Pregenerated sensors for ZNF658 (Homo sapiens)
Ensembl gene IDs: ENSG00000274349Ensembl transcript IDs: ENST00000612867.4, ENST00000619925.4, ENST00000622180.4
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | AATAGACATTTATGGCAGATGGAGCACTGTACATCAGTGGGGAGACATAAATACATGACTCCCTCTTCATaGAGCCGTTCCTTTGGGATT | + |
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Preference number: 3 (lower is better) Translates to: NRHLWQMEHCTSVGRHKYMTPSS*SRSFGI Trigger: AATCCCAAAGGAACGGCTCAATGAAGAGGGAGTCAT...GTATTTATGTCTCCCCACTGATGTACAGTGCTCCATCTGCCATAAATGTCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622180.4 |
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| CDS-3UTR TCA 90 bp | TCCCTCTTCATTGAGCCGTTCCTTTGGGATTCAGGCACAGCTGACCAGCATTTATCCTATTCATGTGCCTaGGAGGTGAAGCCAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SLFIEPFLWDSGTADQHLSYSCA*EVKPAG Trigger: TCCAGCTGGCTTCACCTCTCAGGCACATGAATAGGA...TAAATGCTGGTCAGCTGTGCCTGAATCCCAAAGGAACGGCTCAATGAAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622180.4 |
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| CDS-3UTR TCA 90 bp | AATAGACATTTATGGCAGATGGAGCACTGTACATCAGTGGGGAGACATAAATACCATGTGCCTGAGAGGTaGAGCCAGCTGGACTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: NRHLWQMEHCTSVGRHKYHVPER*SQLDFL Trigger: CAGGAAGTCCAGCTGGCTTCACCTCTCAGGCACATG...GTATTTATGTCTCCCCACTGATGTACAGTGCTCCATCTGCCATAAATGTCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622180.4 |
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| CDS-3UTR TCA 90 bp | GGGAGACATAAATACATAGGACTGGGGCACTTGCTCTTCCAAATTCTTCATGACAATGCAATATCCCACTaGGATGAGGTGGCTGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: GRHKYIGLGHLLFQILHDNAISH*DEVAVV Trigger: AACTACAGCCACCTCATCTCAGTGGGATATTGCATT...GTCATGAAGAATTTGGAAGAGCAAGTGCCCCAGTCCTATGTATTTATGTCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622180.4 |
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| CDS-3UTR CCA 90 bp | CTCTTCATTGAGCCGTTCCTTTGGGATTCAGGCACAGCTGACCAGCATTTAACAAACTTTAAAATACCCTaGGTACCTCTGGTTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LFIEPFLWDSGTADQHLTNFKIP*VPLVQE Trigger: TTCCTGAACCAGAGGTACCCAGGGTATTTTAAAGTT...TGTTAAATGCTGGTCAGCTGTGCCTGAATCCCAAAGGAACGGCTCAATGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622180.4 |
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| CDS-3UTR CCA 90 bp | GGGAGACATAAATACATAGGACTGGGGCACTTGCTCTTCCAAATTCTTCATGACGACATTTATGGCAGATaGAGCACTGTACATCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: GRHKYIGLGHLLFQILHDDIYGR*STVHQW Trigger: CCACTGATGTACAGTGCTCCATCTGCCATAAATGTC...GTCATGAAGAATTTGGAAGAGCAAGTGCCCCAGTCCTATGTATTTATGTCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622180.4 |
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| CDS-3UTR TCA 90 bp | GGGAGACATAAATACATAGGACTGGGGCACTTGCTCTTCCAAATTCTTCATGACAATGACACTGATGCCTaGGACATGTTCATTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: GRHKYIGLGHLLFQILHDNDTDA*DMFIFC Trigger: GCAGAAAATGAACATGTCTCAGGCATCAGTGTCATT...GTCATGAAGAATTTGGAAGAGCAAGTGCCCCAGTCCTATGTATTTATGTCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622180.4 |
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| CDS-3UTR TCA 90 bp | GTGGGGAGACATAAATACATAGGACTGGGGCACTTGCTCTTCCAAATTCTTCATGGATTCAGGCACAGCTaGCCAGCATTTAACATTAAA | + |
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Preference number: 4 (lower is better) Translates to: VGRHKYIGLGHLLFQILHGFRHS*PAFNIK Trigger: TTTAATGTTAAATGCTGGTCAGCTGTGCCTGAATCC...ATGAAGAATTTGGAAGAGCAAGTGCCCCAGTCCTATGTATTTATGTCTCCCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622180.4 |
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| CDS-3UTR CAA 90 bp | GACTCCCTCTTCATTGAGCCGTTCCTTTGGGATTCAGGCACAGCTGACCAGCATATGACTCCCTCTTCATaGAGCCGTTCCTTTGGGATT | + |
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Preference number: 5 (lower is better) Translates to: DSLFIEPFLWDSGTADQHMTPSS*SRSFGI Trigger: AATCCCAAAGGAACGGCTCAATGAAGAGGGAGTCAT...ATGCTGGTCAGCTGTGCCTGAATCCCAAAGGAACGGCTCAATGAAGAGGGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622180.4 |
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| CDS CAA 90 bp | CTCTCAGTTCTTACAGAGATGGTCCCTGACATGAGATGGTTCGACTaGATAATGGTTTTACTGCGACATAACCCCACTGTAATCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LSVLTEMVPDMRWFD*IMVLLRHNPTVIKE Trigger: CTCCTTGATTACAGTGGGGTTATGTCGCAGTAAAACCATTATCAAGTCGAACCATCTCATGTCAGGGACCATCTCTGTAAGAACTGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000612867.4 ENST00000619925.4 ENST00000622180.4 |
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