Pregenerated sensors for ZNF665 (Homo sapiens)
Ensembl gene IDs: ENSG00000197497Ensembl transcript IDs: ENST00000396424.5, ENST00000596373.1, ENST00000596564.1, ENST00000597544.5, ENST00000598440.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTCATGATCTCGCTCACTaGAACCTCCGCCTCCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPHDLAH*NLRLPG Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGCGAGATCATG...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTAGCCTCCCGAGTAGCTaGGATTACAGGCGTGCACCA | + |
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Preference number: 2 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPSLPSS*DYRRAP Trigger: TGGTGCACGCCTGTAATCCCAGCTACTCGGGAGGCT...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| 3UTR-3UTR GCA 90 bp | GTGAAAGAATTTGTGGCTGAAAAACTGGCCGCACTCCTTTGTAAGGTTACTTTTTTGCCCAGGCTGGAGTaGAATGGCATGATCTCGCTC | + |
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Preference number: 2 (lower is better) Translates to: VKEFVAEKLAALLCKVTFLPRLE*NGMISL Trigger: GAGCGAGATCATGCCATTGCACTCCAGCCTGGGCAA...AAAAGTAACCTTACAAAGGAGTGCGGCCAGTTTTTCAGCCACAAATTCTTTCAC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| 3UTR-3UTR CCA 90 bp | GTGAAAGAATTTGTGGCTGAAAAACTGGCCGCACTCCTTTGTAAGGTTACTTTTCAGGCTGGAGTGCAATaGCATGATCTCGCTCACTGC | + |
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Preference number: 2 (lower is better) Translates to: VKEFVAEKLAALLCKVTFQAGVQ*HDLAHC Trigger: GCAGTGAGCGAGATCATGCCATTGCACTCCAGCCTG...AAAAGTAACCTTACAAAGGAGTGCGGCCAGTTTTTCAGCCACAAATTCTTTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGACCTGGATAAAGCTTCTGTCATACATAGTATATTCACAGGATTTGAACTTGTGGCTGAAAAACTaGCCGCACTCCTTTGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: SETWIKLLSYIVYSQDLNLWLKN*PHSFVR Trigger: CCTTACAAAGGAGTGCGGCCAGTTTTTCAGCCACAA...GTTCAAATCCTGTGAATATACTATGTATGACAGAAGCTTTATCCAGGTCTCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| 3UTR GCA 72 bp | GCCCGGCCAGTAGAGAATTTCTTCCCATACCCACAGTaGTCTTCTGTCAGAAGAAGGGCACCTGCAGTGCAA | + |
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Preference number: 3 (lower is better) Translates to: ARPVENFFPYPQ*SSVRRRAPAVQ Trigger: TTGCACTGCAGGTGCCCTTCTTCTGACAGAAGAGCACTGTGGGTATGGGAAGAAATTCTCTACTGGCCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| 3UTR-3UTR CAA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTGAGCCCTTCCATCCTTaGATTCTTTCCCGAACAACA | + |
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Preference number: 3 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPEPFHP*ILSRTT Trigger: TGTTGTTCGGGAAAGAATCAAAGGATGGAAGGGCTC...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTCCCGAACAACACCATGTTAGGCGTATAATCATGTATAAAATCAGCACAAAACTCATCAGGAGTTaGCCACAGTCACTGTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: FFPEQHHVRRIIMYKISTKLIRS*PQSLYL Trigger: CAAATACAGTGACTGTGGCAAACTCCTGATGAGTTT...TGTGCTGATTTTATACATGATTATACGCCTAACATGGTGTTGTTCGGGAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTCCCGAACAACACCATGTTAGGCGTATAATCATGTATAAAATCAGCACAGCATGCATGTTACGTTaGTGTGACTTCATCAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: FFPEQHHVRRIIMYKISTACMLR*CDFIKD Trigger: ATCTTTGATGAAGTCACACAAACGTAACATGCATGC...TGTGCTGATTTTATACATGATTATACGCCTAACATGGTGTTGTTCGGGAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR TCA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTGAGGTTGCGGTGAGCTaGGATTGCATCACTGCACTC | + |
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Preference number: 4 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPEVAVS*DCITAL Trigger: GAGTGCAGTGATGCAATCTCAGCTCACCGCAACCTC...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR CCA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTCAGACTGGAGTGCAGTaGCATGATCTCGGCTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPQTGVQ*HDLGSP Trigger: TGGTGAGCCGAGATCATGCCACTGCACTCCAGTCTG...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR TCA 90 bp | GTGAAAGAATTTGTGGCTGAAAAACTGGCCGCACTCCTTTGTAAGGTTACTTTTAGGCGGAGGTTGCGGTaGGCTGAGATTGCATCACTG | + |
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Preference number: 4 (lower is better) Translates to: VKEFVAEKLAALLCKVTFRRRLR*AEIASL Trigger: CAGTGATGCAATCTCAGCTCACCGCAACCTCCGCCT...AAAAGTAACCTTACAAAGGAGTGCGGCCAGTTTTTCAGCCACAAATTCTTTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR TCA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTAGCTACTTGGGAGGCTaGGGCAGGAGAATCGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPSYLGG*GRRIAK Trigger: TTTAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCT...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR TCA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTCCTCACCTAATGAAGTaGGTGAGCCCTTCCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPPHLMK*VSPSIL Trigger: AAGGATGGAAGGGCTCACTCACTTCATTAGGTGAGG...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR TCA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTAGCCCTTCCATCCTTTaGTTCTTTCCCGAACAACAC | + |
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Preference number: 4 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPSPSIL*FFPEQH Trigger: GTGTTGTTCGGGAAAGAATCAAAGGATGGAAGGGCT...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR GCA 90 bp | TCTGAGACCTGGATAAAGCTTCTGTCATACATAGTATATTCACAGGATTTGAACCATGATCTCGCTCACTaGAACCTCCGCCTCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SETWIKLLSYIVYSQDLNHDLAH*NLRLPG Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGCGAGATCATG...GTTCAAATCCTGTGAATATACTATGTATGACAGAAGCTTTATCCAGGTCTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR GCA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTTTCCCATACCCACAGTaGTCTTCTGTCAGAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPFPYPQ*SSVRRR Trigger: CCTTCTTCTGACAGAAGAGCACTGTGGGTATGGGAA...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTCCCGAACAACACCATGTTAGGCGTATAATCATGTATAAAATCAGCACACCAGGAGGCGGAGGTTaGGGTGAGCTGAGATTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FFPEQHHVRRIIMYKISTPGGGG*GELRLH Trigger: ATGCAATCTCAGCTCACCGCAACCTCCGCCTCCTGG...TGTGCTGATTTTATACATGATTATACGCCTAACATGGTGTTGTTCGGGAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| 3UTR CAA 72 bp | GTAAATCCTAGTAACAAACATGGGATTCTGGTTACTTaGATTAAACTTCTTATGCTCGGCCGGCCGGGCACG | + |
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Preference number: 4 (lower is better) Translates to: VNPSNKHGILVT*IKLLMLGRPGT Trigger: CGTGCCCGGCCGGCCGAGCATAAGAAGTTTAATCAAAGTAACCAGAATCCCATGTTTGTTACTAGGATTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR TCA 90 bp | TCTGAGACCTGGATAAAGCTTCTGTCATACATAGTATATTCACAGGATTTGAACAAGGTGGGCGGATTATaGGGTCAGGAGTTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: SETWIKLLSYIVYSQDLNKVGGL*GQEFET Trigger: GGTCTCGAACTCCTGACCTCATAATCCGCCCACCTT...GTTCAAATCCTGTGAATATACTATGTATGACAGAAGCTTTATCCAGGTCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTCCCGAACAACACCATGTTAGGCGTATAATCATGTATAAAATCAGCACATTGCCCAGGCTGGAGTaGAATGGCATGATCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FFPEQHHVRRIIMYKISTLPRLE*NGMISL Trigger: GAGCGAGATCATGCCATTGCACTCCAGCCTGGGCAA...TGTGCTGATTTTATACATGATTATACGCCTAACATGGTGTTGTTCGGGAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTCCCGAACAACACCATGTTAGGCGTATAATCATGTATAAAATCAGCACAAGGCGTGAGCCACTGTaGCCGGCCAGTAGAGAATTT | + |
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Preference number: 4 (lower is better) Translates to: FFPEQHHVRRIIMYKISTRREPL*PASREF Trigger: AAATTCTCTACTGGCCGGGCACAGTGGCTCACGCCT...TGTGCTGATTTTATACATGATTATACGCCTAACATGGTGTTGTTCGGGAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR GCA 90 bp | TCTGAGACCTGGATAAAGCTTCTGTCATACATAGTATATTCACAGGATTTGAACTTGCCCAGACTGGAGTaGAGTGGCATGATCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SETWIKLLSYIVYSQDLNLPRLE*SGMISA Trigger: AGCCGAGATCATGCCACTGCACTCCAGTCTGGGCAA...GTTCAAATCCTGTGAATATACTATGTATGACAGAAGCTTTATCCAGGTCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR CCA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTGTATGGACTGCCATATaGGTAGTTAGGGTTGAACGA | + |
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Preference number: 4 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPVWTAI*VVRVER Trigger: TCGTTCAACCCTAACTACCCATATGGCAGTCCATAC...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR CCA 90 bp | TCTGAGACCTGGATAAAGCTTCTGTCATACATAGTATATTCACAGGATTTGAACCAGGCTGGAGTGCAATaGCATGATCTCGCTCACTGC | + |
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Preference number: 4 (lower is better) Translates to: SETWIKLLSYIVYSQDLNQAGVQ*HDLAHC Trigger: GCAGTGAGCGAGATCATGCCATTGCACTCCAGCCTG...GTTCAAATCCTGTGAATATACTATGTATGACAGAAGCTTTATCCAGGTCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR CCA 90 bp | TCTGAGACCTGGATAAAGCTTCTGTCATACATAGTATATTCACAGGATTTGAACTTTGGCAGGCCAAGGTaGGCGGATTATGAGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SETWIKLLSYIVYSQDLNFGRPR*ADYEVR Trigger: CCTGACCTCATAATCCGCCCACCTTGGCCTGCCAAA...GTTCAAATCCTGTGAATATACTATGTATGACAGAAGCTTTATCCAGGTCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR TCA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTTCATCATCTTTCCACTaGCACTCAAAGTCGTATGTA | + |
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Preference number: 4 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPSSSFH*HSKSYV Trigger: TACATACGACTTTGAGTGTCAGTGGAAAGATGATGA...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR TCA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTCCGGTATGGATGATCTaGTGCTTAGTTAAGTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPPVWMI*CLVKFE Trigger: TTCAAACTTAACTAAGCATCAGATCATCCATACCGG...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR GCA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTGTAATAGTCTCAGCATaGATGTTACGTTTGTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPVIVSA*MLRLCD Trigger: GTCACACAAACGTAACATGCATGCTGAGACTATTAC...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR TCA 90 bp | GTGAAAGAATTTGTGGCTGAAAAACTGGCCGCACTCCTTTGTAAGGTTACTTTTGCTAAGTGTGAATACTaGGTGAAAACCTTGACGCAT | + |
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Preference number: 4 (lower is better) Translates to: VKEFVAEKLAALLCKVTFAKCEY*VKTLTH Trigger: ATGCGTCAAGGTTTTCACTCAGTATTCACACTTAGC...AAAAGTAACCTTACAAAGGAGTGCGGCCAGTTTTTCAGCCACAAATTCTTTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR TCA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTGGATTCTGGTTACTTTaGTTAAACTTCTTATGCTCG | + |
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Preference number: 4 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPGFWLL*LNFLCS Trigger: CGAGCATAAGAAGTTTAATCAAAGTAACCAGAATCC...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR CCA 90 bp | TTCTTTCCCGAACAACACCATGTTAGGCGTATAATCATGTATAAAATCAGCACATTGTGGCTGAAAAACTaGCCGCACTCCTTTGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: FFPEQHHVRRIIMYKISTLWLKN*PHSFVR Trigger: CCTTACAAAGGAGTGCGGCCAGTTTTTCAGCCACAA...TGTGCTGATTTTATACATGATTATACGCCTAACATGGTGTTGTTCGGGAAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTCCCGAACAACACCATGTTAGGCGTATAATCATGTATAAAATCAGCACAAATATGCCTGTTTCCTaGAGCCCTTCTATCACGTTG | + |
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Preference number: 4 (lower is better) Translates to: FFPEQHHVRRIIMYKISTNMPVS*SPSITL Trigger: CAACGTGATAGAAGGGCTGCAGGAAACAGGCATATT...TGTGCTGATTTTATACATGATTATACGCCTAACATGGTGTTGTTCGGGAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR CCA 90 bp | TTCTTTCCCGAACAACACCATGTTAGGCGTATAATCATGTATAAAATCAGCACAATCCGAGTGTCTTCCTaGCTCTATTTCATGGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: FFPEQHHVRRIIMYKISTIRVSS*LYFMVY Trigger: GTAGACCATGAAATAGAGCCAGGAAGACACTCGGAT...TGTGCTGATTTTATACATGATTATACGCCTAACATGGTGTTGTTCGGGAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR CCA 90 bp | TCTGAGACCTGGATAAAGCTTCTGTCATACATAGTATATTCACAGGATTTGAACATTGTTCTTCCCCTTTaGTGGCAAATCCGTGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: SETWIKLLSYIVYSQDLNIVLPL*WQIRVY Trigger: GTAAACACGGATTTGCCACCAAAGGGGAAGAACAAT...GTTCAAATCCTGTGAATATACTATGTATGACAGAAGCTTTATCCAGGTCTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR TCA 90 bp | TCTGAGACCTGGATAAAGCTTCTGTCATACATAGTATATTCACAGGATTTGAACCAAAGATGTATCTTTTaGTGCGTATTGAGCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SETWIKLLSYIVYSQDLNQRCIF*CVLSSE Trigger: CTCAGAGCTCAATACGCATCAAAAGATACATCTTTG...GTTCAAATCCTGTGAATATACTATGTATGACAGAAGCTTTATCCAGGTCTCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR TCA 90 bp | TTCTTTCCCGAACAACACCATGTTAGGCGTATAATCATGTATAAAATCAGCACAAAGCTTACTCCAAGCTaGTTTTCAATATGCCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: FFPEQHHVRRIIMYKISTKLTPS*FSICLF Trigger: AAACAGGCATATTGAAAATCAGCTTGGAGTAAGCTT...TGTGCTGATTTTATACATGATTATACGCCTAACATGGTGTTGTTCGGGAAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR TCA 90 bp | TCTGAGACCTGGATAAAGCTTCTGTCATACATAGTATATTCACAGGATTTGAACAATAAGGATGATGAGTaGCATCATAGTTCATCATCC | + |
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Preference number: 4 (lower is better) Translates to: SETWIKLLSYIVYSQDLNNKDDE*HHSSSS Trigger: GGATGATGAACTATGATGTCACTCATCATCCTTATT...GTTCAAATCCTGTGAATATACTATGTATGACAGAAGCTTTATCCAGGTCTCAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR GCA 90 bp | TCTGAGACCTGGATAAAGCTTCTGTCATACATAGTATATTCACAGGATTTGAACATAAAATCAGCACATTaGAAAGTTCTGGTTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: SETWIKLLSYIVYSQDLNIKSAH*KVLVGS Trigger: ACTTCCAACCAGAACTTTGCAATGTGCTGATTTTAT...GTTCAAATCCTGTGAATATACTATGTATGACAGAAGCTTTATCCAGGTCTCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS CCA 90 bp | GCTCAGGAACGGGGATCTGGGAATCGGGGATCTCGGTCTGGGAACTaGGATCTTAGTGGAGGATCCACGAGGCACGGCGATTGGATCCAG | + |
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Preference number: 5 (lower is better) Translates to: AQERGSGNRGSRSGN*DLSGGSTRHGDWIQ Trigger: CTGGATCCAATCGCCGTGCCTCGTGGATCCTCCACTAAGATCCCAGTTCCCAGACCGAGATCCCCGATTCCCAGATCCCCGTTCCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596564.1 |
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| CDS GCA 90 bp | GCAGACAGTGTTGGAACTGAACTGGAGGACAGCCAGTTGGTTGCTTaGTGTTTGTTGGTGGGGAGAAACCCCTCGCATTTGGCCACAGAA | + |
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Preference number: 5 (lower is better) Translates to: ADSVGTELEDSQLVA*CLLVGRNPSHLATE Trigger: TTCTGTGGCCAAATGCGAGGGGTTTCTCCCCACCAACAAACAGCAAGCAACCAACTGGCTGTCCTCCAGTTCAGTTCCAACACTGTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CCA 90 bp | TTGGAACTGAACTGGAGGACAGCCAGTTGGTTGCTTGCTGTTTGTTaGTGGGGAGAAACCCCTCGCATTTGGCCACAGAAGTCTTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LELNWRTASWLLAVC*WGETPRIWPQKSSV Trigger: CACAGAAGACTTCTGTGGCCAAATGCGAGGGGTTTCTCCCCACCAACAAACAGCAAGCAACCAACTGGCTGTCCTCCAGTTCAGTTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS TCA 90 bp | GGCCTGGACATGCAACTGGGAACTGAGCCATCAATCTGTGAGATCTaGCACTATCTTCATGCAGACAGTGTTGGAACTGAACTGGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: GLDMQLGTEPSICEI*HYLHADSVGTELED Trigger: GTCCTCCAGTTCAGTTCCAACACTGTCTGCATGAAGATAGTGTCAGATCTCACAGATTGATGGCTCAGTTCCCAGTTGCATGTCCAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS GCA 90 bp | GACATCTGCTCCCAGAGGCCTTACCCTGGCATGATGCAGTGTCACTaGAAGAAAAACACCAATTTCCCATTTCTCCTGGGAGAGGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: DICSQRPYPGMMQCH*KKNTNFPFLLGEEK Trigger: CTTTTCCTCTCCCAGGAGAAATGGGAAATTGGTGTTTTTCTTGCAGTGACACTGCATCATGCCAGGGTAAGGCCTCTGGGAGCAGATGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000598440.1 |
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| CDS CCA 90 bp | TGGGAACTTCAACTTGAAGTTGGTCGGTCAGAAGTTTCAGAGGCCTaGACATGCAACTGGGAACTGAGCCATCAATCTGTGAGATCTGAC | + |
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Preference number: 5 (lower is better) Translates to: WELQLEVGRSEVSEA*TCNWELSHQSVRSD Trigger: GTCAGATCTCACAGATTGATGGCTCAGTTCCCAGTTGCATGTCCAGGCCTCTGAAACTTCTGACCGACCAACTTCAAGTTGAAGTTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS TCA 90 bp | CTCACCAAGGCTCCAGCTAAAGCCCACTTCAGAGCATGCCTGAGCTaGGACCAAGAAAAAGGTAAAGTAGGAGCTGGATCTGTTAAAACT | + |
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Preference number: 5 (lower is better) Translates to: LTKAPAKAHFRACLS*DQEKGKVGAGSVKT Trigger: AGTTTTAACAGATCCAGCTCCTACTTTACCTTTTTCTTGGTCTCAGCTCAGGCATGCTCTGAAGTGGGCTTTAGCTGGAGCCTTGGTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000598440.1 |
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| CDS GCA 90 bp | CTTCAACTTGAAGTTGGTCGGTCAGAAGTTTCAGAGGCCTGGACATaGAACTGGGAACTGAGCCATCAATCTGTGAGATCTGACACTATC | + |
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Preference number: 5 (lower is better) Translates to: LQLEVGRSEVSEAWT*NWELSHQSVRSDTI Trigger: GATAGTGTCAGATCTCACAGATTGATGGCTCAGTTCCCAGTTGCATGTCCAGGCCTCTGAAACTTCTGACCGACCAACTTCAAGTTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CCA 90 bp | CTTGAAGTTGGTCGGTCAGAAGTTTCAGAGGCCTGGACATGCAACTaGGAACTGAGCCATCAATCTGTGAGATCTGACACTATCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: LEVGRSEVSEAWTCN*ELSHQSVRSDTIFM Trigger: CATGAAGATAGTGTCAGATCTCACAGATTGATGGCTCAGTTCCCAGTTGCATGTCCAGGCCTCTGAAACTTCTGACCGACCAACTTCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS-3UTR CAA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTTATTGTTCTTCCCCTTaGGTGGCAAATCCGTGTTTA | + |
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Preference number: 5 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPYCSSP*VANPCL Trigger: TAAACACGGATTTGCCACCAAAGGGGAAGAACAATA...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS GCA 90 bp | ACAAAGCTTTCCCCACAGTCGTCTCATTTTACAGCATTTCGTGGGTaGTTGTACACACTAACATCTGACTTCATAACCAGCTTCTCTTAT | + |
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Preference number: 5 (lower is better) Translates to: TKLSPQSSHFTAFRG*LYTLTSDFITSFSY Trigger: ATAAGAGAAGCTGGTTATGAAGTCAGATGTTAGTGTGTACAAGCACCCACGAAATGCTGTAAAATGAGACGACTGTGGGGAAAGCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598440.1 |
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| CDS-3UTR CAA 90 bp | AAGGGCACCTGCAGTGCAATAAGGATGATGAGTGACATCATAGTTCATCATCCTACTTTTCTGCATTATTaGTACCACACATCAGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: KGTCSAIRMMSDIIVHHPTFLHY*YHTSVP Trigger: AGGGACTGATGTGTGGTACAAATAATGCAGAAAAGT...AGGATGATGAACTATGATGTCACTCATCATCCTTATTGCACTGCAGGTGCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR CAA 90 bp | GTGAAAGAATTTGTGGCTGAAAAACTGGCCGCACTCCTTTGTAAGGTTACTTTTGCATGCATGTTACGTTaGTGTGACTTCATCAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: VKEFVAEKLAALLCKVTFACMLR*CDFIKD Trigger: ATCTTTGATGAAGTCACACAAACGTAACATGCATGC...AAAAGTAACCTTACAAAGGAGTGCGGCCAGTTTTTCAGCCACAAATTCTTTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR CAA 90 bp | TCTGAGACCTGGATAAAGCTTCTGTCATACATAGTATATTCACAGGATTTGAACAATCCTCACCTACAGTaGTGGTCCAGGAGTAATAGT | + |
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Preference number: 5 (lower is better) Translates to: SETWIKLLSYIVYSQDLNNPHLQ*WSRSNS Trigger: ACTATTACTCCTGGACCACAACTGTAGGTGAGGATT...GTTCAAATCCTGTGAATATACTATGTATGACAGAAGCTTTATCCAGGTCTCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS TCA 90 bp | CACGGAGACACAAATGTAGTAGCAATATATGAACCAATTGCTTTGTaGGAAACCCAGTGGTCATTTAAGAGGTTGGAACTCTTAACAGAA | + |
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Preference number: 5 (lower is better) Translates to: HGDTNVVAIYEPIAL*ETQWSFKRLELLTE Trigger: TTCTGTTAAGAGTTCCAACCTCTTAAATGACCACTGGGTTTCTCACAAAGCAATTGGTTCATATATTGCTACTACATTTGTGTCTCCGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598440.1 |
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| CDS-3UTR CAA 90 bp | TTCTTTCCCGAACAACACCATGTTAGGCGTATAATCATGTATAAAATCAGCACATATAAAATCAGCACATaGCAAAGTTCTGGTTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: FFPEQHHVRRIIMYKISTYKIST*QSSGWK Trigger: CTTCCAACCAGAACTTTGCAATGTGCTGATTTTATA...TGTGCTGATTTTATACATGATTATACGCCTAACATGGTGTTGTTCGGGAAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS-3UTR CAA 90 bp | TCTGAGACCTGGATAAAGCTTCTGTCATACATAGTATATTCACAGGATTTGAACGGGATTCTGGTTACTTaGATTAAACTTCTTATGCTC | + |
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Preference number: 5 (lower is better) Translates to: SETWIKLLSYIVYSQDLNGILVT*IKLLML Trigger: GAGCATAAGAAGTTTAATCAAAGTAACCAGAATCCC...GTTCAAATCCTGTGAATATACTATGTATGACAGAAGCTTTATCCAGGTCTCAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396424.5 |
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| CDS CCA 72 bp | CGGGGATCTGGGAATCGGGGATCTCGGTCTGGGAACTaGGATCTTAGTGGAGGATCCACGAGGCACGGCGAT | + |
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Preference number: 6 (lower is better) Translates to: RGSGNRGSRSGN*DLSGGSTRHGD Trigger: ATCGCCGTGCCTCGTGGATCCTCCACTAAGATCCCAGTTCCCAGACCGAGATCCCCGATTCCCAGATCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596564.1 |
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| CDS CCA 72 bp | TGGAGGACAGCCAGTTGGTTGCTTGCTGTTTGTTGGTaGGGAGAAACCCCTCGCATTTGGCCACAGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: WRTASWLLAVCW*GETPRIWPQKS Trigger: AGACTTCTGTGGCCAAATGCGAGGGGTTTCTCCCCACCAACAAACAGCAAGCAACCAACTGGCTGTCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CAA 72 bp | GAACTGGAGGACAGCCAGTTGGTTGCTTGCTGTTTGTaGGTGGGGAGAAACCCCTCGCATTTGGCCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: ELEDSQLVACCL*VGRNPSHLATE Trigger: TTCTGTGGCCAAATGCGAGGGGTTTCTCCCCACCAACAAACAGCAAGCAACCAACTGGCTGTCCTCCAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CAA 72 bp | ACTGAACTGGAGGACAGCCAGTTGGTTGCTTGCTGTTaGTTGGTGGGGAGAAACCCCTCGCATTTGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: TELEDSQLVACC*LVGRNPSHLAT Trigger: TGTGGCCAAATGCGAGGGGTTTCTCCCCACCAACAAACAGCAAGCAACCAACTGGCTGTCCTCCAGTTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CAA 72 bp | ACAGTGTTGGAACTGAACTGGAGGACAGCCAGTTGGTaGCTTGCTGTTTGTTGGTGGGGAGAAACCCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: TVLELNWRTASW*LAVCWWGETPR Trigger: GCGAGGGGTTTCTCCCCACCAACAAACAGCAAGCAACCAACTGGCTGTCCTCCAGTTCAGTTCCAACACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CAA 72 bp | GCAGACAGTGTTGGAACTGAACTGGAGGACAGCCAGTaGGTTGCTTGCTGTTTGTTGGTGGGGAGAAACCCC | + |
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Preference number: 6 (lower is better) Translates to: ADSVGTELEDSQ*VACCLLVGRNP Trigger: GGGGTTTCTCCCCACCAACAAACAGCAAGCAACCAACTGGCTGTCCTCCAGTTCAGTTCCAACACTGTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CAA 90 bp | AGTGTTGGAACTGAACTGGAGGACAGCCAGTTGGTTGCTTGCTGTTaGTTGGTGGGGAGAAACCCCTCGCATTTGGCCACAGAAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SVGTELEDSQLVACC*LVGRNPSHLATEVF Trigger: GAAGACTTCTGTGGCCAAATGCGAGGGGTTTCTCCCCACCAACAAACAGCAAGCAACCAACTGGCTGTCCTCCAGTTCAGTTCCAACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CCA 72 bp | CTTGCTGTTTGTTGGTGGGGAGAAACCCCTCGCATTTaGCCACAGAAGTCTTCTGTGTGGATTGTGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: LAVCWWGETPRI*PQKSSVWIVVL Trigger: CAACACCACAATCCACACAGAAGACTTCTGTGGCCAAATGCGAGGGGTTTCTCCCCACCAACAAACAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CCA 72 bp | GGTCGGTCAGAAGTTTCAGAGGCCTGGACATGCAACTaGGAACTGAGCCATCAATCTGTGAGATCTGACACT | + |
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Preference number: 6 (lower is better) Translates to: GRSEVSEAWTCN*ELSHQSVRSDT Trigger: AGTGTCAGATCTCACAGATTGATGGCTCAGTTCCCAGTTGCATGTCCAGGCCTCTGAAACTTCTGACCGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CAA 72 bp | CCCCTCGCATTTGGCCACAGAAGTCTTCTGTGTGGATaGTGGTGTTGGTGTGAGAGCAGAGGAAAACATGGT | + |
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Preference number: 6 (lower is better) Translates to: PLAFGHRSLLCG*WCWCESRGKHG Trigger: ACCATGTTTTCCTCTGCTCTCACACCAACACCACAATCCACACAGAAGACTTCTGTGGCCAAATGCGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CAA 72 bp | GCTTGCTGTTTGTTGGTGGGGAGAAACCCCTCGCATTaGGCCACAGAAGTCTTCTGTGTGGATTGTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: ACCLLVGRNPSH*ATEVFCVDCGV Trigger: AACACCACAATCCACACAGAAGACTTCTGTGGCCAAATGCGAGGGGTTTCTCCCCACCAACAAACAGCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CAA 90 bp | TATCTTCATGCAGACAGTGTTGGAACTGAACTGGAGGACAGCCAGTaGGTTGCTTGCTGTTTGTTGGTGGGGAGAAACCCCTCGCATTTG | + |
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Preference number: 6 (lower is better) Translates to: YLHADSVGTELEDSQ*VACCLLVGRNPSHL Trigger: CAAATGCGAGGGGTTTCTCCCCACCAACAAACAGCAAGCAACCAACTGGCTGTCCTCCAGTTCAGTTCCAACACTGTCTGCATGAAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS GCA 72 bp | GAAGTTGGTCGGTCAGAAGTTTCAGAGGCCTGGACATaGAACTGGGAACTGAGCCATCAATCTGTGAGATCT | + |
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Preference number: 6 (lower is better) Translates to: EVGRSEVSEAWT*NWELSHQSVRS Trigger: AGATCTCACAGATTGATGGCTCAGTTCCCAGTTGCATGTCCAGGCCTCTGAAACTTCTGACCGACCAACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CCA 72 bp | CAACTTGAAGTTGGTCGGTCAGAAGTTTCAGAGGCCTaGACATGCAACTGGGAACTGAGCCATCAATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: QLEVGRSEVSEA*TCNWELSHQSV Trigger: CACAGATTGATGGCTCAGTTCCCAGTTGCATGTCCAGGCCTCTGAAACTTCTGACCGACCAACTTCAAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CAA 90 bp | AGCCATCAATCTGTGAGATCTGACACTATCTTCATGCAGACAGTGTaGGAACTGAACTGGAGGACAGCCAGTTGGTTGCTTGCTGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: SHQSVRSDTIFMQTV*ELNWRTASWLLAVC Trigger: ACAAACAGCAAGCAACCAACTGGCTGTCCTCCAGTTCAGTTCCAACACTGTCTGCATGAAGATAGTGTCAGATCTCACAGATTGATGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS TCA 72 bp | GATCTGACACTATCTTCATGCAGACAGTGTTGGAACTaGACTGGAGGACAGCCAGTTGGTTGCTTGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: DLTLSSCRQCWN*TGGQPVGCLLF Trigger: AAACAGCAAGCAACCAACTGGCTGTCCTCCAGTTCAGTTCCAACACTGTCTGCATGAAGATAGTGTCAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CCA 72 bp | CTCGCATTTGGCCACAGAAGTCTTCTGTGTGGATTGTaGTGTTGGTGTGAGAGCAGAGGAAAACATGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LAFGHRSLLCGL*CWCESRGKHGF Trigger: AAAACCATGTTTTCCTCTGCTCTCACACCAACACCACAATCCACACAGAAGACTTCTGTGGCCAAATGCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CAA 72 bp | TCTGTGAGATCTGACACTATCTTCATGCAGACAGTGTaGGAACTGAACTGGAGGACAGCCAGTTGGTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SVRSDTIFMQTV*ELNWRTASWLL Trigger: AAGCAACCAACTGGCTGTCCTCCAGTTCAGTTCCAACACTGTCTGCATGAAGATAGTGTCAGATCTCACAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS GCA 72 bp | TCCCCACAGTCGTCTCATTTTACAGCATTTCGTGGGTaGTTGTACACACTAACATCTGACTTCATAACCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPQSSHFTAFRG*LYTLTSDFITS Trigger: GCTGGTTATGAAGTCAGATGTTAGTGTGTACAAGCACCCACGAAATGCTGTAAAATGAGACGACTGTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598440.1 |
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| CDS GCA 72 bp | GGAAGCTCTGCGCCCCTTTCCCCATACCTCACCTTATaGATCTCTTCACTGGTATCTTCTGTAATAGTATTT | + |
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Preference number: 6 (lower is better) Translates to: GSSAPLSPYLTL*ISSLVSSVIVF Trigger: AAATACTATTACAGAAGATACCAGTGAAGAGATGCATAAGGTGAGGTATGGGGAAAGGGGCGCAGAGCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597544.5 |
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| CDS TCA 72 bp | ATGCAACTGGGAACTGAGCCATCAATCTGTGAGATCTaGCACTATCTTCATGCAGACAGTGTTGGAACTGAA | + |
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Preference number: 6 (lower is better) Translates to: MQLGTEPSICEI*HYLHADSVGTE Trigger: TTCAGTTCCAACACTGTCTGCATGAAGATAGTGTCAGATCTCACAGATTGATGGCTCAGTTCCCAGTTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596373.1 ENST00000597544.5 |
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| CDS CAA 72 bp | CCACAGTCGTCTCATTTTACAGCATTTCGTGGGTGCTaGTACACACTAACATCTGACTTCATAACCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PQSSHFTAFRGC*YTLTSDFITSF Trigger: GAAGCTGGTTATGAAGTCAGATGTTAGTGTGTACAAGCACCCACGAAATGCTGTAAAATGAGACGACTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598440.1 |
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| CDS CAA 90 bp | AAGCTTTCCCCACAGTCGTCTCATTTTACAGCATTTCGTGGGTGCTaGTACACACTAACATCTGACTTCATAACCAGCTTCTCTTATCAC | + |
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Preference number: 6 (lower is better) Translates to: KLSPQSSHFTAFRGC*YTLTSDFITSFSYH Trigger: GTGATAAGAGAAGCTGGTTATGAAGTCAGATGTTAGTGTGTACAAGCACCCACGAAATGCTGTAAAATGAGACGACTGTGGGGAAAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598440.1 |
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| CDS TCA 72 bp | TACAGCATTTCGTGGGTGCTTGTACACACTAACATCTaGCTTCATAACCAGCTTCTCTTATCACAGTTTACA | + |
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Preference number: 6 (lower is better) Translates to: YSISWVLVHTNI*LHNQLLLSQFT Trigger: TGTAAACTGTGATAAGAGAAGCTGGTTATGAAGTCAGATGTTAGTGTGTACAAGCACCCACGAAATGCTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598440.1 |
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| CDS TCA 72 bp | ACAAATGTAGTAGCAATATATGAACCAATTGCTTTGTaGGAAACCCAGTGGTCATTTAAGAGGTTGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: TNVVAIYEPIAL*ETQWSFKRLEL Trigger: GAGTTCCAACCTCTTAAATGACCACTGGGTTTCTCACAAAGCAATTGGTTCATATATTGCTACTACATTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598440.1 |
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