTCTCAGACTTCCAGACTTCAGAACTGTG...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTACTCCATATATTAGCTaGGGCTGCCATAACAAAACA +
Preference number: 4 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSTPYIS*GCHNKT
Trigger: TGTTTTGTTATGGCAGCCCCAGCTAATATATGGAGT...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTGGATGAGATCTGTCTaGAAGCTTTTCTACAATTAC +
Preference number: 4 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVWMRSV*KLFYNY
Trigger: GTAATTGTAGAAAAGCTTTCAGACAGATCTCATCCA...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTTGGATGAGATCTGTCTaGAAGCTTTTCTACAATTAC +
Preference number: 4 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSWMRSV*KLFYNY
Trigger: GTAATTGTAGAAAAGCTTTCAGACAGATCTCATCCA...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTGGGTTGAAAGCCGCCTaGAGAACTTGTCACATTTAT +
Preference number: 4 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRGLKAA*RTCHIY
Trigger: ATAAATGTGACAAGTTCTTCAGGCGGCTTTCAACCC...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTGGGTTGAAAGCCGCCTaGAGAACTTGTCACATTTAT +
Preference number: 4 (lower is better)
Translates to: SSCILTWCREQAGFLMSFGLKAA*RTCHIY
Trigger: ATAAATGTGACAAGTTCTTCAGGCGGCTTTCAACCC...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTATGCAGAATAAGGGTTaGAAGCCGCCTGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: SSCILTWCREQAGFLMSFMQNKG*KPPEEL
Trigger: AAGTTCTTCAGGCGGCTTTCAACCCTTATTCTGCAT...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGAATGTCGAATCAGGGATaGACTCCGACTATATGCCTT +
Preference number: 4 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRMSNQG*TPTICL
Trigger: AAGGCATATAGTCGGAGTTCATCCCTGATTCGACAT...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGAATCTCCTGACCTCATaGTCCACTCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: YIWHKQQRLKATTHVELLNLLTS*STRLGL
Trigger: GAGGCCAAGGCGAGTGGATCATGAGGTCAGGAGATT...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGTAAGGAATCTCCTGACCTCATaGTCCACTCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VHTMKIIYPHIRGDGKVRNLLTS*STRLGL
Trigger: GAGGCCAAGGCGAGTGGATCATGAGGTCAGGAGATT...CCTTACTTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAAAGCTATGTCCTCCTaGGGTGAGGACGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDKAMSS*GEDGWN
Trigger: GTTCCAGCCGTCCTCACCTCAGGAGGACATAGCTTT...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504904.8
CDS-3UTR TCA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGCCACGTAGAACTGTaGGTCTGGGTATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRSHVEL*VWVCLY
Trigger: ATAAAGACATACCCAGACTCACAGTTCTACGTGGCT...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504904.8
ENST00000591790.5
CDS-3UTR GCA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGACTTTTCCGCACTTTCTaGACTGGCAGACATTCCCAA +
Preference number: 4 (lower is better)
Translates to: WHKQQRLKATTHVELLTGLFRTF*TGRHSQ
Trigger: TTGGGAATGTCTGCCAGTGCAGAAAGTGCGGAAAAG...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAATCACCAATGACTTTTaGTCTTTGGCTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPITNDF*SLAFKV
Trigger: CACTTTGAAAGCCAAAGAGCAAAAGTCATTGGTGAT...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTTCATCTAATCCTAATTaGCTCCCAAATGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSSSNPN*LPNASF
Trigger: AAATGAGGCATTTGGGAGGCAATTAGGATTAGATGA...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGACAGCTGGCTTCTTCCTaGATCCTCACATGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RLKATTHVELLTGKEPSRQLASS*ILTWCR
Trigger: TCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTG...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp CAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTGTTTTCACAGGTGTGTaGACTCAGCCACGCACCCCA +
Preference number: 4 (lower is better)
Translates to: QLKVAPCFAEKFLIFDNSVFTGV*TQPRTP
Trigger: TGGGGTGCGTGGCTGAGTGCACACACCTGTGAAAAC...AGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504904.8
ENST00000591790.5
CDS-3UTR CCA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGCAGACTGGAGTGCAGTaGTGCAATCTCTGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: YIWHKQQRLKATTHVELLQTGVQ*CNLCSV
Trigger: CACCGAGCAGAGATTGCACCACTGCACTCCAGTCTG...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATCAGACTGGAGTGCAGTaGTGCAATCTCTGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHQTGVQ*CNLCSV
Trigger: CACCGAGCAGAGATTGCACCACTGCACTCCAGTCTG...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACTCCTGCATCCTCACATaGTGCAGAGAGCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDSCILT*CREQAG
Trigger: GCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGA...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp GTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGTAAGGTCCTGCATCCTCACATaGTGCAGAGAGCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VHTMKIIYPHIRGDGKVRSCILT*CREQAG
Trigger: GCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGA...CCTTACTTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTGTACAAGCATGGTGCTaGCACCTCCTTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSVQAWC*HLLGFW
Trigger: CCAGAAGCCAAGGAGGTGCCAGCACCATGCTTGTAC...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS-3UTR TCA 90 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCATGGATGAGATCTGTCTaGAAGCTTTTCTACAATTAC +
Preference number: 4 (lower is better)
Translates to: FCRQLASSCILTWCREQAWMRSV*KLFYNY
Trigger: GTAATTGTAGAAAAGCTTTCAGACAGATCTCATCCA...TGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTGGATTCTCTAAATGGTaGCTTCTTTGCTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: MVQRASRLSDVFLRRSLAGFSKW*LLCCRL
Trigger: GAGTCTACAGCAAAGAAGTCACCATTTAGAGAATCC...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGAGGATTCTCTAAATGGTaGCTTCTTTGCTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRGFSKW*LLCCRL
Trigger: GAGTCTACAGCAAAGAAGTCACCATTTAGAGAATCC...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAGGGTTGAAAGCCGCCTaGAGAACTTGTCACATTTAT +
Preference number: 4 (lower is better)
Translates to: WHKQQRLKATTHVELLTGGLKAA*RTCHIY
Trigger: ATAAATGTGACAAGTTCTTCAGGCGGCTTTCAACCC...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTGAGAACAATCTCCTGACCTCATaGTCCACTCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: WLKQQFTSHSSEVWKSENNLLTS*STRLGL
Trigger: GAGGCCAAGGCGAGTGGATCATGAGGTCAGGAGATT...GTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp GTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGTAAGGCTCAGCCTCCCAAAGTaGTGGGGTTACAGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: VHTMKIIYPHIRGDGKVRLSLPK*WGYRCK
Trigger: CTTACACCTGTAACCCCAGCACTTTGGGAGGCTGAG...CCTTACTTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATCTCAGCCTCCCAAAGTaGTGGGGTTACAGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNLSLPK*WGYRCK
Trigger: CTTACACCTGTAACCCCAGCACTTTGGGAGGCTGAG...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp CCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAGTAACATCACATACTGGAGTGCAGTGGTaGAATCTCTGCTCGGTGCAA +
Preference number: 4 (lower is better)
Translates to: PHLILIASQMPHFQVTSHTGVQW*NLCSVQ
Trigger: TTGCACCGAGCAGAGATTGCACCACTGCACTCCAGT...ATGTGATGTTACTTGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGCAGCTGGCTTCTTCCTaGATCCTCACATGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMQLASS*ILTWCR
Trigger: TCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTG...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTGCAACCCCCACCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFATPTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGGTGGGGGTTGC...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CCA 90 bp GTAGGAGCTTTTTGTTGTGCAGAAACTAGTTTCTGGCAGATGCTTTGCCCAGATCACAGTTCTGAAGTCTaGAAGTCTGAGAACAGGTCG +
Preference number: 4 (lower is better)
Translates to: VGAFCCAETSFWQMLCPDHSSEV*KSENRS
Trigger: CGACCTGTTCTCAGACTTCCAGACTTCAGAACTGTG...ATCTGGGCAAAGCATCTGCCAGAAACTAGTTTCTGCACAACAAAAAGCTCCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
CDS-3UTR TCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGATCATACAAATCCTTCTaGATGGGGCTCAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: RLKATTHVELLTGKEPSRSYKSF*MGLSHS
Trigger: GGAATGGCTGAGCCCCATTCAGAAGGATTTGTATGA...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR TCA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAGGATTCTCTAAATGGTaGCTTCTTTGCTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: WHKQQRLKATTHVELLTGGFSKW*LLCCRL
Trigger: GAGTCTACAGCAAAGAAGTCACCATTTAGAGAATCC...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp AATGGTGACTTCTTTGCTGTAGACTCTGACTTAAGGCCTTCGCATTTTCAGGGAATGCAGAATAAGGGTTaGAAGCCGCCTGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: NGDFFAVDSDLRPSHFQGMQNKG*KPPEEL
Trigger: AAGTTCTTCAGGCGGCTTTCAACCCTTATTCTGCAT...TCCCTGAAAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAGAAGTCACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
CDS-3UTR TCA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTGGTCAAAATCACCAATaGCTTTTGCTCTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: MVQRASRLSDVFLRRSLAGQNHQ*LLLFGF
Trigger: AAAGCCAAAGAGCAAAAGTCATTGGTGATTTTGACC...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTGGTCAAAATCACCAATaGCTTTTGCTCTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SSCILTWCREQAGFLMSFGQNHQ*LLLFGF
Trigger: AAAGCCAAAGAGCAAAAGTCATTGGTGATTTTGACC...AAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGACACAAGTTTGTCAGCTaGAAGTGGCACCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: RLKATTHVELLTGKEPSRHKFVS*KWHPVL
Trigger: CAAAACAGGGTGCCACTTTCAGCTGACAAACTTGTG...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATATTGTCTCAATCTCCTaGCCTCATGATCCACTCGCC +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNIVSIS*PHDPLA
Trigger: GGCGAGTGGATCATGAGGTCAGGAGATTGAGACAAT...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAGCTACTACACATGTTaGACTGCTGACAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: STLMTSSNPNCLPNASFPSYYTC*TADRKR
Trigger: TCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCT...TGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTGAGACCAACGAAGACTaGGACCCACTAAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSETNED*DPLKRL
Trigger: CAGCCTTTTTAGTGGGTCTCAGTCTTCGTTGGTCTC...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS-3UTR GCA 90 bp CCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAGTAACATCACATTTTGGATTTCCCCCGTaGAGAAGGCATCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PHLILIASQMPHFQVTSHFGFPP*RRHPFL
Trigger: GAGGAAAGGATGCCTTCTGCACGGGGGAAATCCAAA...ATGTGATGTTACTTGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp GTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGTAAGGTTTGGATTTCCCCCGTaGAGAAGGCATCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VHTMKIIYPHIRGDGKVRFGFPP*RRHPFL
Trigger: GAGGAAAGGATGCCTTCTGCACGGGGGAAATCCAAA...CCTTACTTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGACTTTTCCGCACTTTCTaGACTGGCAGACATTCCCAA +
Preference number: 4 (lower is better)
Translates to: RLKATTHVELLTGKEPSRLFRTF*TGRHSQ
Trigger: TTGGGAATGTCTGCCAGTGCAGAAAGTGCGGAAAAG...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTGAGAACCTCAGCCTCCCAAAGTaGTGGGGTTACAGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: WLKQQFTSHSSEVWKSENLSLPK*WGYRCK
Trigger: CTTACACCTGTAACCCCAGCACTTTGGGAGGCTGAG...GTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGAACTGGAGTGCAGTGGTaGAATCTCTGCTCGGTGCAA +
Preference number: 4 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRTGVQW*NLCSVQ
Trigger: TTGCACCGAGCAGAGATTGCACCACTGCACTCCAGT...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp TCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAGTGGCACCCTGTTTTaGCGAGAAGTTCCTTATATT +
Preference number: 4 (lower is better)
Translates to: STLMTSSNPNCLPNASFPSGTLF*REVPYI
Trigger: AATATAAGGAACTTCTCGGCAAAACAGGGTGCCACT...TGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATGACAGGGTTTCACCGTaGTCTCAAACTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNDRVSP*SQTLDL
Trigger: GAGGTCAAGAGTTTGAGACCACGGTGAAACCCTGTC...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGAACTCCATATATTAGCTaGGGCTGCCATAACAAAACA +
Preference number: 4 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRTPYIS*GCHNKT
Trigger: TGTTTTGTTATGGCAGCCCCAGCTAATATATGGAGT...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCATACAAATCCTTCTaGATGGGGCTCAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNSYKSF*MGLSHS
Trigger: GGAATGGCTGAGCCCCATTCAGAAGGATTTGTATGA...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR TCA 90 bp GTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGTAAGGTCATACAAATCCTTCTaGATGGGGCTCAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: VHTMKIIYPHIRGDGKVRSYKSF*MGLSHS
Trigger: GGAATGGCTGAGCCCCATTCAGAAGGATTTGTATGA...CCTTACTTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR TCA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTTGGATGAGATCTGTCTaGAAGCTTTTCTACAATTAC +
Preference number: 4 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRWMRSV*KLFYNY
Trigger: GTAATTGTAGAAAAGCTTTCAGACAGATCTCATCCA...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTTGGATGAGATCTGTCTaGAAGCTTTTCTACAATTAC +
Preference number: 4 (lower is better)
Translates to: MVQRASRLSDVFLRRSLAWMRSV*KLFYNY
Trigger: GTAATTGTAGAAAAGCTTTCAGACAGATCTCATCCA...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGGGATGACATCTGATTaGAGGCTTTTCCGCACTTTC +
Preference number: 4 (lower is better)
Translates to: LVLLLIACLSQVRRSHHEGMTSD*RLFRTF
Trigger: GAAAGTGCGGAAAAGCCTTCAATCAGATGTCATCCC...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGAATGCAGAATAAGGGTTaGAAGCCGCCTGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: RLKATTHVELLTGKEPSRMQNKG*KPPEEL
Trigger: AAGTTCTTCAGGCGGCTTTCAACCCTTATTCTGCAT...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTATGTTCAATAAGAAATaGTTGGCGGCCGAAAACTTT +
Preference number: 4 (lower is better)
Translates to: MVQRASRLSDVFLRRSLAMFNKK*LAAENF
Trigger: AAAGTTTTCGGCCGCCAATCATTTCTTATTGAACAT...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGAATGTTCAATAAGAAATaGTTGGCGGCCGAAAACTTT +
Preference number: 4 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRMFNKK*LAAENF
Trigger: AAAGTTTTCGGCCGCCAATCATTTCTTATTGAACAT...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACGAGATATTCGGTGGCTaGAGGCTTTTCCACATTCCT +
Preference number: 4 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDEIFGG*RLFHIP
Trigger: AGGAATGTGGAAAAGCCTTCAGCCACCGAATATCTC...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATGAGATATTCGGTGGCTaGAGGCTTTTCCACATTCCT +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNEIFGG*RLFHIP
Trigger: AGGAATGTGGAAAAGCCTTCAGCCACCGAATATCTC...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGGAGATATTCGGTGGCTaGAGGCTTTTCCACATTCCT +
Preference number: 4 (lower is better)
Translates to: YIWHKQQRLKATTHVELLEIFGG*RLFHIP
Trigger: AGGAATGTGGAAAAGCCTTCAGCCACCGAATATCTC...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAGTAACATCACATGAGATATTCGGTGGCTaGAGGCTTTTCCACATTCCT +
Preference number: 4 (lower is better)
Translates to: PHLILIASQMPHFQVTSHEIFGG*RLFHIP
Trigger: AGGAATGTGGAAAAGCCTTCAGCCACCGAATATCTC...ATGTGATGTTACTTGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAGATCTTCATTCACAATaGCTGACCAAACTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: STLMTSSNPNCLPNASFPDLHSQ*LTKLLS
Trigger: ACTCAGAAGTTTGGTCAGTCATTGTGAATGAAGATC...TGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGTAAGGCACAAGTTTGTCAGCTaGAAGTGGCACCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: VHTMKIIYPHIRGDGKVRHKFVS*KWHPVL
Trigger: CAAAACAGGGTGCCACTTTCAGCTGACAAACTTGTG...CCTTACTTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATCACAAGTTTGTCAGCTaGAAGTGGCACCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNHKFVS*KWHPVL
Trigger: CAAAACAGGGTGCCACTTTCAGCTGACAAACTTGTG...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp AATGGTGACTTCTTTGCTGTAGACTCTGACTTAAGGCCTTCGCATTTTCAGGGAACAAACAGCAGAGACTaGAAGCTACTACACATGTTG +
Preference number: 4 (lower is better)
Translates to: NGDFFAVDSDLRPSHFQGTNSRD*KLLHML
Trigger: CAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGT...TCCCTGAAAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAGAAGTCACCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
CDS-3UTR TCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACCAAATTTGAGAAGATaGTTCTTGTCTGATATGGTC +
Preference number: 4 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRPNLRR*FLSDMV
Trigger: GACCATATCAGACAAGAATCATCTTCTCAAATTTGG...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504904.8
ENST00000591790.5
CDS-3UTR GCA 90 bp GTAGGAGCTTTTTGTTGTGCAGAAACTAGTTTCTGGCAGATGCTTTGCCCAGATCCCAAATGTTATAGGTaGCTTGGATTTGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: VGAFCCAETSFWQMLCPDPKCYR*LGFGFP
Trigger: GGGAAATCCAAATCCAAGGCACCTATAACATTTGGG...ATCTGGGCAAAGCATCTGCCAGAAACTAGTTTCTGCACAACAAAAAGCTCCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGATTTGCCCAGATTTGTTaGATTGATTTGGAGGTAACT +
Preference number: 4 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRFAQIC*IDLEVT
Trigger: AGTTACCTCCAAATCAATGCAACAAATCTGGGCAAA...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAGGTTTCTTCCCTGAATaGCCTTTCTTAGGTTTTACT +
Preference number: 4 (lower is better)
Translates to: WHKQQRLKATTHVELLTGGFFPE*PFLGFT
Trigger: AGTAAAACCTAAGAAAGGGCATTCAGGGAAGAAACC...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGCTTTTCCGCACTTTCTaGACTGGCAGACATTCCCAA +
Preference number: 4 (lower is better)
Translates to: YIWHKQQRLKATTHVELLLFRTF*TGRHSQ
Trigger: TTGGGAATGTCTGCCAGTGCAGAAAGTGCGGAAAAG...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp CATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTTCATCTAATCCTAATTaGCTCCCAAATGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: HPHMVQRASRLSDVFLRRSSNPN*LPNASF
Trigger: AAATGAGGCATTTGGGAGGCAATTAGGATTAGATGA...ACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAATGTTCTGTAGACAGCTaGCTTCTTCCTGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: LVLLLIACLSQVRRSHHECSVDS*LLPASS
Trigger: TGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACA...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGTGTTCTGTAGACAGCTaGCTTCTTCCTGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMCSVDS*LLPASS
Trigger: TGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACA...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp CAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTTGTTCTGTAGACAGCTaGCTTCTTCCTGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: QLKVAPCFAEKFLIFDNSCSVDS*LLPASS
Trigger: TGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACA...AGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACCACAGTTCTGAAGTCTaGAAGTCTGAGAACAGGTCG +
Preference number: 4 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDHSSEV*KSENRS
Trigger: CGACCTGTTCTCAGACTTCCAGACTTCAGAACTGTG...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR CAA 72 bp CTAAAGACTCACTTTTCTTTATTCTCACCCACAAGTTaGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: LKTHFSLFSPTS*SAESGTLFCRE
Trigger: TTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACAAACTTGTGGGTGAGAATAAAGAAAAGTGAGTCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp AATGGTGACTTCTTTGCTGTAGACTCTGACTTAAGGCCTTCGCATTTTCAGGGAATAAGGGTTGTTCTTTaGTTGAAGCTTTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: NGDFFAVDSDLRPSHFQGIRVVL*LKLSPH
Trigger: ATGTGGGGAAAGCTTCAATCAAAGAACAACCCTTAT...TCCCTGAAAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAGAAGTCACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
CDS-3UTR TCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACCTTTGCTGTAGACTCTaGCTTAAGGCCTTCGCATTT +
Preference number: 4 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDLCCRL*LKAFAF
Trigger: AAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAG...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATCTTTGCTGTAGACTCTaGCTTAAGGCCTTCGCATTT +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNLCCRL*LKAFAF
Trigger: AAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAG...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGTAAGGCTTTGCTGTAGACTCTaGCTTAAGGCCTTCGCATTT +
Preference number: 4 (lower is better)
Translates to: VHTMKIIYPHIRGDGKVRLCCRL*LKAFAF
Trigger: AAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAG...CCTTACTTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGCTTTGCTGTAGACTCTaGCTTAAGGCCTTCGCATTT +
Preference number: 4 (lower is better)
Translates to: YIWHKQQRLKATTHVELLLCCRL*LKAFAF
Trigger: AAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAG...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAATGCAGAATAAGGGTTaGAAGCCGCCTGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: LVLLLIACLSQVRRSHHEMQNKG*KPPEEL
Trigger: AAGTTCTTCAGGCGGCTTTCAACCCTTATTCTGCAT...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTATGTCGAATCAGGGATaGACTCCGACTATATGCCTT +
Preference number: 4 (lower is better)
Translates to: QLKVAPCFAEKFLIFDNSMSNQG*TPTICL
Trigger: AAGGCATATAGTCGGAGTTCATCCCTGATTCGACAT...AGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACATGTCGAATCAGGGATaGACTCCGACTATATGCCTT +
Preference number: 4 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDMSNQG*TPTICL
Trigger: AAGGCATATAGTCGGAGTTCATCCCTGATTCGACAT...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGACACAAGTTTGTCAGCTaGAAGTGGCACCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRHKFVS*KWHPVL
Trigger: CAAAACAGGGTGCCACTTTCAGCTGACAAACTTGTG...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGCACATGTTGAACTGCTaGCAGGAAAAGAACCCAGTA +
Preference number: 4 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMHMLNC*QEKNPV
Trigger: TACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTG...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATAGCCACGTAGAACTGTaGGTCTGGGTATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHSHVEL*VWVCLY
Trigger: ATAAAGACATACCCAGACTCACAGTTCTACGTGGCT...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504904.8
ENST00000591790.5
CDS-3UTR GCA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGATTTGCCCAGATTTGTTaGATTGATTTGGAGGTAACT +
Preference number: 4 (lower is better)
Translates to: WHKQQRLKATTHVELLTGFAQIC*IDLEVT
Trigger: AGTTACCTCCAAATCAATGCAACAAATCTGGGCAAA...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGCTAGTTTCTGGCAGATaGTTTGCCCAGATTTGTTGC +
Preference number: 4 (lower is better)
Translates to: YIWHKQQRLKATTHVELLLVSGR*FAQICC
Trigger: GCAACAAATCTGGGCAAAGCATCTGCCAGAAACTAG...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATCTAGTTTCTGGCAGATaGTTTGCCCAGATTTGTTGC +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNLVSGR*FAQICC
Trigger: GCAACAAATCTGGGCAAAGCATCTGCCAGAAACTAG...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTTGCATCCTCACATGGTaGAGAGAGCAAGCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFCILTW*REQAGF
Trigger: AAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCA...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGAGGGTTGTTCTTTGATTaGAGCTTTCCCCACATTTAT +
Preference number: 4 (lower is better)
Translates to: RLKATTHVELLTGKEPSRGLFFD*SFPHIY
Trigger: ATAAATGTGGGGAAAGCTTCAATCAAAGAACAACCC...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACATGTTGAATAAGGGATaGATGCCGATTGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDMLNKG*MPIADL
Trigger: AAGGTCTGCAATCGGCATTCATCCCTTATTCAACAT...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTGATTTCTCCTGGCTCTaGAATCCTCATTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSDFSWL*NPHSSL
Trigger: TAGTGAAGAATGAGGATTTCAGAGCCAGGAGAAATC...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATGATTTCTCCTGGCTCTaGAATCCTCATTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHDFSWL*NPHSSL
Trigger: TAGTGAAGAATGAGGATTTCAGAGCCAGGAGAAATC...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACGATTTCTCCTGGCTCTaGAATCCTCATTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDDFSWL*NPHSSL
Trigger: TAGTGAAGAATGAGGATTTCAGAGCCAGGAGAAATC...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TTAGACGTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAACACATGTTGAACTGCTaGCAGGAAAAGAACCCAGTA +
Preference number: 4 (lower is better)
Translates to: LDVHTMKIIYPHIRGDGKHMLNC*QEKNPV
Trigger: TACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTG...TTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAACGTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTAGCTACTACACATGTTaGACTGCTGACAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSSYYTC*TADRKR
Trigger: TCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCT...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAAGCTACTACACATGTTaGACTGCTGACAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: LVLLLIACLSQVRRSHHESYYTC*TADRKR
Trigger: TCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCT...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTACAAACAGCAGAGACTaGAAGCTACTACACATGTTG +
Preference number: 4 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSTNSRD*KLLHML
Trigger: CAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGT...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGGCCAATTACTGGCTGTaGAAAAGTTACACAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMANYWL*KSYTKP
Trigger: AGGCTTTGTGTAACTTTTTCACAGCCAGTAATTGGC...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS-3UTR GCA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAACCCAAATGTTATAGGTaGCTTGGATTTGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: LVLLLIACLSQVRRSHHEPKCYR*LGFGFP
Trigger: GGGAAATCCAAATCCAAGGCACCTATAACATTTGGG...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACCCCAAATGTTATAGGTaGCTTGGATTTGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDPKCYR*LGFGFP
Trigger: GGGAAATCCAAATCCAAGGCACCTATAACATTTGGG...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR GCA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGACTAGTTTCTGGCAGATaGTTTGCCCAGATTTGTTGC +
Preference number: 4 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRLVSGR*FAQICC
Trigger: GCAACAAATCTGGGCAAAGCATCTGCCAGAAACTAG...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTGAGAACCTAGTTTCTGGCAGATaGTTTGCCCAGATTTGTTGC +
Preference number: 4 (lower is better)
Translates to: WLKQQFTSHSSEVWKSENLVSGR*FAQICC
Trigger: GCAACAAATCTGGGCAAAGCATCTGCCAGAAACTAG...GTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TTAGACGTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAACTAGTTTCTGGCAGATaGTTTGCCCAGATTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LDVHTMKIIYPHIRGDGKLVSGR*FAQICC
Trigger: GCAACAAATCTGGGCAAAGCATCTGCCAGAAACTAG...TTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAACGTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTCTTTTCCGCACTTTCTaGACTGGCAGACATTCCCAA +
Preference number: 4 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFLFRTF*TGRHSQ
Trigger: TTGGGAATGTCTGCCAGTGCAGAAAGTGCGGAAAAG...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGGGATGAATGCCGATTaGAGACCTTCTCACATTTAT +
Preference number: 4 (lower is better)
Translates to: LVLLLIACLSQVRRSHHEGMNAD*RPSHIY
Trigger: ATAAATGTGAGAAGGTCTGCAATCGGCATTCATCCC...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp CAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGTGGCACCCTGTTTTaGCGAGAAGTTCCTTATATT +
Preference number: 4 (lower is better)
Translates to: QLKVAPCFAEKFLIFDNSSGTLF*REVPYI
Trigger: AATATAAGGAACTTCTCGGCAAAACAGGGTGCCACT...AGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGGCACCCTGTTTTaGCGAGAAGTTCCTTATATT +
Preference number: 4 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMSGTLF*REVPYI
Trigger: AATATAAGGAACTTCTCGGCAAAACAGGGTGCCACT...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAGTGGCACCCTGTTTTaGCGAGAAGTTCCTTATATT +
Preference number: 4 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDSGTLF*REVPYI
Trigger: AATATAAGGAACTTCTCGGCAAAACAGGGTGCCACT...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATAGTGGCACCCTGTTTTaGCGAGAAGTTCCTTATATT +
Preference number: 4 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHSGTLF*REVPYI
Trigger: AATATAAGGAACTTCTCGGCAAAACAGGGTGCCACT...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTGGAACATGGTCATTaGTTGCCTTCCTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSLEHGH*LPSFSF
Trigger: AAAGGAAAAGGAAGGCAAGCAATGACCATGTTCCAG...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS-3UTR CCA 90 bp GTAGGAGCTTTTTGTTGTGCAGAAACTAGTTTCTGGCAGATGCTTTGCCCAGATCTTTGGCTTTCAAAGTaGGACATATCATCAAATGGT +
Preference number: 4 (lower is better)
Translates to: VGAFCCAETSFWQMLCPDLWLSK*DISSNG
Trigger: ACCATTTGATGATATGTCCCACTTTGAAAGCCAAAG...ATCTGGGCAAAGCATCTGCCAGAAACTAGTTTCTGCACAACAAAAAGCTCCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CCA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATAAGCAGATCAGTTaGCTTTCCCCTTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: LVLLLIACLSQVRRSHHEDKQIS*LSPSNY
Trigger: GTAATTGGAAGGGGAAAGCCAACTGATCTGCTTATC...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504904.8
ENST00000591790.5
CDS-3UTR TCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATCCAGATTTGTTGCATTaGTTTGGAGGTAACTTCTTG +
Preference number: 4 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHPDLLH*FGGNFL
Trigger: CAAGAAGTTACCTCCAAATCAATGCAACAAATCTGG...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATATAAGGGTTGTTCTTTaGTTGAAGCTTTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHIRVVL*LKLSPH
Trigger: ATGTGGGGAAAGCTTCAATCAAAGAACAACCCTTAT...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTATAAGGGTTGTTCTTTaGTTGAAGCTTTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: QLKVAPCFAEKFLIFDNSIRVVL*LKLSPH
Trigger: ATGTGGGGAAAGCTTCAATCAAAGAACAACCCTTAT...AGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTCTTTGCTGTAGACTCTaGCTTAAGGCCTTCGCATTT +
Preference number: 4 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFLCCRL*LKAFAF
Trigger: AAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAG...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGAATGTTGAATAAGGGATaGATGCCGATTGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRMLNKG*MPIADL
Trigger: AAGGTCTGCAATCGGCATTCATCCCTTATTCAACAT...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGAATGTTCAATAAGAAATaGTTGGCGGCCGAAAACTTT +
Preference number: 4 (lower is better)
Translates to: RLKATTHVELLTGKEPSRMFNKK*LAAENF
Trigger: AAAGTTTTCGGCCGCCAATCATTTCTTATTGAACAT...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATGATCTTCATTCACAATaGCTGACCAAACTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNDLHSQ*LTKLLS
Trigger: ACTCAGAAGTTTGGTCAGTCATTGTGAATGAAGATC...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAGTAACATCACATGATCTTCATTCACAATaGCTGACCAAACTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PHLILIASQMPHFQVTSHDLHSQ*LTKLLS
Trigger: ACTCAGAAGTTTGGTCAGTCATTGTGAATGAAGATC...ATGTGATGTTACTTGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTGATCTTCATTCACAATaGCTGACCAAACTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QLKVAPCFAEKFLIFDNSDLHSQ*LTKLLS
Trigger: ACTCAGAAGTTTGGTCAGTCATTGTGAATGAAGATC...AGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TTAGACGTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGATTTCTCCTGGCTCTaGAATCCTCATTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: LDVHTMKIIYPHIRGDGKDFSWL*NPHSSL
Trigger: TAGTGAAGAATGAGGATTTCAGAGCCAGGAGAAATC...TTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAACGTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTGAGAACAGCTACTACACATGTTaGACTGCTGACAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: WLKQQFTSHSSEVWKSENSYYTC*TADRKR
Trigger: TCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCT...GTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGAGGGATGAATGCCGATTaGAGACCTTCTCACATTTAT +
Preference number: 4 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRGMNAD*RPSHIY
Trigger: ATAAATGTGAGAAGGTCTGCAATCGGCATTCATCCC...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTGAGAACGGGATGAATGCCGATTaGAGACCTTCTCACATTTAT +
Preference number: 4 (lower is better)
Translates to: WLKQQFTSHSSEVWKSENGMNAD*RPSHIY
Trigger: ATAAATGTGAGAAGGTCTGCAATCGGCATTCATCCC...GTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGAATCACCAATGACTTTTaGTCTTTGGCTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: RLKATTHVELLTGKEPSRITNDF*SLAFKV
Trigger: CACTTTGAAAGCCAAAGAGCAAAAGTCATTGGTGAT...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGACTCCATATATTAGCTaGGGCTGCCATAACAAAACA +
Preference number: 4 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMTPYIS*GCHNKT
Trigger: TGTTTTGTTATGGCAGCCCCAGCTAATATATGGAGT...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACACTCCATATATTAGCTaGGGCTGCCATAACAAAACA +
Preference number: 4 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDTPYIS*GCHNKT
Trigger: TGTTTTGTTATGGCAGCCCCAGCTAATATATGGAGT...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATCTGGAGGAGATAAATTaGTGTAAATTCAATGGAGGG +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNLEEIN*CKFNGG
Trigger: CCCTCCATTGAATTTACACCAATTTATCTCCTCCAG...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS-3UTR TCA 90 bp TGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTGAGAACGGGTTGTTCTTTGATTaGAGCTTTCCCCACATTTAT +
Preference number: 4 (lower is better)
Translates to: WLKQQFTSHSSEVWKSENGLFFD*SFPHIY
Trigger: ATAAATGTGGGGAAAGCTTCAATCAAAGAACAACCC...GTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTGGATTCTCTAAATGGTaGCTTCTTTGCTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFGFSKW*LLCCRL
Trigger: GAGTCTACAGCAAAGAAGTCACCATTTAGAGAATCC...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTATGTTGAATAAGGGATaGATGCCGATTGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFMLNKG*MPIADL
Trigger: AAGGTCTGCAATCGGCATTCATCCCTTATTCAACAT...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TTAGACGTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGGTCAAAATCACCAATaGCTTTTGCTCTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LDVHTMKIIYPHIRGDGKGQNHQ*LLLFGF
Trigger: AAAGCCAAAGAGCAAAAGTCATTGGTGATTTTGACC...TTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAACGTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTGAGAACGGTCAAAATCACCAATaGCTTTTGCTCTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: WLKQQFTSHSSEVWKSENGQNHQ*LLLFGF
Trigger: AAAGCCAAAGAGCAAAAGTCATTGGTGATTTTGACC...GTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp TGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTGAGAACGATCTTCATTCACAATaGCTGACCAAACTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: WLKQQFTSHSSEVWKSENDLHSQ*LTKLLS
Trigger: ACTCAGAAGTTTGGTCAGTCATTGTGAATGAAGATC...GTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTACAAACAGCAGAGACTaGAAGCTACTACACATGTTG +
Preference number: 4 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFTNSRD*KLLHML
Trigger: CAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGT...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR TCA 90 bp CCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAGTAACATCACATCCAAATTTGAGAAGATaGTTCTTGTCTGATATGGTC +
Preference number: 4 (lower is better)
Translates to: PHLILIASQMPHFQVTSHPNLRR*FLSDMV
Trigger: GACCATATCAGACAAGAATCATCTTCTCAAATTTGG...ATGTGATGTTACTTGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504904.8
ENST00000591790.5
CDS-3UTR GCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTTTGCCCAGATTTGTTaGATTGATTTGGAGGTAACT +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNFAQIC*IDLEVT
Trigger: AGTTACCTCCAAATCAATGCAACAAATCTGGGCAAA...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAATTTGCCCAGATTTGTTaGATTGATTTGGAGGTAACT +
Preference number: 4 (lower is better)
Translates to: LVLLLIACLSQVRRSHHEFAQIC*IDLEVT
Trigger: AGTTACCTCCAAATCAATGCAACAAATCTGGGCAAA...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TTAGACGTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGGTTTCTTCCCTGAATaGCCTTTCTTAGGTTTTACT +
Preference number: 4 (lower is better)
Translates to: LDVHTMKIIYPHIRGDGKGFFPE*PFLGFT
Trigger: AGTAAAACCTAAGAAAGGGCATTCAGGGAAGAAACC...TTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAACGTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTGAGAACGGTTTCTTCCCTGAATaGCCTTTCTTAGGTTTTACT +
Preference number: 4 (lower is better)
Translates to: WLKQQFTSHSSEVWKSENGFFPE*PFLGFT
Trigger: AGTAAAACCTAAGAAAGGGCATTCAGGGAAGAAACC...GTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTGGGATGAATGCCGATTaGAGACCTTCTCACATTTAT +
Preference number: 4 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFGMNAD*RPSHIY
Trigger: ATAAATGTGAGAAGGTCTGCAATCGGCATTCATCCC...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTATCACCAATGACTTTTaGTCTTTGGCTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSITNDF*SLAFKV
Trigger: CACTTTGAAAGCCAAAGAGCAAAAGTCATTGGTGAT...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCATCTAATCCTAATTaGCTCCCAAATGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNSSNPN*LPNASF
Trigger: AAATGAGGCATTTGGGAGGCAATTAGGATTAGATGA...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTTTGGCTTTCAAAGTaGGACATATCATCAAATGGT +
Preference number: 4 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSLWLSK*DISSNG
Trigger: ACCATTTGATGATATGTCCCACTTTGAAAGCCAAAG...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGAAAACTCTATGTaGATTTTCTACAGTACAGGG +
Preference number: 4 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMSENSM*IFYSTG
Trigger: CCCTGTACTGTAGAAAATCCACATAGAGTTTTCACT...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS-3UTR TCA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGAATGTTCAATAAGAAATaGTTGGCGGCCGAAAACTTT +
Preference number: 4 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRMFNKK*LAAENF
Trigger: AAAGTTTTCGGCCGCCAATCATTTCTTATTGAACAT...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTGGTTTCTTCCCTGAATaGCCTTTCTTAGGTTTTACT +
Preference number: 4 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFGFFPE*PFLGFT
Trigger: AGTAAAACCTAAGAAAGGGCATTCAGGGAAGAAACC...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGAATCACCAATGACTTTTaGTCTTTGGCTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRITNDF*SLAFKV
Trigger: CACTTTGAAAGCCAAAGAGCAAAAGTCATTGGTGAT...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp TTAGACGTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAATCATCTAATCCTAATTaGCTCCCAAATGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: LDVHTMKIIYPHIRGDGKSSNPN*LPNASF
Trigger: AAATGAGGCATTTGGGAGGCAATTAGGATTAGATGA...TTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAACGTCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CCA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGACTTTGGCTTTCAAAGTaGGACATATCATCAAATGGT +
Preference number: 4 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRLWLSK*DISSNG
Trigger: ACCATTTGATGATATGTCCCACTTTGAAAGCCAAAG...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
3UTR CAA 72 bp AAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTaGATAATTCTAGATCTGAGAAACAGACTCAAATTC +
Preference number: 4 (lower is better)
Translates to: KWHPVLPRSSLY*IILDLRNRLKF
Trigger: GAATTTGAGTCTGTTTCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR GCA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTTCATCTAATCCTAATTaGCTCCCAAATGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFSSNPN*LPNASF
Trigger: AAATGAGGCATTTGGGAGGCAATTAGGATTAGATGA...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS CCA 90 bp ACAGGCACACACGGCTCGCCTCACACGCGGCGCCAACTTCACACTTaGGCGCACAAGCCCCGAGAACCACAGCAGCGAAGGGCGCAAACC +
Preference number: 5 (lower is better)
Translates to: TGTHGSPHTRRQLHT*AHKPREPQQRRAQT
Trigger: GGTTTGCGCCCTTCGCTGCTGTGGTTCTCGGGGCTTGTGCGCCCAAGTGTGAAGTTGGCGCCGCGTGTGAGGCGAGCCGTGTGTGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589946.1
CDS GCA 90 bp CGTGCCCCGCCTTCCCCAGCTCCCTTACTCTTCTCCCTGTCATCATaGCTTCGGTCTGTCCATGCGCTTGCATCACGGTCCTCTCAATCA +
Preference number: 5 (lower is better)
Translates to: RAPPSPAPLLFSLSS*LRSVHALASRSSQS
Trigger: TGATTGAGAGGACCGTGATGCAAGCGCATGGACAGACCGAAGGCATGATGACAGGGAGAAGAGTAAGGGAGCTGGGGAAGGCGGGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS GCA 90 bp CTTACTCTTCTCCCTGTCATCATGCCTTCGGTCTGTCCATGCGCTTaGATCACGGTCCTCTCAATCAGAGTGATTTTGCCCCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LTLLPVIMPSVCPCA*ITVLSIRVILPLQG
Trigger: CCCCTGCAGGGGCAAAATCACTCTGATTGAGAGGACCGTGATGCAAGCGCATGGACAGACCGAAGGCATGATGACAGGGAGAAGAGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS GCA 90 bp AGCTCCCTTACTCTTCTCCCTGTCATCATGCCTTCGGTCTGTCCATaGGCTTGCATCACGGTCCTCTCAATCAGAGTGATTTTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: SSLTLLPVIMPSVCP*ACITVLSIRVILPL
Trigger: CAGGGGCAAAATCACTCTGATTGAGAGGACCGTGATGCAAGCGCATGGACAGACCGAAGGCATGATGACAGGGAGAAGAGTAAGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS TCA 90 bp TGGGGGCTGTGCTGGGTATTGAATTGGGGGAGGGTCCTGATATACTaGAAACCAGCCATTAAATGCACTGCCACAGCCTCATTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: WGLCWVLNWGRVLIY*KPAIKCTATASLPP
Trigger: AGGAGGCAATGAGGCTGTGGCAGTGCATTTAATGGCTGGTTTTCAGTATATCAGGACCCTCCCCCAATTCAATACCCAGCACAGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CCA 90 bp AAAGGCACAAAGCTATGTCCTCCTGAGGTGAGGACGGCTGGAACCTaGATGGGAACATGCTTCAAAGAGTTACTGAACCGTGGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: KGTKLCPPEVRTAGT*MGTCFKELLNRGCA
Trigger: GGCACAACCACGGTTCAGTAACTCTTTGAAGCATGTTCCCATCCAGGTTCCAGCCGTCCTCACCTCAGGAGGACATAGCTTTGTGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS-3UTR CAA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCATAGGTGCCTTGGATTaGGATTTCCCCCGTGCAGAA +
Preference number: 5 (lower is better)
Translates to: SCSVDSWLLPASSHGAESIGALD*DFPRAE
Trigger: TTCTGCACGGGGGAAATCCAAATCCAAGGCACCTAT...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CAA 90 bp ATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGACGTAGTCTCGCTCATAATTTCCACGTGTaGTGGGAGGGACCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: MVQRASRLSDVFLRRSLAHNFHV*WEGPGG
Trigger: CCCACCGGGTCCCTCCCACAACACGTGGAAATTATG...AGCGAGACTACGTCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504904.8
ENST00000591790.5
CDS-3UTR CAA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGACATAATTTCCACGTGTaGTGGGAGGGACCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: WHKQQRLKATTHVELLTGHNFHV*WEGPGG
Trigger: CCCACCGGGTCCCTCCCACAACACGTGGAAATTATG...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504904.8
ENST00000591790.5
CDS GCA 90 bp AGCTGTCACAGGAAGAACACAGGCTATGCATATGCATGTCTAGCCTaGCATTTCCCCACTTTGCCCGGGAACACATTAGGTTACCTCACT +
Preference number: 5 (lower is better)
Translates to: SCHRKNTGYAYACLA*HFPTLPGNTLGYLT
Trigger: AGTGAGGTAACCTAATGTGTTCCCGGGCAAAGTGGGGAAATGGCAGGCTAGACATGCATATGCATAGCCTGTGTTCTTCCTGTGACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS GCA 90 bp TTGGTCTTCCTGGTGACCAACCCTATCCTGAAGCTACCCAGGGGCTaGCAGCCACCAGCCATCTCATTAGCATACAAAAGACATGTAAAA +
Preference number: 5 (lower is better)
Translates to: LVFLVTNPILKLPRG*QPPAISLAYKRHVK
Trigger: TTTTACATGTCTTTTGTATGCTAATGAGATGGCTGGTGGCTGGCAGCCCCTGGGTAGCTTCAGGATAGGGTTGGTCACCAGGAAGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS-3UTR CAA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCATTGAAAGACTGACATaGACTCAAGGCCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: SCSVDSWLLPASSHGAESIERLT*TQGLPT
Trigger: TGTGGGAAGGCCTTGAGTCAATGTCAGTCTTTCAAT...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCAGGGATGAATGCCGATaGCAGACCTTCTCACATTTA +
Preference number: 5 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVRDECR*QTFSHL
Trigger: TAAATGTGAGAAGGTCTGCAATCGGCATTCATCCCT...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGTGGCACCCTGTTTaGCCGAGAAGTTCCTTATAT +
Preference number: 5 (lower is better)
Translates to: SCSVDSWLLPASSHGAESKWHPV*PRSSLY
Trigger: ATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTT...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAAGTGGCACCCTGTTTaGCCGAGAAGTTCCTTATAT +
Preference number: 5 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPKWHPV*PRSSLY
Trigger: ATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTT...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCAAGTGGCACCCTGTTTaGCCGAGAAGTTCCTTATAT +
Preference number: 5 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVKWHPV*PRSSLY
Trigger: ATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTT...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTTCAATGGAGGGCAATTaGGCAATGTCTTTAAGACCG +
Preference number: 5 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSSMEGN*AMSLRP
Trigger: CGGTCTTAAAGACATTGCCAAATTGCCCTCCATTGA...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS-3UTR CAA 90 bp TGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATTCTAGATCTGAGAGGTGCTGGCACCTCCTaGGCTTCTGGGGAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: WHPVLPRSSLYLIILDLRGAGTS*ASGEAS
Trigger: TGAGGCCTCCCCAGAAGCCAAGGAGGTGCCAGCACC...TCTCAGATCTAGAATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS GCA 90 bp AGTCAAACTCTTAGATTCCCCAATCAAGTGATACCAAAGGGTCACTaGTGGTGGTCCTTCCTGGCTCTGGAGTTGACCAAAATGCCCATG +
Preference number: 5 (lower is better)
Translates to: SQTLRFPNQVIPKGH*WWSFLALELTKMPM
Trigger: CATGGGCATTTTGGTCAACTCCAGAGCCAGGAAGGACCACCAGCAGTGACCCTTTGGTATCACTTGATTGGGGAATCTAAGAGTTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS GCA 90 bp ATGCACTGCCACAGCCTCATTGCCTCCTTTGGGCCAGTCAGCTTTTaGTGTACCAGCTGTCAAATATTCAAAAATCACTCCTGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: MHCHSLIASFGPVSF*CTSCQIFKNHSWPE
Trigger: TTCAGGCCAGGAGTGATTTTTGAATATTTGACAGCTGGTACAGCAAAAGCTGACTGGCCCAAAGGAGGCAATGAGGCTGTGGCAGTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS-3UTR CAA 90 bp GGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCAGGACTGAATTTTTGTaGCAGCCACTCTTTCGTGTA +
Preference number: 5 (lower is better)
Translates to: GFFLHPHMVQRASRLSDVRTEFL*QPLFRV
Trigger: TACACGAAAGAGTGGCTGCAACAAAAATTCAGTCCT...GACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAGGACTGAATTTTTGTaGCAGCCACTCTTTCGTGTA +
Preference number: 5 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPRTEFL*QPLFRV
Trigger: TACACGAAAGAGTGGCTGCAACAAAAATTCAGTCCT...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCACTAGGACTGAATTTTaGTTGCAGCCACTCTTTCGT +
Preference number: 5 (lower is better)
Translates to: SCSVDSWLLPASSHGAESTRTEF*LQPLFR
Trigger: ACGAAAGAGTGGCTGCAACAAAAATTCAGTCCTAGT...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGATTCTCACCCACAAGTTaGTCAGCTGAAAGTGGCACC +
Preference number: 5 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRFSPTS*SAESGT
Trigger: GGTGCCACTTTCAGCTGACAAACTTGTGGGTGAGAA...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCGAACATGGTCATTGCTaGCCTTCCTTTTCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: SCSVDSWLLPASSHGAESEHGHC*PSFSFS
Trigger: TGAAAAGGAAAAGGAAGGCAAGCAATGACCATGTTC...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS TCA 90 bp ATATGGAAACATCCCTTAGTCCCTGACACTTCAAAGTTCTGTTCTTaGCCCCATGGGCTCCCTAGGGACATCTCCATCAGGAAGATCCTT +
Preference number: 5 (lower is better)
Translates to: IWKHPLVPDTSKFCS*PHGLPRDISIRKIL
Trigger: AAGGATCTTCCTGATGGAGATGTCCCTAGGGAGCCCATGGGGTCAAGAACAGAACTTTGAAGTGTCAGGGACTAAGGGATGTTTCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS-3UTR CAA 90 bp TTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAACTAGGACTGAATTTTaGTTGCAGCCACTCTTTCGT +
Preference number: 5 (lower is better)
Translates to: FCRQLASSCILTWCREQATRTEF*LQPLFR
Trigger: ACGAAAGAGTGGCTGCAACAAAAATTCAGTCCTAGT...TGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp ACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTAAGACTGATTTCTTTTaGAAGCCTCTCCCACATTTA +
Preference number: 5 (lower is better)
Translates to: TAGFFLHPHMVQRASRLSKTDFF*KPLPHL
Trigger: TAAATGTGGGAGAGGCTTCAAAAAGAAATCAGTCTT...AGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGAAGGGATGAATGCCGATaGCAGACCTTCTCACATTTA +
Preference number: 5 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRRDECR*QTFSHL
Trigger: TAAATGTGAGAAGGTCTGCAATCGGCATTCATCCCT...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCACCAAGTAACATCACATaGATGGTGAGGATTTTAACA +
Preference number: 5 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPPSNIT*MVRILT
Trigger: TGTTAAAATCCTCACCATCAATGTGATGTTACTTGG...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp TCCTGTTCTGTAGACAGCTGGCTTCTTCCTGCATCCTCACATGGTGCAGAGAGCCCAAGTAACATCACATaGATGGTGAGGATTTTAACA +
Preference number: 5 (lower is better)
Translates to: SCSVDSWLLPASSHGAESPSNIT*MVRILT
Trigger: TGTTAAAATCCTCACCATCAATGTGATGTTACTTGG...GCTCTCTGCACCATGTGAGGATGCAGGAAGAAGCCAGCTGTCTACAGAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp TCCCATCACGAGGGCTCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAGAAAGAACAGCAGTTaGATATTAGGTAATCCTGGA +
Preference number: 5 (lower is better)
Translates to: SHHEGSTLMTSSNPNCLPRKNSS*ILGNPG
Trigger: TCCAGGATTACCTAATATCAAACTGCTGTTCTTTCT...TGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGAGCCCTCGTGATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS CCA 90 bp GAAAACCAGCCATTAAATGCACTGCCACAGCCTCATTGCCTCCTTTaGGCCAGTCAGCTTTTGCTGTACCAGCTGTCAAATATTCAAAAA +
Preference number: 5 (lower is better)
Translates to: ENQPLNALPQPHCLL*ASQLLLYQLSNIQK
Trigger: TTTTTGAATATTTGACAGCTGGTACAGCAAAAGCTGACTGGCCCAAAGGAGGCAATGAGGCTGTGGCAGTGCATTTAATGGCTGGTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS-3UTR CAA 90 bp TGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAATTGAAAGACTGACATaGACTCAAGGCCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: WHKQQRLKATTHVELLTGIERLT*TQGLPT
Trigger: TGTGGGAAGGCCTTGAGTCAATGTCAGTCTTTCAAT...TCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp TCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCAAGGGATGAATGCCGATaGCAGACCTTCTCACATTTA +
Preference number: 5 (lower is better)
Translates to: STLMTSSNPNCLPNASFPRDECR*QTFSHL
Trigger: TAAATGTGAGAAGGTCTGCAATCGGCATTCATCCCT...TGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGATTCTCACCCACAAGTTaGTCAGCTGAAAGTGGCACC +
Preference number: 5 (lower is better)
Translates to: RLKATTHVELLTGKEPSRFSPTS*SAESGT
Trigger: GGTGCCACTTTCAGCTGACAAACTTGTGGGTGAGAA...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS TCA 90 bp TCAAGGGTCAACCACATACCAAGCATCCAAGAGACCAACGAAGACTaGGACCCACTAAAAAGGCTGAGATTAGAATTCTTATCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SRVNHIPSIQETNED*DPLKRLRLEFLSSA
Trigger: AGCACTGGATAAGAATTCTAATCTCAGCCTTTTTAGTGGGTCTCAGTCTTCGTTGGTCTCTTGGATGCTTGGTATGTGGTTGACCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS CCA 90 bp TCAGCTATCCAGAAGCTCTTCAAACCCTGTCCTTCTGAGTTTTTATaGTGGCTTCATTACACAGGCAAGATTAAACTACTGGCCCTTGGT +
Preference number: 5 (lower is better)
Translates to: SAIQKLFKPCPSEFL*WLHYTGKIKLLALG
Trigger: ACCAAGGGCCAGTAGTTTAATCTTGCCTGTGTAATGAAGCCACCATAAAAACTCAGAAGGACAGGGTTTGAAGAGCTTCTGGATAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS-3UTR CAA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAATAGGTGCCTTGGATTaGGATTTCCCCCGTGCAGAA +
Preference number: 5 (lower is better)
Translates to: LVLLLIACLSQVRRSHHEIGALD*DFPRAE
Trigger: TTCTGCACGGGGGAAATCCAAATCCAAGGCACCTAT...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CAA 90 bp GTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGTAAGGATAGGTGCCTTGGATTaGGATTTCCCCCGTGCAGAA +
Preference number: 5 (lower is better)
Translates to: VHTMKIIYPHIRGDGKVRIGALD*DFPRAE
Trigger: TTCTGCACGGGGGAAATCCAAATCCAAGGCACCTAT...CCTTACTTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CAA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATATAGGTGCCTTGGATTaGGATTTCCCCCGTGCAGAA +
Preference number: 5 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHIGALD*DFPRAE
Trigger: TTCTGCACGGGGGAAATCCAAATCCAAGGCACCTAT...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CAA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGTTCTCACCCACAAGTTaGTCAGCTGAAAGTGGCACC +
Preference number: 5 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMFSPTS*SAESGT
Trigger: GGTGCCACTTTCAGCTGACAAACTTGTGGGTGAGAA...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp TCCACCCTCATGACCTCATCTAATCCTAATTGCCTCCCAAATGCCTCATTTCCATTGAGCCATGTTAGTTaGAATTGTGAGGGTCCACTT +
Preference number: 5 (lower is better)
Translates to: STLMTSSNPNCLPNASFPLSHVS*NCEGPL
Trigger: AAGTGGACCCTCACAATTCAAACTAACATGGCTCAA...TGGAAATGAGGCATTTGGGAGGCAATTAGGATTAGATGAGGTCATGAGGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS CCA 90 bp TTGTCCCACCTTTCTGGACCAAACCAACGTACATCTCACACATACTaGCTGATGTCTCATGTCTCCCAAAAACATATAAAACCTAGCTGT +
Preference number: 5 (lower is better)
Translates to: LSHLSGPNQRTSHTY*LMSHVSQKHIKPSC
Trigger: ACAGCTAGGTTTTATATGTTTTTGGGAGACATGAGACATCAGCCAGTATGTGTGAGATGTACGTTGGTTTGGTCCAGAAAGGTGGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS-3UTR CAA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGAATTGAAAGACTGACATaGACTCAAGGCCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: RLKATTHVELLTGKEPSRIERLT*TQGLPT
Trigger: TGTGGGAAGGCCTTGAGTCAATGTCAGTCTTTCAAT...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp CTGCATCCTCACATGGTGCAGAGAGCAAGCAGGCTTTCTGATGTCTTTTTGAGAAAGACTGATTTCTTTTaGAAGCCTCTCCCACATTTA +
Preference number: 5 (lower is better)
Translates to: LHPHMVQRASRLSDVFLRKTDFF*KPLPHL
Trigger: TAAATGTGGGAGAGGCTTCAAAAAGAAATCAGTCTT...TCTCAAAAAGACATCAGAAAGCCTGCTTGCTCTCTGCACCATGTGAGGATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS CCA 90 bp CTCACCTCTGCTGTTAGGATATTTACATGTGATGTCTTCGGTAACTaGAACATGGTCATTGCTTGCCTTCCTTTTCCTTTTCAACTCACA +
Preference number: 5 (lower is better)
Translates to: LTSAVRIFTCDVFGN*NMVIACLPFPFQLT
Trigger: TGTGAGTTGAAAAGGAAAAGGAAGGCAAGCAATGACCATGTTCCAGTTACCGAAGACATCACATGTAAATATCCTAACAGCAGAGGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS-3UTR CAA 90 bp TTGGTTCTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAATTGAAAGACTGACATaGACTCAAGGCCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: LVLLLIACLSQVRRSHHEIERLT*TQGLPT
Trigger: TGTGGGAAGGCCTTGAGTCAATGTCAGTCTTTCAAT...TTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAGAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp ATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAAGTGGCACCCTGTTTaGCCGAGAAGTTCCTTATAT +
Preference number: 5 (lower is better)
Translates to: IRGDGKVRFLLLHTIMSDKWHPV*PRSSLY
Trigger: ATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTT...GTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp CCTCATATCCGTGGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGACTGGAACATGGTCATaGCTTGCCTTCCTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: PHIRGDGKVRFLLLHTIMTGTWS*LAFLFL
Trigger: AAGGAAAAGGAAGGCAAGCAATGACCATGTTCCAGT...CATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCCACGGATATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS GCA 90 bp AACAGCAGTTTGATATTAGGTAATCCTGGATTCAAAGCTTGCCTCTaGCAATTACTGGCTGTGAAAAAGTTACACAAAGCCTGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: NSSLILGNPGFKACL*QLLAVKKLHKACLL
Trigger: GAGCAAACAGGCTTTGTGTAACTTTTTCACAGCCAGTAATTGGCAGAGGCAAGCTTTGAATCCAGGATTACCTAATATCAAACTGCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS-3UTR CAA 90 bp TTAGACGTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAAATGTTATAGGTGCCTaGGATTTGGATTTCCCCCGT +
Preference number: 5 (lower is better)
Translates to: LDVHTMKIIYPHIRGDGKNVIGA*DLDFPR
Trigger: ACGGGGGAAATCCAAATCCAAGGCACCTATAACATT...TTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAACGTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
CDS-3UTR CAA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTAGGACTGAATTTTTGTaGCAGCCACTCTTTCGTGTA +
Preference number: 5 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSRTEFL*QPLFRV
Trigger: TACACGAAAGAGTGGCTGCAACAAAAATTCAGTCCT...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp GTTCACACCATGAAGATCATATATCCTCATATCCGTGGAGATGGTAAAGTAAGGAGGACTGAATTTTTGTaGCAGCCACTCTTTCGTGTA +
Preference number: 5 (lower is better)
Translates to: VHTMKIIYPHIRGDGKVRRTEFL*QPLFRV
Trigger: TACACGAAAGAGTGGCTGCAACAAAAATTCAGTCCT...CCTTACTTTACCATCTCCACGGATATGAGGATATATGATCTTCATGGTGTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp TGTCAGCTGAAAGTGGCACCCTGTTTTGCCGAGAAGTTCCTTATATTTGATAATACTAGGACTGAATTTTaGTTGCAGCCACTCTTTCGT +
Preference number: 5 (lower is better)
Translates to: CQLKVAPCFAEKFLIFDNTRTEF*LQPLFR
Trigger: ACGAAAGAGTGGCTGCAACAAAAATTCAGTCCTAGT...ATTATCAAATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTTTCAGCTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp TATATTTGGCACAAACAGCAGAGACTGAAAGCTACTACACATGTTGAACTGCTGACTAGGACTGAATTTTaGTTGCAGCCACTCTTTCGT +
Preference number: 5 (lower is better)
Translates to: YIWHKQQRLKATTHVELLTRTEF*LQPLFR
Trigger: ACGAAAGAGTGGCTGCAACAAAAATTCAGTCCTAGT...CAGCAGTTCAACATGTGTAGTAGCTTTCAGTCTCTGCTGTTTGTGCCAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp AATGGTGACTTCTTTGCTGTAGACTCTGACTTAAGGCCTTCGCATTTTCAGGGACCAAGTAACATCACATaGATGGTGAGGATTTTAACA +
Preference number: 5 (lower is better)
Translates to: NGDFFAVDSDLRPSHFQGPSNIT*MVRILT
Trigger: TGTTAAAATCCTCACCATCAATGTGATGTTACTTGG...TCCCTGAAAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAGAAGTCACCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591790.5
ENST00000592189.5
CDS TCA 90 bp TGTCACAGGTGTGTCCTTAGCCTTGGCAAAATAAACTTTCTAAATTaGCTGAGACTTGTCTCCGATATTTTGGGTTCACAGACATCACTT +
Preference number: 5 (lower is better)
Translates to: CHRCVLSLGKINFLN*LRLVSDILGSQTSL
Trigger: AAGTGATGTCTGTGAACCCAAAATATCGGAGACAAGTCTCAGTCAATTTAGAAAGTTTATTTTGCCAAGGCTAAGGACACACCTGTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS-3UTR CAA 90 bp TGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCTGAGAACACTAGGACTGAATTTTaGTTGCAGCCACTCTTTCGT +
Preference number: 5 (lower is better)
Translates to: WLKQQFTSHSSEVWKSENTRTEF*LQPLFR
Trigger: ACGAAAGAGTGGCTGCAACAAAAATTCAGTCCTAGT...GTTCTCAGACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTATTGAAAGACTGACATaGACTCAAGGCCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFIERLT*TQGLPT
Trigger: TGTGGGAAGGCCTTGAGTCAATGTCAGTCTTTCAAT...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp AGACTGAAAGCTACTACACATGTTGAACTGCTGACAGGAAAAGAACCCAGTAGAAAGACTGATTTCTTTTaGAAGCCTCTCCCACATTTA +
Preference number: 5 (lower is better)
Translates to: RLKATTHVELLTGKEPSRKTDFF*KPLPHL
Trigger: TAAATGTGGGAGAGGCTTCAAAAAGAAATCAGTCTT...TCTACTGGGTTCTTTTCCTGTCAGCAGTTCAACATGTGTAGTAGCTTTCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTAGGGATGAATGCCGATaGCAGACCTTCTCACATTTA +
Preference number: 5 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFRDECR*QTFSHL
Trigger: TAAATGTGAGAAGGTCTGCAATCGGCATTCATCCCT...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp GGAGATGGTAAAGTAAGGTTTCTACTGTTACACACCATTATGAGTGACAACTTTAAGTGGCACCCTGTTTaGCCGAGAAGTTCCTTATAT +
Preference number: 5 (lower is better)
Translates to: GDGKVRFLLLHTIMSDNFKWHPV*PRSSLY
Trigger: ATATAAGGAACTTCTCGGCAAAACAGGGTGCCACTT...AAAGTTGTCACTCATAATGGTGTGTAACAGTAGAAACCTTACTTTACCATCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS-3UTR CAA 90 bp AGACTGGGTGGCTTAAACAACAATTTACTTCTCACAGTTCTGAAGTCTGGAAGTCGTTATTTACCCCTGTaGTACTCTTTAATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: RLGGLNNNLLLTVLKSGSRYLPL*YSLIQQ
Trigger: TTGCTGGATTAAAGAGTACAACAGGGGTAAATAACG...ACTTCCAGACTTCAGAACTGTGAGAAGTAAATTGTTGTTTAAGCCACCCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS-3UTR CAA 90 bp CTTTTACTGATAGCTTGTCTCAGCCAAGTTAGACGTTCACACCATGAAGATCATAAGACTGATTTCTTTTaGAAGCCTCTCCCACATTTA +
Preference number: 5 (lower is better)
Translates to: LLLIACLSQVRRSHHEDHKTDFF*KPLPHL
Trigger: TAAATGTGGGAGAGGCTTCAAAAAGAAATCAGTCTT...ATGATCTTCATGGTGTGAACGTCTAACTTGGCTGAGACAAGCTATCAGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292069.10
ENST00000504904.8
ENST00000591790.5
ENST00000592189.5
ENST00000629654.1
CDS CCA 72 bp CACGGCTCGCCTCACACGCGGCGCCAACTTCACACTTaGGCGCACAAGCCCCGAGAACCACAGCAGCGAAGG +
Preference number: 6 (lower is better)
Translates to: HGSPHTRRQLHT*AHKPREPQQRR
Trigger: CCTTCGCTGCTGTGGTTCTCGGGGCTTGTGCGCCCAAGTGTGAAGTTGGCGCCGCGTGTGAGGCGAGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589946.1
CDS CAA 90 bp CACAGGCACACACGGCTCGCCTCACACGCGGCGCCAACTTCACACTaGGGCGCACAAGCCCCGAGAACCACAGCAGCGAAGGGCGCAAAC +
Preference number: 6 (lower is better)
Translates to: HRHTRLASHAAPTSH*GAQAPRTTAAKGAN
Trigger: GTTTGCGCCCTTCGCTGCTGTGGTTCTCGGGGCTTGTGCGCCCAAGTGTGAAGTTGGCGCCGCGTGTGAGGCGAGCCGTGTGTGCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589946.1
CDS CAA 72 bp ACACGGCTCGCCTCACACGCGGCGCCAACTTCACACTaGGGCGCACAAGCCCCGAGAACCACAGCAGCGAAG +
Preference number: 6 (lower is better)
Translates to: TRLASHAAPTSH*GAQAPRTTAAK
Trigger: CTTCGCTGCTGTGGTTCTCGGGGCTTGTGCGCCCAAGTGTGAAGTTGGCGCCGCGTGTGAGGCGAGCCGTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589946.1
CDS CCA 72 bp TCCCGGCTTCCCAATGGCTCCATTGTTTCCTTCGCGTaGGTCACGCAGCGATACACATCCGCGGTCCCGACA +
Preference number: 6 (lower is better)
Translates to: SRLPNGSIVSFA*VTQRYTSAVPT
Trigger: TGTCGGGACCGCGGATGTGTATCGCTGCGTGACCCACGCGAAGGAAACAATGGAGCCATTGGGAAGCCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589946.1
CDS CAA 72 bp TTCAGTAGGCTGTACAAGCATGGTGCTGGCACCTCCTaGGCTTCTGGGGAGGCCTCAGTGAGCTCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: FSRLYKHGAGTS*ASGEASVSSGA
Trigger: GGCTCCTGAGCTCACTGAGGCCTCCCCAGAAGCCAAGGAGGTGCCAGCACCATGCTTGTACAGCCTACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS TCA 72 bp TCCACGTGTTGTGGGAGGGACCCGGTGGGAGATAACTaGATCATGGGGGCGGTTTCCCCCATGCTGTTCTCA +
Preference number: 6 (lower is better)
Translates to: STCCGRDPVGDN*IMGAVSPMLFS
Trigger: TGAGAACAGCATGGGGGAAACCGCCCCCATGATTCAGTTATCTCCCACCGGGTCCCTCCCACAACACGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000504904.8
ENST00000589652.1
ENST00000591790.5
CDS GCA 72 bp CCTTCCCCAGCTCCCTTACTCTTCTCCCTGTCATCATaGCTTCGGTCTGTCCATGCGCTTGCATCACGGTCC +
Preference number: 6 (lower is better)
Translates to: PSPAPLLFSLSS*LRSVHALASRS
Trigger: GGACCGTGATGCAAGCGCATGGACAGACCGAAGGCATGATGACAGGGAGAAGAGTAAGGGAGCTGGGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS TCA 72 bp AGAAAGGGCTTTGAAAGGCACAAAGCTATGTCCTCCTaGGGTGAGGACGGCTGGAACCTCGGTCTTCCCGGG +
Preference number: 6 (lower is better)
Translates to: RKGFERHKAMSS*GEDGWNLGLPG
Trigger: CCCGGGAAGACCGAGGTTCCAGCCGTCCTCACCTCAGGAGGACATAGCTTTGTGCCTTTCAAAGCCCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504904.8
CDS GCA 72 bp CCCACTTTGCCCGGGAACACATTAGGTTACCTCACTTaGAGGATGGGGCTAGGAATACCCCTACTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: PTLPGNTLGYLT*RMGLGIPLLQG
Trigger: TCCCTGCAGTAGGGGTATTCCTAGCCCCATCCTGCAAGTGAGGTAACCTAATGTGTTCCCGGGCAAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CAA 90 bp CCTTACTCTTCTCCCTGTCATCATGCCTTCGGTCTGTCCATGCGCTaGCATCACGGTCCTCTCAATCAGAGTGATTTTGCCCCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: PYSSPCHHAFGLSMR*HHGPLNQSDFAPAG
Trigger: CCCTGCAGGGGCAAAATCACTCTGATTGAGAGGACCGTGATGCAAGCGCATGGACAGACCGAAGGCATGATGACAGGGAGAAGAGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS GCA 72 bp CTCCCTGTCATCATGCCTTCGGTCTGTCCATGCGCTTaGATCACGGTCCTCTCAATCAGAGTGATTTTGCCC +
Preference number: 6 (lower is better)
Translates to: LPVIMPSVCPCA*ITVLSIRVILP
Trigger: GGGCAAAATCACTCTGATTGAGAGGACCGTGATGCAAGCGCATGGACAGACCGAAGGCATGATGACAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CCA 72 bp CCTTTAGTCTTTCTCCCCTCCCCAGAGGTTGAAGGGTaGAGCTCAATGTCCCAACTGTCTAGTCCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: PLVFLPSPEVEG*SSMSQLSSPAL
Trigger: CAAGGCAGGACTAGACAGTTGGGACATTGAGCTCCACCCTTCAACCTCTGGGGAGGGGAGAAAGACTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CAA 72 bp TGCGCTTGCATCACGGTCCTCTCAATCAGAGTGATTTaGCCCCTGCAGGGGACATCTGACAGTGTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: CACITVLSIRVI*PLQGTSDSVWR
Trigger: TCTCCAGACACTGTCAGATGTCCCCTGCAGGGGCAAAATCACTCTGATTGAGAGGACCGTGATGCAAGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CAA 72 bp GTATGTGTGAGGTGGTGTGGAGCTTCCATGCCTTCCTaGGGAACCCTCCAGGAACCTCCATGTGTTCAGCTA +
Preference number: 6 (lower is better)
Translates to: VCVRWCGASMPS*GTLQEPPCVQL
Trigger: TAGCTGAACACATGGAGGTTCCTGGAGGGTTCCCAAGGAAGGCATGGAAGCTCCACACCACCTCACACATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS TCA 72 bp CATCCCTTAGTCCCTGACACTTCAAAGTTCTGTTCTTaGCCCCATGGGCTCCCTAGGGACATCTCCATCAGG +
Preference number: 6 (lower is better)
Translates to: HPLVPDTSKFCS*PHGLPRDISIR
Trigger: CCTGATGGAGATGTCCCTAGGGAGCCCATGGGGTCAAGAACAGAACTTTGAAGTGTCAGGGACTAAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS TCA 72 bp AGAAAGGGCTTTGAAAGGCACAAAGCTATGTCCTCCTaGGGTGAGGACGGCTGGAACCTGGATGGGAACATG +
Preference number: 6 (lower is better)
Translates to: RKGFERHKAMSS*GEDGWNLDGNM
Trigger: CATGTTCCCATCCAGGTTCCAGCCGTCCTCACCTCAGGAGGACATAGCTTTGTGCCTTTCAAAGCCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CAA 72 bp TCTCCCTGTCATCATGCCTTCGGTCTGTCCATGCGCTaGCATCACGGTCCTCTCAATCAGAGTGATTTTGCC +
Preference number: 6 (lower is better)
Translates to: SPCHHAFGLSMR*HHGPLNQSDFA
Trigger: GGCAAAATCACTCTGATTGAGAGGACCGTGATGCAAGCGCATGGACAGACCGAAGGCATGATGACAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CAA 90 bp AACACAGGCTATGCATATGCATGTCTAGCCTGCCATTTCCCCACTTaGCCCGGGAACACATTAGGTTACCTCACTTGCAGGATGGGGCTA +
Preference number: 6 (lower is better)
Translates to: NTGYAYACLACHFPT*PGNTLGYLTCRMGL
Trigger: TAGCCCCATCCTGCAAGTGAGGTAACCTAATGTGTTCCCGGGCAAAGTGGGGAAATGGCAGGCTAGACATGCATATGCATAGCCTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS GCA 72 bp ACTCTTCTCCCTGTCATCATGCCTTCGGTCTGTCCATaGGCTTGCATCACGGTCCTCTCAATCAGAGTGATT +
Preference number: 6 (lower is better)
Translates to: TLLPVIMPSVCP*ACITVLSIRVI
Trigger: AATCACTCTGATTGAGAGGACCGTGATGCAAGCGCATGGACAGACCGAAGGCATGATGACAGGGAGAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS GCA 72 bp GAAAACCAGCCATTAAATGCACTGCCACAGCCTCATTaGCTCCTTTGGGCCAGTCAGCTTTTGCTGTACCAG +
Preference number: 6 (lower is better)
Translates to: ENQPLNALPQPH*LLWASQLLLYQ
Trigger: CTGGTACAGCAAAAGCTGACTGGCCCAAAGGAGGCAATGAGGCTGTGGCAGTGCATTTAATGGCTGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CCA 72 bp AAGCTATGTCCTCCTGAGGTGAGGACGGCTGGAACCTaGATGGGAACATGCTTCAAAGAGTTACTGAACCGT +
Preference number: 6 (lower is better)
Translates to: KLCPPEVRTAGT*MGTCFKELLNR
Trigger: ACGGTTCAGTAACTCTTTGAAGCATGTTCCCATCCAGGTTCCAGCCGTCCTCACCTCAGGAGGACATAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CAA 72 bp GCCATTAAATGCACTGCCACAGCCTCATTGCCTCCTTaGGGCCAGTCAGCTTTTGCTGTACCAGCTGTCAAA +
Preference number: 6 (lower is better)
Translates to: AIKCTATASLPP*GQSAFAVPAVK
Trigger: TTTGACAGCTGGTACAGCAAAAGCTGACTGGCCCAAAGGAGGCAATGAGGCTGTGGCAGTGCATTTAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CAA 90 bp TCAGACAGAAAAAGAAATTGCAAGATGGAAGCTATGCTGCTGGCCTaGAAGATGAAGGAGCACCTGCTGCCATGGCTTCGTAGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: SDRKRNCKMEAMLLA*KMKEHLLPWLRSSA
Trigger: GGCAGAGCTACGAAGCCATGGCAGCAGGTGCTCCTTCATCTTCAAGGCCAGCAGCATAGCTTCCATCTTGCAATTTCTTTTTCTGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS TCA 72 bp GGAATGCAACTGTTTGTCTCTTATCTACCTATGACCTaGAAGGCAGGGCCCTTGCTTCGAGTTGTCCCACCT +
Preference number: 6 (lower is better)
Translates to: GMQLFVSYLPMT*KAGPLLRVVPP
Trigger: AGGTGGGACAACTCGAAGCAAGGGCCCTGCCTTTCAGGTCATAGGTAGATAAGAGACAAACAGTTGCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS GCA 72 bp CTTAGATTCCCCAATCAAGTGATACCAAAGGGTCACTaGTGGTGGTCCTTCCTGGCTCTGGAGTTGACCAAA +
Preference number: 6 (lower is better)
Translates to: LRFPNQVIPKGH*WWSFLALELTK
Trigger: TTTGGTCAACTCCAGAGCCAGGAAGGACCACCAGCAGTGACCCTTTGGTATCACTTGATTGGGGAATCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS GCA 72 bp AGGAAGAACACAGGCTATGCATATGCATGTCTAGCCTaGCATTTCCCCACTTTGCCCGGGAACACATTAGGT +
Preference number: 6 (lower is better)
Translates to: RKNTGYAYACLA*HFPTLPGNTLG
Trigger: ACCTAATGTGTTCCCGGGCAAAGTGGGGAAATGGCAGGCTAGACATGCATATGCATAGCCTGTGTTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CCA 72 bp TCTGATGGTTCTGTACAGGGACTCTCATTCTCCCTGTaGCCATGTAAGACGTGTCTTTCACCTTCCATCACG +
Preference number: 6 (lower is better)
Translates to: SDGSVQGLSFSL*PCKTCLSPSIT
Trigger: CGTGATGGAAGGTGAAAGACACGTCTTACATGGCCACAGGGAGAATGAGAGTCCCTGTACAGAACCATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504904.8
ENST00000589652.1
ENST00000591790.5
CDS CCA 72 bp CCATTAAATGCACTGCCACAGCCTCATTGCCTCCTTTaGGCCAGTCAGCTTTTGCTGTACCAGCTGTCAAAT +
Preference number: 6 (lower is better)
Translates to: PLNALPQPHCLL*ASQLLLYQLSN
Trigger: ATTTGACAGCTGGTACAGCAAAAGCTGACTGGCCCAAAGGAGGCAATGAGGCTGTGGCAGTGCATTTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CAA 72 bp TATGCATATGCATGTCTAGCCTGCCATTTCCCCACTTaGCCCGGGAACACATTAGGTTACCTCACTTGCAGG +
Preference number: 6 (lower is better)
Translates to: YAYACLACHFPT*PGNTLGYLTCR
Trigger: CCTGCAAGTGAGGTAACCTAATGTGTTCCCGGGCAAAGTGGGGAAATGGCAGGCTAGACATGCATATGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS TCA 72 bp TCACAGGTGTGTGCACTCAGCCACGCACCCCAAATTTaGGAAGATGATTCTTGTCTGATATGGTCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: SQVCALSHAPQI*EDDSCLIWSGC
Trigger: ACAGCCAGACCATATCAGACAAGAATCATCTTCTCAAATTTGGGGTGCGTGGCTGAGTGCACACACCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504904.8
ENST00000589652.1
ENST00000591790.5
CDS CCA 72 bp AAATGTGTAGAAATACAAGGTATGTGTGAGGTGGTGTaGAGCTTCCATGCCTTCCTTGGGAACCCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: KCVEIQGMCEVV*SFHAFLGNPPG
Trigger: TCCTGGAGGGTTCCCAAGGAAGGCATGGAAGCTCCACACCACCTCACACATACCTTGTATTTCTACACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CAA 72 bp AAAAGAAATTGCAAGATGGAAGCTATGCTGCTGGCCTaGAAGATGAAGGAGCACCTGCTGCCATGGCTTCGT +
Preference number: 6 (lower is better)
Translates to: KRNCKMEAMLLA*KMKEHLLPWLR
Trigger: ACGAAGCCATGGCAGCAGGTGCTCCTTCATCTTCAAGGCCAGCAGCATAGCTTCCATCTTGCAATTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS TCA 72 bp TTGAAGGAATGCAACTGTTTGTCTCTTATCTACCTATaGCCTGAAAGGCAGGGCCCTTGCTTCGAGTTGTCC +
Preference number: 6 (lower is better)
Translates to: LKECNCLSLIYL*PERQGPCFELS
Trigger: GGACAACTCGAAGCAAGGGCCCTGCCTTTCAGGTCATAGGTAGATAAGAGACAAACAGTTGCATTCCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS GCA 72 bp ATGGGAGACCTGGATGTTGACTCCAAAAAGAACACCTaGCAAACACCCTGTAATCCCTTTACCCTGCTTTAC +
Preference number: 6 (lower is better)
Translates to: MGDLDVDSKKNT*QTPCNPFTLLY
Trigger: GTAAAGCAGGGTAAAGGGATTACAGGGTGTTTGGCAGGTGTTCTTTTTGGAGTCAACATCCAGGTCTCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CAA 72 bp CCACAGCCTCATTGCCTCCTTTGGGCCAGTCAGCTTTaGCTGTACCAGCTGTCAAATATTCAAAAATCACTC +
Preference number: 6 (lower is better)
Translates to: PQPHCLLWASQL*LYQLSNIQKSL
Trigger: GAGTGATTTTTGAATATTTGACAGCTGGTACAGCAAAAGCTGACTGGCCCAAAGGAGGCAATGAGGCTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS TCA 72 bp CTCTACCCTCCTGTCACATGTAAACTGTGTGTTCAGTaGAAGGCTCATCAGAGACTTGAAGGAATGCAACTG +
Preference number: 6 (lower is better)
Translates to: LYPPVTCKLCVQ*KAHQRLEGMQL
Trigger: CAGTTGCATTCCTTCAAGTCTCTGATGAGCCTTTCACTGAACACACAGTTTACATGTGACAGGAGGGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CAA 72 bp GGCTTCATTACACAGGCAAGATTAAACTACTGGCCCTaGGTGATCAACTTAACCTTTAGTCTTTCTCCCCTC +
Preference number: 6 (lower is better)
Translates to: GFITQARLNYWP*VINLTFSLSPL
Trigger: GAGGGGAGAAAGACTAAAGGTTAAGTTGATCACCAAGGGCCAGTAGTTTAATCTTGCCTGTGTAATGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS TCA 72 bp TTCAGCTATCCAGAAGCTCTTCAAACCCTGTCCTTCTaGGTTTTTATGGTGGCTTCATTACACAGGCAAGAT +
Preference number: 6 (lower is better)
Translates to: FSYPEALQTLSF*VFMVASLHRQD
Trigger: ATCTTGCCTGTGTAATGAAGCCACCATAAAAACTCAGAAGGACAGGGTTTGAAGAGCTTCTGGATAGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CCA 72 bp GTAGCTCTGCCTTTCAGGACAGATAAGCAGATCAGTTaGCTTTCCCCTTCCAATTACTTAGGTAAAATGACT +
Preference number: 6 (lower is better)
Translates to: VALPFRTDKQIS*LSPSNYLGKMT
Trigger: AGTCATTTTACCTAAGTAATTGGAAGGGGAAAGCCAACTGATCTGCTTATCTGTCCTGAAAGGCAGAGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CCA 72 bp AAGCTCTTCAAACCCTGTCCTTCTGAGTTTTTATGGTaGCTTCATTACACAGGCAAGATTAAACTACTGGCC +
Preference number: 6 (lower is better)
Translates to: KLFKPCPSEFLW*LHYTGKIKLLA
Trigger: GGCCAGTAGTTTAATCTTGCCTGTGTAATGAAGCCACCATAAAAACTCAGAAGGACAGGGTTTGAAGAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS TCA 72 bp AACCACATACCAAGCATCCAAGAGACCAACGAAGACTaGGACCCACTAAAAAGGCTGAGATTAGAATTCTTA +
Preference number: 6 (lower is better)
Translates to: NHIPSIQETNED*DPLKRLRLEFL
Trigger: TAAGAATTCTAATCTCAGCCTTTTTAGTGGGTCTCAGTCTTCGTTGGTCTCTTGGATGCTTGGTATGTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS TCA 72 bp CTGGATTCAAAGCTTGCCTCTGCCAATTACTGGCTGTaGAAAAGTTACACAAAGCCTGTTTGCTCATCTATA +
Preference number: 6 (lower is better)
Translates to: LDSKLASANYWL*KSYTKPVCSSI
Trigger: TATAGATGAGCAAACAGGCTTTGTGTAACTTTTTCACAGCCAGTAATTGGCAGAGGCAAGCTTTGAATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS GCA 72 bp AGAACACCTGCCAAACACCCTGTAATCCCTTTACCCTaGTTTACTTTTCAAAGTACCTATCAGCACCTATTA +
Preference number: 6 (lower is better)
Translates to: RTPAKHPVIPLP*FTFQSTYQHLL
Trigger: TAATAGGTGCTGATAGGTACTTTGAAAAGTAAAGCAGGGTAAAGGGATTACAGGGTGTTTGGCAGGTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CCA 72 bp CAGAAGCTCTTCAAACCCTGTCCTTCTGAGTTTTTATaGTGGCTTCATTACACAGGCAAGATTAAACTACTG +
Preference number: 6 (lower is better)
Translates to: QKLFKPCPSEFL*WLHYTGKIKLL
Trigger: CAGTAGTTTAATCTTGCCTGTGTAATGAAGCCACCATAAAAACTCAGAAGGACAGGGTTTGAAGAGCTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CCA 72 bp CTTTCTGGACCAAACCAACGTACATCTCACACATACTaGCTGATGTCTCATGTCTCCCAAAAACATATAAAA +
Preference number: 6 (lower is better)
Translates to: LSGPNQRTSHTY*LMSHVSQKHIK
Trigger: TTTTATATGTTTTTGGGAGACATGAGACATCAGCCAGTATGTGTGAGATGTACGTTGGTTTGGTCCAGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS CCA 72 bp GCTGTTAGGATATTTACATGTGATGTCTTCGGTAACTaGAACATGGTCATTGCTTGCCTTCCTTTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: AVRIFTCDVFGN*NMVIACLPFPF
Trigger: AAAAGGAAAAGGAAGGCAAGCAATGACCATGTTCCAGTTACCGAAGACATCACATGTAAATATCCTAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591790.5
CDS CAA 72 bp GTAAACTGTGTGTTCAGTGAAAGGCTCATCAGAGACTaGAAGGAATGCAACTGTTTGTCTCTTATCTACCTA +
Preference number: 6 (lower is better)
Translates to: VNCVFSERLIRD*KECNCLSLIYL
Trigger: TAGGTAGATAAGAGACAAACAGTTGCATTCCTTCAAGTCTCTGATGAGCCTTTCACTGAACACACAGTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589652.1
CDS GCA 72 bp CACACAAAATATGTGTTAATAGACTGTGTAGGTTATTaGTTAGGTGTCAGTAAGGTGACCAGTAGACTATTA +
Preference number: 6 (lower is better)
Translates to: HTKYVLIDCVGY*LGVSKVTSRLL
Trigger: TAATAGTCTACTGGTCACCTTACTGACACCTAAGCAATAACCTACACAGTCTATTAACACATATTTTGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591790.5