RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF652 (Homo sapiens)

Ensembl gene IDs: ENSG00000198740

Ensembl transcript IDs: ENST00000362063.6, ENST00000430262.3, ENST00000508237.5, ENST00000513488.2

Found 484 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGACAGAGAGGGAGCACACACAGTTTCTAACCTGGAGTGCCCGTTaGACTGGTCAGGAGGAAGTGCCTGACCTAGAGGACTTGTTCCCT +
Preference number: 1 (lower is better)
Translates to: LTEREHTQFLTWSAR*TGQEEVPDLEDLFP
Trigger: AGGGAACAAGTCCTCTAGGTCAGGCACTTCCTCCTGACCAGTGCAACGGGCACTCCAGGTTAGAAACTGTGTGTGCTCCCTCTCTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR CCA 90 bp ACAAGTAGACACCTCTCTGTGCCTGGTATTGCTCAGGTTCAGACTTaGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGAAGGCCA +
Preference number: 1 (lower is better)
Translates to: TSRHLSVPGIAQVQT*LGVRWPGRNQLRRP
Trigger: TGGCCTTCTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCAATACCAGGCACAGAGAGGTGTCTACTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR GCA 90 bp GAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTaGTCTTGTTCCTCCTATAGATGTGATGGTGGTGGCCTGCGGAGG +
Preference number: 1 (lower is better)
Translates to: EGEKHFLTHTPEFPQ*SCSSYRCDGGGLRR
Trigger: CCTCCGCAGGCCACCACCATCACATCTATAGGAGGAACAAGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR GCA 90 bp ACCTACCTGTCACCTCCCCAACCCAAAGACTCCTCTAAACTTCTTTaGAGCATGACAGCTGCCTGCCCTACACTGAGTCTACTTGACCTT +
Preference number: 1 (lower is better)
Translates to: TYLSPPQPKDSSKLL*SMTAACPTLSLLDL
Trigger: AAGGTCAAGTAGACTCAGTGTAGGGCAGGCAGCTGTCATGCTGCAAAGAAGTTTAGAGGAGTCTTTGGGTTGGGGAGGTGACAGGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR TCA 90 bp GGGAGTAAAAAGACCTGTCCACAGCACAAACTTCCACTCTGGCTGTaGAGGACTAGCCAATTGCTAAATGTTTCATCACGGAGGTGCTCG +
Preference number: 1 (lower is better)
Translates to: GSKKTCPQHKLPLWL*RTSQLLNVSSRRCS
Trigger: CGAGCACCTCCGTGATGAAACATTTAGCAATTGGCTAGTCCTTCACAGCCAGAGTGGAAGTTTGTGCTGTGGACAGGTCTTTTTACTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR TCA 90 bp CAGCCTTCCCGATTAGTACAAAGGAAACCAGGCCTATCCCCTCTTTaGGGAGAAGTCTGGGATATAAAAGCAAGCATACCTCATCAGCTG +
Preference number: 1 (lower is better)
Translates to: QPSRLVQRKPGLSPL*GEVWDIKASIPHQL
Trigger: CAGCTGATGAGGTATGCTTGCTTTTATATCCCAGACTTCTCCTCAAAGAGGGGATAGGCCTGGTTTCCTTTGTACTAATCGGGAAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR TCA 90 bp GCCAAGCAGAACATGGAGGACAGGAGCACATTAGGGAGCCTCTCTTaGGTGTTAAGCAGAGATGTCAAAACTACCAAGTATTTACGCCAA +
Preference number: 1 (lower is better)
Translates to: AKQNMEDRSTLGSLS*VLSRDVKTTKYLRQ
Trigger: TTGGCGTAAATACTTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTCCTGTCCTCCATGTTCTGCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR TCA 90 bp GGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGAGACTaGAGCTGCAGTGACATCAGAGGATTAGAGAGAGGTGCATACTCA +
Preference number: 1 (lower is better)
Translates to: GCWHFEGTQKQSERD*SCSDIRGLERGAYS
Trigger: TGAGTATGCACCTCTCTCTAATCCTCTGATGTCACTGCAGCTTCAGTCTCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR GCA 90 bp CTGTGGAGGGAGAGGGAGACAACCACTAAAGATATAACAGTCATATaGAAGGAATTAACTTTCCTTATTGGCTTGGGTACCTGGGTGCTC +
Preference number: 1 (lower is better)
Translates to: LWRERETTTKDITVI*KELTFLIGLGTWVL
Trigger: GAGCACCCAGGTACCCAAGCCAATAAGGAAAGTTAATTCCTTGCATATGACTGTTATATCTTTAGTGGTTGTCTCCCTCTCCCTCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR TCA 90 bp GGAAGCTGTGTTCATTCAGAGGAGCTGGATATTCCAGAAACAACTTaGCTCTTTGGCACATCCAGTACAGACACAGGCTCTTTAGTTGAT +
Preference number: 1 (lower is better)
Translates to: GSCVHSEELDIPETT*LFGTSSTDTGSLVD
Trigger: ATCAACTAAAGAGCCTGTGTCTGTACTGGATGTGCCAAAGAGTCAAGTTGTTTCTGGAATATCCAGCTCCTCTGAATGAACACAGCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR TCA 90 bp GGGGGTAATATTTACTGTCGTCTTTTCCCTTCCCAGGTTGATTACTaGCCTGTTTGTTGTGAAGATGCTGCTGCAATAAGCACAAACAGA +
Preference number: 1 (lower is better)
Translates to: GGNIYCRLFPSQVDY*PVCCEDAAAISTNR
Trigger: TCTGTTTGTGCTTATTGCAGCAGCATCTTCACAACAAACAGGTCAGTAATCAACCTGGGAAGGGAAAAGACGACAGTAAATATTACCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR TCA 90 bp ACTGTGAAACATGGCCAGCTCAACTCTGTAGCTGGCACCAAAAGCTaGAAAGAATTCCTTACCATACACAGTGATACAATTAATGCTCTG +
Preference number: 1 (lower is better)
Translates to: TVKHGQLNSVAGTKS*KEFLTIHSDTINAL
Trigger: CAGAGCATTAATTGTATCACTGTGTATGGTAAGGAATTCTTTTCAGCTTTTGGTGCCAGCTACAGAGTTGAGCTGGCCATGTTTCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR GCA 90 bp ACTACCAAGTATTTACGCCAAATCCTGAAAGCAAAACCTCATTTTTaGAGTAACCTGGTCTGGAGACCCTCTCAGATACATCTAGTCTCT +
Preference number: 1 (lower is better)
Translates to: TTKYLRQILKAKPHF*SNLVWRPSQIHLVS
Trigger: AGAGACTAGATGTATCTGAGAGGGTCTCCAGACCAGGTTACTGCAAAAATGAGGTTTTGCTTTCAGGATTTGGCGTAAATACTTGGTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR CCA 90 bp TTTAGAAGGTTGAGAATAAAGCTAACGTACTTTATTGCTCCCTTGTaGACAAAGCCAGAACTGCTGATGGAAAACAGTCACACAGCCCAT +
Preference number: 1 (lower is better)
Translates to: FRRLRIKLTYFIAPL*TKPELLMENSHTAH
Trigger: ATGGGCTGTGTGACTGTTTTCCATCAGCAGTTCTGGCTTTGTCCACAAGGGAGCAATAAAGTACGTTAGCTTTATTCTCAACCTTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR GCA 90 bp TCTTTCCTGTTGCCAGACAGGAAAGATGGAGAATGTATTAACAGCTaGCTTCTTAGATACCCACCTTGTGTGGTTATTAGTCTTAAAAAC +
Preference number: 1 (lower is better)
Translates to: SFLLPDRKDGECINS*LLRYPPCVVISLKN
Trigger: GTTTTTAAGACTAATAACCACACAAGGTGGGTATCTAAGAAGGCAGCTGTTAATACATTCTCCATCTTTCCTGTCTGGCAACAGGAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR GCA 90 bp GTTAGGAGCTCTAGCAGAATAAAATACTTCCCACCAACTTTCAAATaGAATGAAACAGTCTTGAGTCCTGTACAGGATGTCTATCATGCT +
Preference number: 1 (lower is better)
Translates to: VRSSSRIKYFPPTFK*NETVLSPVQDVYHA
Trigger: AGCATGATAGACATCCTGTACAGGACTCAAGACTGTTTCATTGCATTTGAAAGTTGGTGGGAAGTATTTTATTCTGCTAGAGCTCCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR CCA 90 bp GCTGAAAAGAATTCCTTACCATACACAGTGATACAATTAATGCTCTaGATTAATCTCACAGCCTTCCCGATTAGTACAAAGGAAACCAGG +
Preference number: 1 (lower is better)
Translates to: AEKNSLPYTVIQLML*INLTAFPISTKETR
Trigger: CCTGGTTTCCTTTGTACTAATCGGGAAGGCTGTGAGATTAATCCAGAGCATTAATTGTATCACTGTGTATGGTAAGGAATTCTTTTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR GCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGCACCGACTCCCTCTGTaGACGCTCACACATGGGGAC +
Preference number: 2 (lower is better)
Translates to: RRGTLPHSGLDISTPATWHRLPL*TLTHGD
Trigger: GTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTG...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR TCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGGGGGTGGGAGGTAAGTaGTTTAGCCTGGGAACTCAG +
Preference number: 2 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWGVGGK*FSLGTQ
Trigger: CTGAGTTCCCAGGCTAAATCACTTACCTCCCACCCC...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR CAA 90 bp AGCATGACAGCTGCCTGCCCTACACTGAGTCTACTTGACCTTCAATaGCGTCTCCGCAGAGAGGTAGGAGAGGGACACTGCCCCATTCTG +
Preference number: 2 (lower is better)
Translates to: SMTAACPTLSLLDLQ*RLRREVGEGHCPIL
Trigger: CAGAATGGGGCAGTGTCCCTCTCCTACCTCTCTGCGGAGACGCAATTGAAGGTCAAGTAGACTCAGTGTAGGGCAGGCAGCTGTCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR TCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGCATGCAAGCTTTAGGTaGCTTCCCTGGAAAAGGCCC +
Preference number: 2 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKHASFR*LPWKRP
Trigger: GGGCCTTTTCCAGGGAAGTCACCTAAAGCTTGCATG...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGCTCTCCGTTGTTTTATaGCCTGGGACCCTCATCAGC +
Preference number: 2 (lower is better)
Translates to: RRGTLPHSGLDISTPATWLSVVL*PGTLIS
Trigger: GCTGATGAGGGTCCCAGGCCATAAAACAACGGAGAG...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508237.5
3UTR-3UTR TCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGGATCTGTTGATTCAGTaGCACTGGCGAAGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: RRGTLPHSGLDISTPATWDLLIQ*HWRSSW
Trigger: CCAAGAGCTTCGCCAGTGTCACTGAATCAACAGATC...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR GCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTCCAAGATCACGCCACTaGACTCCAGCCCAGGCAACA +
Preference number: 2 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICPRSRH*TPAQAT
Trigger: TGTTGCCTGGGCTGGAGTGCAGTGGCGTGATCTTGG...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTGCGACTGGAAAGCTATaGGAACACTTCTCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICATGKL*EHFSGA
Trigger: TGCCCCTGAGAAGTGTTCCCATAGCTTTCCAGTCGC...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR TCA 90 bp AAGAATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGAAGCACTTTCGGAGGCTaGGGTGGGCGGATCACAAGG +
Preference number: 2 (lower is better)
Translates to: KNVPGCWHFEGTQKQSERSTFGG*GGRITR
Trigger: CCTTGTGATCCGCCCACCTCAGCCTCCGAAAGTGCT...TCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR TCA 90 bp AGAGGATCTCTGGTTTGCTTTATCGAGGTAGTGTCCAGGGTTGGAAGGTCATCAAGGCGGAGGAGAGTCTaGGAACTAAGGAAATGCTCA +
Preference number: 2 (lower is better)
Translates to: RGSLVCFIEVVSRVGRSSRRRRV*ELRKCS
Trigger: TGAGCATTTCCTTAGTTCTCAGACTCTCCTCCGCCT...TGATGACCTTCCAACCCTGGACACTACCTCGATAAAGCAAACCAGAGATCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR TCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTTTCCCTTGGATCTGTTaGTTCAGTGACACTGGCGAA +
Preference number: 2 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICFPWIC*FSDTGE
Trigger: TTCGCCAGTGTCACTGAATCAACAGATCCAAGGGAA...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR GCA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGCACCGACTCCCTCTGTaGACGCTCACACATGGGGAC +
Preference number: 2 (lower is better)
Translates to: SVINTLALLFSLSYNKLLHRLPL*TLTHGD
Trigger: GTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTG...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAGTGTACGGAAGGGAGTaGGCACATGGGAACAGGGCA +
Preference number: 2 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIVYGRE*AHGNRA
Trigger: TGCCCTGTTCCCATGTGCCCACTCCCTTCCGTACAC...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACACAAAGGCGCCCCTATaGGAAGGTCCTGGCTTTCAA +
Preference number: 2 (lower is better)
Translates to: IGALRQVTDREGAHTVSNTKAPL*EGPGFQ
Trigger: TTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTTGT...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR TCA 90 bp AGAGGATCTCTGGTTTGCTTTATCGAGGTAGTGTCCAGGGTTGGAAGGTCATCATTCCCTTGGATCTGTTaGTTCAGTGACACTGGCGAA +
Preference number: 2 (lower is better)
Translates to: RGSLVCFIEVVSRVGRSSFPWIC*FSDTGE
Trigger: TTCGCCAGTGTCACTGAATCAACAGATCCAAGGGAA...TGATGACCTTCCAACCCTGGACACTACCTCGATAAAGCAAACCAGAGATCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR TCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACGGCCTATCCCCTCTTTaGGGAGAAGTCTGGGATATA +
Preference number: 2 (lower is better)
Translates to: IGALRQVTDREGAHTVSNGLSPL*GEVWDI
Trigger: TATATCCCAGACTTCTCCTCAAAGAGGGGATAGGCC...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR TCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTGTGACTGAGATGAAATaGTCTCCACTACTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICVTEMK*SPLLPP
Trigger: AGGAGGAAGTAGTGGAGATCATTTCATCTCAGTCAC...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR GCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAACCAAGATCACGCCACTaGACTCCAGCCCAGGCAACA +
Preference number: 2 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKPRSRH*TPAQAT
Trigger: TGTTGCCTGGGCTGGAGTGCAGTGGCGTGATCTTGG...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTATTTTTGCAGTAACCTaGTCTGGAGACCCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICIFAVT*SGDPLR
Trigger: TCTGAGAGGGTCTCCAGACCAGGTTACTGCAAAAAT...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACGCTGTCTCAAGGATGTaGTTCCTCCAAGTGACAAGC +
Preference number: 2 (lower is better)
Translates to: IGALRQVTDREGAHTVSNAVSRM*FLQVTS
Trigger: GCTTGTCACTTGGAGGAACCACATCCTTGAGACAGC...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR CCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACCCTATGGGAAGGTCCTaGCTTTCAATCTGGGGATCA +
Preference number: 2 (lower is better)
Translates to: IGALRQVTDREGAHTVSNPMGRS*LSIWGS
Trigger: TGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGG...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR CAA 90 bp ACAGCCTTCCCGATTAGTACAAAGGAAACCAGGCCTATCCCCTCTTaGAGGAGAAGTCTGGGATATAAAAGCAAGCATACCTCATCAGCT +
Preference number: 2 (lower is better)
Translates to: TAFPISTKETRPIPS*RRSLGYKSKHTSSA
Trigger: AGCTGATGAGGTATGCTTGCTTTTATATCCCAGACTTCTCCTCAAAGAGGGGATAGGCCTGGTTTCCTTTGTACTAATCGGGAAGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR CAA 90 bp AGCCAAGCAGAACATGGAGGACAGGAGCACATTAGGGAGCCTCTCTaGAGTGTTAAGCAGAGATGTCAAAACTACCAAGTATTTACGCCA +
Preference number: 2 (lower is better)
Translates to: SQAEHGGQEHIREPL*SVKQRCQNYQVFTP
Trigger: TGGCGTAAATACTTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTCCTGTCCTCCATGTTCTGCTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR TCA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTAGCACTTTCGGAGGCTaGGGTGGGCGGATCACAAGG +
Preference number: 2 (lower is better)
Translates to: HYILSSFPEDHKSQVKESSTFGG*GGRITR
Trigger: CCTTGTGATCCGCCCACCTCAGCCTCCGAAAGTGCT...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR TCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTTGTACAGATAAGGGCTaGGAACTCAAACTTCTCCAT +
Preference number: 2 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICCTDKG*ELKLLH
Trigger: ATGGAGAAGTTTGAGTTCTCAGCCCTTATCTGTACA...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR TCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACTCTCACCAGAGAAGCTaGCGTAGTGTGAAAGTAACC +
Preference number: 2 (lower is better)
Translates to: IGALRQVTDREGAHTVSNSHQRS*RSVKVT
Trigger: GGTTACTTTCACACTACGTCAGCTTCTCTGGTGAGA...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR GCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGCACCGACTCCCTCTGTaGACGCTCACACATGGGGAC +
Preference number: 2 (lower is better)
Translates to: NLSSHLNFSATISNVMFVHRLPL*TLTHGD
Trigger: GTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTG...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR GCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTAAGAATGTTCCAGGATaGTGGCATTTTGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICKNVPG*WHFEGT
Trigger: AGTGCCTTCAAAATGCCAGCATCCTGGAACATTCTT...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGATACAATTAATGCTCTaGATTAATCTCACAGCCTTC +
Preference number: 2 (lower is better)
Translates to: RRGTLPHSGLDISTPATWIQLML*INLTAF
Trigger: GAAGGCTGTGAGATTAATCCAGAGCATTAATTGTAT...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTGTAAGTGATTTAGCCTaGGAACTCAGTTCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICVSDLA*ELSSLR
Trigger: TCTGAGAGAACTGAGTTCCCAGGCTAAATCACTTAC...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CCA 90 bp AGAGGATCTCTGGTTTGCTTTATCGAGGTAGTGTCCAGGGTTGGAAGGTCATCAATTGGCTTGGGTACCTaGGTGCTCAAAGAATGTGTA +
Preference number: 2 (lower is better)
Translates to: RGSLVCFIEVVSRVGRSSIGLGT*VLKECV
Trigger: TACACATTCTTTGAGCACCCAGGTACCCAAGCCAAT...TGATGACCTTCCAACCCTGGACACTACCTCGATAAAGCAAACCAGAGATCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTTTTATTGCTCCCTTGTaGACAAAGCCAGAACTGCTG +
Preference number: 2 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSFIAPL*TKPELL
Trigger: CAGCAGTTCTGGCTTTGTCCACAAGGGAGCAATAAA...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR TCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTGCTGGCACCAAAAGCTaGAAAGAATTCCTTACCATA +
Preference number: 2 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSAGTKS*KEFLTI
Trigger: TATGGTAAGGAATTCTTTTCAGCTTTTGGTGCCAGC...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR TCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTAGAAAGGAAAAATGCTaGCTAAGGCCCAAATGCTCA +
Preference number: 2 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSRKEKC*LRPKCS
Trigger: TGAGCATTTGGGCCTTAGTCAGCATTTTTCCTTTCT...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACGCTCAACTCTGTAGCTaGCACCAAAAGCTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: IGALRQVTDREGAHTVSNAQLCS*HQKLKR
Trigger: TCTTTTCAGCTTTTGGTGCCAGCTACAGAGTTGAGC...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR TCA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGAGGCGGAGGAGAGTCTaGGAACTAAGGAAATGCTCA +
Preference number: 2 (lower is better)
Translates to: SVINTLALLFSLSYNKLLRRRRV*ELRKCS
Trigger: TGAGCATTTCCTTAGTTCTCAGACTCTCCTCCGCCT...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR TCA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGGCCTATCCCCTCTTTaGGGAGAAGTCTGGGATATA +
Preference number: 2 (lower is better)
Translates to: SVINTLALLFSLSYNKLLGLSPL*GEVWDI
Trigger: TATATCCCAGACTTCTCCTCAAAGAGGGGATAGGCC...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR TCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAAGACTGAAGCTGCAGTaGCATCAGAGGATTAGAGAG +
Preference number: 2 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIRLKLQ*HQRIRE
Trigger: CTCTCTAATCCTCTGATGTCACTGCAGCTTCAGTCT...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR GCA 90 bp AATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGAGACTTGGAGGCTGTAGTGTaGTATAACTGCACCTGTGAA +
Preference number: 2 (lower is better)
Translates to: NVPGCWHFEGTQKQSERDLEAVV*YNCTCE
Trigger: TTCACAGGTGCAGTTATAGCACACTACAGCCTCCAA...GTCTCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR GCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAAAACTTGTCATGGAATaGCAAGGAGACTGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIKLVME*QGDCGG
Trigger: CCCTCCACAGTCTCCTTGGCATTCCATGACAAGTTT...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CCA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGTGCAGTAACCTGGTCTaGAGACCCTCTCAGATACAT +
Preference number: 2 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLCSNLV*RPSQIH
Trigger: ATGTATCTGAGAGGGTCTCCAGACCAGGTTACTGCA...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACTTGACAAACTTGTCATaGAATGCCAAGGAGACTGTG +
Preference number: 2 (lower is better)
Translates to: IGALRQVTDREGAHTVSNLTNLS*NAKETV
Trigger: CACAGTCTCCTTGGCATTCCATGACAAGTTTGTCAA...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTTTCATTCAGAGGAGCTaGATATTCCAGAAACAACTT +
Preference number: 2 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICFIQRS*IFQKQL
Trigger: AAGTTGTTTCTGGAATATCCAGCTCCTCTGAATGAA...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR CCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATACGTTGTTTTATGGCCTaGGACCCTCATCAGCTGATA +
Preference number: 2 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIRCFMA*DPHQLI
Trigger: TATCAGCTGATGAGGGTCCCAGGCCATAAAACAACG...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508237.5
3UTR CAA 90 bp GCAACTTTTATGGCTTCCATAGAAAGTGTAGAGAGGATCTCTGGTTaGCTTTATCGAGGTAGTGTCCAGGGTTGGAAGGTCATCATTCTT +
Preference number: 2 (lower is better)
Translates to: ATFMASIESVERISG*LYRGSVQGWKVIIL
Trigger: AAGAATGATGACCTTCCAACCCTGGACACTACCTCGATAAAGCAAACCAGAGATCCTCTCTACACTTTCTATGGAAGCCATAAAAGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR TCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACTACATGAATAAGCTTTaGGCTAAGAGGCTATTCCAG +
Preference number: 2 (lower is better)
Translates to: IGALRQVTDREGAHTVSNYMNKL*AKRLFQ
Trigger: CTGGAATAGCCTCTTAGCTCAAAGCTTATTCATGTA...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR GCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAGCAAAACCTCATTTTTaGAGTAACCTGGTCTGGAGA +
Preference number: 2 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQAKPHF*SNLVWR
Trigger: TCTCCAGACCAGGTTACTGCAAAAATGAGGTTTTGC...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACCTACATATATGCCCTTaGGGAGACAACTTAAGAAGT +
Preference number: 2 (lower is better)
Translates to: IGALRQVTDREGAHTVSNLHICP*GDNLRS
Trigger: ACTTCTTAAGTTGTCTCCCCAAGGGCATATATGTAG...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR CAA 90 bp TTCTTTAGAAGGTTGAGAATAAAGCTAACGTACTTTATTGCTCCCTaGTGGACAAAGCCAGAACTGCTGATGGAAAACAGTCACACAGCC +
Preference number: 2 (lower is better)
Translates to: FFRRLRIKLTYFIAP*WTKPELLMENSHTA
Trigger: GGCTGTGTGACTGTTTTCCATCAGCAGTTCTGGCTTTGTCCACAAGGGAGCAATAAAGTACGTTAGCTTTATTCTCAACCTTCTAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR TCA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTAGGCGGAGGAGAGTCTaGGAACTAAGGAAATGCTCA +
Preference number: 2 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFRRRRV*ELRKCS
Trigger: TGAGCATTTCCTTAGTTCTCAGACTCTCCTCCGCCT...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR TCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGGATCTGTTGATTCAGTaGCACTGGCGAAGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: NLSSHLNFSATISNVMFVDLLIQ*HWRSSW
Trigger: CCAAGAGCTTCGCCAGTGTCACTGAATCAACAGATC...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR TCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAATTAGGGAGCCTCTCTTaGGTGTTAAGCAGAGATGTC +
Preference number: 2 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQLGSLS*VLSRDV
Trigger: GACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAA...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR TCA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTGACTGAGATGAAATaGTCTCCACTACTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: SVINTLALLFSLSYNKLLVTEMK*SPLLPP
Trigger: AGGAGGAAGTAGTGGAGATCATTTCATCTCAGTCAC...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR TCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATATCAGAAGTTTCCTACTaGAGACATACAAGACAGCAG +
Preference number: 2 (lower is better)
Translates to: HQSLLGIMRDERRLDFVISEVSY*RHTRQQ
Trigger: CTGCTGTCTTGTATGTCTTCAGTAGGAAACTTCTGA...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR GCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAAGCTTGGGTACCTGGGTaGTCAAAGAATGTGTACAAA +
Preference number: 2 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKAWVPG*SKNVYK
Trigger: TTTGTACACATTCTTTGAGCACCCAGGTACCCAAGC...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR GCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAAAACTTGTCATGGAATaGCAAGGAGACTGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQKLVME*QGDCGG
Trigger: CCCTCCACAGTCTCCTTGGCATTCCATGACAAGTTT...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR GCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACAAGGATGGTGGTATTTaGTTAATACTGGTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: IGALRQVTDREGAHTVSNKDGGI*LILVFL
Trigger: CAGGAAAACCAGTATTAAGCAAATACCACCATCCTT...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAAATTTTTGCAGTAACCTaGTCTGGAGACCCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKIFAVT*SGDPLR
Trigger: TCTGAGAGGGTCTCCAGACCAGGTTACTGCAAAAAT...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CCA 90 bp ACTTTTATGGCTTCCATAGAAAGTGTAGAGAGGATCTCTGGTTTGCTTTATCGAGCAAGCTCCGCCTCCTaGGTTCAATGTTGTGAATAT +
Preference number: 2 (lower is better)
Translates to: TFMASIESVERISGLLYRASSAS*VQCCEY
Trigger: ATATTCACAACATTGAACCCAGGAGGCGGAGCTTGC...TCGATAAAGCAAACCAGAGATCCTCTCTACACTTTCTATGGAAGCCATAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACTCCTGGCTTTCAATCTaGGGATCATCAATATGTAAA +
Preference number: 2 (lower is better)
Translates to: IGALRQVTDREGAHTVSNSWLSI*GSSICK
Trigger: TTTACATATTGATGATCCCCAGATTGAAAGCCAGGA...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR TCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGTTCCCTTGGATCTGTTaGTTCAGTGACACTGGCGAA +
Preference number: 2 (lower is better)
Translates to: NLSSHLNFSATISNVMFVFPWIC*FSDTGE
Trigger: TTCGCCAGTGTCACTGAATCAACAGATCCAAGGGAA...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR TCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGTTAGGGAGCCTCTCTTaGGTGTTAAGCAGAGATGTC +
Preference number: 2 (lower is better)
Translates to: NLSSHLNFSATISNVMFVLGSLS*VLSRDV
Trigger: GACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAA...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTGCAGTAACCTGGTCTaGAGACCCTCTCAGATACAT +
Preference number: 2 (lower is better)
Translates to: KYDLLSVINTLALLFSLSCSNLV*RPSQIH
Trigger: ATGTATCTGAGAGGGTCTCCAGACCAGGTTACTGCA...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR TCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAAACTTTCAAATGCAATaGAACAGTCTTGAGTCCTGT +
Preference number: 2 (lower is better)
Translates to: HQSLLGIMRDERRLDFVINFQMQ*NSLESC
Trigger: ACAGGACTCAAGACTGTTTCATTGCATTTGAAAGTT...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR GCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGCAAAACCTCATTTTTaGAGTAACCTGGTCTGGAGA +
Preference number: 2 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQAKPHF*SNLVWR
Trigger: TCTCCAGACCAGGTTACTGCAAAAATGAGGTTTTGC...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGGCTCAACTCTGTAGCTaGCACCAAAAGCTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: NLSSHLNFSATISNVMFVAQLCS*HQKLKR
Trigger: TCTTTTCAGCTTTTGGTGCCAGCTACAGAGTTGAGC...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR TCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAAGAAGTTCCCCAAACTTaGAAAAGTAATCTGCCTAAA +
Preference number: 2 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKEVPQT*KSNLPK
Trigger: TTTAGGCAGATTACTTTTTCAAGTTTGGGGAACTTC...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR TCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAACCAGGAAGTATGTCTTaGTATACTTTTCTGCCTCAT +
Preference number: 2 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQPGSMS*YTFLPH
Trigger: ATGAGGCAGAAAAGTATATCAAGACATACTTCCTGG...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CCA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGATACAATTAATGCTCTaGATTAATCTCACAGCCTTC +
Preference number: 2 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLIQLML*INLTAF
Trigger: GAAGGCTGTGAGATTAATCCAGAGCATTAATTGTAT...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CCA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTATATACTGTGAAACATaGCCAGCTCAACTCTGTAGC +
Preference number: 2 (lower is better)
Translates to: HYILSSFPEDHKSQVKESIYCET*PAQLCS
Trigger: GCTACAGAGTTGAGCTGGCCATGTTTCACAGTATAT...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR CAA 90 bp CTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTaGAAGTTCCCCAAACTTGAAAAAGTAATCTGCCTAAAGGTACTA +
Preference number: 2 (lower is better)
Translates to: LFSLSYNKLLVDYGL*KFPKLEKVICLKVL
Trigger: TAGTACCTTTAGGCAGATTACTTTTTCAAGTTTGGGGAACTTCAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR CAA 90 bp CAATTCTCACAATTTTGCACTATCTCACCAATAATATCTTTCCTGTaGCCAGACAGGAAAGATGGAGAATGTATTAACAGCTGCCTTCTT +
Preference number: 2 (lower is better)
Translates to: QFSQFCTISPIISFL*PDRKDGECINSCLL
Trigger: AAGAAGGCAGCTGTTAATACATTCTCCATCTTTCCTGTCTGGCAACAGGAAAGATATTATTGGTGAGATAGTGCAAAATTGTGAGAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR CAA 90 bp GGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTAGAAGGTaGAGAATAAAGCTAACGTACTTTATTGCTCCCTTGTGGACAAAG +
Preference number: 2 (lower is better)
Translates to: GYSRRDLKVGSFFRR*RIKLTYFIAPLWTK
Trigger: CTTTGTCCACAAGGGAGCAATAAAGTACGTTAGCTTTATTCTCAACCTTCTAAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR TCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGAAGTTCCCCAAACTTaGAAAAGTAATCTGCCTAAA +
Preference number: 2 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQEVPQT*KSNLPK
Trigger: TTTAGGCAGATTACTTTTTCAAGTTTGGGGAACTTC...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR GCA 72 bp TGGCCTGCGGAGGAGATAGGAGTGGAGAAGCCTGCCTaGTCTGCCTTTAGCACACAAAGGCGCCCCTATGGG +
Preference number: 3 (lower is better)
Translates to: WPAEEIGVEKPA*SAFSTQRRPYG
Trigger: CCCATAGGGGCGCCTTTGTGTGCTAAAGGCAGAGCAGGCAGGCTTCTCCACTCCTATCTCCTCCGCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR CAA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGCTGAGGCAGGGTTGCTaGAACCCAAGAGTTGGAGGC +
Preference number: 3 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWLRQGC*NPRVGG
Trigger: GCCTCCAACTCTTGGGTTCAAGCAACCCTGCCTCAG...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR GCA 72 bp AGGGAGCACACACAGTTTCTAACCTGGAGTGCCCGTTaGACTGGTCAGGAGGAAGTGCCTGACCTAGAGGAC +
Preference number: 3 (lower is better)
Translates to: REHTQFLTWSAR*TGQEEVPDLED
Trigger: GTCCTCTAGGTCAGGCACTTCCTCCTGACCAGTGCAACGGGCACTCCAGGTTAGAAACTGTGTGTGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR CCA 72 bp GGTATTGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTaGCCAGGCAGAAATCAGTTAAGAAGGCCATTCCAG +
Preference number: 3 (lower is better)
Translates to: GIAQVQTWLGVR*PGRNQLRRPFQ
Trigger: CTGGAATGGCCTTCTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCAATACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR CAA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTACACTGGCGAAGCTCTaGGTAGAGGCGGAGGAGAGT +
Preference number: 3 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICTLAKL*VEAEES
Trigger: ACTCTCCTCCGCCTCTACCAAGAGCTTCGCCAGTGT...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR TCA 72 bp GACAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTaGCAAGCAAGTACAGCTCTCCGTTGTTTTATGGCC +
Preference number: 3 (lower is better)
Translates to: DSRLSQGCGSSK*QASTALRCFMA
Trigger: GGCCATAAAACAACGGAGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR GCA 72 bp TGTCAAGTGTTGGAGTTACAAGTAGACACCTCTCTGTaGCTGGTATTGCTCAGGTTCAGACTTGGCTGGGGG +
Preference number: 3 (lower is better)
Translates to: CQVLELQVDTSL*LVLLRFRLGWG
Trigger: CCCCCAGCCAAGTCTGAACCTGAGCAATACCAGGCACAGAGAGGTGTCTACTTGTAACTCCAACACTTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR CAA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAACACTGGCGAAGCTCTaGGTAGAGGCGGAGGAGAGT +
Preference number: 3 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQTLAKL*VEAEES
Trigger: ACTCTCCTCCGCCTCTACCAAGAGCTTCGCCAGTGT...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CAA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTACTTTCCTTATTGGCTaGGGTACCTGGGTGCTCAAA +
Preference number: 3 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICTFLIG*GTWVLK
Trigger: TTTGAGCACCCAGGTACCCAAGCCAATAAGGAAAGT...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR GCA 72 bp AAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTaGTCTTGTTCCTCCTATAGATGTGATGGTGGTGGC +
Preference number: 3 (lower is better)
Translates to: KHFLTHTPEFPQ*SCSSYRCDGGG
Trigger: GCCACCACCATCACATCTATAGGAGGAACAAGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR CAA 90 bp TACAAGACAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACTCAAGGTAGTCTTCTaGTTCATTCCCTTGGATCTG +
Preference number: 3 (lower is better)
Translates to: YKTAGCLKDVVPPSDKQVLKVVF*FIPLDL
Trigger: CAGATCCAAGGGAATGAACAAGAAGACTACCTTGAG...TACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTGTCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR CAA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAACTGAGGCAGGGTTGCTaGAACCCAAGAGTTGGAGGC +
Preference number: 3 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQLRQGC*NPRVGG
Trigger: GCCTCCAACTCTTGGGTTCAAGCAACCCTGCCTCAG...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CAA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTTACTTTATTGCTCCCTaGTGGACAAAGCCAGAACTG +
Preference number: 3 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSYFIAP*WTKPEL
Trigger: CAGTTCTGGCTTTGTCCACAAGGGAGCAATAAAGTA...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR TCA 72 bp AAGACCTGTCCACAGCACAAACTTCCACTCTGGCTGTaGAGGACTAGCCAATTGCTAAATGTTTCATCACGG +
Preference number: 3 (lower is better)
Translates to: KTCPQHKLPLWL*RTSQLLNVSSR
Trigger: CCGTGATGAAACATTTAGCAATTGGCTAGTCCTTCACAGCCAGAGTGGAAGTTTGTGCTGTGGACAGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CAA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGACACTGGCGAAGCTCTaGGTAGAGGCGGAGGAGAGT +
Preference number: 3 (lower is better)
Translates to: NLSSHLNFSATISNVMFVTLAKL*VEAEES
Trigger: ACTCTCCTCCGCCTCTACCAAGAGCTTCGCCAGTGT...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CAA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACTGTAGGTTGACAAACTaGTCATGGAATGCCAAGGAG +
Preference number: 3 (lower is better)
Translates to: IGALRQVTDREGAHTVSNCRLTN*SWNAKE
Trigger: CTCCTTGGCATTCCATGACAAGTTTGTCAACCTACA...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR CCA 72 bp CCAAGTGACAAGCAAGTACAGCTCTCCGTTGTTTTATaGCCTGGGACCCTGAAGAGAAAAGCCACAAATTTT +
Preference number: 3 (lower is better)
Translates to: PSDKQVQLSVVL*PGTLKRKATNF
Trigger: AAAATTTGTGGCTTTTCTCTTCAGGGTCCCAGGCCATAAAACAACGGAGAGCTGTACTTGCTTGTCACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CAA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGAGGCCTATCCCCTCTTaGAGGAGAAGTCTGGGATAT +
Preference number: 3 (lower is better)
Translates to: SVINTLALLFSLSYNKLLRPIPS*RRSLGY
Trigger: ATATCCCAGACTTCTCCTCAAAGAGGGGATAGGCCT...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR TCA 72 bp CATTTTGAAGGCACTCAAAAACAGAGTGAGAGAGACTaGAGCTGCAGTGACATCAGAGGATTAGAGAGAGGT +
Preference number: 3 (lower is better)
Translates to: HFEGTQKQSERD*SCSDIRGLERG
Trigger: ACCTCTCTCTAATCCTCTGATGTCACTGCAGCTTCAGTCTCTCTCACTCTGTTTTTGAGTGCCTTCAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR TCA 72 bp ACTTTATTGCTCCCTTGTGGACAAAGCCAGAACTGCTaGTGGAAAACAGTCACACAGCCCATGTCAAGAAAT +
Preference number: 3 (lower is better)
Translates to: TLLLPCGQSQNC*WKTVTQPMSRN
Trigger: ATTTCTTGACATGGGCTGTGTGACTGTTTTCCATCAGCAGTTCTGGCTTTGTCCACAAGGGAGCAATAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR CAA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATATGCAATGAAACAGTCTaGAGTCCTGTACAGGATGTC +
Preference number: 3 (lower is better)
Translates to: HQSLLGIMRDERRLDFVICNETV*SPVQDV
Trigger: GACATCCTGTACAGGACTCAAGACTGTTTCATTGCA...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR TCA 72 bp CATGGCCAGCTCAACTCTGTAGCTGGCACCAAAAGCTaGAAAGAATTCCTTACCATACACAGTGATACAATT +
Preference number: 3 (lower is better)
Translates to: HGQLNSVAGTKS*KEFLTIHSDTI
Trigger: AATTGTATCACTGTGTATGGTAAGGAATTCTTTTCAGCTTTTGGTGCCAGCTACAGAGTTGAGCTGGCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CAA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTAGGCCTATCCCCTCTTaGAGGAGAAGTCTGGGATAT +
Preference number: 3 (lower is better)
Translates to: HYILSSFPEDHKSQVKESRPIPS*RRSLGY
Trigger: ATATCCCAGACTTCTCCTCAAAGAGGGGATAGGCCT...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CAA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACGTTGATTATGGTCTTTaGAAGTTCCCCAAACTTGAA +
Preference number: 3 (lower is better)
Translates to: IGALRQVTDREGAHTVSNVDYGL*KFPKLE
Trigger: TTCAAGTTTGGGGAACTTCAAAAGACCATAATCAAC...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CAA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAATGTAGGTTGACAAACTaGTCATGGAATGCCAAGGAG +
Preference number: 3 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKCRLTN*SWNAKE
Trigger: CTCCTTGGCATTCCATGACAAGTTTGTCAACCTACA...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR TCA 72 bp ACTTCCCACCAACTTTCAAATGCAATGAAACAGTCTTaGGTCCTGTACAGGATGTCTATCATGCTCATCAGA +
Preference number: 3 (lower is better)
Translates to: TSHQLSNAMKQS*VLYRMSIMLIR
Trigger: TCTGATGAGCATGATAGACATCCTGTACAGGACTCAAGACTGTTTCATTGCATTTGAAAGTTGGTGGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR TCA 72 bp ACCCACACATCAATCATTGCTTGGCATCATGAGGGATaGACGACGACTGGACTTTGTAATAAGGGAAAATTT +
Preference number: 3 (lower is better)
Translates to: THTSIIAWHHEG*TTTGLCNKGKF
Trigger: AAATTTTCCCTTATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATGTGTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR GCA 72 bp TTGCCAGACAGGAAAGATGGAGAATGTATTAACAGCTaGCTTCTTAGATACCCACCTTGTGTGGTTATTAGT +
Preference number: 3 (lower is better)
Translates to: LPDRKDGECINS*LLRYPPCVVIS
Trigger: ACTAATAACCACACAAGGTGGGTATCTAAGAAGGCAGCTGTTAATACATTCTCCATCTTTCCTGTCTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR CCA 72 bp ATATACTGTGAAACATGGCCAGCTCAACTCTGTAGCTaGCACCAAAAGCTGAAAAGAATTCCTTACCATACA +
Preference number: 3 (lower is better)
Translates to: IYCETWPAQLCS*HQKLKRIPYHT
Trigger: TGTATGGTAAGGAATTCTTTTCAGCTTTTGGTGCCAGCTACAGAGTTGAGCTGGCCATGTTTCACAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR CCA 72 bp ATCTCTGGTTTGCTTTATCGAGGTAGTGTCCAGGGTTaGAAGGTCATCATTCTTTATTGTAAGTGCTACAGA +
Preference number: 3 (lower is better)
Translates to: ISGLLYRGSVQG*KVIILYCKCYR
Trigger: TCTGTAGCACTTACAATAAAGAATGATGACCTTCCAACCCTGGACACTACCTCGATAAAGCAAACCAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR CCA 72 bp TTGAGAATAAAGCTAACGTACTTTATTGCTCCCTTGTaGACAAAGCCAGAACTGCTGATGGAAAACAGTCAC +
Preference number: 3 (lower is better)
Translates to: LRIKLTYFIAPL*TKPELLMENSH
Trigger: GTGACTGTTTTCCATCAGCAGTTCTGGCTTTGTCCACAAGGGAGCAATAAAGTACGTTAGCTTTATTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR-3UTR CAA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAAGAAGCACCTTTTGAGTaGTACGGATGTAAGAATAGC +
Preference number: 3 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKEAPFE*YGCKNS
Trigger: GCTATTCTTACATCCGTACAACTCAAAAGGTGCTTC...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CAA 90 bp ACTTTTATGGCTTCCATAGAAAGTGTAGAGAGGATCTCTGGTTTGCTTTATCGAATTAGGGAGCCTCTCTaGAGTGTTAAGCAGAGATGT +
Preference number: 3 (lower is better)
Translates to: TFMASIESVERISGLLYRIREPL*SVKQRC
Trigger: ACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAAT...TCGATAAAGCAAACCAGAGATCCTCTCTACACTTTCTATGGAAGCCATAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CAA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTCTCAAGGTAGTCTTCTaGTTCATTCCCTTGGATCTG +
Preference number: 3 (lower is better)
Translates to: HYILSSFPEDHKSQVKESLKVVF*FIPLDL
Trigger: CAGATCCAAGGGAATGAACAAGAAGACTACCTTGAG...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR GCA 72 bp AGGACTAGCCAATTGCTAAATGTTTCATCACGGAGGTaGTCGATCATATTATATAAAACACTGCAACCTCCT +
Preference number: 3 (lower is better)
Translates to: RTSQLLNVSSRR*SIILYKTLQPP
Trigger: AGGAGGTTGCAGTGTTTTATATAATATGATCGAGCACCTCCGTGATGAAACATTTAGCAATTGGCTAGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR-3UTR CAA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGGAAGCACCTTTTGAGTaGTACGGATGTAAGAATAGC +
Preference number: 3 (lower is better)
Translates to: NLSSHLNFSATISNVMFVEAPFE*YGCKNS
Trigger: GCTATTCTTACATCCGTACAACTCAAAAGGTGCTTC...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CAA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTCTCTGAAGCACCTTTaGAGTTGTACGGATGTAAGA +
Preference number: 3 (lower is better)
Translates to: KYDLLSVINTLALLFSLSSLKHL*SCTDVR
Trigger: TCTTACATCCGTACAACTCAAAAGGTGCTTCAGAGA...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR-3UTR CAA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAACCAGGAAGTATGTCTaGATATACTTTTCTGCCTCA +
Preference number: 3 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQTRKYV*IYFSAS
Trigger: TGAGGCAGAAAAGTATATCAAGACATACTTCCTGGT...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR CCA 72 bp AATTCCTTACCATACACAGTGATACAATTAATGCTCTaGATTAATCTCACAGCCTTCCCGATTAGTACAAAG +
Preference number: 3 (lower is better)
Translates to: NSLPYTVIQLML*INLTAFPISTK
Trigger: CTTTGTACTAATCGGGAAGGCTGTGAGATTAATCCAGAGCATTAATTGTATCACTGTGTATGGTAAGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR CCA 72 bp AAATCATCCCATTTTCAGAGGCTACATATATGCCCTTaGGGAGACAACTTAAGAAGTAAACACCAAAATTAT +
Preference number: 3 (lower is better)
Translates to: KSSHFQRLHICP*GDNLRSKHQNY
Trigger: ATAATTTTGGTGTTTACTTCTTAAGTTGTCTCCCCAAGGGCATATATGTAGCCTCTGAAAATGGGATGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR TCA 72 bp TTCAAATTTAAAAATCTAACTCCGAATGAGCCTATCTaGCTCAATTTGAGAAAGCAGCAGCCTTTATTAAGG +
Preference number: 3 (lower is better)
Translates to: FKFKNLTPNEPI*LNLRKQQPLLR
Trigger: CCTTAATAAAGGCTGCTGCTTTCTCAAATTGAGTCAGATAGGCTCATTCGGAGTTAGATTTTTAAATTTGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR CCA 72 bp TGCAAGGAATTAACTTTCCTTATTGGCTTGGGTACCTaGGTGCTCAAAGAATGTGTACAAATATTAAAAATA +
Preference number: 3 (lower is better)
Translates to: CKELTFLIGLGT*VLKECVQILKI
Trigger: TATTTTTAATATTTGTACACATTCTTTGAGCACCCAGGTACCCAAGCCAATAAGGAAAGTTAATTCCTTGCA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGCCAAGATCACGCCACTaGACTCCAGCCCAGGCAACA +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEPRSRH*TPAQAT
Trigger: TGTTGCCTGGGCTGGAGTGCAGTGGCGTGATCTTGG...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGGATCTGGACAGCAGGTaGCACATTCACGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEDLDSR*HIHGAG
Trigger: ACCAGCCCCGTGAATGTGCCACCTGCTGTCCAGATC...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGGAGGGGTTGGGGTTGTaGCTGTGTTCACCACAGAAG +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEEGLGL*LCSPQK
Trigger: CTTCTGTGGTGAACACAGCCACAACCCCAACCCCTC...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGCAGCATGGGCTCCTTTaGAGATTCAGGAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEQHGLL*RFRSGA
Trigger: AGCTCCGCTCCTGAATCTCCAAAGGAGCCCATGCTG...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGGATCTGGACAGCAGGTaGCACATTCACGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWDLDSR*HIHGAG
Trigger: ACCAGCCCCGTGAATGTGCCACCTGCTGTCCAGATC...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGGTAGTCCCAGCTACTTaGTTAGCTGAGGCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEVVPAT*LAEAGL
Trigger: CAACCCTGCCTCAGCTAACCAAGTAGCTGGGACTAC...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGAAGGAAGATGGCACTTaGCCACGACGGCTATCTTCT +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEKEDGT*PRRLSS
Trigger: AGAAGATAGCCGTCGTGGTCAAGTGCCATCTTCCTT...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGAGGCGGAGGAGAGTCTaGGAACTAAGGAAATGCTCA +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLERRRRV*ELRKCS
Trigger: TGAGCATTTCCTTAGTTCTCAGACTCTCCTCCGCCT...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGACCTGGAGTGCCCGTTaGACTGGTCAGGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKTWSAR*TGQEEV
Trigger: CACTTCCTCCTGACCAGTGCAACGGGCACTCCAGGT...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAACGCCGCAGCGCTACGTaGCCGCCGCTCCGACGTCTC +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQRRSAT*PPLRRL
Trigger: GAGACGTCGGAGCGGCGGCCACGTAGCGCTGCGGCG...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR CAA 72 bp GCTGCCTGCCCTACACTGAGTCTACTTGACCTTCAATaGCGTCTCCGCAGAGAGGTAGGAGAGGGACACTGC +
Preference number: 4 (lower is better)
Translates to: AACPTLSLLDLQ*RLRREVGEGHC
Trigger: GCAGTGTCCCTCTCCTACCTCTCTGCGGAGACGCAATTGAAGGTCAAGTAGACTCAGTGTAGGGCAGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR CAA 72 bp AAAATGACTCAGGGAAGCCGGGCAGCATGGGCTCCTTaGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: KMTQGSRAAWAP*EIQERSSVPPH
Trigger: GTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAGCCCATGCTGCCCGGCTTCCCTGAGTCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGTTCCCTTGGATCTGTTaGTTCAGTGACACTGGCGAA +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEFPWIC*FSDTGE
Trigger: TTCGCCAGTGTCACTGAATCAACAGATCCAAGGGAA...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTGGGCGGGGGTTGCAGTaGGCCAAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSGRGLQ*AKITPL
Trigger: CAGTGGCGTGATCTTGGCTCACTGCAACCCCCGCCC...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGCAAAGCCAGAACTGCTaGTGGAAAACAGTCACACAG +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEQSQNC*WKTVTQ
Trigger: CTGTGTGACTGTTTTCCATCAGCAGTTCTGGCTTTG...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGCATTGCTTGGCATCATaGGGGATGAACGACGACTGG +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWHCLAS*GMNDDW
Trigger: CCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATG...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGTGTGCCCAATATGAATaGTCATGTGGGAGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLECAQYE*SCGSVA
Trigger: AGCTACGCTCCCACATGAGCATTCATATTGGGCACA...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGGTGGAGAAGCCTGCCTaGTCTGCCTTTAGCACACAA +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWVEKPA*SAFSTQ
Trigger: TTGTGTGCTAAAGGCAGAGCAGGCAGGCTTCTCCAC...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGCATTCCAGGTGTAAATaGCTCCCGGCTCTACAGGGG +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKHSRCK*LPALQG
Trigger: CCCCTGTAGAGCCGGGAGGCATTTACACCTGGAATG...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGCATTGCTGTCATCTGTaGCCTCTTCCTCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEHCCHL*PLPHSL
Trigger: AAGAGAGTGAGGAAGAGGCCACAGATGACAGCAATG...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGGCACATTCACGGGGCTaGTCACCCGAAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKAHSRG*SPESTS
Trigger: AGAAGTGCTTTCGGGTGACCAGCCCCGTGAATGTGC...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGGAGGGGTTGGGGTTGTaGCTGTGTTCACCACAGAAG +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKEGLGL*LCSPQK
Trigger: CTTCTGTGGTGAACACAGCCACAACCCCAACCCCTC...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGAAATTGGAGAGGGGGTaGGAGGTAAGTGATTTAGCC +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEKLERG*EVSDLA
Trigger: GGCTAAATCACTTACCTCCCACCCCCTCTCCAATTT...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGCTCTCCGTTGTTTTATaGCCTGGGACCCTCATCAGC +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWLSVVL*PGTLIS
Trigger: GCTGATGAGGGTCCCAGGCCATAAAACAACGGAGAG...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508237.5
3UTR CAA 72 bp ACACCTCTCTGTGCCTGGTATTGCTCAGGTTCAGACTaGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTT +
Preference number: 4 (lower is better)
Translates to: TPLCAWYCSGSD*AGGEVARQKSV
Trigger: AACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCAATACCAGGCACAGAGAGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGTTACAGGATTCATATTaGTTGGAGGGGTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLELQDSY*LEGLGL
Trigger: CAACCCCAACCCCTCCAATCAATATGAATCCTGTAA...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGCATGCAAGCTTTAGGTaGCTTCCCTGGAAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: RRGTLPHSGLDISTPATWHASFR*LPWKRP
Trigger: GGGCCTTTTCCAGGGAAGTCACCTAAAGCTTGCATG...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGCAGAGTGAGAGAGACTaGAGCTGCAGTGACATCAGA +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWQSERD*SCSDIR
Trigger: TCTGATGTCACTGCAGCTTCAGTCTCTCTCACTCTG...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGGCAATGAAACAGTCTTaGGTCCTGTACAGGATGTCT +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEAMKQS*VLYRMS
Trigger: AGACATCCTGTACAGGACTCAAGACTGTTTCATTGC...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGCTGACCTGTTTGTTGTaGAGATGCTGCTGCAATAAG +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLELTCLL*RCCCNK
Trigger: CTTATTGCAGCAGCATCTTCACAACAAACAGGTCAG...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGTCTTCCTTAACAGCATaGACGTCAGACACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLESSLTA*TSDTAL
Trigger: AAGAGCAGTGTCTGACGTGCATGCTGTTAAGGAAGA...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp CAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTCCAAGATCACGCCACTaGACTCCAGCCCAGGCAACA +
Preference number: 4 (lower is better)
Translates to: QQAVSRMWFLQVTSKYSSPRSRH*TPAQAT
Trigger: TGTTGCCTGGGCTGGAGTGCAGTGGCGTGATCTTGG...AGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGGTAGGAGAGGGACACTaGCCCATTCTGGACTTGACA +
Preference number: 4 (lower is better)
Translates to: RRGTLPHSGLDISTPATWVGEGH*PILDLT
Trigger: TGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCTAC...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGATTTTTGCAGTAACCTaGTCTGGAGACCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEIFAVT*SGDPLR
Trigger: TCTGAGAGGGTCTCCAGACCAGGTTACTGCAAAAAT...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGATTGGCTTGGGTACCTaGGTGCTCAAAGAATGTGTA +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEIGLGT*VLKECV
Trigger: TACACATTCTTTGAGCACCCAGGTACCCAAGCCAAT...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGGCGACTGGAAAGCTATaGGAACACTTCTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKATGKL*EHFSGA
Trigger: TGCCCCTGAGAAGTGTTCCCATAGCTTTCCAGTCGC...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGTTTATTGCTCCCTTGTaGACAAAGCCAGAACTGCTG +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEFIAPL*TKPELL
Trigger: CAGCAGTTCTGGCTTTGTCCACAAGGGAGCAATAAA...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGGATCTGTTGATTCAGTaGCACTGGCGAAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKDLLIQ*HWRSSW
Trigger: CCAAGAGCTTCGCCAGTGTCACTGAATCAACAGATC...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGTTCCCTTGGATCTGTTaGTTCAGTGACACTGGCGAA +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWFPWIC*FSDTGE
Trigger: TTCGCCAGTGTCACTGAATCAACAGATCCAAGGGAA...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AGAGGATCTCTGGTTTGCTTTATCGAGGTAGTGTCCAGGGTTGGAAGGTCATCAAGCACTTTCGGAGGCTaGGGTGGGCGGATCACAAGG +
Preference number: 4 (lower is better)
Translates to: RGSLVCFIEVVSRVGRSSSTFGG*GGRITR
Trigger: CCTTGTGATCCGCCCACCTCAGCCTCCGAAAGTGCT...TGATGACCTTCCAACCCTGGACACTACCTCGATAAAGCAAACCAGAGATCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGAGACTGAAGCTGCAGTaGCATCAGAGGATTAGAGAG +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWRLKLQ*HQRIRE
Trigger: CTCTCTAATCCTCTGATGTCACTGCAGCTTCAGTCT...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGTCAGAAGTTTCCTACTaGAGACATACAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLESEVSY*RHTRQQ
Trigger: CTGCTGTCTTGTATGTCTTCAGTAGGAAACTTCTGA...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGTGGCATCATGAGGGATaGACGACGACTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKWHHEG*TTTGLC
Trigger: ACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCA...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGTGGCATCATGAGGGATaGACGACGACTGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: RRGTLPHSGLDISTPATWWHHEG*TTTGLC
Trigger: ACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCA...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGGAGGAAAAGTGCAAGTaGTCTCAGTACTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWEEKCK*SQYCWG
Trigger: TCCCCAACAGTACTGAGATCACTTGCACTTTTCCTC...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGTACACTGAGTCTACTTaGCCTTCAATTGCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWYTEST*PSIASP
Trigger: CGGAGACGCAATTGAAGGTCAAGTAGACTCAGTGTA...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTCACCGACTCCCTCTGTaGACGCTCACACATGGGGAC +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSHRLPL*TLTHGD
Trigger: GTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTG...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGGCAAAACCTCATTTTTaGAGTAACCTGGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEAKPHF*SNLVWR
Trigger: TCTCCAGACCAGGTTACTGCAAAAATGAGGTTTTGC...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGGGTTTCGCATGTAAATaGCATGTCTTTTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEGFACK*HVFCVC
Trigger: GCACACACAAAAGACATGCCATTTACATGCGAAACC...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGGCTGTCTCAAGGATGTaGTTCCTCCAAGTGACAAGC +
Preference number: 4 (lower is better)
Translates to: RRGTLPHSGLDISTPATWAVSRM*FLQVTS
Trigger: GCTTGTCACTTGGAGGAACCACATCCTTGAGACAGC...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGCCTATGGGAAGGTCCTaGCTTTCAATCTGGGGATCA +
Preference number: 4 (lower is better)
Translates to: RRGTLPHSGLDISTPATWPMGRS*LSIWGS
Trigger: TGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGG...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGACACAGTTTCTAACCTaGAGTGCCCGTTGCACTGGT +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKTQFLT*SARCTG
Trigger: ACCAGTGCAACGGGCACTCCAGGTTAGAAACTGTGT...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGCCAGGAAGTATGTCTTaGTATACTTTTCTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEPGSMS*YTFLPH
Trigger: ATGAGGCAGAAAAGTATATCAAGACATACTTCCTGG...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGGGGCGGGGGTTGCAGTaGGCCAAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLGRGLQ*AKITPL
Trigger: CAGTGGCGTGATCTTGGCTCACTGCAACCCCCGCCC...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGCACAGGCTCTTTAGTTaGTCAGAACTAGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: RRGTLPHSGLDISTPATWHRLFS*SELAKA
Trigger: TGCCTTGGCTAGTTCTGATCAACTAAAGAGCCTGTG...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTTCAGGAGGAAGTGCCTaGCCTAGAGGACTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICSGGSA*PRGLVP
Trigger: GGGAACAAGTCCTCTAGGTCAGGCACTTCCTCCTGA...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGTCTTCCTTAACAGCATaGACGTCAGACACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWSSLTA*TSDTAL
Trigger: AAGAGCAGTGTCTGACGTGCATGCTGTTAAGGAAGA...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGTTCTACCTCCTTTCTTaGCCCATCCTCACTTCCTAT +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWFYLLS*PILTSY
Trigger: ATAGGAAGTGAGGATGGGGCAAGAAAGGAGGTAGAA...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTTCAGTTCCACCTCACTaGAGTTCCCTGGGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSSVPPH*SSLGPS
Trigger: GCTTGGCCCCAGGGAACTGCAGTGAGGTGGAACTGA...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGCTTTCCTTATTGGCTTaGGTACCTGGGTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKLSLLA*VPGCSK
Trigger: CTTTGAGCACCCAGGTACCCAAGCCAATAAGGAAAG...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGCTACATATATGCCCTTaGGGAGACAACTTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: MLTDSLCARSHMGTCLLELHICP*GDNLRS
Trigger: ACTTCTTAAGTTGTCTCCCCAAGGGCATATATGTAG...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACGCTCAGGTTCAGACTTaGCTGGGGGTGAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: IGALRQVTDREGAHTVSNAQVQT*LGVRWP
Trigger: TGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGC...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGGAGCTGCAAGGGACTTaGGAGCATCTTATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKELQGT*EHLIFL
Trigger: AAGGAAGATAAGATGCTCCCAAGTCCCTTGCAGCTC...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508237.5
CDS-3UTR TCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTTCAGGAGGAAGTGCCTaGCCTAGAGGACTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSSGGSA*PRGLVP
Trigger: GGGAACAAGTCCTCTAGGTCAGGCACTTCCTCCTGA...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGGCAAAACCTCATTTTTaGAGTAACCTGGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWAKPHF*SNLVWR
Trigger: TCTCCAGACCAGGTTACTGCAAAAATGAGGTTTTGC...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGGCTAACGTACTTTATTaGTCCCTTGTGGACAAAGCC +
Preference number: 4 (lower is better)
Translates to: RRGTLPHSGLDISTPATWANVLY*SLVDKA
Trigger: GGCTTTGTCCACAAGGGAGCAATAAAGTACGTTAGC...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACTCAGTTCCACCTCACTaGAGTTCCCTGGGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: IGALRQVTDREGAHTVSNSVPPH*SSLGPS
Trigger: GCTTGGCCCCAGGGAACTGCAGTGAGGTGGAACTGA...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGATATACTGTGAAACATaGCCAGCTCAACTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWIYCET*PAQLCS
Trigger: GCTACAGAGTTGAGCTGGCCATGTTTCACAGTATAT...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp CAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTCCTATGGGAAGGTCCTaGCTTTCAATCTGGGGATCA +
Preference number: 4 (lower is better)
Translates to: QQAVSRMWFLQVTSKYSSPMGRS*LSIWGS
Trigger: TGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGG...AGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp AATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGAGACGCTCAGGTTCAGACTTaGCTGGGGGTGAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: NVPGCWHFEGTQKQSERDAQVQT*LGVRWP
Trigger: TGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGC...GTCTCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTCAGCATGGGCTCCTTTaGAGATTCAGGAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSQHGLL*RFRSGA
Trigger: AGCTCCGCTCCTGAATCTCCAAAGGAGCCCATGCTG...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGTCTCCTGCCACATTGTaGGCGCTCCGCCGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: SVINTLALLFSLSYNKLLSPATL*ALRRPD
Trigger: ATCTGGGCGGCGGAGCGCTCACAATGTGGCAGGAGA...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362063.6
CDS-3UTR TCA 90 bp TACAAGACAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTATGGCCTTCATCCTTATaGCCTAGCAGGCAGAACAGG +
Preference number: 4 (lower is better)
Translates to: YKTAGCLKDVVPPSDKQVWPSSL*PSRQNR
Trigger: CCTGTTCTGCCTGCTAGGTCATAAGGATGAAGGCCA...TACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTGTCTTGTA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTGTTTCTAACCTGGAGTaGCCGTTGCACTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSVSNLE*PLHWSG
Trigger: TCCTGACCAGTGCAACGGGCACTCCAGGTTAGAAAC...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTCTCTGTGCCTGGTATTaGTCAGGTTCAGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICLCAWY*SGSDLA
Trigger: AGCCAAGTCTGAACCTGAGCAATACCAGGCACAGAG...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAGATCTGGACAGCAGGTaGCACATTCACGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQDLDSR*HIHGAG
Trigger: ACCAGCCCCGTGAATGTGCCACCTGCTGTCCAGATC...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTGTTGTAAGTGGGATCTaGACAGCAGGTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICVVSGI*TAGGTF
Trigger: GAATGTGCCACCTGCTGTCCAGATCCCACTTACAAC...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGAAAGTAACCTGCGACTaGAAAGCTATGGGAACACTT +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKKVTCD*KAMGTL
Trigger: AAGTGTTCCCATAGCTTTCCAGTCGCAGGTTACTTT...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGAACAACTTGACTCTTTaGCACATCCAGTACAGACAC +
Preference number: 4 (lower is better)
Translates to: RRGTLPHSGLDISTPATWNNLTL*HIQYRH
Trigger: GTGTCTGTACTGGATGTGCCAAAGAGTCAAGTTGTT...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp AGAGGATCTCTGGTTTGCTTTATCGAGGTAGTGTCCAGGGTTGGAAGGTCATCAACAAAGGCGCCCCTATaGGAAGGTCCTGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: RGSLVCFIEVVSRVGRSSTKAPL*EGPGFQ
Trigger: TTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTTGT...TGATGACCTTCCAACCCTGGACACTACCTCGATAAAGCAAACCAGAGATCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTACAAAGGCGCCCCTATaGGAAGGTCCTGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSTKAPL*EGPGFQ
Trigger: TTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTTGT...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAGGAAGCCGGGCAGCATaGGCTCCTTTGGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQGSRAA*APLEIQ
Trigger: CTGAATCTCCAAAGGAGCCCATGCTGCCCGGCTTCC...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp CAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTCGTTGTTTTATGGCCTaGGACCCTCATCAGCTGATA +
Preference number: 4 (lower is better)
Translates to: QQAVSRMWFLQVTSKYSSRCFMA*DPHQLI
Trigger: TATCAGCTGATGAGGGTCCCAGGCCATAAAACAACG...AGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508237.5
3UTR CAA 72 bp TGCACTGGTCAGGAGGAAGTGCCTGACCTAGAGGACTaGTTCCCTGATGTAACAGATATCTCTTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CTGQEEVPDLED*FPDVTDISLEQ
Trigger: CTGCTCCAAAGAGATATCTGTTACATCAGGGAACAAGTCCTCTAGGTCAGGCACTTCCTCCTGACCAGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR CAA 72 bp TGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTCCGTaGTTTTATGGCCTGGGACCCTCATCAGCTGATATG +
Preference number: 4 (lower is better)
Translates to: WFLQVTSKYSSP*FYGLGPSSADM
Trigger: CATATCAGCTGATGAGGGTCCCAGGCCATAAAACAACGGAGAGCTGTACTTGCTTGTCACTTGGAGGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508237.5
CDS-3UTR TCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTAAGGAAGATGGCACTTaGCCACGACGGCTATCTTCT +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSKEDGT*PRRLSS
Trigger: AGAAGATAGCCGTCGTGGTCAAGTGCCATCTTCCTT...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTTCTCACCAGAGAAGCTaGCGTAGTGTGAAAGTAACC +
Preference number: 4 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICSHQRS*RSVKVT
Trigger: GGTTACTTTCACACTACGTCAGCTTCTCTGGTGAGA...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTCACAGGCTCTTTAGTTaGTCAGAACTAGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICHRLFS*SELAKA
Trigger: TGCCTTGGCTAGTTCTGATCAACTAAAGAGCCTGTG...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp CAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTTTTCCCTTCCCAGGTTaGTTACTGACCTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: QQAVSRMWFLQVTSKYSSFPFPG*LLTCLL
Trigger: CAACAAACAGGTCAGTAATCAACCTGGGAAGGGAAA...AGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTCTGCCTGCCCTACACTaGGTCTACTTGACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSLPALH*VYLTFN
Trigger: ATTGAAGGTCAAGTAGACTCAGTGTAGGGCAGGCAG...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGCATTCAGTGGCTTCATaGACAAAACTCTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKHSVAS*TKLFPL
Trigger: AAGTGGAAAGAGTTTTGTTCATGAAGCCACTGAATG...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508237.5
CDS-3UTR GCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACCCTGTGAATAGCCACTaGACTCTAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: IGALRQVTDREGAHTVSNPVNSH*TLAWAT
Trigger: TGTTGCCCAGGCTAGAGTGCAGTGGCTATTCACAGG...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGGAAGAATTCATGGGGTaGTGTAGCATATATGGAAGA +
Preference number: 4 (lower is better)
Translates to: RRGTLPHSGLDISTPATWEEFMG*CSIYGR
Trigger: TCTTCCATATATGCTACAGCACCCCATGAATTCTTC...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AGAGGATCTCTGGTTTGCTTTATCGAGGTAGTGTCCAGGGTTGGAAGGTCATCACTCTGTGCCTGGTATTaGTCAGGTTCAGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: RGSLVCFIEVVSRVGRSSLCAWY*SGSDLA
Trigger: AGCCAAGTCTGAACCTGAGCAATACCAGGCACAGAG...TGATGACCTTCCAACCCTGGACACTACCTCGATAAAGCAAACCAGAGATCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp TACAAGACAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTAGTAGACACCTCTCTGTaGCTGGTATTGCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: YKTAGCLKDVVPPSDKQVVDTSL*LVLLRF
Trigger: GAACCTGAGCAATACCAGGCACAGAGAGGTGTCTAC...TACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTGTCTTGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTCACCTGGCCACTTGCTaGCTAAACCAATCACAGCTT +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSHLATC*LNQSQL
Trigger: AAGCTGTGATTGGTTTAGGCAGCAAGTGGCCAGGTG...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTAGCATGACAGCTGCCTaGCCTACACTGAGTCTACTT +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSSMTAA*PTLSLL
Trigger: AAGTAGACTCAGTGTAGGGCAGGCAGCTGTCATGCT...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAGAGGGGTTGGGGTTGTaGCTGTGTTCACCACAGAAG +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQEGLGL*LCSPQK
Trigger: CTTCTGTGGTGAACACAGCCACAACCCCAACCCCTC...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTGCTGTCTCAAGGATGTaGTTCCTCCAAGTGACAAGC +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSAVSRM*FLQVTS
Trigger: GCTTGTCACTTGGAGGAACCACATCCTTGAGACAGC...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGTCCTGGCTTTCAATCTaGGGATCATCAATATGTAAA +
Preference number: 4 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWSWLSI*GSSICK
Trigger: TTTACATATTGATGATCCCCAGATTGAAAGCCAGGA...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp AGAGGATCTCTGGTTTGCTTTATCGAGGTAGTGTCCAGGGTTGGAAGGTCATCAACACCTCTCTGTGCCTaGTATTGCTCAGGTTCAGAC +
Preference number: 4 (lower is better)
Translates to: RGSLVCFIEVVSRVGRSSTPLCA*YCSGSD
Trigger: GTCTGAACCTGAGCAATACCAGGCACAGAGAGGTGT...TGATGACCTTCCAACCCTGGACACTACCTCGATAAAGCAAACCAGAGATCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAGGAAGCCGGGCAGCATaGGCTCCTTTGGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIGSRAA*APLEIQ
Trigger: CTGAATCTCCAAAGGAGCCCATGCTGCCCGGCTTCC...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTTTACAGGATTCATATTaGTTGGAGGGGTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICLQDSY*LEGLGL
Trigger: CAACCCCAACCCCTCCAATCAATATGAATCCTGTAA...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACAGGCGGAGGAGAGTCTaGGAACTAAGGAAATGCTCA +
Preference number: 4 (lower is better)
Translates to: IGALRQVTDREGAHTVSNRRRRV*ELRKCS
Trigger: TGAGCATTTCCTTAGTTCTCAGACTCTCCTCCGCCT...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGGAAGTTCCCCAAACTTaGAAAAGTAATCTGCCTAAA +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKEVPQT*KSNLPK
Trigger: TTTAGGCAGATTACTTTTTCAAGTTTGGGGAACTTC...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGGGGGTGGGAGGTAAGTaGTTTAGCCTGGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLGVGGK*FSLGTQ
Trigger: CTGAGTTCCCAGGCTAAATCACTTACCTCCCACCCC...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp CAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTTCAGAAGTTTCCTACTaGAGACATACAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: QQAVSRMWFLQVTSKYSSSEVSY*RHTRQQ
Trigger: CTGCTGTCTTGTATGTCTTCAGTAGGAAACTTCTGA...AGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTTCTCACCAGAGAAGCTaGCGTAGTGTGAAAGTAACC +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSSHQRS*RSVKVT
Trigger: GGTTACTTTCACACTACGTCAGCTTCTCTGGTGAGA...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAACATTGCTTGGCATCATaGGGGATGAACGACGACTGG +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQHCLAS*GMNDDW
Trigger: CCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATG...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGAAGGATGGTGGTATTTaGTTAATACTGGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RRGTLPHSGLDISTPATWKDGGI*LILVFL
Trigger: CAGGAAAACCAGTATTAAGCAAATACCACCATCCTT...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp CAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTAAGAATGTTCCAGGATaGTGGCATTTTGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: QQAVSRMWFLQVTSKYSSKNVPG*WHFEGT
Trigger: AGTGCCTTCAAAATGCCAGCATCCTGGAACATTCTT...AGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTTTCTACCTCCTTTCTTaGCCCATCCTCACTTCCTAT +
Preference number: 4 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICFYLLS*PILTSY
Trigger: ATAGGAAGTGAGGATGGGGCAAGAAAGGAGGTAGAA...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAGTGGAGAAGCCTGCCTaGTCTGCCTTTAGCACACAA +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQVEKPA*SAFSTQ
Trigger: TTGTGTGCTAAAGGCAGAGCAGGCAGGCTTCTCCAC...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACCCAGAGTTCCCCCAGTaGTCTTGTTCCTCCTATAGA +
Preference number: 4 (lower is better)
Translates to: IGALRQVTDREGAHTVSNPEFPQ*SCSSYR
Trigger: TCTATAGGAGGAACAAGAGCACTGGGGGAACTCTGG...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAGTTTCTAACCTGGAGTaGCCGTTGCACTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQVSNLE*PLHWSG
Trigger: TCCTGACCAGTGCAACGGGCACTCCAGGTTAGAAAC...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAGCACATTCACGGGGCTaGTCACCCGAAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIAHSRG*SPESTS
Trigger: AGAAGTGCTTTCGGGTGACCAGCCCCGTGAATGTGC...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp TACAAGACAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTAAGGATTCATATTGATTaGAGGGGTTGGGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: YKTAGCLKDVVPPSDKQVRIHID*RGWGCG
Trigger: GCCACAACCCCAACCCCTCCAATCAATATGAATCCT...TACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTGTCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGACTCTTAAAGAGAGCTaGAGGTGGCGGGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLTLKES*RWREVR
Trigger: CCTCACCTCCCGCCACCTCCAGCTCTCTTTAAGAGT...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAACTCTTAAAGAGAGCTaGAGGTGGCGGGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: HQSLLGIMRDERRLDFVITLKES*RWREVR
Trigger: CCTCACCTCCCGCCACCTCCAGCTCTCTTTAAGAGT...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGTTCATTCAGAGGAGCTaGATATTCCAGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKFIQRS*IFQKQL
Trigger: AAGTTGTTTCTGGAATATCCAGCTCCTCTGAATGAA...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAGATCTGTTGATTCAGTaGCACTGGCGAAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQDLLIQ*HWRSSW
Trigger: CCAAGAGCTTCGCCAGTGTCACTGAATCAACAGATC...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp AATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGAGACGGCCTATCCCCTCTTTaGGGAGAAGTCTGGGATATA +
Preference number: 4 (lower is better)
Translates to: NVPGCWHFEGTQKQSERDGLSPL*GEVWDI
Trigger: TATATCCCAGACTTCTCCTCAAAGAGGGGATAGGCC...GTCTCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTGCTGGCACCAAAAGCTaGAAAGAATTCCTTACCATA +
Preference number: 4 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICAGTKS*KEFLTI
Trigger: TATGGTAAGGAATTCTTTTCAGCTTTTGGTGCCAGC...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAAGGGGTGGGAGGTAAGTaGTTTAGCCTGGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKGVGGK*FSLGTQ
Trigger: CTGAGTTCCCAGGCTAAATCACTTACCTCCCACCCC...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCAGCACTTTCGGAGGCTaGGGTGGGCGGATCACAAGG +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSSTFGG*GGRITR
Trigger: CCTTGTGATCCGCCCACCTCAGCCTCCGAAAGTGCT...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTCACCGACTCCCTCTGTaGACGCTCACACATGGGGAC +
Preference number: 4 (lower is better)
Translates to: HYILSSFPEDHKSQVKESHRLPL*TLTHGD
Trigger: GTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTG...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTAGAGGATCTCTGGTTTaGTTTATCGAGGTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSRGSLV*FIEVVS
Trigger: GGACACTACCTCGATAAAGCAAACCAGAGATCCTCT...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAACCTGGAGTGCCCGTTaGACTGGTCAGGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQTWSAR*TGQEEV
Trigger: CACTTCCTCCTGACCAGTGCAACGGGCACTCCAGGT...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGCACATTCACGGGGCTaGTCACCCGAAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: SVINTLALLFSLSYNKLLAHSRG*SPESTS
Trigger: AGAAGTGCTTTCGGGTGACCAGCCCCGTGAATGTGC...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR CAA 72 bp ATGGCTTCCATAGAAAGTGTAGAGAGGATCTCTGGTTaGCTTTATCGAGGTAGTGTCCAGGGTTGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: MASIESVERISG*LYRGSVQGWKV
Trigger: GACCTTCCAACCCTGGACACTACCTCGATAAAGCAAACCAGAGATCCTCTCTACACTTTCTATGGAAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGAAGGAAGATGGCACTTaGCCACGACGGCTATCTTCT +
Preference number: 4 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLKEDGT*PRRLSS
Trigger: AGAAGATAGCCGTCGTGGTCAAGTGCCATCTTCCTT...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTTCACTCTGGCCTCTATaGTTTAAAGGCTCACTCTTA +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSSLWPL*FKGSLL
Trigger: TAAGAGTGAGCCTTTAAATCATAGAGGCCAGAGTGA...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp ACTTTTATGGCTTCCATAGAAAGTGTAGAGAGGATCTCTGGTTTGCTTTATCGAGCCCCATTCTGGACTTaGCATAAGTACCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TFMASIESVERISGLLYRAPFWT*HKYPSH
Trigger: GTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGC...TCGATAAAGCAAACCAGAGATCCTCTCTACACTTTCTATGGAAGCCATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAATGTGCCCAATATGAATaGTCATGTGGGAGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQCAQYE*SCGSVA
Trigger: AGCTACGCTCCCACATGAGCATTCATATTGGGCACA...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACGCTAACGTACTTTATTaGTCCCTTGTGGACAAAGCC +
Preference number: 4 (lower is better)
Translates to: IGALRQVTDREGAHTVSNANVLY*SLVDKA
Trigger: GGCTTTGTCCACAAGGGAGCAATAAAGTACGTTAGC...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp ACTTTTATGGCTTCCATAGAAAGTGTAGAGAGGATCTCTGGTTTGCTTTATCGACATTCCAGGTGTAAATaGCTCCCGGCTCTACAGGGG +
Preference number: 4 (lower is better)
Translates to: TFMASIESVERISGLLYRHSRCK*LPALQG
Trigger: CCCCTGTAGAGCCGGGAGGCATTTACACCTGGAATG...TCGATAAAGCAAACCAGAGATCCTCTCTACACTTTCTATGGAAGCCATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTAGGAGAGGGACACTaGCCCATTCTGGACTTGACA +
Preference number: 4 (lower is better)
Translates to: SVINTLALLFSLSYNKLLVGEGH*PILDLT
Trigger: TGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCTAC...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAGCTCCTGACAAGAACTaGCTGTGTGGCTCATTGGTA +
Preference number: 4 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIAPDKN*LCGSLV
Trigger: TACCAATGAGCCACACAGCCAGTTCTTGTCAGGAGC...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp AAGAATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGAGTTGTAAGTGGGATCTaGACAGCAGGTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: KNVPGCWHFEGTQKQSERVVSGI*TAGGTF
Trigger: GAATGTGCCACCTGCTGTCCAGATCCCACTTACAAC...TCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAATTGATTGGAGGGGTTaGGGTTGTGGCTGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIIDWRG*GCGCVH
Trigger: GTGAACACAGCCACAACCCCAACCCCTCCAATCAAT...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp CAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTGTTTTGAAGAATTCATaGGGTGCTGTAGCATATATG +
Preference number: 4 (lower is better)
Translates to: QQAVSRMWFLQVTSKYSSVLKNS*GAVAYM
Trigger: CATATATGCTACAGCACCCCATGAATTCTTCAAAAC...AGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTGAGCTGCAAGGGACTTaGGAGCATCTTATCCGGGCC +
Preference number: 4 (lower is better)
Translates to: HYILSSFPEDHKSQVKESELQGT*EHLIRA
Trigger: GGCCCGGATAAGATGCTCCCAAGTCCCTTGCAGCTC...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTGGTAGTGTCCAGGGTTaGAAGGTCATCATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSGSVQG*KVIILY
Trigger: ATAAAGAATGATGACCTTCCAACCCTGGACACTACC...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp TACAAGACAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTAAATGTTCCAGGATGCTaGCATTTTGAAGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: YKTAGCLKDVVPPSDKQVNVPGC*HFEGTQ
Trigger: TTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATT...TACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTGTCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATACTCTCCGTTGTTTTATaGCCTGGGACCCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HQSLLGIMRDERRLDFVILSVVL*PGTLKR
Trigger: TCTCTTCAGGGTCCCAGGCCATAAAACAACGGAGAG...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAAGCGACTGGAAAGCTATaGGAACACTTCTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKATGKL*EHFSGA
Trigger: TGCCCCTGAGAAGTGTTCCCATAGCTTTCCAGTCGC...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR CAA 72 bp CCGATTAGTACAAAGGAAACCAGGCCTATCCCCTCTTaGAGGAGAAGTCTGGGATATAAAAGCAAGCATACC +
Preference number: 4 (lower is better)
Translates to: PISTKETRPIPS*RRSLGYKSKHT
Trigger: GGTATGCTTGCTTTTATATCCCAGACTTCTCCTCAAAGAGGGGATAGGCCTGGTTTCCTTTGTACTAATCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAACATGCAAGCTTTAGGTaGCTTCCCTGGAAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQHASFR*LPWKRP
Trigger: GGGCCTTTTCCAGGGAAGTCACCTAAAGCTTGCATG...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTCTATCTGACTCAATTTaGGAAAGCAGCAGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSLSDSI*ESSSLY
Trigger: ATAAAGGCTGCTGCTTTCTCAAATTGAGTCAGATAG...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACCTGTGTTTTACTAACTaGAACCTGCAAGATGGGGTA +
Preference number: 4 (lower is better)
Translates to: IGALRQVTDREGAHTVSNLCFTN*NLQDGV
Trigger: TACCCCATCTTGCAGGTTTCAGTTAGTAAAACACAG...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp AATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGAGACCTGACCTGTTTGTTGTaGAGATGCTGCTGCAATAAG +
Preference number: 4 (lower is better)
Translates to: NVPGCWHFEGTQKQSERDLTCLL*RCCCNK
Trigger: CTTATTGCAGCAGCATCTTCACAACAAACAGGTCAG...GTCTCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACTCCCAGGTTGATTACTaGCCTGTTTGTTGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: IGALRQVTDREGAHTVSNSQVDY*PVCCED
Trigger: ATCTTCACAACAAACAGGTCAGTAATCAACCTGGGA...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTGCCCCATTCTGGACTTaGCATAAGTACCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFAPFWT*HKYPSH
Trigger: GTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGC...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAACTGCCTGCCCTACACTaGGTCTACTTGACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKLPALH*VYLTFN
Trigger: ATTGAAGGTCAAGTAGACTCAGTGTAGGGCAGGCAG...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAATCTTCCTTAACAGCATaGACGTCAGACACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQSSLTA*TSDTAL
Trigger: AAGAGCAGTGTCTGACGTGCATGCTGTTAAGGAAGA...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGAAACTTGTCATGGAATaGCAAGGAGACTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLKLVME*QGDCGG
Trigger: CCCTCCACAGTCTCCTTGGCATTCCATGACAAGTTT...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAACAGGATGTCTATCATaGTCATCAGACGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQTGCLS*SSDGPF
Trigger: AAAGGGACCGTCTGATGAGCATGATAGACATCCTGT...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGTAAGTGGGATCTaGACAGCAGGTGGCACATTC +
Preference number: 4 (lower is better)
Translates to: SVINTLALLFSLSYNKLLVVSGI*TAGGTF
Trigger: GAATGTGCCACCTGCTGTCCAGATCCCACTTACAAC...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCACTCTTAAAGAGAGCTaGAGGTGGCGGGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSTLKES*RWREVR
Trigger: CCTCACCTCCCGCCACCTCCAGCTCTCTTTAAGAGT...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp CAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTATACAATTAATGCTCTaGATTAATCTCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: QQAVSRMWFLQVTSKYSSIQLML*INLTAF
Trigger: GAAGGCTGTGAGATTAATCCAGAGCATTAATTGTAT...AGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAGCTCAACTCTGTAGCTaGCACCAAAAGCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQAQLCS*HQKLKR
Trigger: TCTTTTCAGCTTTTGGTGCCAGCTACAGAGTTGAGC...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp ACTTTTATGGCTTCCATAGAAAGTGTAGAGAGGATCTCTGGTTTGCTTTATCGAGTAGTCCCAGCTACTTaGTTAGCTGAGGCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: TFMASIESVERISGLLYRVVPAT*LAEAGL
Trigger: CAACCCTGCCTCAGCTAACCAAGTAGCTGGGACTAC...TCGATAAAGCAAACCAGAGATCCTCTCTACACTTTCTATGGAAGCCATAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGGCAAGCTCCGCCTCCTaGGTTCAATGTTGTGAATAT +
Preference number: 4 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLASSAS*VQCCEY
Trigger: ATATTCACAACATTGAACCCAGGAGGCGGAGCTTGC...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGCGTTGTTTTATGGCCTaGGACCCTGAAGAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLRCFMA*DPEEKS
Trigger: GCTTTTCTCTTCAGGGTCCCAGGCCATAAAACAACG...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR CAA 72 bp GGGGTAATATTTACTGTCGTCTTTTCCCTTCCCAGGTaGATTACTGACCTGTTTGTTGTGAAGATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GVIFTVVFSLPR*ITDLFVVKMLL
Trigger: CAGCAGCATCTTCACAACAAACAGGTCAGTAATCAACCTGGGAAGGGAAAAGACGACAGTAAATATTACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAGGGACCAGAGTTTCTTaGACGATTTGTTACAGGAAA +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQGTRVS*TICYRK
Trigger: TTTCCTGTAACAAATCGTTCAAGAAACTCTGGTCCC...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATATTACAGGATTCATATTaGTTGGAGGGGTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: HQSLLGIMRDERRLDFVILQDSY*LEGLGL
Trigger: CAACCCCAACCCCTCCAATCAATATGAATCCTGTAA...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAATTAGGGAGCCTCTCTTaGGTGTTAAGCAGAGATGTC +
Preference number: 4 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKLGSLS*VLSRDV
Trigger: GACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAA...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGGTGACTGAGATGAAATaGTCTCCACTACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLVTEMK*SPLLPP
Trigger: AGGAGGAAGTAGTGGAGATCATTTCATCTCAGTCAC...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp AAGAATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGAGTGACTGAGATGAAATaGTCTCCACTACTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KNVPGCWHFEGTQKQSERVTEMK*SPLLPP
Trigger: AGGAGGAAGTAGTGGAGATCATTTCATCTCAGTCAC...TCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTAACTTTCAAATGCAATaGAACAGTCTTGAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSNFQMQ*NSLESC
Trigger: ACAGGACTCAAGACTGTTTCATTGCATTTGAAAGTT...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTGGCCTTCATCCTTATaGCCTAGCAGGCAGAACAGG +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSWPSSL*PSRQNR
Trigger: CCTGTTCTGCCTGCTAGGTCATAAGGATGAAGGCCA...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCCCTGTGAATAGCCACTaGACTCTAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSPVNSH*TLAWAT
Trigger: TGTTGCCCAGGCTAGAGTGCAGTGGCTATTCACAGG...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAGCTTGGGTACCTGGGTaGTCAAAGAATGTGTACAAA +
Preference number: 4 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIAWVPG*SKNVYK
Trigger: TTTGTACACATTCTTTGAGCACCCAGGTACCCAAGC...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTGTTTCATCACGGAGGTaGTCGATCATATTATATAAA +
Preference number: 4 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICVSSRR*SIILYK
Trigger: TTTATATAATATGATCGAGCACCTCCGTGATGAAAC...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp ACTTTTATGGCTTCCATAGAAAGTGTAGAGAGGATCTCTGGTTTGCTTTATCGAGTAGACACCTCTCTGTaGCTGGTATTGCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: TFMASIESVERISGLLYRVDTSL*LVLLRF
Trigger: GAACCTGAGCAATACCAGGCACAGAGAGGTGTCTAC...TCGATAAAGCAAACCAGAGATCCTCTCTACACTTTCTATGGAAGCCATAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAATTGCACCTGGCCACTTaGTGCCTAAACCAATCACAG +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQLHLAT*CLNQSQ
Trigger: CTGTGATTGGTTTAGGCAGCAAGTGGCCAGGTGCAA...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAGGTCAAGTTCTTGGTTaGCACCATGATAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQGQVLG*HHDKRK
Trigger: CTTCCTTTTATCATGGTGCCAACCAAGAACTTGACC...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAGGTTTCGCATGTAAATaGCATGTCTTTTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQGFACK*HVFCVC
Trigger: GCACACACAAAAGACATGCCATTTACATGCGAAACC...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp ACTTTTATGGCTTCCATAGAAAGTGTAGAGAGGATCTCTGGTTTGCTTTATCGAATTGATTGGAGGGGTTaGGGTTGTGGCTGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: TFMASIESVERISGLLYRIDWRG*GCGCVH
Trigger: GTGAACACAGCCACAACCCCAACCCCTCCAATCAAT...TCGATAAAGCAAACCAGAGATCCTCTCTACACTTTCTATGGAAGCCATAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAATATACTGTGAAACATaGCCAGCTCAACTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQIYCET*PAQLCS
Trigger: GCTACAGAGTTGAGCTGGCCATGTTTCACAGTATAT...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAGTAAGTGATTTAGCCTaGGAACTCAGTTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQVSDLA*ELSSLR
Trigger: TCTGAGAGAACTGAGTTCCCAGGCTAAATCACTTAC...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp AATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGAGACTTGACAAACTTGTCATaGAATGCCAAGGAGACTGTG +
Preference number: 4 (lower is better)
Translates to: NVPGCWHFEGTQKQSERDLTNLS*NAKETV
Trigger: CACAGTCTCCTTGGCATTCCATGACAAGTTTGTCAA...GTCTCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTCTGAAACCTGCAAGATaGGGTAAATATACATATATC +
Preference number: 4 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICLKPAR*GKYTYI
Trigger: GATATATGTATATTTACCCCATCTTGCAGGTTTCAG...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTTTCATTCAGAGGAGCTaGATATTCCAGAAACAACTT +
Preference number: 4 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSFIQRS*IFQKQL
Trigger: AAGTTGTTTCTGGAATATCCAGCTCCTCTGAATGAA...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGGGCCTATCCCCTCTTTaGGGAGAAGTCTGGGATATA +
Preference number: 4 (lower is better)
Translates to: NLSSHLNFSATISNVMFVGLSPL*GEVWDI
Trigger: TATATCCCAGACTTCTCCTCAAAGAGGGGATAGGCC...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACAAATCTAACTCCGAATaGGCCTATCTGACTCAATTT +
Preference number: 4 (lower is better)
Translates to: IGALRQVTDREGAHTVSNKSNSE*AYLTQF
Trigger: AAATTGAGTCAGATAGGCTCATTCGGAGTTAGATTT...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGAGGAAAAGTGCAAGTaGTCTCAGTACTGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQEEKCK*SQYCWG
Trigger: TCCCCAACAGTACTGAGATCACTTGCACTTTTCCTC...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGATCTTTTCTGTCTCCTaGCACATTGTGAGCGCTCCG +
Preference number: 4 (lower is better)
Translates to: NLSSHLNFSATISNVMFVIFSVS*HIVSAP
Trigger: CGGAGCGCTCACAATGTGGCAGGAGACAGAAAAGAT...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362063.6
CDS-3UTR GCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAATGTGCCCAATATGAATaGTCATGTGGGAGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQCAQYE*SCGSVA
Trigger: AGCTACGCTCCCACATGAGCATTCATATTGGGCACA...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGCTTGGGTACCTGGGTaGTCAAAGAATGTGTACAAA +
Preference number: 4 (lower is better)
Translates to: SVINTLALLFSLSYNKLLAWVPG*SKNVYK
Trigger: TTTGTACACATTCTTTGAGCACCCAGGTACCCAAGC...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGCCAGAGTTCCCCCAGTaGTCTTGTTCCTCCTATAGA +
Preference number: 4 (lower is better)
Translates to: NLSSHLNFSATISNVMFVPEFPQ*SCSSYR
Trigger: TCTATAGGAGGAACAAGAGCACTGGGGGAACTCTGG...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCCACCTGGCCACTTGCTaGCTAAACCAATCACAGCTT +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSHLATC*LNQSQL
Trigger: AAGCTGTGATTGGTTTAGGCAGCAAGTGGCCAGGTG...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTTTGCACCTGGCCACTTaGTGCCTAAACCAATCACAG +
Preference number: 4 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFLHLAT*CLNQSQ
Trigger: CTGTGATTGGTTTAGGCAGCAAGTGGCCAGGTGCAA...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTAGCATGACAGCTGCCTaGCCTACACTGAGTCTACTT +
Preference number: 4 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFSMTAA*PTLSLL
Trigger: AAGTAGACTCAGTGTAGGGCAGGCAGCTGTCATGCT...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGGCTCCTGACAAGAACTaGCTGTGTGGCTCATTGGTA +
Preference number: 4 (lower is better)
Translates to: NLSSHLNFSATISNVMFVAPDKN*LCGSLV
Trigger: TACCAATGAGCCACACAGCCAGTTCTTGTCAGGAGC...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTGCTCCTGACAAGAACTaGCTGTGTGGCTCATTGGTA +
Preference number: 4 (lower is better)
Translates to: HYILSSFPEDHKSQVKESAPDKN*LCGSLV
Trigger: TACCAATGAGCCACACAGCCAGTTCTTGTCAGGAGC...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAAATGATAAAAGGAAGATaGCACTTGACCACGACGGCT +
Preference number: 4 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKMIKGR*HLTTTA
Trigger: AGCCGTCGTGGTCAAGTGCCATCTTCCTTTTATCAT...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAGGTCAAGTTCTTGGTTaGCACCATGATAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIGQVLG*HHDKRK
Trigger: CTTCCTTTTATCATGGTGCCAACCAAGAACTTGACC...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCATTGATTGGAGGGGTTaGGGTTGTGGCTGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSIDWRG*GCGCVH
Trigger: GTGAACACAGCCACAACCCCAACCCCTCCAATCAAT...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAATGCAGTAACCTGGTCTaGAGACCCTCTCAGATACAT +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQCSNLV*RPSQIH
Trigger: ATGTATCTGAGAGGGTCTCCAGACCAGGTTACTGCA...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAACTTTCCTTATTGGCTTaGGTACCTGGGTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQLSLLA*VPGCSK
Trigger: CTTTGAGCACCCAGGTACCCAAGCCAATAAGGAAAG...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGCAAGCTCCGCCTCCTaGGTTCAATGTTGTGAATAT +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQASSAS*VQCCEY
Trigger: ATATTCACAACATTGAACCCAGGAGGCGGAGCTTGC...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAAAAGTAACCTGCGACTaGAAAGCTATGGGAACACTT +
Preference number: 4 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIKVTCD*KAMGTL
Trigger: AAGTGTTCCCATAGCTTTCCAGTCGCAGGTTACTTT...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAAACAACTTGACTCTTTaGCACATCCAGTACAGACAC +
Preference number: 4 (lower is better)
Translates to: HQSLLGIMRDERRLDFVINNLTL*HIQYRH
Trigger: GTGTCTGTACTGGATGTGCCAAAGAGTCAAGTTGTT...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTACACCTCTCTGTGCCTaGTATTGCTCAGGTTCAGAC +
Preference number: 4 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFTPLCA*YCSGSD
Trigger: GTCTGAACCTGAGCAATACCAGGCACAGAGAGGTGT...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp TACAAGACAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTAACATTAGCATTAAGTTaGTTACCGTACACATCCAAA +
Preference number: 4 (lower is better)
Translates to: YKTAGCLKDVVPPSDKQVTLALS*LPYTSK
Trigger: TTTGGATGTGTACGGTAACCAACTTAATGCTAATGT...TACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTGTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR CAA 72 bp AGGTTGAGAATAAAGCTAACGTACTTTATTGCTCCCTaGTGGACAAAGCCAGAACTGCTGATGGAAAACAGT +
Preference number: 4 (lower is better)
Translates to: RLRIKLTYFIAP*WTKPELLMENS
Trigger: ACTGTTTTCCATCAGCAGTTCTGGCTTTGTCCACAAGGGAGCAATAAAGTACGTTAGCTTTATTCTCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTTCCCTTGGATCTGTTaGTTCAGTGACACTGGCGAA +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSFPWIC*FSDTGE
Trigger: TTCGCCAGTGTCACTGAATCAACAGATCCAAGGGAA...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTTTAGGGAGCCTCTCTTaGGTGTTAAGCAGAGATGTC +
Preference number: 4 (lower is better)
Translates to: HYILSSFPEDHKSQVKESLGSLS*VLSRDV
Trigger: GACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAA...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp AAGAATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGACCAGGAAGTATGTCTTaGTATACTTTTCTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: KNVPGCWHFEGTQKQSERPGSMS*YTFLPH
Trigger: ATGAGGCAGAAAAGTATATCAAGACATACTTCCTGG...TCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCCAAAGCCAGAACTGCTaGTGGAAAACAGTCACACAG +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSQSQNC*WKTVTQ
Trigger: CTGTGTGACTGTTTTCCATCAGCAGTTCTGGCTTTG...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp AAGAATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGATACATGAATAAGCTTTaGGCTAAGAGGCTATTCCAG +
Preference number: 4 (lower is better)
Translates to: KNVPGCWHFEGTQKQSERYMNKL*AKRLFQ
Trigger: CTGGAATAGCCTCTTAGCTCAAAGCTTATTCATGTA...TCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAATTTCCCTTCCCAGGTTaGTTACTGACCTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQFPFPG*LLTCLL
Trigger: CAACAAACAGGTCAGTAATCAACCTGGGAAGGGAAA...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTTACACTGAGTCTACTTaGCCTTCAATTGCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: HYILSSFPEDHKSQVKESYTEST*PSIASP
Trigger: CGGAGACGCAATTGAAGGTCAAGTAGACTCAGTGTA...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAATTGGAGGCTGTAGTGTaGTATAACTGCACCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQLEAVV*YNCTCE
Trigger: TTCACAGGTGCAGTTATAGCACACTACAGCCTCCAA...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCAAACTTGTCATGGAATaGCAAGGAGACTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSKLVME*QGDCGG
Trigger: CCCTCCACAGTCTCCTTGGCATTCCATGACAAGTTT...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGGAAGAATTCATGGGGTaGTGTAGCATATATGGAAGA +
Preference number: 4 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLEEFMG*CSIYGR
Trigger: TCTTCCATATATGCTACAGCACCCCATGAATTCTTC...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGCATTGCTGTCATCTGTaGCCTCTTCCTCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: NLSSHLNFSATISNVMFVHCCHL*PLPHSL
Trigger: AAGAGAGTGAGGAAGAGGCCACAGATGACAGCAATG...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAAGGTTTCGCATGTAAATaGCATGTCTTTTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKGFACK*HVFCVC
Trigger: GCACACACAAAAGACATGCCATTTACATGCGAAACC...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTAGGATTCATATTGATTaGAGGGGTTGGGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: HYILSSFPEDHKSQVKESRIHID*RGWGCG
Trigger: GCCACAACCCCAACCCCTCCAATCAATATGAATCCT...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCAGGATTCATATTGATTaGAGGGGTTGGGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSRIHID*RGWGCG
Trigger: GCCACAACCCCAACCCCTCCAATCAATATGAATCCT...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTTGCAGTAACCTGGTCTaGAGACCCTCTCAGATACAT +
Preference number: 4 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFCSNLV*RPSQIH
Trigger: ATGTATCTGAGAGGGTCTCCAGACCAGGTTACTGCA...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCAAATTGGAGAGGGGGTaGGAGGTAAGTGATTTAGCC +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSKLERG*EVSDLA
Trigger: GGCTAAATCACTTACCTCCCACCCCCTCTCCAATTT...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAATTGACAAACTTGTCATaGAATGCCAAGGAGACTGTG +
Preference number: 4 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKLTNLS*NAKETV
Trigger: CACAGTCTCCTTGGCATTCCATGACAAGTTTGTCAA...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACTCATGGCAAGCAAACTaGATTTTCTTAAGAAATGAG +
Preference number: 4 (lower is better)
Translates to: IGALRQVTDREGAHTVSNSWQAN*IFLRNE
Trigger: CTCATTTCTTAAGAAAATCCAGTTTGCTTGCCATGA...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR TCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAATCACTCTGGCCTCTATaGTTTAAAGGCTCACTCTTA +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQSLWPL*FKGSLL
Trigger: TAAGAGTGAGCCTTTAAATCATAGAGGCCAGAGTGA...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp ACTTTTATGGCTTCCATAGAAAGTGTAGAGAGGATCTCTGGTTTGCTTTATCGATCACTCTGGCCTCTATaGTTTAAAGGCTCACTCTTA +
Preference number: 4 (lower is better)
Translates to: TFMASIESVERISGLLYRSLWPL*FKGSLL
Trigger: TAAGAGTGAGCCTTTAAATCATAGAGGCCAGAGTGA...TCGATAAAGCAAACCAGAGATCCTCTCTACACTTTCTATGGAAGCCATAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAAGGAGTCATTATATTCTaGGTAGTTTTCCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKGVIIF*VVFLKT
Trigger: GGTCTTCAGGAAAACTACTCAGAATATAATGACTCC...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAATGTACAGATAAGGGCTaGGAACTCAAACTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQCTDKG*ELKLLH
Trigger: ATGGAGAAGTTTGAGTTCTCAGCCCTTATCTGTACA...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCCCGAATGAGCCTATCTaGCTCAATTTGAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSPNEPI*LNLRKQ
Trigger: CTGCTTTCTCAAATTGAGTCAGATAGGCTCATTCGG...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAAGAAAGGAAAAATGCTaGCTAAGGCCCAAATGCTCA +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQRKEKC*LRPKCS
Trigger: TGAGCATTTGGGCCTTAGTCAGCATTTTTCCTTTCT...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTGCAATGAAACAGTCTTaGGTCCTGTACAGGATGTCT +
Preference number: 4 (lower is better)
Translates to: HYILSSFPEDHKSQVKESAMKQS*VLYRMS
Trigger: AGACATCCTGTACAGGACTCAAGACTGTTTCATTGC...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCCATGTCTTTTGTGTGTaGAACCATGTGTTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSHVFCV*NHVFPH
Trigger: GTGCGGAAACACATGGTTGCACACACAAAAGACATG...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGTTGGAGGCTGTAGTGTaGTATAACTGCACCTGTGAA +
Preference number: 4 (lower is better)
Translates to: NLSSHLNFSATISNVMFVLEAVV*YNCTCE
Trigger: TTCACAGGTGCAGTTATAGCACACTACAGCCTCCAA...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGAAGGATGGTGGTATTTaGTTAATACTGGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLKDGGI*LILVFL
Trigger: CAGGAAAACCAGTATTAAGCAAATACCACCATCCTT...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR GCA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAATTTTCCTTTGAATCTTaGAAAACCTATCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQFSFES*KTYPLR
Trigger: TCTCAGAGGATAGGTTTTGCAAGATTCAAAGGAAAA...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTACAGGATGTCTATCATaGTCATCAGACGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFTGCLS*SSDGPF
Trigger: AAAGGGACCGTCTGATGAGCATGATAGACATCCTGT...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGGAGCTGCAAGGGACTTaGGAGCATCTTATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: NLSSHLNFSATISNVMFVELQGT*EHLIFS
Trigger: AGAAAAGATAAGATGCTCCCAAGTCCCTTGCAGCTC...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362063.6
CDS-3UTR CCA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGGTCAAGTTCTTGGTTaGCACCATGATAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQGQVLG*HHDKRK
Trigger: CTTCCTTTTATCATGGTGCCAACCAAGAACTTGACC...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCATTGGCTTGGGTACCTaGGTGCTCAAAGAATGTGTA +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSIGLGT*VLKECV
Trigger: TACACATTCTTTGAGCACCCAGGTACCCAAGCCAAT...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAACTACATATATGCCCTTaGGGAGACAACTTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKLHICP*GDNLRS
Trigger: ACTTCTTAAGTTGTCTCCCCAAGGGCATATATGTAG...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGTTTATTGCTCCCTTGTaGACAAAGCCAGAACTGCTG +
Preference number: 4 (lower is better)
Translates to: NLSSHLNFSATISNVMFVFIAPL*TKPELL
Trigger: CAGCAGTTCTGGCTTTGTCCACAAGGGAGCAATAAA...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGGCTGGCACCAAAAGCTaGAAAGAATTCCTTACCATA +
Preference number: 4 (lower is better)
Translates to: NLSSHLNFSATISNVMFVAGTKS*KEFLTI
Trigger: TATGGTAAGGAATTCTTTTCAGCTTTTGGTGCCAGC...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTTGTACAGATAAGGGCTaGGAACTCAAACTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HYILSSFPEDHKSQVKESCTDKG*ELKLLH
Trigger: ATGGAGAAGTTTGAGTTCTCAGCCCTTATCTGTACA...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTTCCCAGGTTGATTACTaGCCTGTTTGTTGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFSQVDY*PVCCED
Trigger: ATCTTCACAACAAACAGGTCAGTAATCAACCTGGGA...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGCTCATCAGAGCATTTTaGTTTCGGTTAGTATATGAG +
Preference number: 4 (lower is better)
Translates to: SVINTLALLFSLSYNKLLLIRAF*FRLVYE
Trigger: CTCATATACTAACCGAAAGCAAAATGCTCTGATGAG...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGGTAAGTGATTTAGCCTaGGAACTCAGTTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: NLSSHLNFSATISNVMFVVSDLA*ELSSLR
Trigger: TCTGAGAGAACTGAGTTCCCAGGCTAAATCACTTAC...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAAGATACCCACCTTGTGTaGTTATTAGTCTTAAAAACC +
Preference number: 4 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKDTHLV*LLVLKT
Trigger: GGTTTTTAAGACTAATAACCACACAAGGTGGGTATC...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp AAGAATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGAACATTAGCATTAAGTTaGTTACCGTACACATCCAAA +
Preference number: 4 (lower is better)
Translates to: KNVPGCWHFEGTQKQSERTLALS*LPYTSK
Trigger: TTTGGATGTGTACGGTAACCAACTTAATGCTAATGT...TCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR CAA 72 bp ACAGTCATATGCAAGGAATTAACTTTCCTTATTGGCTaGGGTACCTGGGTGCTCAAAGAATGTGTACAAATA +
Preference number: 4 (lower is better)
Translates to: TVICKELTFLIG*GTWVLKECVQI
Trigger: TATTTGTACACATTCTTTGAGCACCCAGGTACCCAAGCCAATAAGGAAAGTTAATTCCTTGCATATGACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
3UTR CAA 72 bp AGTGCTACAGATGACAAAAGCAGGTTAGCTAGGGTGTaGTTATTGCATAATAATGCCACTATTTCTAATGGC +
Preference number: 4 (lower is better)
Translates to: SATDDKSRLARV*LLHNNATISNG
Trigger: GCCATTAGAAATAGTGGCATTATTATGCAATAACAACACCCTAGCTAACCTGCTTTTGTCATCTGTAGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR TCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCGGAGTCATTATATTCTaGGTAGTTTTCCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSGVIIF*VVFLKT
Trigger: GGTCTTCAGGAAAACTACTCAGAATATAATGACTCC...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR TCA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTTACATGAATAAGCTTTaGGCTAAGAGGCTATTCCAG +
Preference number: 4 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFYMNKL*AKRLFQ
Trigger: CTGGAATAGCCTCTTAGCTCAAAGCTTATTCATGTA...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR GCA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCGAATGTATTAACAGCTaGCTTCTTAGATACCCACCT +
Preference number: 4 (lower is better)
Translates to: KYDLLSVINTLALLFSLSECINS*LLRYPP
Trigger: AGGTGGGTATCTAAGAAGGCAGCTGTTAATACATTC...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
3UTR CAA 72 bp CAATTTTGCACTATCTCACCAATAATATCTTTCCTGTaGCCAGACAGGAAAGATGGAGAATGTATTAACAGC +
Preference number: 4 (lower is better)
Translates to: QFCTISPIISFL*PDRKDGECINS
Trigger: GCTGTTAATACATTCTCCATCTTTCCTGTCTGGCAACAGGAAAGATATTATTGGTGAGATAGTGCAAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR GCA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTCATGTGGACCAGCAATaGAATAAAAGTTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFHVDQQ*NKSCLF
Trigger: GAAAAGACAACTTTTATTGCATTGCTGGTCCACATG...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTGTTTTGAAGAATTCATaGGGTGCTGTAGCATATATG +
Preference number: 4 (lower is better)
Translates to: HYILSSFPEDHKSQVKESVLKNS*GAVAYM
Trigger: CATATATGCTACAGCACCCCATGAATTCTTCAAAAC...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGTCCTGGCTTTCAATCTaGGGATCATCAATATGTAAA +
Preference number: 4 (lower is better)
Translates to: NLSSHLNFSATISNVMFVSWLSI*GSSICK
Trigger: TTTACATATTGATGATCCCCAGATTGAAAGCCAGGA...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTATACAATTAATGCTCTaGATTAATCTCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: HYILSSFPEDHKSQVKESIQLML*INLTAF
Trigger: GAAGGCTGTGAGATTAATCCAGAGCATTAATTGTAT...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CCA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTAAGCCCATTGGAATATaGGTGAATTCCAATATTCAT +
Preference number: 4 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFKPIGI*VNSNIH
Trigger: ATGAATATTGGAATTCACCCATATTCCAATGGGCTT...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CCA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTTCATGGCAAGCAAACTaGATTTTCTTAAGAAATGAG +
Preference number: 4 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFSWQAN*IFLRNE
Trigger: CTCATTTCTTAAGAAAATCCAGTTTGCTTGCCATGA...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
3UTR CAA 72 bp CTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTaGAAGTTCCCCAAACTTGAAAAAGTAATCTGCCTA +
Preference number: 4 (lower is better)
Translates to: LSYNKLLVDYGL*KFPKLEKVICL
Trigger: TAGGCAGATTACTTTTTCAAGTTTGGGGAACTTCAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS CCA 90 bp AGGCTCACTCTTAAAGAGAGCTGGAGGTGGCGGGAGGTGAGGGACTaGAGGGATGGGAAGGTGGTGTGGGTGGTGAGGGTGTGGGTGGAT +
Preference number: 5 (lower is better)
Translates to: RLTLKESWRWREVRD*RDGKVVWVVRVWVD
Trigger: ATCCACCCACACCCTCACCACCCACACCACCTTCCCATCCCTCCAGTCCCTCACCTCCCGCCACCTCCAGCTCTCTTTAAGAGTGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGACACTGGCGAAGCTCTaGGTAGAGGCGGAGGAGAGT +
Preference number: 5 (lower is better)
Translates to: MLTDSLCARSHMGTCLLETLAKL*VEAEES
Trigger: ACTCTCCTCCGCCTCTACCAAGAGCTTCGCCAGTGT...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS GCA 90 bp TTTATATTTGATGAAGCTGAGAGAACAGTCACACCTCAGAGATATTaGCGGTTCGGCTCCAGACCACCGGGCCGGCCGCCTCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: FIFDEAERTVTPQRY*RFGSRPPGRPPPPP
Trigger: CGGAGGCGGAGGCGGCCGGCCCGGTGGTCTGGAGCCGAACCGGCAATATCTCTGAGGTGTGACTGTTCTCTCAGCTTCATCAAATATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508237.5
CDS-3UTR CAA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGAACCTGGAGTGCCCGTaGCACTGGTCAGGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWNLECP*HWSGGS
Trigger: ACTTCCTCCTGACCAGTGCAACGGGCACTCCAGGTT...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS CCA 90 bp GGTTGGGGTTGTGGCTGTGTTCACCACAGAAGGAACTGGGGTGGCTaGGGAAGTTGTAAGTGGGATCTGGACAGCAGGTGGCACATTCAC +
Preference number: 5 (lower is better)
Translates to: GWGCGCVHHRRNWGG*GSCKWDLDSRWHIH
Trigger: GTGAATGTGCCACCTGCTGTCCAGATCCCACTTACAACTTCCCCAGCCACCCCAGTTCCTTCTGTGGTGAACACAGCCACAACCCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGTTGGAGGGGTTGGGGTaGTGGCTGTGTTCACCACAG +
Preference number: 5 (lower is better)
Translates to: RRGTLPHSGLDISTPATWLEGLG*WLCSPQ
Trigger: CTGTGGTGAACACAGCCACAACCCCAACCCCTCCAA...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGAGGCCTATCCCCTCTTaGAGGAGAAGTCTGGGATAT +
Preference number: 5 (lower is better)
Translates to: MLTDSLCARSHMGTCLLERPIPS*RRSLGY
Trigger: ATATCCCAGACTTCTCCTCAAAGAGGGGATAGGCCT...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGAGAGCTGCAAGGGACTaGGGAGCATCTTATCCGGGC +
Preference number: 5 (lower is better)
Translates to: RRGTLPHSGLDISTPATWRAARD*GASYPG
Trigger: GCCCGGATAAGATGCTCCCAAGTCCCTTGCAGCTCT...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGCTTACAGGATTCATATaGATTGGAGGGGTTGGGGTT +
Preference number: 5 (lower is better)
Translates to: MLTDSLCARSHMGTCLLELTGFI*IGGVGV
Trigger: AACCCCAACCCCTCCAATCAATATGAATCCTGTAAG...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp CAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTACACTGGCGAAGCTCTaGGTAGAGGCGGAGGAGAGT +
Preference number: 5 (lower is better)
Translates to: QQAVSRMWFLQVTSKYSSTLAKL*VEAEES
Trigger: ACTCTCCTCCGCCTCTACCAAGAGCTTCGCCAGTGT...AGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGATTAGGGAGCCTCTCTaGAGTGTTAAGCAGAGATGT +
Preference number: 5 (lower is better)
Translates to: MLTDSLCARSHMGTCLLEIREPL*SVKQRC
Trigger: ACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAAT...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGAGAGCTGCAAGGGACTaGGGAGCATCTTATCTTCCT +
Preference number: 5 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWRAARD*GASYLP
Trigger: AGGAAGATAAGATGCTCCCAAGTCCCTTGCAGCTCT...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508237.5
CDS-3UTR CAA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGTGGCTGTGTGGCTCATaGGTAAGTGGCCCAATTTAT +
Preference number: 5 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWWLCGS*VSGPIY
Trigger: ATAAATTGGGCCACTTACCAATGAGCCACACAGCCA...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AGAGGATCTCTGGTTTGCTTTATCGAGGTAGTGTCCAGGGTTGGAAGGTCATCAGCAGCATGGGCTCCTTaGGAGATTCAGGAGCGGAGC +
Preference number: 5 (lower is better)
Translates to: RGSLVCFIEVVSRVGRSSAAWAP*EIQERS
Trigger: GCTCCGCTCCTGAATCTCCAAAGGAGCCCATGCTGC...TGATGACCTTCCAACCCTGGACACTACCTCGATAAAGCAAACCAGAGATCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGGGGGAAATCAGTACATaGAGGGATCTGACAGGATGC +
Preference number: 5 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKGEIST*RDLTGC
Trigger: GCATCCTGTCAGATCCCTCAATGTACTGATTTCCCC...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTTTGGAGGGGTTGGGGTaGTGGCTGTGTTCACCACAG +
Preference number: 5 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSLEGLG*WLCSPQ
Trigger: CTGTGGTGAACACAGCCACAACCCCAACCCCTCCAA...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp CAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTAAGTACAGCTCTCCGTaGTTTTATGGCCTGGGACCC +
Preference number: 5 (lower is better)
Translates to: QQAVSRMWFLQVTSKYSSKYSSP*FYGLGP
Trigger: GGGTCCCAGGCCATAAAACAACGGAGAGCTGTACTT...AGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp CAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTGGGGCAGGAACTCCCTaGAATGTGTGTGTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: QQAVSRMWFLQVTSKYSSGAGTP*NVCVRS
Trigger: ACTTCTGACACACACATTCAAGGGAGTTCCTGCCCC...AGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp CTCCTTTGGAGATTCAGGAGCGGAGCTCAGTTCCACCTCACTGCAGTTCCCTGGTGCAATGAAACAGTCTaGAGTCCTGTACAGGATGTC +
Preference number: 5 (lower is better)
Translates to: LLWRFRSGAQFHLTAVPWCNETV*SPVQDV
Trigger: GACATCCTGTACAGGACTCAAGACTGTTTCATTGCA...CCAGGGAACTGCAGTGAGGTGGAACTGAGCTCCGCTCCTGAATCTCCAAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGCCTGACCTAGAGGACTaGTTCCCTGATGTAACAGAT +
Preference number: 5 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKPDLED*FPDVTD
Trigger: ATCTGTTACATCAGGGAACAAGTCCTCTAGGTCAGG...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACGCAGCATGGGCTCCTTaGGAGATTCAGGAGCGGAGC +
Preference number: 5 (lower is better)
Translates to: IGALRQVTDREGAHTVSNAAWAP*EIQERS
Trigger: GCTCCGCTCCTGAATCTCCAAAGGAGCCCATGCTGC...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTAAGTACAGCTCTCCGTaGTTTTATGGCCTGGGACCC +
Preference number: 5 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICKYSSP*FYGLGP
Trigger: GGGTCCCAGGCCATAAAACAACGGAGAGCTGTACTT...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACAACCTGGAGTGCCCGTaGCACTGGTCAGGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: IGALRQVTDREGAHTVSNNLECP*HWSGGS
Trigger: ACTTCCTCCTGACCAGTGCAACGGGCACTCCAGGTT...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AGGAGAGGGACACTGCCCCATTCTGGACTTGACATAAGTACCCCAGCCACATGGATAAAAACAAACAAGTaGCACCTGGCCACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: RRGTLPHSGLDISTPATWIKTNK*HLATCC
Trigger: GCAGCAAGTGGCCAGGTGCAACTTGTTTGTTTTTAT...CCATGTGGCTGGGGTACTTATGTCAAGTCCAGAATGGGGCAGTGTCCCTCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGATAAAAACAAACAAGTaGCACCTGGCCACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKIKTNK*HLATCC
Trigger: GCAGCAAGTGGCCAGGTGCAACTTGTTTGTTTTTAT...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp ATGCTCACCGACTCCCTCTGTGCACGCTCACACATGGGGACGTGTCTCCTGGAGAACATTAGCATTAAGTaGGTTACCGTACACATCCAA +
Preference number: 5 (lower is better)
Translates to: MLTDSLCARSHMGTCLLENISIK*VTVHIQ
Trigger: TTGGATGTGTACGGTAACCAACTTAATGCTAATGTT...CTCCAGGAGACACGTCCCCATGTGTGAGCGTGCACAGAGGGAGTCGGTGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAACTGAGGCAGGGTTGCTaGAACCCAAGAGTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQLRQGC*NPRVGG
Trigger: GCCTCCAACTCTTGGGTTCAAGCAACCCTGCCTCAG...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGACCAGGAAGTATGTCTaGATATACTTTTCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKTRKYV*IYFSAS
Trigger: TGAGGCAGAAAAGTATATCAAGACATACTTCCTGGT...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACTCTCTGTGCCTGGTATaGCTCAGGTTCAGACTTGGC +
Preference number: 5 (lower is better)
Translates to: IGALRQVTDREGAHTVSNSLCLV*LRFRLG
Trigger: GCCAAGTCTGAACCTGAGCAATACCAGGCACAGAGA...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTTGGCTGTGTGGCTCATaGGTAAGTGGCCCAATTTAT +
Preference number: 5 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSWLCGS*VSGPIY
Trigger: ATAAATTGGGCCACTTACCAATGAGCCACACAGCCA...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp TGCTCAGGTTCAGACTTGGCTGGGGGTGAGGTGGCCAGGCAGAAATCAGTTAAGAACATTAGCATTAAGTaGGTTACCGTACACATCCAA +
Preference number: 5 (lower is better)
Translates to: CSGSDLAGGEVARQKSVKNISIK*VTVHIQ
Trigger: TTGGATGTGTACGGTAACCAACTTAATGCTAATGTT...CTTAACTGATTTCTGCCTGGCCACCTCACCCCCAGCCAAGTCTGAACCTGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTCTTACAGGATTCATATaGATTGGAGGGGTTGGGGTT +
Preference number: 5 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSLTGFI*IGGVGV
Trigger: AACCCCAACCCCTCCAATCAATATGAATCCTGTAAG...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGAGACAGGCCTATCCCCTCTTaGAGGAGAAGTCTGGGATAT +
Preference number: 5 (lower is better)
Translates to: NVPGCWHFEGTQKQSERDRPIPS*RRSLGY
Trigger: ATATCCCAGACTTCTCCTCAAAGAGGGGATAGGCCT...GTCTCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTGAAGCACCTTTTGAGTaGTACGGATGTAAGAATAGC +
Preference number: 5 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICEAPFE*YGCKNS
Trigger: GCTATTCTTACATCCGTACAACTCAAAAGGTGCTTC...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp CAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTAGGTTAGCTAGGGTGTaGTTATTGCATAATAATGCC +
Preference number: 5 (lower is better)
Translates to: QQAVSRMWFLQVTSKYSSRLARV*LLHNNA
Trigger: GGCATTATTATGCAATAACAACACCCTAGCTAACCT...AGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGGGGGCAGGAACTCCCTaGAATGTGTGTGTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLGAGTP*NVCVRS
Trigger: ACTTCTGACACACACATTCAAGGGAGTTCCTGCCCC...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTTGCAATGAAACAGTCTaGAGTCCTGTACAGGATGTC +
Preference number: 5 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSCNETV*SPVQDV
Trigger: GACATCCTGTACAGGACTCAAGACTGTTTCATTGCA...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp TACAAGACAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTAGCTACATATATGCCCTaGGGGAGACAACTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: YKTAGCLKDVVPPSDKQVATYMP*GRQLKK
Trigger: CTTCTTAAGTTGTCTCCCCAAGGGCATATATGTAGC...TACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTGTCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTGCTACATATATGCCCTaGGGGAGACAACTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSATYMP*GRQLKK
Trigger: CTTCTTAAGTTGTCTCCCCAAGGGCATATATGTAGC...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp TACAAGACAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTATACTTTATTGCTCCCTaGTGGACAAAGCCAGAACTG +
Preference number: 5 (lower is better)
Translates to: YKTAGCLKDVVPPSDKQVYFIAP*WTKPEL
Trigger: CAGTTCTGGCTTTGTCCACAAGGGAGCAATAAAGTA...TACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTGTCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACCCCACACATCAATCATaGCTTGGCATCATGAGGGAT +
Preference number: 5 (lower is better)
Translates to: IGALRQVTDREGAHTVSNPTHQS*LGIMRD
Trigger: ATCCCTCATGATGCCAAGCAATGATTGATGTGTGGG...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACCCTGACCTAGAGGACTaGTTCCCTGATGTAACAGAT +
Preference number: 5 (lower is better)
Translates to: IGALRQVTDREGAHTVSNPDLED*FPDVTD
Trigger: ATCTGTTACATCAGGGAACAAGTCCTCTAGGTCAGG...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AAAGGCGCCCCTATGGGAAGGTCCTGGCTTTCAATCTGGGGATCATCAATATGTTTTTCCCTTCCCAGGTaGATTACTGACCTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: KGAPMGRSWLSIWGSSICFSLPR*ITDLFV
Trigger: AACAAACAGGTCAGTAATCAACCTGGGAAGGGAAAA...ACATATTGATGATCCCCAGATTGAAAGCCAGGACCTTCCCATAGGGGCGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATATCTCTGTGCCTGGTATaGCTCAGGTTCAGACTTGGC +
Preference number: 5 (lower is better)
Translates to: HQSLLGIMRDERRLDFVISLCLV*LRFRLG
Trigger: GCCAAGTCTGAACCTGAGCAATACCAGGCACAGAGA...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAGTTGCACCTGGCCACTaGCTGCCTAAACCAATCACA +
Preference number: 5 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIVAPGH*LPKPIT
Trigger: TGTGATTGGTTTAGGCAGCAAGTGGCCAGGTGCAAC...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp CAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACAGCTCTCAAGCAGCTTCTATTTaGTCAAACTCCTTTGGACAA +
Preference number: 5 (lower is better)
Translates to: QQAVSRMWFLQVTSKYSSQAASI*SNSFGQ
Trigger: TTGTCCAAAGGAGTTTGACAAAATAGAAGCTGCTTG...AGAGCTGTACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTAGGGACCAGAGTTTCTaGAACGATTTGTTACAGGAA +
Preference number: 5 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSRDQSF*NDLLQE
Trigger: TTCCTGTAACAAATCGTTCAAGAAACTCTGGTCCCT...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTTGGAGGGGTTGGGGTaGTGGCTGTGTTCACCACAG +
Preference number: 5 (lower is better)
Translates to: KYDLLSVINTLALLFSLSLEGLG*WLCSPQ
Trigger: CTGTGGTGAACACAGCCACAACCCCAACCCCTCCAA...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTCTGAGGCAGGGTTGCTaGAACCCAAGAGTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFLRQGC*NPRVGG
Trigger: GCCTCCAACTCTTGGGTTCAAGCAACCCTGCCTCAG...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAACTTTCCTTATTGGCTaGGGTACCTGGGTGCTCAAA +
Preference number: 5 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQTFLIG*GTWVLK
Trigger: TTTGAGCACCCAGGTACCCAAGCCAATAAGGAAAGT...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp ATAGGAGCCCTTAGACAAGTAACTGACAGAGAGGGAGCACACACAGTTTCTAACTGGCGATCTCCCCTCTaGCTAAAAATAAGAATCCAG +
Preference number: 5 (lower is better)
Translates to: IGALRQVTDREGAHTVSNWRSPL*LKIRIQ
Trigger: CTGGATTCTTATTTTTAGCAAGAGGGGAGATCGCCA...GTTAGAAACTGTGTGTGCTCCCTCTCTGTCAGTTACTTGTCTAAGGGCTCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTTATTCCAGAAACAACTaGACTCTTTGGCACATCCAG +
Preference number: 5 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSYSRNN*TLWHIQ
Trigger: CTGGATGTGCCAAAGAGTCAAGTTGTTTCTGGAATA...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGAGACCCCACACATCAATCATaGCTTGGCATCATGAGGGAT +
Preference number: 5 (lower is better)
Translates to: NVPGCWHFEGTQKQSERDPTHQS*LGIMRD
Trigger: ATCCCTCATGATGCCAAGCAATGATTGATGTGTGGG...GTCTCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAGGGGAAATCAGTACATaGAGGGATCTGACAGGATGC +
Preference number: 5 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIGEIST*RDLTGC
Trigger: GCATCCTGTCAGATCCCTCAATGTACTGATTTCCCC...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp GAGCACATTAGGGAGCCTCTCTTGAGTGTTAAGCAGAGATGTCAAAACTACCAAATTAGGGAGCCTCTCTaGAGTGTTAAGCAGAGATGT +
Preference number: 5 (lower is better)
Translates to: EHIREPLLSVKQRCQNYQIREPL*SVKQRC
Trigger: ACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAAT...TTGGTAGTTTTGACATCTCTGCTTAACACTCAAGAGAGGCTCCCTAATGTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp AAGAATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGAACTTTCCTTATTGGCTaGGGTACCTGGGTGCTCAAA +
Preference number: 5 (lower is better)
Translates to: KNVPGCWHFEGTQKQSERTFLIG*GTWVLK
Trigger: TTTGAGCACCCAGGTACCCAAGCCAATAAGGAAAGT...TCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp AAGAATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGACCTTTTTCTCCAGTTTaGGAGGAGAACTGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: KNVPGCWHFEGTQKQSERPFSPV*EENWKG
Trigger: TCCCTTCCAGTTCTCCTCCAAAACTGGAGAAAAAGG...TCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp ACTTTTATGGCTTCCATAGAAAGTGTAGAGAGGATCTCTGGTTTGCTTTATCGAGTTGCACCTGGCCACTaGCTGCCTAAACCAATCACA +
Preference number: 5 (lower is better)
Translates to: TFMASIESVERISGLLYRVAPGH*LPKPIT
Trigger: TGTGATTGGTTTAGGCAGCAAGTGGCCAGGTGCAAC...TCGATAAAGCAAACCAGAGATCCTCTCTACACTTTCTATGGAAGCCATAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGAGAGCTGCAAGGGACTaGGGAGCATCTTATCTTTTC +
Preference number: 5 (lower is better)
Translates to: SVINTLALLFSLSYNKLLRAARD*GASYLF
Trigger: GAAAAGATAAGATGCTCCCAAGTCCCTTGCAGCTCT...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362063.6
CDS-3UTR CAA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATACTCAAGGTAGTCTTCTaGTTCATTCCCTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: HQSLLGIMRDERRLDFVILKVVF*FIPLDL
Trigger: CAGATCCAAGGGAATGAACAAGAAGACTACCTTGAG...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp AGAGAAGGTGAGAAGCATTTCCTTACTCATACTCCAGAGTTCCCCCAGTGCTCTGCTAGGGTGTTGTTATaGCATAATAATGCCACTATT +
Preference number: 5 (lower is better)
Translates to: REGEKHFLTHTPEFPQCSARVLL*HNNATI
Trigger: AATAGTGGCATTATTATGCAATAACAACACCCTAGC...AGAGCACTGGGGGAACTCTGGAGTATGAGTAAGGAAATGCTTCTCACCTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGAGAGGATCTCTGGTTaGCTTTATCGAGGTAGTGTC +
Preference number: 5 (lower is better)
Translates to: SVINTLALLFSLSYNKLLERISG*LYRGSV
Trigger: GACACTACCTCGATAAAGCAAACCAGAGATCCTCTC...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp TACAAGACAGCAGGCTGTCTCAAGGATGTGGTTCCTCCAAGTGACAAGCAAGTACTTTCCACTTTATATTaGATGAAGCTGAGAGAACAG +
Preference number: 5 (lower is better)
Translates to: YKTAGCLKDVVPPSDKQVLSTLY*MKLREQ
Trigger: CTGTTCTCTCAGCTTCATCAAATATAAAGTGGAAAG...TACTTGCTTGTCACTTGGAGGAACCACATCCTTGAGACAGCCTGCTGTCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508237.5
CDS-3UTR CAA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAATGGCTGTGTGGCTCATaGGTAAGTGGCCCAATTTAT +
Preference number: 5 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQWLCGS*VSGPIY
Trigger: ATAAATTGGGCCACTTACCAATGAGCCACACAGCCA...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTAAAGGAAGATGGCACTaGACCACGACGGCTATCTTC +
Preference number: 5 (lower is better)
Translates to: HYILSSFPEDHKSQVKESKGRWH*TTTAIF
Trigger: GAAGATAGCCGTCGTGGTCAAGTGCCATCTTCCTTT...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp GCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGGTTGATTATGGTCTTTTGAGGGACCAGAGTTTCTaGAACGATTTGTTACAGGAA +
Preference number: 5 (lower is better)
Translates to: ALLFSLSYNKLLVDYGLLRDQSF*NDLLQE
Trigger: TTCCTGTAACAAATCGTTCAAGAAACTCTGGTCCCT...CAAAAGACCATAATCAACCAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAACTCAAGGTAGTCTTCTaGTTCATTCCCTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKLKVVF*FIPLDL
Trigger: CAGATCCAAGGGAATGAACAAGAAGACTACCTTGAG...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp AGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCTATAATAAGCTCCTGTGTAGGTTGACAAACTaGTCATGGAATGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: SVINTLALLFSLSYNKLLCRLTN*SWNAKE
Trigger: CTCCTTGGCATTCCATGACAAGTTTGTCAACCTACA...CAGGAGCTTATTATAGGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp AAGAATGTTCCAGGATGCTGGCATTTTGAAGGCACTCAAAAACAGAGTGAGAGATTTTCCCTTCCCAGGTaGATTACTGACCTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: KNVPGCWHFEGTQKQSERFSLPR*ITDLFV
Trigger: AACAAACAGGTCAGTAATCAACCTGGGAAGGGAAAA...TCTCTCACTCTGTTTTTGAGTGCCTTCAAAATGCCAGCATCCTGGAACATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGCTACTTGACCTTCAATaGCGTCTCCGCAGAGAGGTA +
Preference number: 5 (lower is better)
Translates to: NLSSHLNFSATISNVMFVLLDLQ*RLRREV
Trigger: TACCTCTCTGCGGAGACGCAATTGAAGGTCAAGTAG...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTCTACTTGACCTTCAATaGCGTCTCCGCAGAGAGGTA +
Preference number: 5 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFLLDLQ*RLRREV
Trigger: TACCTCTCTGCGGAGACGCAATTGAAGGTCAAGTAG...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATAATAATATCTTTCCTGTaGCCAGACAGGAAAGATGGA +
Preference number: 5 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIIISFL*PDRKDG
Trigger: TCCATCTTTCCTGTCTGGCAACAGGAAAGATATTAT...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp CATCAATCATTGCTTGGCATCATGAGGGATGAACGACGACTGGACTTTGTAATACAAGCAGCTTCTATTTaGTCAAACTCCTTTGGACAA +
Preference number: 5 (lower is better)
Translates to: HQSLLGIMRDERRLDFVIQAASI*SNSFGQ
Trigger: TTGTCCAAAGGAGTTTGACAAAATAGAAGCTGCTTG...TATTACAAAGTCCAGTCGTCGTTCATCCCTCATGATGCCAAGCAATGATTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGAAGCACCTTTTGAGTaGTACGGATGTAAGAATAGC +
Preference number: 5 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQEAPFE*YGCKNS
Trigger: GCTATTCTTACATCCGTACAACTCAAAAGGTGCTTC...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGTGTAGGTTGACAAACTaGTCATGGAATGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: NLSSHLNFSATISNVMFVCRLTN*SWNAKE
Trigger: CTCCTTGGCATTCCATGACAAGTTTGTCAACCTACA...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp CATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTCAAGGAAAGTAGGGACCAGAGTTTCTaGAACGATTTGTTACAGGAA +
Preference number: 5 (lower is better)
Translates to: HYILSSFPEDHKSQVKESRDQSF*NDLLQE
Trigger: TTCCTGTAACAAATCGTTCAAGAAACTCTGGTCCCT...ACTTTCCTTGACTTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp AATTTGTCTTCTCATCTGAATTTCTCAGCCACTATCAGCAATGTCATGTTTGTGTCTCTGAAGCACCTTTaGAGTTGTACGGATGTAAGA +
Preference number: 5 (lower is better)
Translates to: NLSSHLNFSATISNVMFVSLKHL*SCTDVR
Trigger: TCTTACATCCGTACAACTCAAAAGGTGCTTCAGAGA...CACAAACATGACATTGCTGATAGTGGCTGAGAAATTCAGATGAGAAGACAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp GTTGATTCTGTGGTCTCAAGTCTAGAATCCAGAATTGCTGCCCAATACTGTAAAATACGGTCAAAATTCTaGTCCAAGGTTTTAGCTAGT +
Preference number: 5 (lower is better)
Translates to: VDSVVSSLESRIAAQYCKIRSKF*SKVLAS
Trigger: ACTAGCTAAAACCTTGGACAAGAATTTTGACCGTAT...TTTACAGTATTGGGCAGCAATTCTGGATTCTAGACTTGAGACCACAGAATCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430262.3
CDS-3UTR CAA 90 bp AGCTTTGAGCTAAGAGGCTATTCCAGAAGAGATTTAAAAGTGGGATCTTTCTTTTATTCCAGAAACAACTaGACTCTTTGGCACATCCAG +
Preference number: 5 (lower is better)
Translates to: SFELRGYSRRDLKVGSFFYSRNN*TLWHIQ
Trigger: CTGGATGTGCCAAAGAGTCAAGTTGTTTCTGGAATA...AAAGAAAGATCCCACTTTTAAATCTCTTCTGGAATAGCCTCTTAGCTCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430262.3
ENST00000508237.5
CDS-3UTR CAA 90 bp CTGATGAGGAGTCATTATATTCTGAGTAGTTTTCCTGAAGACCACAAGTCTCAAGTTGATTATGGTCTTTaGAAGTTCCCCAAACTTGAA +
Preference number: 5 (lower is better)
Translates to: LMRSHYILSSFPEDHKSQVDYGL*KFPKLE
Trigger: TTCAAGTTTGGGGAACTTCAAAAGACCATAATCAAC...TTGAGACTTGTGGTCTTCAGGAAAACTACTCAGAATATAATGACTCCTCATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS-3UTR CAA 90 bp AAATATGATCTGTTAAGTGTAATCAATACACTAGCCCTTCTGTTCAGCCTTTCCACCAGGAAGTATGTCTaGATATACTTTTCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: KYDLLSVINTLALLFSLSTRKYV*IYFSAS
Trigger: TGAGGCAGAAAAGTATATCAAGACATACTTCCTGGT...GGAAAGGCTGAACAGAAGGGCTAGTGTATTGATTACACTTAACAGATCATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362063.6
ENST00000430262.3
CDS CCA 72 bp CTTAAAGAGAGCTGGAGGTGGCGGGAGGTGAGGGACTaGAGGGATGGGAAGGTGGTGTGGGTGGTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: LKESWRWREVRD*RDGKVVWVVRV
Trigger: CACCCTCACCACCCACACCACCTTCCCATCCCTCCAGTCCCTCACCTCCCGCCACCTCCAGCTCTCTTTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS GCA 72 bp GATGAAGCTGAGAGAACAGTCACACCTCAGAGATATTaGCGGTTCGGCTCCAGACCACCGGGCCGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: DEAERTVTPQRY*RFGSRPPGRPP
Trigger: AGGCGGCCGGCCCGGTGGTCTGGAGCCGAACCGGCAATATCTCTGAGGTGTGACTGTTCTCTCAGCTTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508237.5
CDS CCA 72 bp GGCTGGGGAAGTTGTAAGTGGGATCTGGACAGCAGGTaGCACATTCACGGGGCTGGTCACCCGAAAGCACTT +
Preference number: 6 (lower is better)
Translates to: GWGSCKWDLDSR*HIHGAGHPKAL
Trigger: AAGTGCTTTCGGGTGACCAGCCCCGTGAATGTGCCACCTGCTGTCCAGATCCCACTTACAACTTCCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS CAA 72 bp AGATCCTGCCCTACACTGAGTCTACTTGACCTTCAATaGCGTCTCCGCAGAGAGGTAGGAGAGGGACACTGC +
Preference number: 6 (lower is better)
Translates to: RSCPTLSLLDLQ*RLRREVGEGHC
Trigger: GCAGTGTCCCTCTCCTACCTCTCTGCGGAGACGCAATTGAAGGTCAAGTAGACTCAGTGTAGGGCAGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513488.2
CDS CAA 90 bp CATCTTAAGAGATCCTGCCCTACACTGAGTCTACTTGACCTTCAATaGCGTCTCCGCAGAGAGGTAGGAGAGGGACACTGCCCCATTCTG +
Preference number: 6 (lower is better)
Translates to: HLKRSCPTLSLLDLQ*RLRREVGEGHCPIL
Trigger: CAGAATGGGGCAGTGTCCCTCTCCTACCTCTCTGCGGAGACGCAATTGAAGGTCAAGTAGACTCAGTGTAGGGCAGGATCTCTTAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513488.2
CDS CCA 72 bp AAGAGTGCTTACAGGATTCATATTGATTGGAGGGGTTaGGGTTGTGGCTGTGTTCACCACAGAAGGAACTGG +
Preference number: 6 (lower is better)
Translates to: KSAYRIHIDWRG*GCGCVHHRRNW
Trigger: CCAGTTCCTTCTGTGGTGAACACAGCCACAACCCCAACCCCTCCAATCAATATGAATCCTGTAAGCACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362063.6
ENST00000430262.3
ENST00000508237.5
CDS CAA 90 bp GGTTCATTCAGTGGCTTCATGAACAAAACTCTTTCCACTTTATATTaGATGAAGCTGAGAGAACAGTCACACCTCAGAGATATTGCCGGT +
Preference number: 6 (lower is better)
Translates to: GSFSGFMNKTLSTLY*MKLREQSHLRDIAG
Trigger: ACCGGCAATATCTCTGAGGTGTGACTGTTCTCTCAGCTTCATCAAATATAAAGTGGAAAGAGTTTTGTTCATGAAGCCACTGAATGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508237.5