RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF664 (Homo sapiens)

Ensembl gene IDs: ENSG00000179195

Ensembl transcript IDs: ENST00000337815.9, ENST00000392404.7, ENST00000537532.5, ENST00000538932.6, ENST00000539257.5, ENST00000539501.1, ENST00000539644.5, ENST00000540009.1, ENST00000540498.1, ENST00000541448.5, ENST00000542493.5, ENST00000542820.5, ENST00000543017.5, ENST00000546098.5

Found 455 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACCAGCTCATCCCCCAGAGCAGCCTGTGTGCTCTGCCAGCGACTaGTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAG +
Preference number: 1 (lower is better)
Translates to: APAHPPEQPVCSASD*YFSSGLSSTSHRGK
Trigger: CTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCACACAGGCTGCTCTGGGGGATGAGCTGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR GCA 90 bp GCCTGTTCCTTAAACGCACCAGCTCATCCCCCAGAGCAGCCTGTGTaGTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACA +
Preference number: 1 (lower is better)
Translates to: ACSLNAPAHPPEQPV*SASDCYFSSGLSST
Trigger: TGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCACACAGGCTGCTCTGGGGGATGAGCTGGTGCGTTTAAGGAACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR TCA 90 bp GGCATCGTGCTGGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTaGGAGCCATCCTGCGTGGATGCTCAGAGGTCCACATTCAAAGTC +
Preference number: 1 (lower is better)
Translates to: GIVLESQEATSVTGT*EPSCVDAQRSTFKV
Trigger: GACTTTGAATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCCAGCACGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR TCA 90 bp TCAACTATGGAGGCATCGTGCTGGAATCCCAGGAAGCGACGTCTGTaGCTGGGACCTGAGAGCCATCCTGCGTGGATGCTCAGAGGTCCA +
Preference number: 1 (lower is better)
Translates to: STMEASCWNPRKRRL*LGPESHPAWMLRGP
Trigger: TGGACCTCTGAGCATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCCAGCACGATGCCTCCATAGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR CCA 90 bp CTATGGAGGCATCGTGCTGGAATCCCAGGAAGCGACGTCTGTGACTaGGACCTGAGAGCCATCCTGCGTGGATGCTCAGAGGTCCACATT +
Preference number: 1 (lower is better)
Translates to: LWRHRAGIPGSDVCD*DLRAILRGCSEVHI
Trigger: AATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCCAGCACGATGCCTCCATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR GCA 90 bp GGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGATaGTCAGAGGTCCACATTCAAAGTCAACCTGTGGAACACACTTGG +
Preference number: 1 (lower is better)
Translates to: GSDVCDWDLRAILRG*SEVHIQSQPVEHTW
Trigger: CCAAGTGTGTTCCACAGGTTGACTTTGAATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR CCA 90 bp GGAGGCCGGGCAATGATTGTGGCTTTTTGTGTAGTCTTTCAACTATaGAGGCATCGTGCTGGAATCCCAGGAAGCGACGTCTGTGACTGG +
Preference number: 1 (lower is better)
Translates to: GGRAMIVAFCVVFQL*RHRAGIPGSDVCDW
Trigger: CCAGTCACAGACGTCGCTTCCTGGGATTCCAGCACGATGCCTCCATAGTTGAAAGACTACACAAAAAGCCACAATCATTGCCCGGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR CCA 90 bp AGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCTaGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCCTCCCTGCT +
Preference number: 1 (lower is better)
Translates to: RKELHLLPKEPRGQF*MKKSSHFACFFLPA
Trigger: AGCAGGGAGGAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR GCA 90 bp TACCAGAACGTGATCTTAGTGGGAGCTGTCTGTTTTCCAATGCATTaGCAGTATGCTCGAATAAAGAGGAAGGAAGGGCATGAGCTCCTC +
Preference number: 1 (lower is better)
Translates to: YQNVILVGAVCFPMH*QYARIKRKEGHELL
Trigger: GAGGAGCTCATGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACAGCTCCCACTAAGATCACGTTCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR CCA 90 bp CCATCCTGCGTGGATGCTCAGAGGTCCACATTCAAAGTCAACCTGTaGAACACACTTGGCATGAACCAACAAATCAATCTCACATATGCC +
Preference number: 1 (lower is better)
Translates to: PSCVDAQRSTFKVNL*NTLGMNQQINLTYA
Trigger: GGCATATGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAATGTGGACCTCTGAGCATCCACGCAGGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR TCA 90 bp TCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCATaGGCTCCTCAAGGGGGAGTATCTGGGATAGCTTTTAAGCAAAGT +
Preference number: 1 (lower is better)
Translates to: SNALPVCSNKEEGRA*APQGGVSGIAFKQS
Trigger: ACTTTGCTTAAAAGCTATCCCAGATACTCCCCCTTGAGGAGCTCATGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR CCA 90 bp GGATGCTCAGAGGTCCACATTCAAAGTCAACCTGTGGAACACACTTaGCATGAACCAACAAATCAATCTCACATATGCCTCCTCAGAAAC +
Preference number: 1 (lower is better)
Translates to: GCSEVHIQSQPVEHT*HEPTNQSHICLLRN
Trigger: GTTTCTGAGGAGGCATATGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAATGTGGACCTCTGAGCATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR TCA 90 bp CTCAGAGGTCCACATTCAAAGTCAACCTGTGGAACACACTTGGCATaGACCAACAAATCAATCTCACATATGCCTCCTCAGAAACAATGT +
Preference number: 1 (lower is better)
Translates to: LRGPHSKSTCGTHLA*TNKSISHMPPQKQC
Trigger: ACATTGTTTCTGAGGAGGCATATGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAATGTGGACCTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR CCA 90 bp CCTCCTCAGAAACAATGTTCTGCTAGGGATTGCGTAAATATTTCTTaGGTCAATGTAGGTATATACAGGGTTTCCTTCCTAGTGGCACTT +
Preference number: 1 (lower is better)
Translates to: PPQKQCSARDCVNIS*VNVGIYRVSFLVAL
Trigger: AAGTGCCACTAGGAAGGAAACCCTGTATATACCTACATTGACCCAAGAAATATTTACGCAATCCCTAGCAGAACATTGTTTCTGAGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR GCA 90 bp TCAATCTCACATATGCCTCCTCAGAAACAATGTTCTGCTAGGGATTaGGTAAATATTTCTTGGGTCAATGTAGGTATATACAGGGTTTCC +
Preference number: 1 (lower is better)
Translates to: SISHMPPQKQCSARD*VNISWVNVGIYRVS
Trigger: GGAAACCCTGTATATACCTACATTGACCCAAGAAATATTTACGCAATCCCTAGCAGAACATTGTTTCTGAGGAGGCATATGTGAGATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR TCA 90 bp ATAAAGACGTTCATGCCTAACAAAGAACTGATACACAGTAATCAATaGAGGGGTATCAAGAACTCCTATGCATTATTGCCCAAGATTACA +
Preference number: 1 (lower is better)
Translates to: IKTFMPNKELIHSNQ*RGIKNSYALLPKIT
Trigger: TGTAATCTTGGGCAATAATGCATAGGAGTTCTTGATACCCCTTCATTGATTACTGTGTATCAGTTCTTTGTTAGGCATGAACGTCTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGAGGAAGCGACGTCTGTaGCTGGGACCTGAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPRKRRL*LGPESH
Trigger: ATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCT...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGGAGGAAGGAAGGGCATaGGCTCCTCAAGGGGGAGTA +
Preference number: 2 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPEEGRA*APQGGV
Trigger: TACTCCCCCTTGAGGAGCTCATGCCCTTCCTTCCTC...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGAGCGACGTCTGTGACTaGGACCTGAGAGCCATCCTG +
Preference number: 2 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPSDVCD*DLRAIL
Trigger: CAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCT...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGGCCATCCTGCGTGGATaGTCAGAGGTCCACATTCAA +
Preference number: 2 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRAILRG*SEVHIQ
Trigger: TTGAATGTGGACCTCTGAGCATCCACGCAGGATGGC...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGGAGAGCCATCCTGCGTaGATGCTCAGAGGTCCACAT +
Preference number: 2 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPESHPA*MLRGPH
Trigger: ATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTC...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGATGGAGGCATCGTGCTaGAATCCCAGGAAGCGACGT +
Preference number: 2 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPMEASC*NPRKRR
Trigger: ACGTCGCTTCCTGGGATTCCAGCACGATGCCTCCAT...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTACTATGGAGGCATCGTaGTGGAATCCCAGGAAGCGA +
Preference number: 2 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTTMEAS*WNPRKR
Trigger: TCGCTTCCTGGGATTCCAGCACGATGCCTCCATAGT...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGGAAAAGCTCTCACTTTaGTTGCTTCTTCCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPREKLSL*LLLPPC
Trigger: GCAGGGAGGAAGAAGCAAGCAAAGTGAGAGCTTTTC...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGGAGGGCAATTCTGGATaGAGAAAAGCTCTCACTTTG +
Preference number: 2 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPREGNSG*RKALTL
Trigger: CAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTC...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTGAAAAGCTCTCACTTTaGTTGCTTCTTCCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTEKLSL*LLLPPC
Trigger: GCAGGGAGGAAGAAGCAAGCAAAGTGAGAGCTTTTC...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCCCAGAGGGCAATTCTaGATGAAGAAAAGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPPRGQF*MKKSSH
Trigger: GTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGG...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTCCCAGAGGGCAATTCTaGATGAAGAAAAGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTPRGQF*MKKSSH
Trigger: GTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGG...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGTGTCTGTCTCATCAGTaGTATTCCCAGCACCTAGCA +
Preference number: 2 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPCLSHQ*YSQHLA
Trigger: TGCTAGGTGCTGGGAATACCACTGATGAGACAGACA...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTGAGGGCAATTCTGGATaGAGAAAAGCTCTCACTTTG +
Preference number: 2 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTEGNSG*RKALTL
Trigger: CAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTC...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGCCTGTGGAACACACTTaGCATGAACCAACAAATCAA +
Preference number: 2 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRPVEHT*HEPTNQ
Trigger: TTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGG...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGTTCAAAGTCAACCTGTaGAACACACTTGGCATGAAC +
Preference number: 2 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRFKVNL*NTLGMN
Trigger: GTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTGTAGTCTTTCAACTATaGAGGCATCGTGCTGGAATC +
Preference number: 2 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTVVFQL*RHRAGI
Trigger: GATTCCAGCACGATGCCTCCATAGTTGAAAGACTAC...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTGGAACACACTTGGCATaGACCAACAAATCAATCTCA +
Preference number: 2 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTGTHLA*TNKSIS
Trigger: TGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCC...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAATGCATTGCCAGTATaGTCGAATAAAGAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRNALPV*SNKEEG
Trigger: TCCTTCCTCTTTATTCGAGCATACTGGCAATGCATT...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTCCTGTGGAACACACTTaGCATGAACCAACAAATCAA +
Preference number: 2 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTPVEHT*HEPTNQ
Trigger: TTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGG...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCCTGTGGAACACACTTaGCATGAACCAACAAATCAA +
Preference number: 2 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPPVEHT*HEPTNQ
Trigger: TTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGG...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCATGGAGGCATCGTGCTaGAATCCCAGGAAGCGACGT +
Preference number: 2 (lower is better)
Translates to: SLARKELHLLPKEPRGQFMEASC*NPRKRR
Trigger: ACGTCGCTTCCTGGGATTCCAGCACGATGCCTCCAT...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAGGAACACACTTGGCATaGACCAACAAATCAATCTCA +
Preference number: 2 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGGTHLA*TNKSIS
Trigger: TGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCC...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGTACAGAAATAGAGATTaGAACATTAGTGACTCCTCC +
Preference number: 2 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRYRNRD*NISDSS
Trigger: GGAGGAGTCACTAATGTTTCAATCTCTATTTCTGTA...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGATACACAGTAATCAATaGAGGGGTATCAAGAACTCC +
Preference number: 2 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPIHSNQ*RGIKNS
Trigger: GGAGTTCTTGATACCCCTTCATTGATTACTGTGTAT...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCACTATGGAGGCATCGTaGTGGAATCCCAGGAAGCGA +
Preference number: 2 (lower is better)
Translates to: SLARKELHLLPKEPRGQFTMEAS*WNPRKR
Trigger: TCGCTTCCTGGGATTCCAGCACGATGCCTCCATAGT...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGTGTTTTCCAATGCATTaGCAGTATGCTCGAATAAAG +
Preference number: 2 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRCFPMH*QYARIK
Trigger: CTTTATTCGAGCATACTGGCAATGCATTGGAAAACA...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCCATCTAGGAAGGGATaGATATTTATGGGGATTTTG +
Preference number: 2 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPPSRKG*IFMGIL
Trigger: CAAAATCCCCATAAATATCCATCCCTTCCTAGATGG...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTCCATCTAGGAAGGGATaGATATTTATGGGGATTTTG +
Preference number: 2 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTPSRKG*IFMGIL
Trigger: CAAAATCCCCATAAATATCCATCCCTTCCTAGATGG...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAAGGAAGCGACGTCTGTaGCTGGGACCTGAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVRKRRL*LGPESH
Trigger: ATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCT...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTTGTTTTCCAATGCATTaGCAGTATGCTCGAATAAAG +
Preference number: 2 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTCFPMH*QYARIK
Trigger: CTTTATTCGAGCATACTGGCAATGCATTGGAAAACA...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGTTGCTTCTTCCTCCCTaGTATTTACATTCAGCTATT +
Preference number: 2 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPLLLPP*YLHSAI
Trigger: AATAGCTGAATGTAAATAGCAGGGAGGAAGAAGCAA...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTTCTGTGACTGGGACCTaGGAGCCATCCTGCGTGGAT +
Preference number: 2 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFSVTGT*EPSCVD
Trigger: ATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGA...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGAGGAAGGAAGGGCATaGGCTCCTCAAGGGGGAGTA +
Preference number: 2 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFEEGRA*APQGGV
Trigger: TACTCCCCCTTGAGGAGCTCATGCCCTTCCTTCCTC...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGAATCAATCTCACATATaGCTCCTCAGAAACAATGTT +
Preference number: 2 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPNQSHI*LLRNNV
Trigger: AACATTGTTTCTGAGGAGGCATATGTGAGATTGATT...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAATGGAGGCATCGTGCTaGAATCCCAGGAAGCGACGT +
Preference number: 2 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVMEASC*NPRKRR
Trigger: ACGTCGCTTCCTGGGATTCCAGCACGATGCCTCCAT...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAAGGAAGCGACGTCTGTaGCTGGGACCTGAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: CLFSNALPVCSNKEEGRARKRRL*LGPESH
Trigger: ATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCT...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAAATCAATCTCACATATaGCTCCTCAGAAACAATGTT +
Preference number: 2 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGNQSHI*LLRNNV
Trigger: AACATTGTTTCTGAGGAGGCATATGTGAGATTGATT...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGAGAGCCATCCTGCGTaGATGCTCAGAGGTCCACAT +
Preference number: 2 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFESHPA*MLRGPH
Trigger: ATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTC...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTATGGAGGCATCGTGCTaGAATCCCAGGAAGCGACGT +
Preference number: 2 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFMEASC*NPRKRR
Trigger: ACGTCGCTTCCTGGGATTCCAGCACGATGCCTCCAT...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCGGAACACACTTGGCATaGACCAACAAATCAATCTCA +
Preference number: 2 (lower is better)
Translates to: SLARKELHLLPKEPRGQFGTHLA*TNKSIS
Trigger: TGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCC...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCCATCCTGCGTGGATaGTCAGAGGTCCACATTCAA +
Preference number: 2 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFAILRG*SEVHIQ
Trigger: TTGAATGTGGACCTCTGAGCATCCACGCAGGATGGC...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCCTGTCTGTTTTCCAATaGATTGCCAGTATGCTCGAA +
Preference number: 2 (lower is better)
Translates to: SLARKELHLLPKEPRGQFLSVFQ*IASMLE
Trigger: TTCGAGCATACTGGCAATGCATTGGAAAACAGACAG...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAGAGAGCCATCCTGCGTaGATGCTCAGAGGTCCACAT +
Preference number: 2 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAESHPA*MLRGPH
Trigger: ATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTC...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTACCCAGAGGGCAATTCTaGATGAAGAAAAGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVPRGQF*MKKSSH
Trigger: GTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGG...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAGTAGTCTTTCAACTATaGAGGCATCGTGCTGGAATC +
Preference number: 2 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVVVFQL*RHRAGI
Trigger: GATTCCAGCACGATGCCTCCATAGTTGAAAGACTAC...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGGAACACACTTGGCATaGACCAACAAATCAATCTCA +
Preference number: 2 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFGTHLA*TNKSIS
Trigger: TGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCC...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAAATGCATTGCCAGTATaGTCGAATAAAGAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVNALPV*SNKEEG
Trigger: TCCTTCCTCTTTATTCGAGCATACTGGCAATGCATT...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCAGCGACGTCTGTGACTaGGACCTGAGAGCCATCCTG +
Preference number: 2 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPSDVCD*DLRAIL
Trigger: CAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCT...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAGTAGTCTTTCAACTATaGAGGCATCGTGCTGGAATC +
Preference number: 2 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAVVFQL*RHRAGI
Trigger: GATTCCAGCACGATGCCTCCATAGTTGAAAGACTAC...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTAATGCATTGCCAGTATaGTCGAATAAAGAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFNALPV*SNKEEG
Trigger: TCCTTCCTCTTTATTCGAGCATACTGGCAATGCATT...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCATTCAAAGTCAACCTGTaGAACACACTTGGCATGAAC +
Preference number: 2 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAFKVNL*NTLGMN
Trigger: GTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCGAGAGCCATCCTGCGTaGATGCTCAGAGGTCCACAT +
Preference number: 2 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPESHPA*MLRGPH
Trigger: ATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTC...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTCCATCTAGGAAGGGATaGATATTTATGGGGATTTTG +
Preference number: 2 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFPSRKG*IFMGIL
Trigger: CAAAATCCCCATAAATATCCATCCCTTCCTAGATGG...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCAATCAATCTCACATATaGCTCCTCAGAAACAATGTT +
Preference number: 2 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFNQSHI*LLRNNV
Trigger: AACATTGTTTCTGAGGAGGCATATGTGAGATTGATT...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCACTATGGAGGCATCGTaGTGGAATCCCAGGAAGCGA +
Preference number: 2 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPTMEAS*WNPRKR
Trigger: TCGCTTCCTGGGATTCCAGCACGATGCCTCCATAGT...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTTGTTTTCCAATGCATTaGCAGTATGCTCGAATAAAG +
Preference number: 2 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFCFPMH*QYARIK
Trigger: CTTTATTCGAGCATACTGGCAATGCATTGGAAAACA...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR GCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTTTGCTTCTTCCTCCCTaGTATTTACATTCAGCTATT +
Preference number: 2 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFLLLPP*YLHSAI
Trigger: AATAGCTGAATGTAAATAGCAGGGAGGAAGAAGCAA...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCAGTATAGATAGAAGGTaGCTCAGGAGGCCGGGCAAT +
Preference number: 2 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPSIDRR*LRRPGN
Trigger: ATTGCCCGGCCTCCTGAGTCACCTTCTATCTATACT...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCTCCCCAAAGACTTCCTaGGCAAAAGGACTACATGTG +
Preference number: 2 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPSPKTS*AKGLHV
Trigger: CACATGTAGTCCTTTTGCTCAGGAAGTCTTTGGGGA...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCTGTCTGTCTCATCAGTaGTATTCCCAGCACCTAGCA +
Preference number: 2 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPCLSHQ*YSQHLA
Trigger: TGCTAGGTGCTGGGAATACCACTGATGAGACAGACA...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCCAGACACCACTAACCTaGTCACCTATTTCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPQTPLT*SPISEL
Trigger: AAGCTCTGAAATAGGTGATCAGGTTAGTGGTGTCTG...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCATACACAGTAATCAATaGAGGGGTATCAAGAACTCC +
Preference number: 2 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPIHSNQ*RGIKNS
Trigger: GGAGTTCTTGATACCCCTTCATTGATTACTGTGTAT...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR TCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCCACGCTATTGTGACATaGAAGAGTGATAAGACACTA +
Preference number: 2 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPHAIVT*KSDKTL
Trigger: TAGTGTCTTATCACTCTTTCATGTCACAATAGCGTG...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCCCATCTAGGAAGGGATaGATATTTATGGGGATTTTG +
Preference number: 2 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPPSRKG*IFMGIL
Trigger: CAAAATCCCCATAAATATCCATCCCTTCCTAGATGG...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR GCA 72 bp CGCACCAGCTCATCCCCCAGAGCAGCCTGTGTGCTCTaGCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTC +
Preference number: 3 (lower is better)
Translates to: RTSSSPRAACVL*QRLLLLLRPQL
Trigger: GAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCACACAGGCTGCTCTGGGGGATGAGCTGGTGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR GCA 72 bp CATCCCCCAGAGCAGCCTGTGTGCTCTGCCAGCGACTaGTACTTCTCCTCCGGCCTCAGCTCAACATCCCAC +
Preference number: 3 (lower is better)
Translates to: HPPEQPVCSASD*YFSSGLSSTSH
Trigger: GTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCACACAGGCTGCTCTGGGGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR TCA 72 bp GAGGCATCGTGCTGGAATCCCAGGAAGCGACGTCTGTaGCTGGGACCTGAGAGCCATCCTGCGTGGATGCTC +
Preference number: 3 (lower is better)
Translates to: EASCWNPRKRRL*LGPESHPAWML
Trigger: GAGCATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCCAGCACGATGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR GCA 72 bp TTAAACGCACCAGCTCATCCCCCAGAGCAGCCTGTGTaGTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTC +
Preference number: 3 (lower is better)
Translates to: LNAPAHPPEQPV*SASDCYFSSGL
Trigger: GAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCACACAGGCTGCTCTGGGGGATGAGCTGGTGCGTTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR TCA 72 bp CTGGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTaGGAGCCATCCTGCGTGGATGCTCAGAGGTCCACA +
Preference number: 3 (lower is better)
Translates to: LESQEATSVTGT*EPSCVDAQRST
Trigger: TGTGGACCTCTGAGCATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR CCA 72 bp CATCGTGCTGGAATCCCAGGAAGCGACGTCTGTGACTaGGACCTGAGAGCCATCCTGCGTGGATGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: HRAGIPGSDVCD*DLRAILRGCSE
Trigger: CTCTGAGCATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCCAGCACGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CAA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGCTGTTTTCCAATGCATaGCCAGTATGCTCGAATAAA +
Preference number: 3 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRLFSNA*PVCSNK
Trigger: TTTATTCGAGCATACTGGCAATGCATTGGAAAACAG...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR GCA 72 bp GTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGATaGTCAGAGGTCCACATTCAAAGTCAACCTGTGGAA +
Preference number: 3 (lower is better)
Translates to: VCDWDLRAILRG*SEVHIQSQPVE
Trigger: TTCCACAGGTTGACTTTGAATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CAA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTCTGTTTTCCAATGCATaGCCAGTATGCTCGAATAAA +
Preference number: 3 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTLFSNA*PVCSNK
Trigger: TTTATTCGAGCATACTGGCAATGCATTGGAAAACAG...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR CCA 72 bp GCAATGATTGTGGCTTTTTGTGTAGTCTTTCAACTATaGAGGCATCGTGCTGGAATCCCAGGAAGCGACGTC +
Preference number: 3 (lower is better)
Translates to: AMIVAFCVVFQL*RHRAGIPGSDV
Trigger: GACGTCGCTTCCTGGGATTCCAGCACGATGCCTCCATAGTTGAAAGACTACACAAAAAGCCACAATCATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR CCA 72 bp CTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCTaGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: LHLLPKEPRGQF*MKKSSHFACFF
Trigger: GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR GCA 72 bp GTGATCTTAGTGGGAGCTGTCTGTTTTCCAATGCATTaGCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAT +
Preference number: 3 (lower is better)
Translates to: VILVGAVCFPMH*QYARIKRKEGH
Trigger: ATGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACAGCTCCCACTAAGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR CCA 72 bp GTGGATGCTCAGAGGTCCACATTCAAAGTCAACCTGTaGAACACACTTGGCATGAACCAACAAATCAATCTC +
Preference number: 3 (lower is better)
Translates to: VDAQRSTFKVNL*NTLGMNQQINL
Trigger: GAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAATGTGGACCTCTGAGCATCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR-3UTR CAA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCCTGTTTTCCAATGCATaGCCAGTATGCTCGAATAAA +
Preference number: 3 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFLFSNA*PVCSNK
Trigger: TTTATTCGAGCATACTGGCAATGCATTGGAAAACAG...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR TCA 72 bp CCACATTCAAAGTCAACCTGTGGAACACACTTGGCATaGACCAACAAATCAATCTCACATATGCCTCCTCAG +
Preference number: 3 (lower is better)
Translates to: PHSKSTCGTHLA*TNKSISHMPPQ
Trigger: CTGAGGAGGCATATGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR GCA 72 bp CACACTTGGCATGAACCAACAAATCAATCTCACATATaGCTCCTCAGAAACAATGTTCTGCTAGGGATTGCG +
Preference number: 3 (lower is better)
Translates to: HTWHEPTNQSHI*LLRNNVLLGIA
Trigger: CGCAATCCCTAGCAGAACATTGTTTCTGAGGAGGCATATGTGAGATTGATTTGTTGGTTCATGCCAAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR CCA 72 bp GAAGTGACTTACCAAAGGCTTGTTAGCAGAGATGTCTaGATTAAAATCCAGATATTGACAAATTCACCCCCA +
Preference number: 3 (lower is better)
Translates to: EVTYQRLVSRDV*IKIQILTNSPP
Trigger: TGGGGGTGAATTTGTCAATATCTGGATTTTAATCCAGACATCTCTGCTAACAAGCCTTTGGTAAGTCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR TCA 72 bp TTCATGCCTAACAAAGAACTGATACACAGTAATCAATaGAGGGGTATCAAGAACTCCTATGCATTATTGCCC +
Preference number: 3 (lower is better)
Translates to: FMPNKELIHSNQ*RGIKNSYALLP
Trigger: GGGCAATAATGCATAGGAGTTCTTGATACCCCTTCATTGATTACTGTGTATCAGTTCTTTGTTAGGCATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR CCA 72 bp AAACAATGTTCTGCTAGGGATTGCGTAAATATTTCTTaGGTCAATGTAGGTATATACAGGGTTTCCTTCCTA +
Preference number: 3 (lower is better)
Translates to: KQCSARDCVNIS*VNVGIYRVSFL
Trigger: TAGGAAGGAAACCCTGTATATACCTACATTGACCCAAGAAATATTTACGCAATCCCTAGCAGAACATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGGGGACACCTCACAGGTaGGCCTCCGAGCCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRGTPHR*ASEPRA
Trigger: CGCGCGCGGCTCGGAGGCGCACCTGTGAGGTGTCCC...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGGCGGCAGCAGCCTTCTaGGCTGGGTGCGCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRAAAAF*AGCARG
Trigger: ACCCCTCGCGCACCCAGCGCAGAAGGCTGCTGCCGC...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTGCGGCAGCAGCCTTCTaGGCTGGGTGCGCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTAAAAF*AGCARG
Trigger: ACCCCTCGCGCACCCAGCGCAGAAGGCTGCTGCCGC...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGCCAGAGCAGCCTGTGTaGTCTGCCAGCGACTGCTAC +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRPEQPV*SASDCY
Trigger: GTAGCAGTCGCTGGCAGAGCACACAGGCTGCTCTGG...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAAGCAGCCTTCTGCGCTaGGTGCGCGAGGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGSSLLR*VREGFL
Trigger: GAGGAACCCCTCGCGCACCCAGCGCAGAAGGCTGCT...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGCTCGGGGTCCAGGTATaGCAAGCCCTGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRLGVQV*QALLWG
Trigger: TCCCCAAAGCAGGGCTTGCCATACCTGGACCCCGAG...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGCGGCTCCAACAACAATaGAGCCTGGCTCGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRRLQQQ*SLARES
Trigger: GGACTCCCGAGCCAGGCTCCATTGTTGTTGGAGCCG...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS-3UTR TCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAGGAAGCGACGTCTGTaGCTGGGACCTGAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRRKRRL*LGPESH
Trigger: ATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCT...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGGCGGAAAGGCCTCCCTaGCCACTAGCTAATGTCACC +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRAERPP*PLANVT
Trigger: GGTGACATTAGCTAGTGGTCAGGGAGGCCTTTCCGC...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGCTGGTCTCGAGCCCCTaGAGTTGCCCCTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRLVSSP*SCPLKS
Trigger: ACTCTTCAAGGGGCAACTGCAGGGGCTCGAGACCAG...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGCGAAGGATGAGATACTaGTGGCTGGTCTCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRRRMRY*WLVSSP
Trigger: GGGGCTCGAGACCAGCCAGCAGTATCTCATCCTTCG...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCCAGAGCAGCCTGTGTaGTCTGCCAGCGACTGCTAC +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPPEQPV*SASDCY
Trigger: GTAGCAGTCGCTGGCAGAGCACACAGGCTGCTCTGG...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCCCTTCCCCACTGCTTaGGAATGCCAGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPPFPTA*ECQCWP
Trigger: AGGCCAGCACTGGCATTCGCAAGCAGTGGGGAAGGG...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTTCTGTGACTGGGACCTaGGAGCCATCCTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTSVTGT*EPSCVD
Trigger: ATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGA...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCGCGGCAGCAGCCTTCTaGGCTGGGTGCGCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFAAAAF*AGCARG
Trigger: ACCCCTCGCGCACCCAGCGCAGAAGGCTGCTGCCGC...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTCTGGTCTCGAGCCCCTaGAGTTGCCCCTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTLVSSP*SCPLKS
Trigger: ACTCTTCAAGGGGCAACTGCAGGGGCTCGAGACCAG...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTCGAAGGATGAGATACTaGTGGCTGGTCTCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTRRMRY*WLVSSP
Trigger: GGGGCTCGAGACCAGCCAGCAGTATCTCATCCTTCG...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGGGACTCTTTGATGCATaGAGAGGCTGGAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRGLFDA*RGWRCA
Trigger: GGCACACCTCCAGCCTCTGCATGCATCAAAGAGTCC...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGACTCGGGGTCCAGGTATaGCAAGCCCTGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGLGVQV*QALLWG
Trigger: TCCCCAAAGCAGGGCTTGCCATACCTGGACCCCGAG...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGGGCTCGTACTCTGACTaGAGGCCTTTCCGCACTCAT +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPGSYSD*RPFRTH
Trigger: ATGAGTGCGGAAAGGCCTTCAGTCAGAGTACGAGCC...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAAGGAAGCGACGTCTGTaGCTGGGACCTGAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGRKRRL*LGPESH
Trigger: ATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCT...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAGAGGAAGGAAGGGCATaGGCTCCTCAAGGGGGAGTA +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGEEGRA*APQGGV
Trigger: TACTCCCCCTTGAGGAGCTCATGCCCTTCCTTCCTC...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGTCGAGCCCCTGCAGTTaGCCCTTGAAGAGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRSSPCS*PLKSQF
Trigger: AAACTGACTCTTCAAGGGGCAACTGCAGGGGCTCGA...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTGAGAGCCATCCTGCGTaGATGCTCAGAGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTESHPA*MLRGPH
Trigger: ATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTC...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAAGCGACGTCTGTGACTaGGACCTGAGAGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGSDVCD*DLRAIL
Trigger: CAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCT...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTATGGAGGCATCGTGCTaGAATCCCAGGAAGCGACGT +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTMEASC*NPRKRR
Trigger: ACGTCGCTTCCTGGGATTCCAGCACGATGCCTCCAT...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTCCCTGTATCGAAGGATaGGATACTGCTGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTPCIEG*DTAGWS
Trigger: AGACCAGCCAGCAGTATCTCATCCTTCGATACAGGG...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCCCTGTATCGAAGGATaGGATACTGCTGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPPCIEG*DTAGWS
Trigger: AGACCAGCCAGCAGTATCTCATCCTTCGATACAGGG...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGGTCAGTTTGGCATTCTaGCTCCTGCACATCAGACAG +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRVSLAF*LLHIRQ
Trigger: CTGTCTGATGTGCAGGAGGCAGAATGCCAAACTGAC...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGGCCATCCTGCGTGGATaGTCAGAGGTCCACATTCAA +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPAILRG*SEVHIQ
Trigger: TTGAATGTGGACCTCTGAGCATCCACGCAGGATGGC...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGATCCGGCCCTTGTTGTaGTCAAACAATGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPIRPLL*SNNGGV
Trigger: GACGCCTCCATTGTTTGACCACAACAAGGGCCGGAT...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGTGGCAAGCCCTGCTTTaGGGAATTCCCTACATGGGT +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPWQALL*GIPYMG
Trigger: ACCCATGTAGGGAATTCCCCAAAGCAGGGCTTGCCA...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAACCTTTGCGTTTTTaGGCCCCTGGAATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRKPLRF*APGIFL
Trigger: GAGGAAGATTCCAGGGGCTCAAAAACGCAAAGGTTT...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTGAGCAAGACTCACAGTaGCAGGATCAAAACCCCCAA +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTEQDSQ*QDQNPQ
Trigger: TTGGGGGTTTTGATCCTGTCACTGTGAGTCTTGCTC...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS-3UTR GCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGGGACACCTCACAGGTaGGCCTCCGAGCCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFGTPHR*ASEPRA
Trigger: CGCGCGCGGCTCGGAGGCGCACCTGTGAGGTGTCCC...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCGATGCTCGCCTCCTCTaGCGGACGCAGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFDARLL*RTQGAS
Trigger: GGAGGCGCCCTGCGTCCGGCAGAGGAGGCGAGCATC...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337815.9
ENST00000538932.6
CDS-3UTR GCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCGCCTTCTGCGCTGGGTaGGCGAGGGGTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFAFCAG*ARGSSS
Trigger: TGATGAGGAACCCCTCGCGCACCCAGCGCAGAAGGC...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTGTCAGTTTGGCATTCTaGCTCCTGCACATCAGACAG +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTVSLAF*LLHIRQ
Trigger: CTGTCTGATGTGCAGGAGGCAGAATGCCAAACTGAC...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGATCGAGCCCCTGCAGTTaGCCCTTGAAGAGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGSSPCS*PLKSQF
Trigger: AAACTGACTCTTCAAGGGGCAACTGCAGGGGCTCGA...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGCGGAAGGTTTCTTCCTaGATAGTGTTCCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRRKVSS*IVFLTQ
Trigger: CTGAGTGAGGAACACTATGCAGGAAGAAACCTTCCG...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAACTATGGAGGCATCGTaGTGGAATCCCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGTMEAS*WNPRKR
Trigger: TCGCTTCCTGGGATTCCAGCACGATGCCTCCATAGT...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGGGGGAATTCCCTACATaGGTATCATGCCGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPGEFPT*VSCRLL
Trigger: AAGGAGACGGCATGATACCCATGTAGGGAATTCCCC...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAGCCTGGAAGGGGCTTTaGCAAATAACTAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGAWKGL*QITKPA
Trigger: GGCTGGCTTAGTTATTTGCCAAAGCCCCTTCCAGGC...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTACTCCCGGGACCCGCCTaGAAGGGCTCCAAGACGCGG +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVLPGPA*KGSKTR
Trigger: CCGCGTCTTGGAGCCCTTCCAGGCGGGTCCCGGGAG...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS-3UTR TCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAAGTATAGATAGAAGGTaGCTCAGGAGGCCGGGCAAT +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGSIDRR*LRRPGN
Trigger: ATTGCCCGGCCTCCTGAGTCACCTTCTATCTATACT...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGTCCCCAAAGACTTCCTaGGCAAAAGGACTACATGTG +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPSPKTS*AKGLHV
Trigger: CACATGTAGTCCTTTTGCTCAGGAAGTCTTTGGGGA...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTTGCGCGGAGCCGCTCTaGCCTTCCCCGCCATCCCGA +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFCAEPL*PSPPSR
Trigger: TCGGGATGGCGGGGAAGGTCAGAGCGGCTCCGCGCA...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS-3UTR GCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAGGGACACCTCACAGGTaGGCCTCCGAGCCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAGTPHR*ASEPRA
Trigger: CGCGCGCGGCTCGGAGGCGCACCTGTGAGGTGTCCC...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGGTAGTCTTTCAACTATaGAGGCATCGTGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRVVFQL*RHRAGI
Trigger: GATTCCAGCACGATGCCTCCATAGTTGAAAGACTAC...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTTGTCTGTCTCATCAGTaGTATTCCCAGCACCTAGCA +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTCLSHQ*YSQHLA
Trigger: TGCTAGGTGCTGGGAATACCACTGATGAGACAGACA...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCAGGAAGCGACGTCTGTaGCTGGGACCTGAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFRKRRL*LGPESH
Trigger: ATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCT...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCGAGGAAGGAAGGGCATaGGCTCCTCAAGGGGGAGTA +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFEEGRA*APQGGV
Trigger: TACTCCCCCTTGAGGAGCTCATGCCCTTCCTTCCTC...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCGCGGAAAGGCCTCCCTaGCCACTAGCTAATGTCACC +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFAERPP*PLANVT
Trigger: GGTGACATTAGCTAGTGGTCAGGGAGGCCTTTCCGC...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCAGACACCACTAACCTaGTCACCTATTTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPQTPLT*SPISEL
Trigger: AAGCTCTGAAATAGGTGATCAGGTTAGTGGTGTCTG...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCCTGGTCTCGAGCCCCTaGAGTTGCCCCTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFLVSSP*SCPLKS
Trigger: ACTCTTCAAGGGGCAACTGCAGGGGCTCGAGACCAG...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCCGAAGGATGAGATACTaGTGGCTGGTCTCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFRRMRY*WLVSSP
Trigger: GGGGCTCGAGACCAGCCAGCAGTATCTCATCCTTCG...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAGAAAAGCTCTCACTTTaGTTGCTTCTTCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGEKLSL*LLLPPC
Trigger: GCAGGGAGGAAGAAGCAAGCAAAGTGAGAGCTTTTC...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCAGGATGAGATACTGCTaGCTGGTCTCGAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFRMRYC*LVSSPC
Trigger: GCAGGGGCTCGAGACCAGCCAGCAGTATCTCATCCT...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGACCCAGAGGGCAATTCTaGATGAAGAAAAGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGPRGQF*MKKSSH
Trigger: GTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGG...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAGAGGGCAATTCTGGATaGAGAAAAGCTCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGEGNSG*RKALTL
Trigger: CAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTC...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGACAGACACCACTAACCTaGTCACCTATTTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGQTPLT*SPISEL
Trigger: AAGCTCTGAAATAGGTGATCAGGTTAGTGGTGTCTG...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCGGACGCAGGGCGCCCTaGAAAACACACAGCACCCCA +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFGRRAP*KTHSTP
Trigger: TGGGGTGCTGTGTGTTTTTCAGGGCGCCCTGCGTCC...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS-3UTR GCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCGCCTTCTGCGCTGGGTaGGCGAGGGGTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFAFCAG*ARGSSS
Trigger: TGATGAGGAACCCCTCGCGCACCCAGCGCAGAAGGC...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAGCCTTCTGCGCTGGGTaGGCGAGGGGTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVAFCAG*ARGSSS
Trigger: TGATGAGGAACCCCTCGCGCACCCAGCGCAGAAGGC...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGACAAAGTGCAAACCTTTaGGTTTTTGAGCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGQSANL*VFEPLE
Trigger: TTCCAGGGGCTCAAAAACGCAAAGGTTTGCACTTTG...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTCTGTCTGTTTTCCAATaGATTGCCAGTATGCTCGAA +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTLSVFQ*IASMLE
Trigger: TTCGAGCATACTGGCAATGCATTGGAAAACAGACAG...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCTGTCTGTTTTCCAATaGATTGCCAGTATGCTCGAA +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPLSVFQ*IASMLE
Trigger: TTCGAGCATACTGGCAATGCATTGGAAAACAGACAG...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTCTTATTTGGCCATTTTaGCAGTCTATCTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTLIWPF*QSISGL
Trigger: CAAGCCTGAGATAGACTGCCAAAATGGCCAAATAAG...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGTTCAAAGTCAACCTGTaGAACACACTTGGCATGAAC +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPFKVNL*NTLGMN
Trigger: GTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCGAGAGCCATCCTGCGTaGATGCTCAGAGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFESHPA*MLRGPH
Trigger: ATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTC...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAGCCCATCCTCCGGGATaGGTTGTTTTTCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGAHPPG*VVFLFF
Trigger: AAAGAAAAGAAAAACAACCCATCCCGGAGGATGGGC...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS-3UTR TCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTCTTTGTTTTAGATCCTaGGTTGTCAACATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTLCFRS*VVNIPR
Trigger: CCTTGGAATGTTGACAACTCAGGATCTAAAACAAAG...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGATGCATGCAAAGGTTTaGACTATTACTAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPMHAKV*TITKAP
Trigger: AGGGGCTTTAGTAATAGTTCAAACCTTTGCATGCAT...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGATGCTCCACGCTATTGTaGCATGAAAGAGTGATAAGA +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGCSTLL*HERVIR
Trigger: TCTTATCACTCTTTCATGTCACAATAGCGTGGAGCA...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAAGAACTCACTCCAAGTaGGGGGAGTCAGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVRTHSK*GESAPQ
Trigger: CTGGGGCGCTGACTCCCCTCACTTGGAGTGAGTTCT...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS-3UTR GCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCGCCATCCTGCGTGGATaGTCAGAGGTCCACATTCAA +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFAILRG*SEVHIQ
Trigger: TTGAATGTGGACCTCTGAGCATCCACGCAGGATGGC...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGACTGTCTGTTTTCCAATaGATTGCCAGTATGCTCGAA +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGLSVFQ*IASMLE
Trigger: TTCGAGCATACTGGCAATGCATTGGAAAACAGACAG...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCCCAGAGCAGCCTGTGTaGTCTGCCAGCGACTGCTAC +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFPEQPV*SASDCY
Trigger: GTAGCAGTCGCTGGCAGAGCACACAGGCTGCTCTGG...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTACCAGAGCAGCCTGTGTaGTCTGCCAGCGACTGCTAC +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVPEQPV*SASDCY
Trigger: GTAGCAGTCGCTGGCAGAGCACACAGGCTGCTCTGG...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAAGCAGCCTTCTGCGCTaGGTGCGCGAGGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRASSLLR*VREGFL
Trigger: GAGGAACCCCTCGCGCACCCAGCGCAGAAGGCTGCT...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCCTCGGGGTCCAGGTATaGCAAGCCCTGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFLGVQV*QALLWG
Trigger: TCCCCAAAGCAGGGCTTGCCATACCTGGACCCCGAG...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTACTCGGGGTCCAGGTATaGCAAGCCCTGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVLGVQV*QALLWG
Trigger: TCCCCAAAGCAGGGCTTGCCATACCTGGACCCCGAG...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGACTTATTTGGCCATTTTaGCAGTCTATCTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGLIWPF*QSISGL
Trigger: CAAGCCTGAGATAGACTGCCAAAATGGCCAAATAAG...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAATTCCCTACACATaGGGCACTTGTAGATCATTT +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRKIPYT*GTCRSF
Trigger: AAATGATCTACAAGTGCCCCATGTGTAGGGAATTTT...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGACCTGTGGAACACACTTaGCATGAACCAACAAATCAA +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGPVEHT*HEPTNQ
Trigger: TTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGG...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGATTCAAAGTCAACCTGTaGAACACACTTGGCATGAAC +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGFKVNL*NTLGMN
Trigger: GTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTGTCATTGGGGACTTTTaGTCTTCTAAACATTCCTTG +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTVIGDF*SSKHSL
Trigger: CAAGGAATGTTTAGAAGACCAAAAGTCCCCAATGAC...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCGCCTGGAAGGGGCTTTaGCAAATAACTAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFAWKGL*QITKPA
Trigger: GGCTGGCTTAGTTATTTGCCAAAGCCCCTTCCAGGC...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAATGCATGCAAAGGTTTaGACTATTACTAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGMHAKV*TITKAP
Trigger: AGGGGCTTTAGTAATAGTTCAAACCTTTGCATGCAT...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTATCTGTGACTGGGACCTaGGAGCCATCCTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVSVTGT*EPSCVD
Trigger: ATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGA...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCAGTATAGATAGAAGGTaGCTCAGGAGGCCGGGCAAT +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFSIDRR*LRRPGN
Trigger: ATTGCCCGGCCTCCTGAGTCACCTTCTATCTATACT...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGTACAGAAATAGAGATTaGAACATTAGTGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPYRNRD*NISDSS
Trigger: GGAGGAGTCACTAATGTTTCAATCTCTATTTCTGTA...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAATACACAGTAATCAATaGAGGGGTATCAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGIHSNQ*RGIKNS
Trigger: GGAGTTCTTGATACCCCTTCATTGATTACTGTGTAT...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAGCGGAAAGGCCTCCCTaGCCACTAGCTAATGTCACC +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVAERPP*PLANVT
Trigger: GGTGACATTAGCTAGTGGTCAGGGAGGCCTTTCCGC...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGACACGCTATTGTGACATaGAAGAGTGATAAGACACTA +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGHAIVT*KSDKTL
Trigger: TAGTGTCTTATCACTCTTTCATGTCACAATAGCGTG...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAGCCTTCTGCGCTGGGTaGGCGAGGGGTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAAFCAG*ARGSSS
Trigger: TGATGAGGAACCCCTCGCGCACCCAGCGCAGAAGGC...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCGTCAGTTTGGCATTCTaGCTCCTGCACATCAGACAG +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFVSLAF*LLHIRQ
Trigger: CTGTCTGATGTGCAGGAGGCAGAATGCCAAACTGAC...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAATCAATCTCACATATaGCTCCTCAGAAACAATGTT +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRNQSHI*LLRNNV
Trigger: AACATTGTTTCTGAGGAGGCATATGTGAGATTGATT...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGTGTTTTCCAATGCATTaGCAGTATGCTCGAATAAAG +
Preference number: 4 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPCFPMH*QYARIK
Trigger: CTTTATTCGAGCATACTGGCAATGCATTGGAAAACA...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTTTGCTTCTTCCTCCCTaGTATTTACATTCAGCTATT +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTLLLPP*YLHSAI
Trigger: AATAGCTGAATGTAAATAGCAGGGAGGAAGAAGCAA...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGTATCAAGAACTCCTATaGATTATTGCCCAAGATTAC +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRYQELL*IIAQDY
Trigger: GTAATCTTGGGCAATAATGCATAGGAGTTCTTGATA...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTCCCTTCCCCACTGCTTaGGAATGCCAGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFPFPTA*ECQCWP
Trigger: AGGCCAGCACTGGCATTCGCAAGCAGTGGGGAAGGG...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCGTTGTGGTCAAACAATaGAGGCGTCCGGCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFVVVKQ*RRPAAA
Trigger: TGCTGCCGCCGGACGCCTCCATTGTTTGACCACAAC...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCAGGATGAGATACTGCTaGCTGGTCTCGAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFRMRYC*LVSSPC
Trigger: GCAGGGGCTCGAGACCAGCCAGCAGTATCTCATCCT...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAAGGATGAGATACTGCTaGCTGGTCTCGAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVRMRYC*LVSSPC
Trigger: GCAGGGGCTCGAGACCAGCCAGCAGTATCTCATCCT...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTAAAATTCCCTACACATaGGGCACTTGTAGATCATTT +
Preference number: 4 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTKIPYT*GTCRSF
Trigger: AAATGATCTACAAGTGCCCCATGTGTAGGGAATTTT...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCAGCGACGTCTGTGACTaGGACCTGAGAGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFSDVCD*DLRAIL
Trigger: CAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCT...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAAGCGACGTCTGTGACTaGGACCTGAGAGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVSDVCD*DLRAIL
Trigger: CAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCT...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGACCATCTAGGAAGGGATaGATATTTATGGGGATTTTG +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGPSRKG*IFMGIL
Trigger: CAAAATCCCCATAAATATCCATCCCTTCCTAGATGG...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGGTTAGCAGAGATGTCTaGATTAAAATCCAGATATTG +
Preference number: 4 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRVSRDV*IKIQIL
Trigger: CAATATCTGGATTTTAATCCAGACATCTCTGCTAAC...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTAACAACAATGGAGCCTaGCTCGGGAGTCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFNNNGA*LGSPAP
Trigger: GGGAGCCGGACTCCCGAGCCAGGCTCCATTGTTGTT...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS-3UTR TCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCAGGGCCCACAGTGGCTaGAGGACTACAAAGGCCTTA +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFRAHSG*RTTKAL
Trigger: TAAGGCCTTTGTAGTCCTTCAGCCACTGTGGGCCCT...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAAGGGCCCACAGTGGCTaGAGGACTACAAAGGCCTTA +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVRAHSG*RTTKAL
Trigger: TAAGGCCTTTGTAGTCCTTCAGCCACTGTGGGCCCT...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCAAACCTTTGCGTTTTTaGGCCCCTGGAATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFKPLRF*APGIFL
Trigger: GAGGAAGATTCCAGGGGCTCAAAAACGCAAAGGTTT...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCTCCCCAAAGACTTCCTaGGCAAAAGGACTACATGTG +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFSPKTS*AKGLHV
Trigger: CACATGTAGTCCTTTTGCTCAGGAAGTCTTTGGGGA...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCGGGACACCTCACAGGTaGGCCTCCGAGCCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPGTPHR*ASEPRA
Trigger: CGCGCGCGGCTCGGAGGCGCACCTGTGAGGTGTCCC...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAGGACTCTTTGATGCATaGAGAGGCTGGAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVGLFDA*RGWRCA
Trigger: GGCACACCTCCAGCCTCTGCATGCATCAAAGAGTCC...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCGAAAGAAAGAAAGACTaGAGCCCGGCCGCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFERKKD*SPAAEN
Trigger: GTTCTCGGCGGCCGGGCTGCAGTCTTTCTTTCTTTC...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS-3UTR GCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAACACACAGCACCCCATaGAGCCGGCTCCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTTHSTP*SRLLRS
Trigger: GCTGCGGAGGAGCCGGCTGCATGGGGTGCTGTGTGT...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAAGCAGCCTTCTGCGCTaGGTGCGCGAGGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTSSLLR*VREGFL
Trigger: GAGGAACCCCTCGCGCACCCAGCGCAGAAGGCTGCT...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCCTTAGGATCCTGCTaGGTGAGAATCCGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFALGSC*VRIRPL
Trigger: CAAGGGCCGGATTCTCACCCAGCAGGATCCTAAGGC...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337815.9
ENST00000539644.5
CDS-3UTR CCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGAATAGAGTCTCTTATTTaGCCATTTTGGCAGTCTATC +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGIESLI*PFWQSI
Trigger: GATAGACTGCCAAAATGGCCAAATAAGAGACTCTAT...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAGAGAGCCATCCTGCGTaGATGCTCAGAGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVESHPA*MLRGPH
Trigger: ATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTC...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTAGCGACGTCTGTGACTaGGACCTGAGAGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFSDVCD*DLRAIL
Trigger: CAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCT...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCTGTCTGTCTCATCAGTaGTATTCCCAGCACCTAGCA +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFCLSHQ*YSQHLA
Trigger: TGCTAGGTGCTGGGAATACCACTGATGAGACAGACA...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGGCTCGTACTCTGACTaGAGGCCTTTCCGCACTCAT +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFGSYSD*RPFRTH
Trigger: ATGAGTGCGGAAAGGCCTTCAGTCAGAGTACGAGCC...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCATCTGTGACTGGGACCTaGGAGCCATCCTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRASVTGT*EPSCVD
Trigger: ATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGA...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAGAGGAAGGAAGGGCATaGGCTCCTCAAGGGGGAGTA +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAEEGRA*APQGGV
Trigger: TACTCCCCCTTGAGGAGCTCATGCCCTTCCTTCCTC...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCTGGCATTCTGCCTCCTaGACATCAGACAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFWHSAS*TSDRKA
Trigger: GGCTTTCCTGTCTGATGTGCAGGAGGCAGAATGCCA...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCCAAAGTGCAAACCTTTaGGTTTTTGAGCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFQSANL*VFEPLE
Trigger: TTCCAGGGGCTCAAAAACGCAAAGGTTTGCACTTTG...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGGACTCTTTGATGCATaGAGAGGCTGGAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFGLFDA*RGWRCA
Trigger: GGCACACCTCCAGCCTCTGCATGCATCAAAGAGTCC...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGATATCAAGAACTCCTATaGATTATTGCCCAAGATTAC +
Preference number: 4 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGYQELL*IIAQDY
Trigger: GTAATCTTGGGCAATAATGCATAGGAGTTCTTGATA...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCGATGCTCGCCTCCTCTaGCGGACGCAGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPDARLL*RTQGAL
Trigger: GAGGGCGCCCTGCGTCCGGCAGAGGAGGCGAGCATC...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392404.7
CDS-3UTR GCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCGATGCTCGCCTCCTCTaGCGGACGCAGGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPDARLL*RTQGAL
Trigger: CAGGGCGCCCTGCGTCCGGCAGAGGAGGCGAGCATC...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS-3UTR CCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAATCCGGCCCTTGTTGTaGTCAAACAATGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVIRPLL*SNNGGV
Trigger: GACGCCTCCATTGTTTGACCACAACAAGGGCCGGAT...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCATCCGGCCCTTGTTGTaGTCAAACAATGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFIRPLL*SNNGGV
Trigger: GACGCCTCCATTGTTTGACCACAACAAGGGCCGGAT...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAGCCTTAGGATCCTGCTaGGTGAGAATCCGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAALGSC*VRIRPL
Trigger: CAAGGGCCGGATTCTCACCCAGCAGGATCCTAAGGC...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337815.9
ENST00000539644.5
CDS-3UTR CCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCTGGCAAGCCCTGCTTTaGGGAATTCCCTACATGGGT +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFWQALL*GIPYMG
Trigger: ACCCATGTAGGGAATTCCCCAAAGCAGGGCTTGCCA...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTAAGGCCTTAGGATCCTaGGTGAGAATCCGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFKALGS*VRIRPL
Trigger: CAAGGGCCGGATTCTCACCCAGGATCCTAAGGCCTT...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392404.7
ENST00000538932.6
CDS-3UTR TCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAAGGGCCCACAGTGGCTaGAGGACTACAAAGGCCTTA +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRARAHSG*RTTKAL
Trigger: TAAGGCCTTTGTAGTCCTTCAGCCACTGTGGGCCCT...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCAGTATAGATAGAAGGTaGCTCAGGAGGCCGGGCAAT +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFSIDRR*LRRPGN
Trigger: ATTGCCCGGCCTCCTGAGTCACCTTCTATCTATACT...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCTGCTCCACGCTATTGTaGCATGAAAGAGTGATAAGA +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFCSTLL*HERVIR
Trigger: TCTTATCACTCTTTCATGTCACAATAGCGTGGAGCA...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCAGGTATGGCAAGCCCTaGTTTGGGGAATTCCCTACA +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFRYGKP*FGEFPT
Trigger: TGTAGGGAATTCCCCAAAGCAGGGCTTGCCATACCT...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAAGGTATGGCAAGCCCTaGTTTGGGGAATTCCCTACA +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVRYGKP*FGEFPT
Trigger: TGTAGGGAATTCCCCAAAGCAGGGCTTGCCATACCT...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTACTATGGAGGCATCGTaGTGGAATCCCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFTMEAS*WNPRKR
Trigger: TCGCTTCCTGGGATTCCAGCACGATGCCTCCATAGT...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACACCCTTCCCCACTGCTTaGGAATGCCAGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTPFPTA*ECQCWP
Trigger: AGGCCAGCACTGGCATTCGCAAGCAGTGGGGAAGGG...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTTGGCAAGCCCTGCTTTaGGGAATTCCCTACATGGGT +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFWQALL*GIPYMG
Trigger: ACCCATGTAGGGAATTCCCCAAAGCAGGGCTTGCCA...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCCTGGAAGGGGCTTTaGCAAATAACTAAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFAWKGL*QITKPA
Trigger: GGCTGGCTTAGTTATTTGCCAAAGCCCCTTCCAGGC...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCACCCTGTATCGAAGGATaGGATACTGCTGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAPCIEG*DTAGWS
Trigger: AGACCAGCCAGCAGTATCTCATCCTTCGATACAGGG...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCCTTTGTTTTAGATCCTaGGTTGTCAACATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFLCFRS*VVNIPR
Trigger: CCTTGGAATGTTGACAACTCAGGATCTAAAACAAAG...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCCACGCTATTGTGACATaGAAGAGTGATAAGACACTA +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFHAIVT*KSDKTL
Trigger: TAGTGTCTTATCACTCTTTCATGTCACAATAGCGTG...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTAGGTATGGCAAGCCCTaGTTTGGGGAATTCCCTACA +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFRYGKP*FGEFPT
Trigger: TGTAGGGAATTCCCCAAAGCAGGGCTTGCCATACCT...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCATGGCATTCTGCCTCCTaGACATCAGACAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAWHSAS*TSDRKA
Trigger: GGCTTTCCTGTCTGATGTGCAGGAGGCAGAATGCCA...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCATCGAGCCCCTGCAGTTaGCCCTTGAAGAGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRASSPCS*PLKSQF
Trigger: AAACTGACTCTTCAAGGGGCAACTGCAGGGGCTCGA...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCCGGAAGGTTTCTTCCTaGATAGTGTTCCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFRKVSS*IVFLTQ
Trigger: CTGAGTGAGGAACACTATGCAGGAAGAAACCTTCCG...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCAATGCATTGCCAGTATaGTCGAATAAAGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFNALPV*SNKEEG
Trigger: TCCTTCCTCTTTATTCGAGCATACTGGCAATGCATT...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAGTTGTGGTCAAACAATaGAGGCGTCCGGCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTVVVKQ*RRPAAA
Trigger: TGCTGCCGCCGGACGCCTCCATTGTTTGACCACAAC...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCATGGCAAGCCCTGCTTTaGGGAATTCCCTACATGGGT +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAWQALL*GIPYMG
Trigger: ACCCATGTAGGGAATTCCCCAAAGCAGGGCTTGCCA...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCGCGTTTTTGAGCCCCTaGAATCTTCCTCTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFAFLSP*NLPLVE
Trigger: CTCTACAAGAGGAAGATTCCAGGGGCTCAAAAACGC...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTATGTCTGTCTCATCAGTaGTATTCCCAGCACCTAGCA +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVCLSHQ*YSQHLA
Trigger: TGCTAGGTGCTGGGAATACCACTGATGAGACAGACA...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCGTCATTGGGGACTTTTaGTCTTCTAAACATTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFVIGDF*SSKHSL
Trigger: CAAGGAATGTTTAGAAGACCAAAAGTCCCCAATGAC...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTAAACCTTTGCGTTTTTaGGCCCCTGGAATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFKPLRF*APGIFL
Trigger: GAGGAAGATTCCAGGGGCTCAAAAACGCAAAGGTTT...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAGGCTCGTACTCTGACTaGAGGCCTTTCCGCACTCAT +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTGSYSD*RPFRTH
Trigger: ATGAGTGCGGAAAGGCCTTCAGTCAGAGTACGAGCC...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAGAGGGCAATTCTGGATaGAGAAAAGCTCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVEGNSG*RKALTL
Trigger: CAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTC...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTACAGACACCACTAACCTaGTCACCTATTTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVQTPLT*SPISEL
Trigger: AAGCTCTGAAATAGGTGATCAGGTTAGTGGTGTCTG...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAGTCAGTTTGGCATTCTaGCTCCTGCACATCAGACAG +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAVSLAF*LLHIRQ
Trigger: CTGTCTGATGTGCAGGAGGCAGAATGCCAAACTGAC...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGAAAAGCTCTCACTTTaGTTGCTTCTTCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFEKLSL*LLLPPC
Trigger: GCAGGGAGGAAGAAGCAAGCAAAGTGAGAGCTTTTC...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCGTTTTTGAGCCCCTaGAATCTTCCTCTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFAFLSP*NLPLVE
Trigger: CTCTACAAGAGGAAGATTCCAGGGGCTCAAAAACGC...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCAAAATTCCCTACACATaGGGCACTTGTAGATCATTT +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFKIPYT*GTCRSF
Trigger: AAATGATCTACAAGTGCCCCATGTGTAGGGAATTTT...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCACTGATATTTTGAGATaGTTTCTCTCCTTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SLARKELHLLPKEPRGQFTDILR*FLSFVW
Trigger: CCACACAAAGGAGAGAAACCATCTCAAAATATCAGT...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCGTAGTCTTTCAACTATaGAGGCATCGTGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFVVFQL*RHRAGI
Trigger: GATTCCAGCACGATGCCTCCATAGTTGAAAGACTAC...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
3UTR CAA 72 bp CGTGATCTTAGTGGGAGCTGTCTGTTTTCCAATGCATaGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RDLSGSCLFSNA*PVCSNKEEGRA
Trigger: TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACAGCTCCCACTAAGATCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCATCCCCAAAGACTTCCTaGGCAAAAGGACTACATGTG +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRASPKTS*AKGLHV
Trigger: CACATGTAGTCCTTTTGCTCAGGAAGTCTTTGGGGA...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCTGCTCCACGCTATTGTaGCATGAAAGAGTGATAAGA +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFCSTLL*HERVIR
Trigger: TCTTATCACTCTTTCATGTCACAATAGCGTGGAGCA...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCACGGAAGGTTTCTTCCTaGATAGTGTTCCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRARKVSS*IVFLTQ
Trigger: CTGAGTGAGGAACACTATGCAGGAAGAAACCTTCCG...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAACTATGGAGGCATCGTaGTGGAATCCCAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTTMEAS*WNPRKR
Trigger: TCGCTTCCTGGGATTCCAGCACGATGCCTCCATAGT...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTACTGTCTGTTTTCCAATaGATTGCCAGTATGCTCGAA +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVLSVFQ*IASMLE
Trigger: TTCGAGCATACTGGCAATGCATTGGAAAACAGACAG...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAATCCGGCCCTTGTTGTaGTCAAACAATGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTIRPLL*SNNGGV
Trigger: GACGCCTCCATTGTTTGACCACAACAAGGGCCGGAT...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCCTTATTTGGCCATTTTaGCAGTCTATCTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFLIWPF*QSISGL
Trigger: CAAGCCTGAGATAGACTGCCAAAATGGCCAAATAAG...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCCCTGTGGAACACACTTaGCATGAACCAACAAATCAA +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFPVEHT*HEPTNQ
Trigger: TTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGG...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTACTTTGTTTTAGATCCTaGGTTGTCAACATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVLCFRS*VVNIPR
Trigger: CCTTGGAATGTTGACAACTCAGGATCTAAAACAAAG...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAGAGGGCAATTCTGGATaGAGAAAAGCTCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAEGNSG*RKALTL
Trigger: CAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTC...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCGCGGAAAGGCCTCCCTaGCCACTAGCTAATGTCACC +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPAERPP*PLANVT
Trigger: GGTGACATTAGCTAGTGGTCAGGGAGGCCTTTCCGC...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTACTTCTAAACATTCCTTaGGTTCCTCCACATGAGTTT +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVLLNIP*VPPHEF
Trigger: AAACTCATGTGGAGGAACTCAAGGAATGTTTAGAAG...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCCACGCTATTGTGACATaGAAGAGTGATAAGACACTA +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFHAIVT*KSDKTL
Trigger: TAGTGTCTTATCACTCTTTCATGTCACAATAGCGTG...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCCGAAGGATGAGATACTaGTGGCTGGTCTCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPRRMRY*WLVSSP
Trigger: GGGGCTCGAGACCAGCCAGCAGTATCTCATCCTTCG...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAGGGGAATTCCCTACATaGGTATCATGCCGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTGEFPT*VSCRLL
Trigger: AAGGAGACGGCATGATACCCATGTAGGGAATTCCCC...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCAGGATGAGATACTGCTaGCTGGTCTCGAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPRMRYC*LVSSPC
Trigger: GCAGGGGCTCGAGACCAGCCAGCAGTATCTCATCCT...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTACCATCTAGGAAGGGATaGATATTTATGGGGATTTTG +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVPSRKG*IFMGIL
Trigger: CAAAATCCCCATAAATATCCATCCCTTCCTAGATGG...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAATTTGCAGGTCACAGTaGCAGGATCAAAACCCCCAA +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTICRSQ*QDQNPQ
Trigger: TTGGGGGTTTTGATCCTGTCACTGTGACCTGCAAAT...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
CDS-3UTR TCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTATGCATGCAAAGGTTTaGACTATTACTAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFMHAKV*TITKAP
Trigger: AGGGGCTTTAGTAATAGTTCAAACCTTTGCATGCAT...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTCTTCTAAACATTCCTTaGGTTCCTCCACATGAGTTT +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFLLNIP*VPPHEF
Trigger: AAACTCATGTGGAGGAACTCAAGGAATGTTTAGAAG...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAAGGAGGAAAAGTATCTaGAGTGACTTACCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRARRKSI*SDLPKA
Trigger: AGCCTTTGGTAAGTCACTTCAGATACTTTTCCTCCT...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTCACGCTATTGTGACATaGAAGAGTGATAAGACACTA +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFHAIVT*KSDKTL
Trigger: TAGTGTCTTATCACTCTTTCATGTCACAATAGCGTG...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCGGACTCTTTGATGCATaGAGAGGCTGGAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPGLFDA*RGWRCA
Trigger: GGCACACCTCCAGCCTCTGCATGCATCAAAGAGTCC...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCTGTTTTCCAATGCATTaGCAGTATGCTCGAATAAAG +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFCFPMH*QYARIK
Trigger: CTTTATTCGAGCATACTGGCAATGCATTGGAAAACA...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAGCGTTTTTGAGCCCCTaGAATCTTCCTCTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTAFLSP*NLPLVE
Trigger: CTCTACAAGAGGAAGATTCCAGGGGCTCAAAAACGC...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAATAGAGTCTCTTATTTaGCCATTTTGGCAGTCTATC +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVIESLI*PFWQSI
Trigger: GATAGACTGCCAAAATGGCCAAATAAGAGACTCTAT...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAAAAATTCCCTACACATaGGGCACTTGTAGATCATTT +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVKIPYT*GTCRSF
Trigger: AAATGATCTACAAGTGCCCCATGTGTAGGGAATTTT...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACATGTCTGTCTCATCAGTaGTATTCCCAGCACCTAGCA +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTCLSHQ*YSQHLA
Trigger: TGCTAGGTGCTGGGAATACCACTGATGAGACAGACA...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCACTTTGTTTTAGATCCTaGGTTGTCAACATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRALCFRS*VVNIPR
Trigger: CCTTGGAATGTTGACAACTCAGGATCTAAAACAAAG...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAATACACAGTAATCAATaGAGGGGTATCAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAIHSNQ*RGIKNS
Trigger: GGAGTTCTTGATACCCCTTCATTGATTACTGTGTAT...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACACAGACACCACTAACCTaGTCACCTATTTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTQTPLT*SPISEL
Trigger: AAGCTCTGAAATAGGTGATCAGGTTAGTGGTGTCTG...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCTGGCATTCTGCCTCCTaGACATCAGACAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPWHSAS*TSDRKA
Trigger: GGCTTTCCTGTCTGATGTGCAGGAGGCAGAATGCCA...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCTCGAGCCCCTGCAGTTaGCCCTTGAAGAGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPSSPCS*PLKSQF
Trigger: AAACTGACTCTTCAAGGGGCAACTGCAGGGGCTCGA...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAAATCAATCTCACATATaGCTCCTCAGAAACAATGTT +
Preference number: 4 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVNQSHI*LLRNNV
Trigger: AACATTGTTTCTGAGGAGGCATATGTGAGATTGATT...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCGCCATCCTGCGTGGATaGTCAGAGGTCCACATTCAA +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPAILRG*SEVHIQ
Trigger: TTGAATGTGGACCTCTGAGCATCCACGCAGGATGGC...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAAATGCATTGCCAGTATaGTCGAATAAAGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRANALPV*SNKEEG
Trigger: TCCTTCCTCTTTATTCGAGCATACTGGCAATGCATT...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTACTGATATTTTGAGATaGTTTCTCTCCTTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFTDILR*FLSFVW
Trigger: CCACACAAAGGAGAGAAACCATCTCAAAATATCAGT...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAGTCATTGGGGACTTTTaGTCTTCTAAACATTCCTTG +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAVIGDF*SSKHSL
Trigger: CAAGGAATGTTTAGAAGACCAAAAGTCCCCAATGAC...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCGTTAGCAGAGATGTCTaGATTAAAATCCAGATATTG +
Preference number: 4 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFVSRDV*IKIQIL
Trigger: CAATATCTGGATTTTAATCCAGACATCTCTGCTAAC...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAGGAACACACTTGGCATaGACCAACAAATCAATCTCA +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTGTHLA*TNKSIS
Trigger: TGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCC...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCATACAGAAATAGAGATTaGAACATTAGTGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAYRNRD*NISDSS
Trigger: GGAGGAGTCACTAATGTTTCAATCTCTATTTCTGTA...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAAGGAGGAAAAGTATCTaGAGTGACTTACCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTRRKSI*SDLPKA
Trigger: AGCCTTTGGTAAGTCACTTCAGATACTTTTCCTCCT...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCAGGTATGGCAAGCCCTaGTTTGGGGAATTCCCTACA +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPRYGKP*FGEFPT
Trigger: TGTAGGGAATTCCCCAAAGCAGGGCTTGCCATACCT...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTTATCAAGAACTCCTATaGATTATTGCCCAAGATTAC +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFYQELL*IIAQDY
Trigger: GTAATCTTGGGCAATAATGCATAGGAGTTCTTGATA...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCGGGGAATTCCCTACATaGGTATCATGCCGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPGEFPT*VSCRLL
Trigger: AAGGAGACGGCATGATACCCATGTAGGGAATTCCCC...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACACTTATTTGGCCATTTTaGCAGTCTATCTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTLIWPF*QSISGL
Trigger: CAAGCCTGAGATAGACTGCCAAAATGGCCAAATAAG...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAACTGATATTTTGAGATaGTTTCTCTCCTTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: CLFSNALPVCSNKEEGRATDILR*FLSFVW
Trigger: CCACACAAAGGAGAGAAACCATCTCAAAATATCAGT...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACACCTGTGGAACACACTTaGCATGAACCAACAAATCAA +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTPVEHT*HEPTNQ
Trigger: TTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGG...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGTTAGCAGAGATGTCTaGATTAAAATCCAGATATTG +
Preference number: 4 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFVSRDV*IKIQIL
Trigger: CAATATCTGGATTTTAATCCAGACATCTCTGCTAAC...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCATTTGCAGGTCACAGTaGCAGGATCAAAACCCCCAA +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPICRSQ*QDQNPQ
Trigger: TTGGGGGTTTTGATCCTGTCACTGTGACCTGCAAAT...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
CDS-3UTR TCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCAAACCTTTGCGTTTTTaGGCCCCTGGAATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPKPLRF*APGIFL
Trigger: GAGGAAGATTCCAGGGGCTCAAAAACGCAAAGGTTT...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAATGCATGCAAAGGTTTaGACTATTACTAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTMHAKV*TITKAP
Trigger: AGGGGCTTTAGTAATAGTTCAAACCTTTGCATGCAT...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCCGGAAGGTTTCTTCCTaGATAGTGTTCCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPRKVSS*IVFLTQ
Trigger: CTGAGTGAGGAACACTATGCAGGAAGAAACCTTCCG...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACATGTTTTCCAATGCATTaGCAGTATGCTCGAATAAAG +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTCFPMH*QYARIK
Trigger: CTTTATTCGAGCATACTGGCAATGCATTGGAAAACA...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACATTGCTTCTTCCTCCCTaGTATTTACATTCAGCTATT +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTLLLPP*YLHSAI
Trigger: AATAGCTGAATGTAAATAGCAGGGAGGAAGAAGCAA...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAATAGAGTCTCTTATTTaGCCATTTTGGCAGTCTATC +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTIESLI*PFWQSI
Trigger: GATAGACTGCCAAAATGGCCAAATAAGAGACTCTAT...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCGGAACACACTTGGCATaGACCAACAAATCAATCTCA +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPGTHLA*TNKSIS
Trigger: TGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCC...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR TCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCAGGAGGAAAAGTATCTaGAGTGACTTACCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPRRKSI*SDLPKA
Trigger: AGCCTTTGGTAAGTCACTTCAGATACTTTTCCTCCT...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACATATCAAGAACTCCTATaGATTATTGCCCAAGATTAC +
Preference number: 4 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTYQELL*IIAQDY
Trigger: GTAATCTTGGGCAATAATGCATAGGAGTTCTTGATA...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCTTCAAAGTCAACCTGTaGAACACACTTGGCATGAAC +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPFKVNL*NTLGMN
Trigger: GTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR GCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCTTGCTTCTTCCTCCCTaGTATTTACATTCAGCTATT +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPLLLPP*YLHSAI
Trigger: AATAGCTGAATGTAAATAGCAGGGAGGAAGAAGCAA...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CCA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCATAGAGTCTCTTATTTaGCCATTTTGGCAGTCTATC +
Preference number: 4 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPIESLI*PFWQSI
Trigger: GATAGACTGCCAAAATGGCCAAATAAGAGACTCTAT...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS GCA 90 bp GGGCGCCGCGCACCCACCTCCCTCTCCTCAGGGACACCTCACAGGTaGGCCTCCGAGCCGCGCGCGCGCGCGCTCCGCACACCCAGACGC +
Preference number: 5 (lower is better)
Translates to: GRRAPTSLSSGTPHR*ASEPRARALRTPRR
Trigger: GCGTCTGGGTGTGCGGAGCGCGCGCGCGCGCGGCTCGGAGGCGCACCTGTGAGGTGTCCCTGAGGAGAGGGAGGTGGGTGCGCGGCGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337815.9
ENST00000538932.6
ENST00000539644.5
ENST00000541448.5
ENST00000542820.5
CDS CCA 90 bp GGCGGCAGCGCTCCCCCTTCCCTCGGCTCCAACAACAATGGAGCCTaGCTCGGGAGTCCGGCTCCCGAGGGGCCTCGCCCGGCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: GGSAPPSLGSNNNGA*LGSPAPEGPRPASP
Trigger: GGGCGAGGCCGGGCGAGGCCCCTCGGGAGCCGGACTCCCGAGCCAGGCTCCATTGTTGTTGGAGCCGAGGGAAGGGGGAGCGCTGCCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS CCA 90 bp CGACGAGGGCGGCAGCGCTCCCCCTTCCCTCGGCTCCAACAACAATaGAGCCTGGCTCGGGAGTCCGGCTCCCGAGGGGCCTCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: RRGRQRSPFPRLQQQ*SLARESGSRGASPG
Trigger: GCCGGGCGAGGCCCCTCGGGAGCCGGACTCCCGAGCCAGGCTCCATTGTTGTTGGAGCCGAGGGAAGGGGGAGCGCTGCCGCCCTCGTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS TCA 90 bp GGCAGCAGCCTTCTGCGCTGGGTGCGCGAGGGGTTCCTCATCACCTaGGCGGGATGCTCGCCTCCTCTGCCGGACGCAGGGCGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: GSSLLRWVREGFLIT*AGCSPPLPDAGRPC
Trigger: GCAAGGGCGCCCTGCGTCCGGCAGAGGAGGCGAGCATCCCGCTCAGGTGATGAGGAACCCCTCGCGCACCCAGCGCAGAAGGCTGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537532.5
CDS TCA 90 bp GGCAGCAGCCTTCTGCGCTGGGTGCGCGAGGGGTTCCTCATCACCTaGGCGGGATGCTCGCCTCCTCTGCCGGACGCAGGGCGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: GSSLLRWVREGFLIT*AGCSPPLPDAGRPS
Trigger: GGAAGGGCGCCCTGCGTCCGGCAGAGGAGGCGAGCATCCCGCTCAGGTGATGAGGAACCCCTCGCGCACCCAGCGCAGAAGGCTGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546098.5
CDS TCA 90 bp CACCTGAGCGGGATGCTCGCCTCCTCTGCCGGACGCAGGGCGCCCTaGAAAACACACAGCACCCCATGCAGCCGGCTCCTCCGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: HLSGMLASSAGRRAP*KTHSTPCSRLLRSR
Trigger: GCGGCTGCGGAGGAGCCGGCTGCATGGGGTGCTGTGTGTTTTTCAGGGCGCCCTGCGTCCGGCAGAGGAGGCGAGCATCCCGCTCAGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS TCA 90 bp GGCAGCAGCCTTCTGCGCTGGGTGCGCGAGGGGTTCCTCATCACCTaGGCGGGATGCTCGCCTCCTCTGCCGGACGCAGGGCGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: GSSLLRWVREGFLIT*AGCSPPLPDAGRPE
Trigger: TTCAGGGCGCCCTGCGTCCGGCAGAGGAGGCGAGCATCCCGCTCAGGTGATGAGGAACCCCTCGCGCACCCAGCGCAGAAGGCTGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS TCA 90 bp AAAGAAAGAAAGACTGCAGCCCGGCCGCCGAGAACTCACTCCAAGTaGGGGGAGTCAGCGCCCCAGGCCGCGGGCGCCGCGCACCCACCT +
Preference number: 5 (lower is better)
Translates to: KERKTAARPPRTHSK*GESAPQAAGAAHPP
Trigger: AGGTGGGTGCGCGGCGCCCGCGGCCTGGGGCGCTGACTCCCCTCACTTGGAGTGAGTTCTCGGCGGCCGGGCTGCAGTCTTTCTTTCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS GCA 90 bp ACAGTGAGAAAACTGCAGTCGAGTCCTGGAAGGGGTGAGAACGCCTaGGGAGGCGGGAGTCAGAGGGAAGTGGACAGCGCCGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: TVRKLQSSPGRGENA*GGGSQREVDSAGSR
Trigger: CCGGCTGCCGGCGCTGTCCACTTCCCTCTGACTCCCGCCTCCGCAGGCGTTCTCACCCCTTCCAGGACTCGACTGCAGTTTTCTCACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS CCA 90 bp AGGATCCTGCTGGGTGAGAATCCGGCCCTTGTTGTGGTCAAACAATaGAGGCGTCCGGCGGCAGCAGCCTTCTGCGCTGGGTGCGCGAGG +
Preference number: 5 (lower is better)
Translates to: RILLGENPALVVVKQ*RRPAAAAFCAGCAR
Trigger: CCTCGCGCACCCAGCGCAGAAGGCTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGCAGGATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337815.9
ENST00000537532.5
ENST00000539644.5
CDS CCA 90 bp CCGGTTTACCTGGGTGAGAATCCGGCCCTTGTTGTGGTCAAACAATaGAGGCGTCCGGCGGCAGCAGCCTTCTGCGCTGGGTGCGCGAGG +
Preference number: 5 (lower is better)
Translates to: PVYLGENPALVVVKQ*RRPAAAAFCAGCAR
Trigger: CCTCGCGCACCCAGCGCAGAAGGCTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGTAAACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS CCA 90 bp AGCGCCGGCAGCCGGTTTACCTGGGTGAGAATCCGGCCCTTGTTGTaGTCAAACAATGGAGGCGTCCGGCGGCAGCAGCCTTCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: SAGSRFTWVRIRPLL*SNNGGVRRQQPSAL
Trigger: CAGCGCAGAAGGCTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGTAAACCGGCTGCCGGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS CCA 90 bp CTTAGGATCCTGGGTGAGAATCCGGCCCTTGTTGTGGTCAAACAATaGAGGCGTCCGGCGGCAGCAGCCTTCTGCGCTGGGTGCGCGAGG +
Preference number: 5 (lower is better)
Translates to: LRILGENPALVVVKQ*RRPAAAAFCAGCAR
Trigger: CCTCGCGCACCCAGCGCAGAAGGCTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGATCCTAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392404.7
ENST00000538932.6
ENST00000539257.5
ENST00000542493.5
ENST00000546098.5
CDS CCA 90 bp TTTGCAGGTCTGGGTGAGAATCCGGCCCTTGTTGTGGTCAAACAATaGAGGCGTCCGGCGGCAGCAGCCTTCTGCGCTGGGTGCGCGAGG +
Preference number: 5 (lower is better)
Translates to: FAGLGENPALVVVKQ*RRPAAAAFCAGCAR
Trigger: CCTCGCGCACCCAGCGCAGAAGGCTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGACCTGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541448.5
ENST00000543017.5
CDS TCA 90 bp GGAGTCAGAGGGAAGTGGACAGCGCCGGCAGCCGGTTTACCTGGGTaGGAATCCGGCCCTTGTTGTGGTCAAACAATGGAGGCGTCCGGC +
Preference number: 5 (lower is better)
Translates to: GVRGKWTAPAAGLPG*ESGPCCGQTMEASG
Trigger: GCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGTAAACCGGCTGCCGGCGCTGTCCACTTCCCTCTGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS CCA 90 bp GGCGGGAGTCAGAGGGAAGTGGACAGCGCCGGCAGCCGGTTTACCTaGGTGAGAATCCGGCCCTTGTTGTGGTCAAACAATGGAGGCGTC +
Preference number: 5 (lower is better)
Translates to: GGSQREVDSAGSRFT*VRIRPLLWSNNGGV
Trigger: GACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGTAAACCGGCTGCCGGCGCTGTCCACTTCCCTCTGACTCCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS-3UTR CAA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGATGGCAAGCCCTGCTTaGGGGAATTCCCTACATGGG +
Preference number: 5 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPMASPA*GNSLHG
Trigger: CCCATGTAGGGAATTCCCCAAAGCAGGGCTTGCCAT...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGCCCTGCAGTTGCCCCTaGAAGAGTCAGTTTGGCATT +
Preference number: 5 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRPCSCP*KSQFGI
Trigger: AATGCCAAACTGACTCTTCAAGGGGCAACTGCAGGG...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS CCA 90 bp ACTACAAAGGCCTTAGGATCCTGGGTGAGAATCCGGCCCTTGTTGTaGTCAAACAATGGAGGCGTCCGGCGGCAGCAGCCTTCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: TTKALGSWVRIRPLL*SNNGGVRRQQPSAL
Trigger: CAGCGCAGAAGGCTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGATCCTAAGGCCTTTGTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392404.7
ENST00000538932.6
ENST00000539257.5
ENST00000542493.5
ENST00000546098.5
CDS-3UTR CAA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGAGAATCCGGCCCTTGTaGTGGTCAAACAATGGAGGC +
Preference number: 5 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPRIRPL*WSNNGG
Trigger: GCCTCCATTGTTTGACCACAACAAGGGCCGGATTCT...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTAGAATCCGGCCCTTGTaGTGGTCAAACAATGGAGGC +
Preference number: 5 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTRIRPL*WSNNGG
Trigger: GCCTCCATTGTTTGACCACAACAAGGGCCGGATTCT...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCCCTGCAGTTGCCCCTaGAAGAGTCAGTTTGGCATT +
Preference number: 5 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPPCSCP*KSQFGI
Trigger: AATGCCAAACTGACTCTTCAAGGGGCAACTGCAGGG...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS GCA 90 bp CCCCTGCAGTTGCCCCTTGAAGAGTCAGTTTGGCATTCTGCCTCCTaGACATCAGACAGGAAAGCCTTTCCAGCAAGCAGGCTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: PLQLPLEESVWHSAS*TSDRKAFPASRLLG
Trigger: CCCGAGGAGCCTGCTTGCTGGAAAGGCTTTCCTGTCTGATGTGCAGGAGGCAGAATGCCAAACTGACTCTTCAAGGGGCAACTGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000537532.5
ENST00000538932.6
ENST00000539501.1
ENST00000539644.5
ENST00000541448.5
ENST00000543017.5
ENST00000546098.5
CDS CCA 90 bp GACAGGAAAGCCTTTCCAGCAAGCAGGCTCCTCGGGGTCCAGGTATaGCAAGCCCTGCTTTGGGGAATTCCCTACATGGGTATCATGCCG +
Preference number: 5 (lower is better)
Translates to: DRKAFPASRLLGVQV*QALLWGIPYMGIMP
Trigger: CGGCATGATACCCATGTAGGGAATTCCCCAAAGCAGGGCTTGCCATACCTGGACCCCGAGGAGCCTGCTTGCTGGAAAGGCTTTCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000537532.5
ENST00000538932.6
ENST00000539501.1
ENST00000539644.5
ENST00000541448.5
ENST00000542493.5
ENST00000543017.5
ENST00000546098.5
CDS-3UTR CAA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGGTGAGAATCCGGCCCTaGTTGTGGTCAAACAATGGA +
Preference number: 5 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPVRIRP*LWSNNG
Trigger: TCCATTGTTTGACCACAACAAGGGCCGGATTCTCAC...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGATGTGTCTCTTGGATTaGCAGGTCACAGTGACAGGA +
Preference number: 5 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRMCLLD*QVTVTG
Trigger: TCCTGTCACTGTGACCTGCAAATCCAAGAGACACAT...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
CDS-3UTR CAA 90 bp GGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGACCCTGCAGTTGCCCCTaGAAGAGTCAGTTTGGCATT +
Preference number: 5 (lower is better)
Translates to: GIPGSDVCDWDLRAILRGPCSCP*KSQFGI
Trigger: AATGCCAAACTGACTCTTCAAGGGGCAACTGCAGGG...TCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGCAAACCTTTGCGTTTTaGAGCCCCTGGAATCTTCCT +
Preference number: 5 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRQTFAF*SPWNLP
Trigger: AGGAAGATTCCAGGGGCTCAAAAACGCAAAGGTTTG...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTCAAACCTTTGCGTTTTaGAGCCCCTGGAATCTTCCT +
Preference number: 5 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTQTFAF*SPWNLP
Trigger: AGGAAGATTCCAGGGGCTCAAAAACGCAAAGGTTTG...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGGTTTTAGATCCTGAGTaGTCAACATTCCAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRVLDPE*STFQGA
Trigger: AGCCCCTTGGAATGTTGACAACTCAGGATCTAAAAC...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGAGAAAAGCTCTCACTTaGCTTGCTTCTTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPRKALT*LASSSL
Trigger: CAGGGAGGAAGAAGCAAGCAAAGTGAGAGCTTTTCT...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS GCA 90 bp CCTTTCCAGCAAGCAGGCTCCTCGGGGTCCAGGTATGGCAAGCCCTaGTTTGGGGAATTCCCTACATGGGTATCATGCCGTCTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: PFQQAGSSGSRYGKP*FGEFPTWVSCRLLF
Trigger: AAAAAGGAGACGGCATGATACCCATGTAGGGAATTCCCCAAAGCAGGGCTTGCCATACCTGGACCCCGAGGAGCCTGCTTGCTGGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000537532.5
ENST00000538932.6
ENST00000539501.1
ENST00000539644.5
ENST00000541448.5
ENST00000542493.5
ENST00000543017.5
ENST00000546098.5
CDS GCA 90 bp TATCGAAGGATGAGATACTGCTGGCTGGTCTCGAGCCCCTGCAGTTaGCCCTTGAAGAGTCAGTTTGGCATTCTGCCTCCTGCACATCAG +
Preference number: 5 (lower is better)
Translates to: YRRMRYCWLVSSPCS*PLKSQFGILPPAHQ
Trigger: CTGATGTGCAGGAGGCAGAATGCCAAACTGACTCTTCAAGGGGCAACTGCAGGGGCTCGAGACCAGCCAGCAGTATCTCATCCTTCGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000537532.5
ENST00000538932.6
ENST00000539501.1
ENST00000539644.5
ENST00000541448.5
ENST00000543017.5
CDS CCA 90 bp GCCCCAGAAAGTGAAGTCCAGCAGGCAGAAACAGGAGTCATACAGTaGGGCCTCTCAGCCACAGAAACTCTTATCTGGAGTGACCAAGGC +
Preference number: 5 (lower is better)
Translates to: APESEVQQAETGVIQ*GLSATETLIWSDQG
Trigger: GCCTTGGTCACTCCAGATAAGAGTTTCTGTGGCTGAGAGGCCCCACTGTATGACTCCTGTTTCTGCCTGCTGGACTTCACTTTCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540498.1
CDS-3UTR CAA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGCATAGAGTCTCTTATTaGGCCATTTTGGCAGTCTAT +
Preference number: 5 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRHRVSY*AILAVY
Trigger: ATAGACTGCCAAAATGGCCAAATAAGAGACTCTATG...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp CTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAAATTGGTTGCTTTaGTTCCTGTCATTGGGGACT +
Preference number: 5 (lower is better)
Translates to: LCQRLLLLLRPQLNIPPRKNWLL*FLSLGT
Trigger: AGTCCCCAATGACAGGAACAAAAGCAACCAATTTTT...CCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS TCA 90 bp GCACAGCATGTATACAGAGGTCATCAGATGCCAAGCCCCAGAAAGTaGAGTCCAGCAGGCAGAAACAGGAGTCATACAGTGGGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: AQHVYRGHQMPSPRK*SPAGRNRSHTVGPL
Trigger: GAGAGGCCCCACTGTATGACTCCTGTTTCTGCCTGCTGGACTTCACTTTCTGGGGCTTGGCATCTGATGACCTCTGTATACATGCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540498.1
CDS-3UTR CAA 90 bp GTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCATAGAGTCTCTTATTaGGCCATTTTGGCAGTCTAT +
Preference number: 5 (lower is better)
Translates to: VLCQRLLLLLRPQLNIPPHRVSY*AILAVY
Trigger: ATAGACTGCCAAAATGGCCAAATAAGAGACTCTATG...CGGTGGGATGTTGAGCTGAGGCCGGAGGAGAAGTAGCAGTCGCTGGCAGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp TTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTCATAGAGTCTCTTATTaGGCCATTTTGGCAGTCTAT +
Preference number: 5 (lower is better)
Translates to: FSSGLSSTSHRGKASLTTHRVSY*AILAVY
Trigger: ATAGACTGCCAAAATGGCCAAATAAGAGACTCTATG...AGTGGTCAGGGAGGCCTTTCCGCGGTGGGATGTTGAGCTGAGGCCGGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS TCA 90 bp AAGAAAGGTTTCACAAAGGAGCTGAGTTCTGGGGGAAATGAGAGGTaGTGTGGCGGAGAGATGGATCCGGACGGGAAAATGTCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: KKGFTKELSSGGNER*CGGEMDPDGKMSGR
Trigger: CCTCCCAGACATTTTCCCGTCCGGATCCATCTCTCCGCCACATCACCTCTCATTTCCCCCAGAACTCAGCTCCTTTGTGAAACCTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS TCA 90 bp GTTCGGCAAGAAAGGTTTCACAAAGGAGCTGAGTTCTGGGGGAAATaGGAGGTGATGTGGCGGAGAGATGGATCCGGACGGGAAAATGTC +
Preference number: 5 (lower is better)
Translates to: VRQERFHKGAEFWGK*EVMWRRDGSGRENV
Trigger: GACATTTTCCCGTCCGGATCCATCTCTCCGCCACATCACCTCTCATTTCCCCCAGAACTCAGCTCCTTTGTGAAACCTTTCTTGCCGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS GCA 90 bp CACATAAAGAACAGGAGGCACAGCATGTATACAGAGGTCATCAGATaGCAAGCCCCAGAAAGTGAAGTCCAGCAGGCAGAAACAGGAGTC +
Preference number: 5 (lower is better)
Translates to: HIKNRRHSMYTEVIR*QAPESEVQQAETGV
Trigger: GACTCCTGTTTCTGCCTGCTGGACTTCACTTTCTGGGGCTTGGCATCTGATGACCTCTGTATACATGCTGTGCCTCCTGTTCTTTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540498.1
CDS-3UTR CAA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTATGGCAAGCCCTGCTTaGGGGAATTCCCTACATGGG +
Preference number: 5 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFMASPA*GNSLHG
Trigger: CCCATGTAGGGAATTCCCCAAAGCAGGGCTTGCCAT...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTACCCTGCAGTTGCCCCTaGAAGAGTCAGTTTGGCATT +
Preference number: 5 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVPCSCP*KSQFGI
Trigger: AATGCCAAACTGACTCTTCAAGGGGCAACTGCAGGG...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCGTTTTAGATCCTGAGTaGTCAACATTCCAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: SLARKELHLLPKEPRGQFVLDPE*STFQGA
Trigger: AGCCCCTTGGAATGTTGACAACTCAGGATCTAAAAC...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS GCA 90 bp ACAGGAGATAATGCAGCCAGAAAGAGAGAGAGAAGAGAGAACATTTaGCCTTGTGCCAGGGTCCACTTGCCCCCACTTCTAAATAGGTCA +
Preference number: 5 (lower is better)
Translates to: TGDNAARKRERRENI*PCARVHLPPLLNRS
Trigger: TGACCTATTTAGAAGTGGGGGCAAGTGGACCCTGGCACAAGGGCAAATGTTCTCTCTTCTCTCTCTCTTTCTGGCTGCATTATCTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542493.5
CDS CCA 90 bp ACAGGAGTCATACAGTGGGGCCTCTCAGCCACAGAAACTCTTATCTaGAGTGACCAAGGCATCTCTGTAGGGTTTTCAAGTGCTGATACT +
Preference number: 5 (lower is better)
Translates to: TGVIQWGLSATETLI*SDQGISVGFSSADT
Trigger: AGTATCAGCACTTGAAAACCCTACAGAGATGCCTTGGTCACTCCAGATAAGAGTTTCTGTGGCTGAGAGGCCCCACTGTATGACTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540498.1
CDS-3UTR CAA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTAGAATCCGGCCCTTGTaGTGGTCAAACAATGGAGGC +
Preference number: 5 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFRIRPL*WSNNGG
Trigger: GCCTCCATTGTTTGACCACAACAAGGGCCGGATTCT...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAATGGCAAGCCCTGCTTaGGGGAATTCCCTACATGGG +
Preference number: 5 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAMASPA*GNSLHG
Trigger: CCCATGTAGGGAATTCCCCAAAGCAGGGCTTGCCAT...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCCAAACCTTTGCGTTTTaGAGCCCCTGGAATCTTCCT +
Preference number: 5 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFQTFAF*SPWNLP
Trigger: AGGAAGATTCCAGGGGCTCAAAAACGCAAAGGTTTG...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTACAAACCTTTGCGTTTTaGAGCCCCTGGAATCTTCCT +
Preference number: 5 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVQTFAF*SPWNLP
Trigger: AGGAAGATTCCAGGGGCTCAAAAACGCAAAGGTTTG...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCAGAAAAGCTCTCACTTaGCTTGCTTCTTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFRKALT*LASSSL
Trigger: CAGGGAGGAAGAAGCAAGCAAAGTGAGAGCTTTTCT...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAAGAAAAGCTCTCACTTaGCTTGCTTCTTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVRKALT*LASSSL
Trigger: CAGGGAGGAAGAAGCAAGCAAAGTGAGAGCTTTTCT...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp TCCCTAGCTAGGAAGGAGCTCCATCTGTTACCAAAGGAGCCCAGAGGGCAATTCAAAAATTGGTTGCTTTaGTTCCTGTCATTGGGGACT +
Preference number: 5 (lower is better)
Translates to: SLARKELHLLPKEPRGQFKNWLL*FLSLGT
Trigger: AGTCCCCAATGACAGGAACAAAAGCAACCAATTTTT...GAATTGCCCTCTGGGCTCCTTTGGTAACAGATGGAGCTCCTTCCTAGCTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTCCAAAGATGTGTCTCTaGGATTTGCAGGTCACAGTG +
Preference number: 5 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFPKMCL*DLQVTV
Trigger: CACTGTGACCTGCAAATCCAAGAGACACATCTTTGG...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
CDS-3UTR CAA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCATGCCGTCTCCTTTTTaGGTCTTGAAGAAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFMPSPF*VLKKLS
Trigger: AGAGAGCTTCTTCAAGACCAAAAAAGGAGACGGCAT...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTAGTTTTAGATCCTGAGTaGTCAACATTCCAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVVLDPE*STFQGA
Trigger: AGCCCCTTGGAATGTTGACAACTCAGGATCTAAAAC...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCGTTTTAGATCCTGAGTaGTCAACATTCCAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFVLDPE*STFQGA
Trigger: AGCCCCTTGGAATGTTGACAACTCAGGATCTAAAAC...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAAGAATCCGGCCCTTGTaGTGGTCAAACAATGGAGGC +
Preference number: 5 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTRIRPL*WSNNGG
Trigger: GCCTCCATTGTTTGACCACAACAAGGGCCGGATTCT...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCAATGTGTCTCTTGGATTaGCAGGTCACAGTGACAGGA +
Preference number: 5 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAMCLLD*QVTVTG
Trigger: TCCTGTCACTGTGACCTGCAAATCCAAGAGACACAT...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
CDS-3UTR CAA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCACCAAAGATGTGTCTCTaGGATTTGCAGGTCACAGTG +
Preference number: 5 (lower is better)
Translates to: CLFSNALPVCSNKEEGRAPKMCL*DLQVTV
Trigger: CACTGTGACCTGCAAATCCAAGAGACACATCTTTGG...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
CDS-3UTR CAA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTATGCCGTCTCCTTTTTaGGTCTTGAAGAAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFMPSPF*VLKKLS
Trigger: AGAGAGCTTCTTCAAGACCAAAAAAGGAGACGGCAT...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp CCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTATCTTATTTGGCCATTTaGGCAGTCTATCTCAGGCTT +
Preference number: 5 (lower is better)
Translates to: PPEVNSTRVGTLSVSSVVSYLAI*AVYLRL
Trigger: AAGCCTGAGATAGACTGCCAAAATGGCCAAATAAGA...TACCACTGATGAGACAGACAAGGTCCCTACTCTTGTGGAGTTTACTTCTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp GAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCTCTTATTTGGCCATTTaGGCAGTCTATCTCAGGCTT +
Preference number: 5 (lower is better)
Translates to: EPRGQFWMKKSSHFACFFSYLAI*AVYLRL
Trigger: AAGCCTGAGATAGACTGCCAAAATGGCCAAATAAGA...GAAGAAGCAAGCAAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS GCA 90 bp GCAGGTCAAGTGCTGATACTCATTCCGGCACTAATTCGTCAATGTTaGATCTGGATTAGCTGGAGCTCTAAGGAAGAAAGGCAAAAAGTA +
Preference number: 5 (lower is better)
Translates to: AGQVLILIPALIRQC*IWISWSSKEERQKV
Trigger: TACTTTTTGCCTTTCTTCCTTAGAGCTCCAGCTAATCCAGATGCAACATTGACGAATTAGTGCCGGAATGAGTATCAGCACTTGACCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539501.1
CDS-3UTR CAA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACACCAAAGATGTGTCTCTaGGATTTGCAGGTCACAGTG +
Preference number: 5 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTPKMCL*DLQVTV
Trigger: CACTGTGACCTGCAAATCCAAGAGACACATCTTTGG...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
CDS-3UTR CAA 90 bp TGTCTGTTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGGAAGGGCATCTTATTTGGCCATTTaGGCAGTCTATCTCAGGCTT +
Preference number: 5 (lower is better)
Translates to: CLFSNALPVCSNKEEGRASYLAI*AVYLRL
Trigger: AAGCCTGAGATAGACTGCCAAAATGGCCAAATAAGA...TGCCCTTCCTTCCTCTTTATTCGAGCATACTGGCAATGCATTGGAAAACAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTCATAGAGTCTCTTATTaGGCCATTTTGGCAGTCTAT +
Preference number: 5 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFHRVSY*AILAVY
Trigger: ATAGACTGCCAAAATGGCCAAATAAGAGACTCTATG...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp CTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTCTGTTTTCCAATGCATaGCCAGTATGCTCGAATAAA +
Preference number: 5 (lower is better)
Translates to: LLPKEPRGQFWMKKSSHFLFSNA*PVCSNK
Trigger: TTTATTCGAGCATACTGGCAATGCATTGGAAAACAG...AAAGTGAGAGCTTTTCTTCATCCAGAATTGCCCTCTGGGCTCCTTTGGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAAGAAAAGCTCTCACTTaGCTTGCTTCTTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTRKALT*LASSSL
Trigger: CAGGGAGGAAGAAGCAAGCAAAGTGAGAGCTTTTCT...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAATCCTCCGGGATGGGTaGTTTTTCTTTTCTTTAAGC +
Preference number: 5 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTILRDG*FFFSLS
Trigger: GCTTAAAGAAAAGAAAAACAACCCATCCCGGAGGAT...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS-3UTR CAA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACACTGTTTTCCAATGCATaGCCAGTATGCTCGAATAAA +
Preference number: 5 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTLFSNA*PVCSNK
Trigger: TTTATTCGAGCATACTGGCAATGCATTGGAAAACAG...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp TTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACAAAAAATTGGTTGCTTTaGTTCCTGTCATTGGGGACT +
Preference number: 5 (lower is better)
Translates to: FKVNLWNTLGMNQQINLTKNWLL*FLSLGT
Trigger: AGTCCCCAATGACAGGAACAAAAGCAACCAATTTTT...TGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCATGCCGTCTCCTTTTTaGGTCTTGAAGAAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPMPSPF*VLKKLS
Trigger: AGAGAGCTTCTTCAAGACCAAAAAAGGAGACGGCAT...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS-3UTR CAA 90 bp ACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCAAAAATTGGTTGCTTTaGTTCCTGTCATTGGGGACT +
Preference number: 5 (lower is better)
Translates to: TLKLDIKLVASKGLVIFPKNWLL*FLSLGT
Trigger: AGTCCCCAATGACAGGAACAAAAGCAACCAATTTTT...GGGGAATATGACTAACCCTTTTGAAGCTACTAATTTTATGTCGAGCTTTAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS GCA 72 bp AGGGCGCCCTCCCTCTCCTCAGGGACACCTCACAGGTaGGCCTCCGAGCCGCGCGCGCGCGCGCTCCGCACA +
Preference number: 6 (lower is better)
Translates to: RAPSLSSGTPHR*ASEPRARALRT
Trigger: TGTGCGGAGCGCGCGCGCGCGCGGCTCGGAGGCGCACCTGTGAGGTGTCCCTGAGGAGAGGGAGGGCGCCCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392404.7
ENST00000540009.1
CDS GCA 72 bp CCGGCCCCCGCCTCCCTCCGGGAAAGAAAGAAAGACTaGAGCCCGGCCGCCGAGAACTCACTCCAAGTGAGG +
Preference number: 6 (lower is better)
Translates to: PAPASLRERKKD*SPAAENSLQVR
Trigger: CCTCACTTGGAGTGAGTTCTCGGCGGCCGGGCTGCAGTCTTTCTTTCTTTCCCGGAGGGAGGCGGGGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539644.5
CDS GCA 72 bp GTCAAACAATGGAGGCGTCCGGCGGCAGCAGCCTTCTaGGCTGGGTGCGCGAGGGGTTCCTCATCACCTGAG +
Preference number: 6 (lower is better)
Translates to: VKQWRRPAAAAF*AGCARGSSSPE
Trigger: CTCAGGTGATGAGGAACCCCTCGCGCACCCAGCGCAGAAGGCTGCTGCCGCCGGACGCCTCCATTGTTTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000537532.5
ENST00000538932.6
ENST00000539257.5
ENST00000539644.5
ENST00000540009.1
ENST00000541448.5
ENST00000542493.5
ENST00000542820.5
ENST00000543017.5
ENST00000546098.5
CDS CAA 90 bp GACAGCGCCGGCAGCCGGTTTACCTGGGTGAGAATCCGGCCCTTGTaGTGGTCAAACAATGGAGGCGTCCGGCGGCAGCAGCCTTCTGCG +
Preference number: 6 (lower is better)
Translates to: DSAGSRFTWVRIRPL*WSNNGGVRRQQPSA
Trigger: CGCAGAAGGCTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGTAAACCGGCTGCCGGCGCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS GCA 72 bp AAACTGCAGTCGAGTCCTGGAAGGGGTGAGAACGCCTaGGGAGGCGGGAGTCAGAGGGAAGTGGACAGCGCC +
Preference number: 6 (lower is better)
Translates to: KLQSSPGRGENA*GGGSQREVDSA
Trigger: GGCGCTGTCCACTTCCCTCTGACTCCCGCCTCCGCAGGCGTTCTCACCCCTTCCAGGACTCGACTGCAGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS CCA 72 bp CTGGGTGAGAATCCGGCCCTTGTTGTGGTCAAACAATaGAGGCGTCCGGCGGCAGCAGCCTTCTGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: LGENPALVVVKQ*RRPAAAAFCAG
Trigger: CCCAGCGCAGAAGGCTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000537532.5
ENST00000538932.6
ENST00000539257.5
ENST00000539644.5
ENST00000540009.1
ENST00000541448.5
ENST00000542493.5
ENST00000542820.5
ENST00000543017.5
ENST00000546098.5
CDS CAA 72 bp GCCGGCAGCCGGTTTACCTGGGTGAGAATCCGGCCCTaGTTGTGGTCAAACAATGGAGGCGTCCGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: AGSRFTWVRIRP*LWSNNGGVRRQ
Trigger: CTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGTAAACCGGCTGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS CAA 90 bp GTGGACAGCGCCGGCAGCCGGTTTACCTGGGTGAGAATCCGGCCCTaGTTGTGGTCAAACAATGGAGGCGTCCGGCGGCAGCAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: VDSAGSRFTWVRIRP*LWSNNGGVRRQQPS
Trigger: AGAAGGCTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGTAAACCGGCTGCCGGCGCTGTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS CAA 72 bp GGCAGCCGGTTTACCTGGGTGAGAATCCGGCCCTTGTaGTGGTCAAACAATGGAGGCGTCCGGCGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: GSRFTWVRIRPL*WSNNGGVRRQQ
Trigger: CTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGTAAACCGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS CCA 72 bp GCCTTAGGATCCTGGGTGAGAATCCGGCCCTTGTTGTaGTCAAACAATGGAGGCGTCCGGCGGCAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: ALGSWVRIRPLL*SNNGGVRRQQP
Trigger: AGGCTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGATCCTAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392404.7
ENST00000538932.6
ENST00000539257.5
ENST00000542493.5
ENST00000546098.5
CDS CCA 72 bp AGCCGGTTTACCTGGGTGAGAATCCGGCCCTTGTTGTaGTCAAACAATGGAGGCGTCCGGCGGCAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: SRFTWVRIRPLL*SNNGGVRRQQP
Trigger: AGGCTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGTAAACCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS CAA 72 bp GCCTTAGGATCCTGCTGGGTGAGAATCCGGCCCTTGTaGTGGTCAAACAATGGAGGCGTCCGGCGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: ALGSCWVRIRPL*WSNNGGVRRQQ
Trigger: CTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGCAGGATCCTAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337815.9
ENST00000537532.5
ENST00000539644.5
CDS TCA 72 bp GGGAAGTGGACAGCGCCGGCAGCCGGTTTACCTGGGTaGGAATCCGGCCCTTGTTGTGGTCAAACAATGGAG +
Preference number: 6 (lower is better)
Translates to: GKWTAPAAGLPG*ESGPCCGQTME
Trigger: CTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGTAAACCGGCTGCCGGCGCTGTCCACTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS CCA 72 bp TTAGGATCCTGCTGGGTGAGAATCCGGCCCTTGTTGTaGTCAAACAATGGAGGCGTCCGGCGGCAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: LGSCWVRIRPLL*SNNGGVRRQQP
Trigger: AGGCTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGCAGGATCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337815.9
ENST00000537532.5
ENST00000539644.5
CDS CCA 72 bp GATTTGCAGGTCTGGGTGAGAATCCGGCCCTTGTTGTaGTCAAACAATGGAGGCGTCCGGCGGCAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: DLQVWVRIRPLL*SNNGGVRRQQP
Trigger: AGGCTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGACCTGCAAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541448.5
ENST00000543017.5
CDS CAA 72 bp AAGGCCTTAGGATCCTGGGTGAGAATCCGGCCCTTGTaGTGGTCAAACAATGGAGGCGTCCGGCGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: KALGSWVRIRPL*WSNNGGVRRQQ
Trigger: CTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGATCCTAAGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392404.7
ENST00000538932.6
ENST00000539257.5
ENST00000542493.5
ENST00000546098.5
CDS GCA 72 bp CAAGCAGGCTCCTCGGGGTCCAGGTATGGCAAGCCCTaGTTTGGGGAATTCCCTACATGGGTATCATGCCGT +
Preference number: 6 (lower is better)
Translates to: QAGSSGSRYGKP*FGEFPTWVSCR
Trigger: ACGGCATGATACCCATGTAGGGAATTCCCCAAAGCAGGGCTTGCCATACCTGGACCCCGAGGAGCCTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000537532.5
ENST00000538932.6
ENST00000539501.1
ENST00000539644.5
ENST00000541448.5
ENST00000542493.5
ENST00000543017.5
ENST00000546098.5
CDS CCA 72 bp CAGAGGGAAGTGGACAGCGCCGGCAGCCGGTTTACCTaGGTGAGAATCCGGCCCTTGTTGTGGTCAAACAAT +
Preference number: 6 (lower is better)
Translates to: QREVDSAGSRFT*VRIRPLLWSNN
Trigger: ATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGTAAACCGGCTGCCGGCGCTGTCCACTTCCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS CCA 72 bp ATGTGGCGGAGAGATGGATCCGGACGGGAAAATGTCTaGGAGGGGGTATACGGAGTTCATGAGAAGCCGGGG +
Preference number: 6 (lower is better)
Translates to: MWRRDGSGRENV*EGVYGVHEKPG
Trigger: CCCCGGCTTCTCATGAACTCCGTATACCCCCTCCCAGACATTTTCCCGTCCGGATCCATCTCTCCGCCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS CAA 72 bp ACAAAGGCCTTAGGATCCTGGGTGAGAATCCGGCCCTaGTTGTGGTCAAACAATGGAGGCGTCCGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: TKALGSWVRIRP*LWSNNGGVRRQ
Trigger: CTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGGATCCTAAGGCCTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392404.7
ENST00000538932.6
ENST00000539257.5
ENST00000542493.5
ENST00000546098.5
CDS CAA 72 bp TTGGATTTGCAGGTCTGGGTGAGAATCCGGCCCTTGTaGTGGTCAAACAATGGAGGCGTCCGGCGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: LDLQVWVRIRPL*WSNNGGVRRQQ
Trigger: CTGCTGCCGCCGGACGCCTCCATTGTTTGACCACAACAAGGGCCGGATTCTCACCCAGACCTGCAAATCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541448.5
ENST00000543017.5
CDS CAA 90 bp AGGATGAGATACTGCTGGCTGGTCTCGAGCCCCTGCAGTTGCCCCTaGAAGAGTCAGTTTGGCATTCTGCCTCCTGCACATCAGACAGGA +
Preference number: 6 (lower is better)
Translates to: RMRYCWLVSSPCSCP*KSQFGILPPAHQTG
Trigger: TCCTGTCTGATGTGCAGGAGGCAGAATGCCAAACTGACTCTTCAAGGGGCAACTGCAGGGGCTCGAGACCAGCCAGCAGTATCTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000537532.5
ENST00000538932.6
ENST00000539501.1
ENST00000539644.5
ENST00000541448.5
ENST00000543017.5
CDS GCA 72 bp ATGAGATACTGCTGGCTGGTCTCGAGCCCCTGCAGTTaGCCCTTGAAGAGTCAGTTTGGCATTCTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: MRYCWLVSSPCS*PLKSQFGILPP
Trigger: AGGAGGCAGAATGCCAAACTGACTCTTCAAGGGGCAACTGCAGGGGCTCGAGACCAGCCAGCAGTATCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000537532.5
ENST00000538932.6
ENST00000539501.1
ENST00000539644.5
ENST00000541448.5
ENST00000543017.5
CDS GCA 72 bp CGAAGGATGAGATACTGCTGGCTGGTCTCGAGCCCCTaGAGTTGCCCCTTGAAGAGTCAGTTTGGCATTCTG +
Preference number: 6 (lower is better)
Translates to: RRMRYCWLVSSP*SCPLKSQFGIL
Trigger: CAGAATGCCAAACTGACTCTTCAAGGGGCAACTGCAGGGGCTCGAGACCAGCCAGCAGTATCTCATCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000537532.5
ENST00000538932.6
ENST00000539501.1
ENST00000539644.5
ENST00000541448.5
ENST00000543017.5
CDS CAA 90 bp GTATCGAAGGATGAGATACTGCTGGCTGGTCTCGAGCCCCTGCAGTaGCCCCTTGAAGAGTCAGTTTGGCATTCTGCCTCCTGCACATCA +
Preference number: 6 (lower is better)
Translates to: VSKDEILLAGLEPLQ*PLEESVWHSASCTS
Trigger: TGATGTGCAGGAGGCAGAATGCCAAACTGACTCTTCAAGGGGCAACTGCAGGGGCTCGAGACCAGCCAGCAGTATCTCATCCTTCGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000537532.5
ENST00000538932.6
ENST00000539501.1
ENST00000539644.5
ENST00000541448.5
ENST00000543017.5
CDS TCA 72 bp TTCACAAAGGAGCTGAGTTCTGGGGGAAATGAGAGGTaGTGTGGCGGAGAGATGGATCCGGACGGGAAAATG +
Preference number: 6 (lower is better)
Translates to: FTKELSSGGNER*CGGEMDPDGKM
Trigger: CATTTTCCCGTCCGGATCCATCTCTCCGCCACATCACCTCTCATTTCCCCCAGAACTCAGCTCCTTTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540009.1
ENST00000542820.5
CDS GCA 72 bp TTGCCCCTTGAAGAGTCAGTTTGGCATTCTGCCTCCTaGACATCAGACAGGAAAGCCTTTCCAGCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: LPLEESVWHSAS*TSDRKAFPASR
Trigger: CCTGCTTGCTGGAAAGGCTTTCCTGTCTGATGTGCAGGAGGCAGAATGCCAAACTGACTCTTCAAGGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000537532.5
ENST00000538932.6
ENST00000539501.1
ENST00000539644.5
ENST00000541448.5
ENST00000543017.5
ENST00000546098.5
CDS CAA 72 bp GGGAAGGCGATGGTTCTAGCATGTTTGAGTGGAGCTTaGACAGAGGCATTACAGCTGATGAGCCAGGGGCAT +
Preference number: 6 (lower is better)
Translates to: GKAMVLACLSGA*TEALQLMSQGH
Trigger: ATGCCCCTGGCTCATCAGCTGTAATGCCTCTGTCAAAGCTCCACTCAAACATGCTAGAACCATCGCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540498.1
CDS GCA 72 bp AATGCAGCCAGAAAGAGAGAGAGAAGAGAGAACATTTaGCCTTGTGCCAGGGTCCACTTGCCCCCACTTCTA +
Preference number: 6 (lower is better)
Translates to: NAARKRERRENI*PCARVHLPPLL
Trigger: TAGAAGTGGGGGCAAGTGGACCCTGGCACAAGGGCAAATGTTCTCTCTTCTCTCTCTCTTTCTGGCTGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542493.5
CDS CCA 72 bp AGTGAAGTCCAGCAGGCAGAAACAGGAGTCATACAGTaGGGCCTCTCAGCCACAGAAACTCTTATCTGGAGT +
Preference number: 6 (lower is better)
Translates to: SEVQQAETGVIQ*GLSATETLIWS
Trigger: ACTCCAGATAAGAGTTTCTGTGGCTGAGAGGCCCCACTGTATGACTCCTGTTTCTGCCTGCTGGACTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540498.1
CDS CAA 72 bp AGAAGAGAGAACATTTGCCCTTGTGCCAGGGTCCACTaGCCCCCACTTCTAAATAGGTCAGTCACCACAGTG +
Preference number: 6 (lower is better)
Translates to: RRENICPCARVH*PPLLNRSVTTV
Trigger: CACTGTGGTGACTGACCTATTTAGAAGTGGGGGCAAGTGGACCCTGGCACAAGGGCAAATGTTCTCTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542493.5
CDS CAA 90 bp AAGAGAGAGAGAAGAGAGAACATTTGCCCTTGTGCCAGGGTCCACTaGCCCCCACTTCTAAATAGGTCAGTCACCACAGTGACAGGATCA +
Preference number: 6 (lower is better)
Translates to: KRERRENICPCARVH*PPLLNRSVTTVTGS
Trigger: TGATCCTGTCACTGTGGTGACTGACCTATTTAGAAGTGGGGGCAAGTGGACCCTGGCACAAGGGCAAATGTTCTCTCTTCTCTCTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542493.5
CDS CCA 72 bp TGTCTCTTGGATTTGCAGGTCACTCACGATAAAGACTaGCCGAGGTTACCCAAATCAGCACAGGAGATAATG +
Preference number: 6 (lower is better)
Translates to: CLLDLQVTHDKD*PRLPKSAQEIM
Trigger: CATTATCTCCTGTGCTGATTTGGGTAACCTCGGCCAGTCTTTATCGTGAGTGACCTGCAAATCCAAGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542493.5
CDS CAA 72 bp TTGAAGAAGCTCTCTTATCTTCCAAAGATGTGTCTCTaGGATTTGCAGGTCTGGGTGAGAATCCGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: LKKLSYLPKMCL*DLQVWVRIRPL
Trigger: CAAGGGCCGGATTCTCACCCAGACCTGCAAATCCAAGAGACACATCTTTGGAAGATAAGAGAGCTTCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541448.5
ENST00000543017.5
CDS GCA 72 bp GTGCTGATACTCATTCCGGCACTAATTCGTCAATGTTaGATCTGGATTAGCTGGAGCTCTAAGGAAGAAAGG +
Preference number: 6 (lower is better)
Translates to: VLILIPALIRQC*IWISWSSKEER
Trigger: CCTTTCTTCCTTAGAGCTCCAGCTAATCCAGATGCAACATTGACGAATTAGTGCCGGAATGAGTATCAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539501.1
CDS CAA 72 bp TTGAAGAAGCTCTCTTATCTTCCAAAGATGTGTCTCTaGGATTTGCAGGTCACTCACGATAAAGACTGGCCG +
Preference number: 6 (lower is better)
Translates to: LKKLSYLPKMCL*DLQVTHDKDWP
Trigger: CGGCCAGTCTTTATCGTGAGTGACCTGCAAATCCAAGAGACACATCTTTGGAAGATAAGAGAGCTTCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542493.5
CDS CAA 72 bp TTGAAGAAGCTCTCTTATCTTCCAAAGATGTGTCTCTaGGATTTGCAGGTCACAGTGACAGGATCAAAACCC +
Preference number: 6 (lower is better)
Translates to: LKKLSYLPKMCL*DLQVTVTGSKP
Trigger: GGGTTTTGATCCTGTCACTGTGACCTGCAAATCCAAGAGACACATCTTTGGAAGATAAGAGAGCTTCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000537532.5
ENST00000538932.6
ENST00000546098.5
CDS GCA 72 bp TTTTCCCTGCCTGTCTTTCTACGGAAGGTTTCTTCCTaGATAGTGTTCCTCACTCAGTATTATTATCGATTA +
Preference number: 6 (lower is better)
Translates to: FSLPVFLRKVSS*IVFLTQYYYRL
Trigger: TAATCGATAATAATACTGAGTGAGGAACACTATGCAGGAAGAAACCTTCCGTAGAAAGACAGGCAGGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS CAA 72 bp AACTCATTAACACAGAACTTTGTTTTAGATCCTGAGTaGTCAACATTCCAAGGGGCTCTCAAAGTGCAAACC +
Preference number: 6 (lower is better)
Translates to: NSLTQNFVLDPE*STFQGALKVQT
Trigger: GGTTTGCACTTTGAGAGCCCCTTGGAATGTTGACAACTCAGGATCTAAAACAAAGTTCTGTGTTAATGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS CAA 90 bp GAATTCTGTAACTCATTAACACAGAACTTTGTTTTAGATCCTGAGTaGTCAACATTCCAAGGGGCTCTCAAAGTGCAAACCTTTGCGTTT +
Preference number: 6 (lower is better)
Translates to: EFCNSLTQNFVLDPE*STFQGALKVQTFAF
Trigger: AAACGCAAAGGTTTGCACTTTGAGAGCCCCTTGGAATGTTGACAACTCAGGATCTAAAACAAAGTTCTGTGTTAATGAGTTACAGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS CCA 72 bp CAGTTACAAGACTGTTATTTCATAGAGTCTCTTATTTaGCCATTTTGGCAGTCTATCTCAGGCTTGCTCTAT +
Preference number: 6 (lower is better)
Translates to: QLQDCYFIESLI*PFWQSISGLLY
Trigger: ATAGAGCAAGCCTGAGATAGACTGCCAAAATGGCCAAATAAGAGACTCTATGAAATAACAGTCTTGTAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS CCA 72 bp AAAGATCTGCTCTCTCAGAGAAAAATTCCCTACACATaGGGCACTTGTAGATCATTTTTCCTATTTGGTATC +
Preference number: 6 (lower is better)
Translates to: KDLLSQRKIPYT*GTCRSFFLFGI
Trigger: GATACCAAATAGGAAAAATGATCTACAAGTGCCCCATGTGTAGGGAATTTTTCTCTGAGAGAGCAGATCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS CAA 72 bp AGACTGTTATTTCATAGAGTCTCTTATTTGGCCATTTaGGCAGTCTATCTCAGGCTTGCTCTATTAGGTAAG +
Preference number: 6 (lower is better)
Translates to: RLLFHRVSYLAI*AVYLRLALLGK
Trigger: CTTACCTAATAGAGCAAGCCTGAGATAGACTGCCAAAATGGCCAAATAAGAGACTCTATGAAATAACAGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS CAA 72 bp ACAGTTACAAGACTGTTATTTCATAGAGTCTCTTATTaGGCCATTTTGGCAGTCTATCTCAGGCTTGCTCTA +
Preference number: 6 (lower is better)
Translates to: TVTRLLFHRVSY*AILAVYLRLAL
Trigger: TAGAGCAAGCCTGAGATAGACTGCCAAAATGGCCAAATAAGAGACTCTATGAAATAACAGTCTTGTAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS CAA 90 bp ACAGTTACAAGACTGTTATTTCATAGAGTCTCTTATTTGGCCATTTaGGCAGTCTATCTCAGGCTTGCTCTATTAGGTAAGTTTAAGGTC +
Preference number: 6 (lower is better)
Translates to: TVTRLLFHRVSYLAI*AVYLRLALLGKFKV
Trigger: GACCTTAAACTTACCTAATAGAGCAAGCCTGAGATAGACTGCCAAAATGGCCAAATAAGAGACTCTATGAAATAACAGTCTTGTAACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5
CDS CAA 90 bp ATGATTACTACAGTTACAAGACTGTTATTTCATAGAGTCTCTTATTaGGCCATTTTGGCAGTCTATCTCAGGCTTGCTCTATTAGGTAAG +
Preference number: 6 (lower is better)
Translates to: MITTVTRLLFHRVSY*AILAVYLRLALLGK
Trigger: CTTACCTAATAGAGCAAGCCTGAGATAGACTGCCAAAATGGCCAAATAAGAGACTCTATGAAATAACAGTCTTGTAACTGTAGTAATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337815.9
ENST00000392404.7
ENST00000538932.6
ENST00000539644.5