RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF646 (Homo sapiens)

Ensembl gene IDs: ENSG00000167395

Ensembl transcript IDs: ENST00000300850.5, ENST00000394979.2, ENST00000428260.1, ENST00000564189.1

Found 875 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGCCAGCCCAGGTCCTGCTGAGGGAACCGGCCGCCCCACTCCCTaGCAGCTGCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCA +
Preference number: 1 (lower is better)
Translates to: EASPGPAEGTGRPTP*QLRLPAVLGGGDSP
Trigger: TGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGCAGCTGCCAGGGAGTGGGGCGGCCGGTTCCCTCAGCAGGACCTGGGCTGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR GCA 90 bp GCCCAGGTCCTGCTGAGGGAACCGGCCGCCCCACTCCCTGGCAGCTaGGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGAT +
Preference number: 1 (lower is better)
Translates to: AQVLLREPAAPLPGS*GFQQCWVEAIPHGD
Trigger: ATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGCAGCTGCCAGGGAGTGGGGCGGCCGGTTCCCTCAGCAGGACCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CCA 90 bp CCAACCAGTGAACCAGTTTCCGTGGCCAAGTCAGCAGGGAAGCCGTaGAGCCCATGCCCCATCCCTTGTTCCCTGGCACCCGGCCTGCTC +
Preference number: 1 (lower is better)
Translates to: PTSEPVSVAKSAGKP*SPCPIPCSLAPGLL
Trigger: GAGCAGGCCGGGTGCCAGGGAACAAGGGATGGGGCATGGGCTCCACGGCTTCCCTGCTGACTTGGCCACGGAAACTGGTTCACTGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CCA 90 bp CAAGGCCTGTCAAGGGCCCACCATCTCAGGGCCACCCACCCTCGGTaGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAG +
Preference number: 1 (lower is better)
Translates to: QGLSRAHHLRATHPR*PLDGMGPPLLGEVE
Trigger: CTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCCCTGAGATGGTGGGCCCTTGACAGGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR GCA 90 bp GTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTaGCTGGCCAACATAAGTATGTGGCCCCGGGGCCTCCTGCCAAAC +
Preference number: 1 (lower is better)
Translates to: VYFAEEPEPEAEPGS*LANISMWPRGLLPN
Trigger: GTTTGGCAGGAGGCCCCGGGGCCACATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR TCA 90 bp TTTGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTaGGCCTGGAAGCTGCCTGGCCAACATAAGTATGTGGCCCCGGGG +
Preference number: 1 (lower is better)
Translates to: FGLAGLLRRGTRARG*AWKLPGQHKYVAPG
Trigger: CCCCGGGGCCACATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR TCA 90 bp AGCCATTCCTTCAGCTTTCAGGTGACTCCCACCTGCCCTCTGCTCTaGCAAGGCCTGTCAAGGGCCCACCATCTCAGGGCCACCCACCCT +
Preference number: 1 (lower is better)
Translates to: SHSFSFQVTPTCPLL*QGLSRAHHLRATHP
Trigger: AGGGTGGGTGGCCCTGAGATGGTGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAGCTGAAGGAATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR GCA 90 bp CCTGGCCAACATAAGTATGTGGCCCCGGGGCCTCCTGCCAAACCCTaGCTCTCCAGGACCCTTCTCTCTCCAGTGAGAACGTGCCGTTCT +
Preference number: 1 (lower is better)
Translates to: PGQHKYVAPGPPAKP*LSRTLLSPVRTCRS
Trigger: AGAACGGCACGTTCTCACTGGAGAGAGAAGGGTCCTGGAGAGGCAGGGTTTGGCAGGAGGCCCCGGGGCCACATACTTATGTTGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR TCA 90 bp TTCTGGCTACAGTGTAATGGAGGAGCCCAGGTAGCAGCCTCGGCCTaGCCACGCCCCCACGTGCTGCCCAACCCACCCTGCTATTTGTTA +
Preference number: 1 (lower is better)
Translates to: FWLQCNGGAQVAASA*PRPHVLPNPPCYLL
Trigger: TAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGTGGTCAGGCCGAGGCTGCTACCTGGGCTCCTCCATTACACTGTAGCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR GCA 90 bp AGCCGTGGAGCCCATGCCCCATCCCTTGTTCCCTGGCACCCGGCCTaGTCCAGGAAAGAATGGAACCTAGACCAAACCAATGGCTTCCTC +
Preference number: 1 (lower is better)
Translates to: SRGAHAPSLVPWHPA*SRKEWNLDQTNGFL
Trigger: GAGGAAGCCATTGGTTTGGTCTAGGTTCCATTCTTTCCTGGAGCAGGCCGGGTGCCAGGGAACAAGGGATGGGGCATGGGCTCCACGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR GCA 90 bp GAGCAGCAGAGACAAGGCGCAGGGAAAGAGGGACAGGGAGTAGGGTaGCAACCAGTGAACCAGTTTCCGTGGCCAAGTCAGCAGGGAAGC +
Preference number: 1 (lower is better)
Translates to: EQQRQGAGKEGQGVG*QPVNQFPWPSQQGS
Trigger: GCTTCCCTGCTGACTTGGCCACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCGCCTTGTCTCTGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR GCA 90 bp CTGCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATaGCCTCTGATCAGGGATGTGACACGGGCTAATGACTGTTGTTGC +
Preference number: 1 (lower is better)
Translates to: LRLPAVLGGGDSPRR*PLIRDVTRANDCCC
Trigger: GCAACAACAGTCATTAGCCCGTGTCACATCCCTGATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CCA 90 bp AAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTaGCCAAGTCAGCAGGGAAGCCGTGGAGCCCATGCCCCATCCCTT +
Preference number: 1 (lower is better)
Translates to: KEGQGVGCQPVNQFP*PSQQGSRGAHAPSL
Trigger: AAGGGATGGGGCATGGGCTCCACGGCTTCCCTGCTGACTTGGCCACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR TCA 90 bp CACGCCCCCACGTGCTGCCCAACCCACCCTGCTATTTGTTATACCTaGCTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCT +
Preference number: 1 (lower is better)
Translates to: HAPTCCPTHPAICYT*LAGAQLSTSSSYFS
Trigger: AGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR GCA 90 bp CCCCACGTGCTGCCCAACCCACCCTGCTATTTGTTATACCTGACTTaGGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCC +
Preference number: 1 (lower is better)
Translates to: PHVLPNPPCYLLYLT*GCSAQHILKLLLSP
Trigger: GGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR GCA 90 bp GTGCTGCCCAACCCACCCTGCTATTTGTTATACCTGACTTGCGGGTaGTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATAGC +
Preference number: 1 (lower is better)
Translates to: VLPNPPCYLLYLTCG*SAQHILKLLLSPHS
Trigger: GCTATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CCA 90 bp CTCTCTCCAGTGAGAACGTGCCGTTCTAACCCACTCCAGCTGCCTTaGGTAGGGTGGAGCAACAGGCAGACCCATTTGATTCAGATTCTG +
Preference number: 1 (lower is better)
Translates to: LSPVRTCRSNPLQLP*VGWSNRQTHLIQIL
Trigger: CAGAATCTGAATCAAATGGGTCTGCCTGTTGCTCCACCCTACCCAAGGCAGCTGGAGTGGGTTAGAACGGCACGTTCTCACTGGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR CCA 90 bp GCCCCATCCCTTGTTCCCTGGCACCCGGCCTGCTCCAGGAAAGAATaGAACCTAGACCAAACCAATGGCTTCCTCTTTTTCTCTGGAAGT +
Preference number: 1 (lower is better)
Translates to: APSLVPWHPACSRKE*NLDQTNGFLFFSGS
Trigger: ACTTCCAGAGAAAAAGAGGAAGCCATTGGTTTGGTCTAGGTTCCATTCTTTCCTGGAGCAGGCCGGGTGCCAGGGAACAAGGGATGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR TCA 90 bp GGTTCTTTGTCATCGTGTGACTTGGAGCAGGCTGCTCAACCGCTTTaGGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCT +
Preference number: 1 (lower is better)
Translates to: GSLSSCDLEQAAQPL*ASVFSSVMAAKTDP
Trigger: AGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAAGCGGTTGAGCAGCCTGCTCCAAGTCACACGATGACAAAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR TCA 90 bp GTTGTTGCTGCAGCTGGGCCTGGACTTCAAGGAAACAATTATCTGTaGCTCAGTCCTCCAGTTAAAGGTGTGCAGAGGGTGGCAGGGTGC +
Preference number: 1 (lower is better)
Translates to: VVAAAGPGLQGNNYL*LSPPVKGVQRVAGC
Trigger: GCACCCTGCCACCCTCTGCACACCTTTAACTGGAGGACTGAGTCACAGATAATTGTTTCCTTGAAGTCCAGGCCCAGCTGCAGCAACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CCA 90 bp GTGAGAACGTGCCGTTCTAACCCACTCCAGCTGCCTTGGGTAGGGTaGAGCAACAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGT +
Preference number: 1 (lower is better)
Translates to: VRTCRSNPLQLPWVG*SNRQTHLIQILVLC
Trigger: ACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTGTTGCTCCACCCTACCCAAGGCAGCTGGAGTGGGTTAGAACGGCACGTTCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR TCA 90 bp ACCAATGGCTTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTaGCTCAGGAGGGTTTCCAGACACAGCAGCCAGGGGGTACCCAGT +
Preference number: 1 (lower is better)
Translates to: TNGFLFFSGSHYFTG*LRRVSRHSSQGVPS
Trigger: ACTGGGTACCCCCTGGCTGCTGTGTCTGGAAACCCTCCTGAGTCAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAAGCCATTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR GCA 90 bp TGCCCTCTGATCAGGGATGTGACACGGGCTAATGACTGTTGTTGCTaGAGCTGGGCCTGGACTTCAAGGAAACAATTATCTGTGACTCAG +
Preference number: 1 (lower is better)
Translates to: CPLIRDVTRANDCCC*SWAWTSRKQLSVTQ
Trigger: CTGAGTCACAGATAATTGTTTCCTTGAAGTCCAGGCCCAGCTGCAGCAACAACAGTCATTAGCCCGTGTCACATCCCTGATCAGAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CCA 90 bp CTGATCAGGGATGTGACACGGGCTAATGACTGTTGTTGCTGCAGCTaGGCCTGGACTTCAAGGAAACAATTATCTGTGACTCAGTCCTCC +
Preference number: 1 (lower is better)
Translates to: LIRDVTRANDCCCCS*AWTSRKQLSVTQSS
Trigger: GGAGGACTGAGTCACAGATAATTGTTTCCTTGAAGTCCAGGCCCAGCTGCAGCAACAACAGTCATTAGCCCGTGTCACATCCCTGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTaGAGCAGGCTGCTCAACCGCTTTGAGCCTCAGTATTCTCATCTG +
Preference number: 1 (lower is better)
Translates to: QTHLIQILVLCHRVT*SRLLNRFEPQYSHL
Trigger: CAGATGAGAATACTGAGGCTCAAAGCGGTTGAGCAGCCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR GCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGAGCCTGGGGCCACAGGTaGCCACTCCCCACCCTGCAG +
Preference number: 2 (lower is better)
Translates to: GHPPSVATRWNGSASTRGAWGHR*PLPTLQ
Trigger: CTGCAGGGTGGGGAGTGGGCACCTGTGGCCCCAGGC...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR GCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCGGCCCCGGGGCCTCCTaGCAAACCCTGCCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILGPGAS*QTLPLQ
Trigger: CTGGAGAGGCAGGGTTTGGCAGGAGGCCCCGGGGCC...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR-3UTR CCA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCAGGCCGCCCCACTCCCTaGCAGCTGCGGCTTCCAGCA +
Preference number: 2 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPGRPTP*QLRLPA
Trigger: TGCTGGAAGCCGCAGCTGCCAGGGAGTGGGGCGGCC...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR TCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTGTAGCAGCCTCGGCCTaGCCACGCCCCCACGTGCTG +
Preference number: 2 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLVAASA*PRPHVL
Trigger: CAGCACGTGGGGGCGTGGTCAGGCCGAGGCTGCTAC...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR GCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGACACGCCCCCACGTGCTaGCCAACCCACCCTGCTATT +
Preference number: 2 (lower is better)
Translates to: GHPPSVATRWNGSASTRGHAPTC*PTHPAI
Trigger: AATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGTG...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR GCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTGCCCACTCCCCACCCTaGAGGACAGGGGTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLAHSPP*RTGVSV
Trigger: CACAGACACCCCTGTCCTGCAGGGTGGGGAGTGGGC...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR GCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTCCCTGGCACCCGGCCTaGTCCAGGAAAGAATGGAAC +
Preference number: 2 (lower is better)
Translates to: RWNGSASTRGGGEASPGPPWHPA*SRKEWN
Trigger: GTTCCATTCTTTCCTGGAGCAGGCCGGGTGCCAGGG...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR GCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGTGCGGCTTCCAGCAGTaGTGGGTGGAGGCGATTCCC +
Preference number: 2 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRCGFQQ*WVEAIP
Trigger: GGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGCA...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CCA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCATCAGCAGGGAAGCCGTaGAGCCCATGCCCCATCCCT +
Preference number: 2 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPSAGKP*SPCPIP
Trigger: AGGGATGGGGCATGGGCTCCACGGCTTCCCTGCTGA...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGAAAGGTGTGCAGAGGGTaGCAGGGTGCGCAGGTAGAA +
Preference number: 2 (lower is better)
Translates to: GHPPSVATRWNGSASTRGKVCRG*QGAQVE
Trigger: TTCTACCTGCGCACCCTGCCACCCTCTGCACACCTT...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR GCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCCTCCTGCCAAACCCTaGCTCTCCAGGACCCTTCTC +
Preference number: 2 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRPPAKP*LSRTLL
Trigger: GAGAAGGGTCCTGGAGAGGCAGGGTTTGGCAGGAGG...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR-3UTR GCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATTACCTGACTTGCGGGTaGTCAGCTCAGCACATCCTC +
Preference number: 2 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDYLTCG*SAQHIL
Trigger: GAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTA...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGGAAGCCCAGCAGCTGTaGGAAGGAACCTGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: EEPEPEAEPGSCLANISMEAQQL*EGTCLG
Trigger: CCCCAGGCAGGTTCCTTCCCACAGCTGCTGGGCTTC...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCCATCCCTTGTTCCCTaGCACCCGGCCTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPPSLVP*HPACSR
Trigger: CCTGGAGCAGGCCGGGTGCCAGGGAACAAGGGATGG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR TCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGCAACCAACCAGCTGCTaGCAGGGGACCTGGCCATTC +
Preference number: 2 (lower is better)
Translates to: EEPEPEAEPGSCLANISMQPTSC*QGTWPF
Trigger: GAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTG...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR-3UTR GCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGCCACCGGTGGGGCTCTaGATCCGCCTCTCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGPPVGL*IRLSLV
Trigger: CACCAGGGAGAGGCGGATGCAGAGCCCCACCGGTGG...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR GCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGCCTGGGGCCACAGGTaGCCACTCCCCACCCTGCAG +
Preference number: 2 (lower is better)
Translates to: LSILICHGGQDRPCSFEEAWGHR*PLPTLQ
Trigger: CTGCAGGGTGGGGAGTGGGCACCTGTGGCCCCAGGC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR GCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCTCCCACACCCAACTCTaGTACCAAGCAGGCGTCTCA +
Preference number: 2 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILSHTQL*YQAGVS
Trigger: TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGA...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR GCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGCTGTGGGAAGGAACCTaGCTGGGGCCACAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGLWEGT*LGPQVP
Trigger: GGGCACCTGTGGCCCCAGGCAGGTTCCTTCCCACAG...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR TCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTAGATGGGAGCAACACTaGCAGGGAAGGACCAGAGGT +
Preference number: 2 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLRWEQH*QGRTRG
Trigger: ACCTCTGGTCCTTCCCTGTCAGTGTTGCTCCCATCT...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR GCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCCCACTCCCTGGCAGCTaGGGCTTCCAGCAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: LSLSILICHGGQDRPCSFPLPGS*GFQQCW
Trigger: CCAGCACTGCTGGAAGCCGCAGCTGCCAGGGAGTGG...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CCA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCAATGCAGGCAGGCAAATaGCATTACTGCCCCTGTCCT +
Preference number: 2 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPMQAGK*HYCPCP
Trigger: AGGACAGGGGCAGTAATGCCATTTGCCTGCCTGCAT...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CAA 90 bp CCCCCACGTGCTGCCCAACCCACCCTGCTATTTGTTATACCTGACTaGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACC +
Preference number: 2 (lower is better)
Translates to: PPRAAQPTLLFVIPD*RVLSSAHPQATSLT
Trigger: GGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGGGAGAGGAGAAGATATaGGGATGCCCGAACTACTCC +
Preference number: 2 (lower is better)
Translates to: EEPEPEAEPGSCLANISMGEEKI*GCPNYS
Trigger: GGAGTAGTTCGGGCATCCCCATATCTTCTCCTCTCC...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR-3UTR CCA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGAAGGAACCTGCCTaGGGCCACAGGTGCCCACTC +
Preference number: 2 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNGKEPA*GHRCPL
Trigger: GAGTGGGCACCTGTGGCCCCAGGCAGGTTCCTTCCC...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR CCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGATGCAGGCAGGCAAATaGCATTACTGCCCCTGTCCT +
Preference number: 2 (lower is better)
Translates to: EEPEPEAEPGSCLANISMMQAGK*HYCPCP
Trigger: AGGACAGGGGCAGTAATGCCATTTGCCTGCCTGCAT...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR-3UTR CCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCTATTCTCATCTGTCATaGCGGCCAAGACAGACCCTG +
Preference number: 2 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILYSHLS*RPRQTL
Trigger: CAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR CCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGGCTTCCAGCAGTGCTaGGTGGAGGCGATTCCCCAC +
Preference number: 2 (lower is better)
Translates to: LSILICHGGQDRPCSFEEGFQQC*VEAIPH
Trigger: GTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR GCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGGCCTCTCCCTGGTGTTaGAATCTGGCTGCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGASPWC*NLAAEG
Trigger: ACCCTCAGCAGCCAGATTGCAACACCAGGGAGAGGC...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR GCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCACCGGTGGGGCTCTaGATCCGCCTCTCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEPPVGL*IRLSLV
Trigger: CACCAGGGAGAGGCGGATGCAGAGCCCCACCGGTGG...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR TCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCCACCCTGTCATGTGTaGTTCCAGGCACCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLPPCHV*FQAPGQ
Trigger: CTGCCCTGGTGCCTGGAATCACACATGACAGGGTGG...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR TCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCCAGTGACCTTCCCCTaGACAGAAAGACCATTCCAT +
Preference number: 2 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPPVTFP*TERPFH
Trigger: ATGGAATGGTCTTTCTGTTCAGGGGAAGGTCACTGG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGGGGAAGGAACCTGCCTaGGGCCACAGGTGCCCACTC +
Preference number: 2 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRGKEPA*GHRCPL
Trigger: GAGTGGGCACCTGTGGCCCCAGGCAGGTTCCTTCCC...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR CCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGGTGAACCAGTTTCCGTaGCCAAGTCAGCAGGGAAGC +
Preference number: 2 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGVNQFP*PSQQGS
Trigger: GCTTCCCTGCTGACTTGGCCACGGAAACTGGTTCAC...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CAA 90 bp CCACTCCAGCTGCCTTGGGTAGGGTGGAGCAACAGGCAGACCCATTaGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: PLQLPWVGWSNRQTH*IQILVLCHRVTWSR
Trigger: CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTGTTGCTCCACCCTACCCAAGGCAGCTGGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR-3UTR TCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGACAGGCAGACCCATTTaGTTCAGATTCTGGTTCTTT +
Preference number: 2 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRTGRPI*FRFWFF
Trigger: AAAGAACCAGAATCTGAATCAAATGGGTCTGCCTGT...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR TCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCCATTACTTTACTGGCTaGCTCAGGAGGGTTTCCAGA +
Preference number: 2 (lower is better)
Translates to: SVDTPTPNSATKQASQLSHYFTG*LRRVSR
Trigger: TCTGGAAACCCTCCTGAGTCAGCCAGTAAAGTAATG...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGTCCAGCAGTGCTGGGTaGAGGCGATTCCCCACGGAG +
Preference number: 2 (lower is better)
Translates to: QADPFDSDSGSLSSCDLESSSAG*RRFPTE
Trigger: CTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGA...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR TCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCCACCCTGTCATGTGTaGTTCCAGGCACCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSPPCHV*FQAPGQ
Trigger: CTGCCCTGGTGCCTGGAATCACACATGACAGGGTGG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR TCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCAACCAACCAGCTGCTaGCAGGGGACCTGGCCATTC +
Preference number: 2 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSQPTSC*QGTWPF
Trigger: GAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR GCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGGACAGGGAGTAGGGTaGCAACCAGTGAACCAGTTT +
Preference number: 2 (lower is better)
Translates to: LSILICHGGQDRPCSFEEGQGVG*QPVNQF
Trigger: AAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR GCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGAGGGTGGCAGGGTaGGCAGGTAGAAAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEQRVAG*AGRKGG
Trigger: ACCACCCTTTCTACCTGCGCACCCTGCCACCCTCTG...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CCA 90 bp GCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGAAGTCATTACTTTACTaGCTGACTCAGGAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: AGKEGQGVGCQPVNQFPWKSLLY*LTQEGF
Trigger: GAAACCCTCCTGAGTCAGCCAGTAAAGTAATGACTT...CCACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR TCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGCTATTTGTTATACCTaGCTTGCGGGTGCTCAGCTC +
Preference number: 2 (lower is better)
Translates to: LSILICHGGQDRPCSFEEAICYT*LAGAQL
Trigger: GAGCTGAGCACCCGCAAGTCAGGTATAACAAATAGC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR GCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTGACCACGCCCCCACGTaGTGCCCAACCCACCCTGCT +
Preference number: 2 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFDHAPT*CPTHPA
Trigger: AGCAGGGTGGGTTGGGCAGCACGTGGGGGCGTGGTC...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CCA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATTATTCTCATCTGTCATaGCGGCCAAGACAGACCCTG +
Preference number: 2 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNYSHLS*RPRQTL
Trigger: CAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR CCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGAAAGGGTGGTTTGGTTaGATCCTAAAAAGGCCGTTG +
Preference number: 2 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGKGWFG*ILKRPL
Trigger: CAACGGCCTTTTTAGGATCCAACCAAACCACCCTTT...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCTGCTGCAGCTGGGCCTaGACTTCAAGGAAACAATTA +
Preference number: 2 (lower is better)
Translates to: LSLSILICHGGQDRPCSFCCSWA*TSRKQL
Trigger: TAATTGTTTCCTTGAAGTCCAGGCCCAGCTGCAGCA...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGGGAGAGGAGAAGATATaGGGATGCCCGAACTACTCC +
Preference number: 2 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEGEEKI*GCPNYS
Trigger: GGAGTAGTTCGGGCATCCCCATATCTTCTCCTCTCC...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR GCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTGCCTCTCCCTGGTGTTaGAATCTGGCTGCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFASPWC*NLAAEG
Trigger: ACCCTCAGCAGCCAGATTGCAACACCAGGGAGAGGC...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGGTAGAAAGGGTGGTTTaGTTGGATCCTAAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEVERVV*LDPKKA
Trigger: GGCCTTTTTAGGATCCAACCAAACCACCCTTTCTAC...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR GCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTCTGCCCAACCCACCCTaGTATTTGTTATACCTGACT +
Preference number: 2 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFLPNPP*YLLYLT
Trigger: AGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAG...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CCA 72 bp CCAGGTCCTGCTGAGGGAACCGGCCGCCCCACTCCCTaGCAGCTGCGGCTTCCAGCAGTGCTGGGTGGAGGC +
Preference number: 3 (lower is better)
Translates to: PGPAEGTGRPTP*QLRLPAVLGGG
Trigger: GCCTCCACCCAGCACTGCTGGAAGCCGCAGCTGCCAGGGAGTGGGGCGGCCGGTTCCCTCAGCAGGACCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR TCA 72 bp CAGTGTAATGGAGGAGCCCAGGTAGCAGCCTCGGCCTaGCCACGCCCCCACGTGCTGCCCAACCCACCCTGC +
Preference number: 3 (lower is better)
Translates to: QCNGGAQVAASA*PRPHVLPNPPC
Trigger: GCAGGGTGGGTTGGGCAGCACGTGGGGGCGTGGTCAGGCCGAGGCTGCTACCTGGGCTCCTCCATTACACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR GCA 72 bp GCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTaGCTGGCCAACATAAGTATGTGGCCCCGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: AEEPEPEAEPGS*LANISMWPRGL
Trigger: GAGGCCCCGGGGCCACATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR CCA 72 bp GCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGTaGCCCCGGGGCCTCCTGCCAAACCCTGCCTCTCCA +
Preference number: 3 (lower is better)
Translates to: AEPGSCLANISM*PRGLLPNPASP
Trigger: TGGAGAGGCAGGGTTTGGCAGGAGGCCCCGGGGCCACATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR-3UTR CAA 90 bp GCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGCCCATGCCCCATCCCTaGTTCCCTGGCACCCGGCCT +
Preference number: 3 (lower is better)
Translates to: AGKEGQGVGCQPVNQFPWPMPHP*FPGTRP
Trigger: AGGCCGGGTGCCAGGGAACAAGGGATGGGGCATGGG...CCACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR GCA 72 bp CCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATaGCCTCTGATCAGGGATGTGACACGGGCTAATGAC +
Preference number: 3 (lower is better)
Translates to: PAVLGGGDSPRR*PLIRDVTRAND
Trigger: GTCATTAGCCCGTGTCACATCCCTGATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR TCA 72 bp GCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTaGGCCTGGAAGCTGCCTGGCCAACATAAGTATGTG +
Preference number: 3 (lower is better)
Translates to: AGLLRRGTRARG*AWKLPGQHKYV
Trigger: CACATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR-3UTR CAA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATTTTGTTATACCTGACTaGCGGGTGCTCAGCTCAGCA +
Preference number: 3 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDFVIPD*RVLSSA
Trigger: TGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAA...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CAA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGAGAAAGGGTGGTTTGGTaGGATCCTAAAAAGGCCGTT +
Preference number: 3 (lower is better)
Translates to: GHPPSVATRWNGSASTRGERVVW*DPKKAV
Trigger: AACGGCCTTTTTAGGATCCAACCAAACCACCCTTTC...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR TCA 72 bp CCTCCTTCCTTCCCCACAGGCCAACCAACCAGCTGCTaGCAGGGGACCTGGCCATTCTCAGGACAAGAGAAT +
Preference number: 3 (lower is better)
Translates to: PPSFPTGQPTSC*QGTWPFSGQEN
Trigger: ATTCTCTTGTCCTGAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR GCA 72 bp GCCCATGCCCCATCCCTTGTTCCCTGGCACCCGGCCTaGTCCAGGAAAGAATGGAACCTAGACCAAACCAAT +
Preference number: 3 (lower is better)
Translates to: AHAPSLVPWHPA*SRKEWNLDQTN
Trigger: ATTGGTTTGGTCTAGGTTCCATTCTTTCCTGGAGCAGGCCGGGTGCCAGGGAACAAGGGATGGGGCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR GCA 72 bp AGACAAGGCGCAGGGAAAGAGGGACAGGGAGTAGGGTaGCAACCAGTGAACCAGTTTCCGTGGCCAAGTCAG +
Preference number: 3 (lower is better)
Translates to: RQGAGKEGQGVG*QPVNQFPWPSQ
Trigger: CTGACTTGGCCACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCGCCTTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CCA 72 bp AGAGGGTGGCAGGGTGCGCAGGTAGAAAGGGTGGTTTaGTTGGATCCTAAAAAGGCCGTTGGCAGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: RGWQGAQVERVV*LDPKKAVGSRG
Trigger: CCCTCTGCTGCCAACGGCCTTTTTAGGATCCAACCAAACCACCCTTTCTACCTGCGCACCCTGCCACCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR TCA 72 bp ACGTGCTGCCCAACCCACCCTGCTATTTGTTATACCTaGCTTGCGGGTGCTCAGCTCAGCACATCCTCAAGC +
Preference number: 3 (lower is better)
Translates to: TCCPTHPAICYT*LAGAQLSTSSS
Trigger: GCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CCA 72 bp GTGAGAACGTGCCGTTCTAACCCACTCCAGCTGCCTTaGGTAGGGTGGAGCAACAGGCAGACCCATTTGATT +
Preference number: 3 (lower is better)
Translates to: VRTCRSNPLQLP*VGWSNRQTHLI
Trigger: AATCAAATGGGTCTGCCTGTTGCTCCACCCTACCCAAGGCAGCTGGAGTGGGTTAGAACGGCACGTTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
3UTR TCA 72 bp TCATCGTGTGACTTGGAGCAGGCTGCTCAACCGCTTTaGGCCTCAGTATTCTCATCTGTCATGGCGGCCAAG +
Preference number: 3 (lower is better)
Translates to: SSCDLEQAAQPL*ASVFSSVMAAK
Trigger: CTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAAGCGGTTGAGCAGCCTGCTCCAAGTCACACGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR GCA 72 bp CTGCCCAACCCACCCTGCTATTTGTTATACCTGACTTaGGGGTGCTCAGCTCAGCACATCCTCAAGCTACTT +
Preference number: 3 (lower is better)
Translates to: LPNPPCYLLYLT*GCSAQHILKLL
Trigger: AAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CCA 72 bp AGTGACCTTCCCCTGAACAGAAAGACCATTCCATTCTaGCTACAGTGTAATGGAGGAGCCCAGGTAGCAGCC +
Preference number: 3 (lower is better)
Translates to: SDLPLNRKTIPF*LQCNGGAQVAA
Trigger: GGCTGCTACCTGGGCTCCTCCATTACACTGTAGCCAGAATGGAATGGTCTTTCTGTTCAGGGGAAGGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CCA 72 bp CTTGTTCCCTGGCACCCGGCCTGCTCCAGGAAAGAATaGAACCTAGACCAAACCAATGGCTTCCTCTTTTTC +
Preference number: 3 (lower is better)
Translates to: LVPWHPACSRKE*NLDQTNGFLFF
Trigger: GAAAAAGAGGAAGCCATTGGTTTGGTCTAGGTTCCATTCTTTCCTGGAGCAGGCCGGGTGCCAGGGAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CAA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGGCTGCTCAACCGCTTaGAGCCTCAGTATTCTCATC +
Preference number: 3 (lower is better)
Translates to: LSLSILICHGGQDRPCSFGCSTA*SLSILI
Trigger: GATGAGAATACTGAGGCTCAAAGCGGTTGAGCAGCC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR-3UTR CAA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTAACCCACCCTGCTATTaGTTATACCTGACTTGCGGG +
Preference number: 3 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLNPPCY*LYLTCG
Trigger: CCCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTT...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR TCA 72 bp TTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTaGCTCAGGAGGGTTTCCAGACACAGCAGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: FLFFSGSHYFTG*LRRVSRHSSQG
Trigger: CCCCTGGCTGCTGTGTCTGGAAACCCTCCTGAGTCAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR GCA 72 bp AACCCACCCTGCTATTTGTTATACCTGACTTGCGGGTaGTCAGCTCAGCACATCCTCAAGCTACTTCTCTCA +
Preference number: 3 (lower is better)
Translates to: NPPCYLLYLTCG*SAQHILKLLLS
Trigger: TGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR-3UTR CAA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGATCCTAAAAAGGCCGTaGGCAGCAGAGGGAAAAGGG +
Preference number: 3 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEILKRP*AAEGKG
Trigger: CCCTTTTCCCTCTGCTGCCAACGGCCTTTTTAGGAT...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACCATCTCAGGGCCACCCAGGCTTCCTTGGGGCGTaGGGGCCTGTGCCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: LPSALTRPVKGPPSQGHPGFLGA*GPVPAA
Trigger: CGCCGCAGGCACAGGCCCCCACGCCCCAAGGAAGCC...TGGGTGGCCCTGAGATGGTGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATGTAGCAGCCTCGGCCTaGCCACGCCCCCACGTGCTG +
Preference number: 4 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDVAASA*PRPHVL
Trigger: CAGCACGTGGGGGCGTGGTCAGGCCGAGGCTGCTAC...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCGTGGGGGCCTGTGCCTaGGGCGGCCCTCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPVGACA*GGPQEH
Trigger: ATGCTCCTGAGGGCCGCCGCAGGCACAGGCCCCCAC...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGGCTTCCTTGGGGCGTaGGGGCCTGTGCCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLEGFLGA*GPVPAA
Trigger: CGCCGCAGGCACAGGCCCCCACGCCCCAAGGAAGCC...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGGCCAAGGCCCTAACTaGAGCCGCGCGCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLGQGPN*SRAPQG
Trigger: CCCTTGGGGCGCGCGGCTGCAGTTAGGGCCTTGGCC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR GCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTGGCCCGTCTCGTGGCTaGGCCGGTGGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPGPSRG*AGGSGG
Trigger: GCCTCCTGAACCACCGGCGCAGCCACGAGACGGGCC...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCCCTCACTGGCCGCTGTaGCATCCAGGCCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPPHWPL*HPGLPG
Trigger: GCCAGGGAGGCCTGGATGGCACAGCGGCCAGTGAGG...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGCCTGGGGCCACAGGTaGCCACTCCCCACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLAWGHR*PLPTLQ
Trigger: CTGCAGGGTGGGGAGTGGGCACCTGTGGCCCCAGGC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGAGTGGGGCAGCTGTACTaGCCCGTCTCGTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGVGQLY*PVSWLR
Trigger: GCGCAGCCACGAGACGGGCCAGTACAGCTGCCCCAC...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGCACAGCTGTGCGCCTaGACCGTCCAGCCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLAQLCA*TVQPVA
Trigger: GGCGACGGGCTGGACGGTCCAGGCGCACAGCTGTGC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCCCTGATGGGGCTCTaGCTGCGCTCCCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLEALMGL*LRSPGL
Trigger: AAGGCCAGGGGAGCGCAGTCAGAGCCCCATCAGGGC...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR TCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGCCCTGATGGGGCTCTaGCTGCGCTCCCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLALMGL*LRSPGL
Trigger: AAGGCCAGGGGAGCGCAGTCAGAGCCCCATCAGGGC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCACCGGTGGGGCTCTaGATCCGCCTCTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLPPVGL*IRLSLV
Trigger: CACCAGGGAGAGGCGGATGCAGAGCCCCACCGGTGG...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGAGCCCACTCCCCACCCTaGAGGACAGGGGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGAHSPP*RTGVSV
Trigger: CACAGACACCCCTGTCCTGCAGGGTGGGGAGTGGGC...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACCATCTCAGGGCCACCCACCCAGCGTGTGGCTCTaGCGGTGGTTGGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LPSALTRPVKGPPSQGHPPSVWL*RWLVRL
Trigger: GAGCCTCACCAACCACCGCCAGAGCCACACGCTGGG...TGGGTGGCCCTGAGATGGTGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGACGATGGCTGTGGCGATaGTTCACCAGGCTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGRWLWR*FTRLPR
Trigger: CCGGGGGAGCCTGGTGAACCATCGCCACAGCCATCG...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGAGGGAAGGAACCTGCCTaGGGCCACAGGTGCCCACTC +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGGKEPA*GHRCPL
Trigger: GAGTGGGCACCTGTGGCCCCAGGCAGGTTCCTTCCC...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATCTCCCCCACCGACTTTaGGGCTGGACTTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDLPHRL*GWTSPS
Trigger: GGAGGGGGAAGTCCAGCCCCAAAGTCGGTGGGGGAG...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp CTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACCATCTCAGGGCCACCCAGGGAGCTGGTGGGACTaGTGGCTGCCCATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LPSALTRPVKGPPSQGHPGSWWD*WLPIFP
Trigger: GGGGAAAATGGGCAGCCATCAGTCCCACCAGCTCCC...TGGGTGGCCCTGAGATGGTGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATTCGCCGCCGATTCTCTaGGTGCAGCCTCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDSPPIL*VQPLVV
Trigger: GACCACCAGAGGCTGCACTCAGAGAATCGGCGGCGA...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGAGCCTCTGGGGGTTTCTaGTGGGGCCTCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGASGGF*WGLLGF
Trigger: AAAGCCCAGGAGGCCCCATCAGAAACCCCCAGAGGC...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCACCAGAGCCCGAGGCTaGGCCTGGAAGCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILTRARG*AWKLPG
Trigger: GCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGT...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR TCA 90 bp CTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACCATCTCAGGGCCACCCAACCTGCCCTCTGCTCTaGCAAGGCCTGTCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LPSALTRPVKGPPSQGHPTCPLL*QGLSRA
Trigger: GGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGT...TGGGTGGCCCTGAGATGGTGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGGGTCCCCAGCCGTCTaGACCATCCTCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLGSPAV*TILRTW
Trigger: CCAGGTCCTGAGGATGGTGCAGACGGCTGGGGACCC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGTGCGGGGCTGCCTCTaGCTCCACTGGGTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSVRGCL*LHWVRR
Trigger: CCGCCTGACCCAGTGGAGGCAGAGGCAGCCCCGCAC...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp ACGCCCCCACGTGCTGCCCAACCCACCCTGCTATTTGTTATACCTGACTTGCGGGTGCGGGGCTGCCTCTaGCTCCACTGGGTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: TPPRAAQPTLLFVIPDLRVRGCL*LHWVRR
Trigger: CCGCCTGACCCAGTGGAGGCAGAGGCAGCCCCGCAC...CCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTGCTTCCGATGCCGCCTaGTCCGCCGCCGACTGTGCC +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLASDAA*SAADCA
Trigger: GGCACAGTCGGCGGCGGAGCAGGCGGCATCGGAAGC...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCCAGCCCGCTTCCGATaGCGCCTGCTCCGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPPARFR*RLLRRR
Trigger: TCGGCGGCGGAGCAGGCGGCATCGGAAGCGGGCTGG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGACTCCATGGCATCACCTaGCACTCCCAAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGLHGIT*HSQGAG
Trigger: CCCAGCCCCTTGGGAGTGGCAGGTGATGCCATGGAG...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATGCTGGGGCTTGTTGCTaGCTCCTTCTGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDAGACC*LLLGWA
Trigger: GGCCCATCCCAGAAGGAGGCAGCAACAAGCCCCAGC...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCCTGGGGCCACAGGTaGCCACTCCCCACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSAWGHR*PLPTLQ
Trigger: CTGCAGGGTGGGGAGTGGGCACCTGTGGCCCCAGGC...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCTGCGGCTTCCAGCAGTaGTGGGTGGAGGCGATTCCC +
Preference number: 4 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPCGFQQ*WVEAIP
Trigger: GGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGCA...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCGTGGAGTGGCTTCCTTaGGGCGTGGGGGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILVEWLP*GVGACA
Trigger: GGCACAGGCCCCCACGCCCCAAGGAAGCCACTCCAC...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGAATGTGGACCCGCTGGTaGCTGGCCAGCTGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGMWTRW*LASCFR
Trigger: GCGGAAACAGCTGGCCAGCCACCAGCGGGTCCACAT...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAATACTGGCCCGTCTCGTaGCTGCGCCGGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLEYWPVS*LRRWFR
Trigger: CCTGAACCACCGGCGCAGCCACGAGACGGGCCAGTA...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATTCAGGTTCGCCTCACTaGCCGCTGTGCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDSGSPH*PLCHPG
Trigger: GCCTGGATGGCACAGCGGCCAGTGAGGCGAACCTGA...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTATTCGGCGGCGGAAGTaGCGGGGACAATGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLIRRRK*RGQWGQ
Trigger: CTGCCCCCATTGTCCCCGCCACTTCCGCCGCCGAAT...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATGTGCCCACCTCCTCCTaGGACCCTTCATGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDVPTSS*DPSCPL
Trigger: TAGGGGGCATGAAGGGTCCCAGGAGGAGGTGGGCAC...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATCTGGGAAAGTGGCGCTaGCAGTCGGAGCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDLGKWR*QSEQLS
Trigger: ACTCAGCTGCTCCGACTGTCAGCGCCACTTTCCCAG...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCGCGGGAGTTCTACCTTaGGGTGGCTGGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILAGVLP*GGWGHP
Trigger: AGGGTGCCCCCAGCCACCTCAAGGTAGAACTCCCGC...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGGAGGAAAGGCTGTGCTaGGGTCGCCTCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSREERLC*GRLPRP
Trigger: AGGCCTGGGGAGGCGACCTCAGCACAGCCTTTCCTC...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACACACACCTCGCAGCTaGAGGGCCGCTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPHTPRS*RAAQSW
Trigger: CCAGCTCTGAGCGGCCCTTCAGCTGCGAGGTGTGTG...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTGTGGGGGCCTGTGCCTaGGGCGGCCCTCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPVGACA*GGPQEH
Trigger: ATGCTCCTGAGGGCCGCCGCAGGCACAGGCCCCCAC...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTTGGCACAGGGGTAGATaGCCAGCGTGTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLWHRGR*PACGSG
Trigger: GCCAGAGCCACACGCTGGGCATCTACCCCTGTGCCA...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTACTGCGTGCAGGGGCTaGCTCTGCCACTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLTACRG*LCHSFL
Trigger: GAGGAAGGAGTGGCAGAGGCAGCCCCTGCACGCAGT...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCTCCATGGCATCACCTaGCACTCCCAAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLLHGIT*HSQGAG
Trigger: CCCAGCCCCTTGGGAGTGGCAGGTGATGCCATGGAG...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGACTCACTGCTACCTGCTaGCTCTGGGATGGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGLTATC*LWDGPN
Trigger: GTTGGGCCCATCCCAGAGGCAGCAGGTAGCAGTGAG...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGAGCTTCTCGACTTCTaGTTGCCCCGGCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLELLDF*LPRPLL
Trigger: GAGGAGGGGCCGGGGCAAGCAGAAGTCGAGAAGCTC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTTCATGCTCCCGCAGGTaGCGCTCCAAAGATCCCCGG +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLSCSRR*RSKDPR
Trigger: CCGGGGATCTTTGGAGCGGCACCTGCGGGAGCATGA...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCCTTTCTGTCTCCTCATaGTCCCGCAGGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPLSVSS*SRRCRS
Trigger: GGAGCGGCACCTGCGGGAGCATGAGGAGACAGAAAG...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGTACCGGCCACCCACCTaGCTTCCCTGCACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRYRPPT*LPCTPG
Trigger: TCCTGGGGTGCAGGGAAGGCAGGTGGGTGGCCGGTA...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCATACCGGCCACCCACCTaGCTTCCCTGCACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPYRPPT*LPCTPG
Trigger: TCCTGGGGTGCAGGGAAGGCAGGTGGGTGGCCGGTA...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATTCCTCCTGGTGCTGCTaGTGGTGCTGCACGAAGCTG +
Preference number: 4 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDSSWCC*WCCTKL
Trigger: CAGCTTCGTGCAGCACCAGCAGCAGCACCAGGAGGA...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCCACTCCTCCTGGTGCTaGTGCTGGTGCTGCACGAAG +
Preference number: 4 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPHSSWC*CWCCTK
Trigger: CTTCGTGCAGCACCAGCAGCAGCACCAGGAGGAGTG...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCGGCCCCGGGGCCTCCTaGCAAACCCTGCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSGPGAS*QTLPLQ
Trigger: CTGGAGAGGCAGGGTTTGGCAGGAGGCCCCGGGGCC...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR GCA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCCCCTGGCACCCGGCCTaGTCCAGGAAAGAATGGAAC +
Preference number: 4 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPPWHPA*SRKEWN
Trigger: GTTCCATTCTTTCCTGGAGCAGGCCGGGTGCCAGGG...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp ACGCCCCCACGTGCTGCCCAACCCACCCTGCTATTTGTTATACCTGACTTGCGGGTGGAGTGGCTTCCTTaGGGCGTGGGGGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: TPPRAAQPTLLFVIPDLRVEWLP*GVGACA
Trigger: GGCACAGGCCCCCACGCCCCAAGGAAGCCACTCCAC...CCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGCCGATGGTCCAGGGTaGTGGTGGGGTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLADGPG*WWGPLP
Trigger: AGGAAGAGGACCCCACCACCACCCTGGACCATCGGC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCAGTTCTACCTTGAGGTaGCTGGGGGCACCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPSSTLR*LGAPSA
Trigger: GGCTGAGGGTGCCCCCAGCCACCTCAAGGTAGAACT...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATGCACTGATAGATGCCTaGTGGGTGGCAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDALIDA*WVAGPV
Trigger: CACAGGCCCTGCCACCCACCAGGCATCTATCAGTGC...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTTTCCGAGAGCTGCAGTaGTGGACTGCGTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPFRELQ*WTACRG
Trigger: GCCCCTGCACGCAGTCCACCACTGCAGCTCTCGGAA...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGGGACCCGCTGGTGGCTaGCCAGCTGTTTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: EEPEPEAEPGSCLANISMGPAGG*PAVSAG
Trigger: GCCTGCGGAAACAGCTGGCCAGCCACCAGCGGGTCC...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp GCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGGGACCCGCTGGTGGCTaGCCAGCTGTTTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGKEGQGVGCQPVNQFPWGPAGG*PAVSAG
Trigger: GCCTGCGGAAACAGCTGGCCAGCCACCAGCGGGTCC...CCACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAATCAGGTTCGCCTCACTaGCCGCTGTGCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLESGSPH*PLCHPG
Trigger: GCCTGGATGGCACAGCGGCCAGTGAGGCGAACCTGA...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAACTGACTGCGCTCCCCTaGCCTTGGGACTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLELTALP*PWDSIL
Trigger: GAGGATGGAGTCCCAAGGCCAGGGGAGCGCAGTCAG...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTCTGACTGCGCTCCCCTaGCCTTGGGACTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPLTALP*PWDSIL
Trigger: GAGGATGGAGTCCCAAGGCCAGGGGAGCGCAGTCAG...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGAAGCCCAGCAGCTGTaGGAAGGAACCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLEAQQL*EGTCLG
Trigger: CCCCAGGCAGGTTCCTTCCCACAGCTGCTGGGCTTC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp ACGCCCCCACGTGCTGCCCAACCCACCCTGCTATTTGTTATACCTGACTTGCGGGCGGGAGTTCTACCTTaGGGTGGCTGGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: TPPRAAQPTLLFVIPDLRAGVLP*GGWGHP
Trigger: AGGGTGCCCCCAGCCACCTCAAGGTAGAACTCCCGC...CCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGCACACACCTCGCAGCTaGAGGGCCGCTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EEPEPEAEPGSCLANISMHTPRS*RAAQSW
Trigger: CCAGCTCTGAGCGGCCCTTCAGCTGCGAGGTGTGTG...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR TCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCACCCTGTCATGTGTaGTTCCAGGCACCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLPPCHV*FQAPGQ
Trigger: CTGCCCTGGTGCCTGGAATCACACATGACAGGGTGG...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTCAACCAACCAGCTGCTaGCAGGGGACCTGGCCATTC +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPQPTSC*QGTWPF
Trigger: GAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTG...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTCAGCTTTCAGGTaGCTCCCACCTGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLPSAFR*LPPALC
Trigger: GCAGAGGGCAGGTGGGAGTCACCTGAAAGCTGAAGG...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp CGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGAGGAGGTCACCAACTaGGGGGCAGACCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: RRERGTGSRVPTSEPVSVEEVTN*GADPAQ
Trigger: CTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTC...CACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGGTAGGGCCGAGGGATaGTGTCAGCCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLGRAEG*CQPPHC
Trigger: ACAGTGAGGAGGCTGACAGCATCCCTCGGCCCTACC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCTGGCACAGGGGTAGATaGCCAGCGTGTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILWHRGR*PACGSG
Trigger: GCCAGAGCCACACGCTGGGCATCTACCCCTGTGCCA...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGCAGTGGTGGACTGCGTaGAGGGGCTGCCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RRERGTGSRVPTSEPVSVQWWTA*RGCLCH
Trigger: GTGGCAGAGGCAGCCCCTGCACGCAGTCCACCACTG...CACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCTCTTGCCACACTGGTTaGAGCGGAAGGGGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILSCHTG*SGRGGA
Trigger: AGCCCCGCCCCTTCCGCTGCAACCAGTGTGGCAAGA...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAACCTTCCCACACTCGCTaGAGCGGAAACGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLEPSHTR*SGNVGD
Trigger: ATCCCCGACGTTTCCGCTGCAGCGAGTGTGGGAAGG...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTCCCACACTCGCTaGAGCGGAAACGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLPSHTR*SGNVGD
Trigger: ATCCCCGACGTTTCCGCTGCAGCGAGTGTGGGAAGG...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGAGGTCCTTCAGGGCCATaGGGTTGGAGTAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGGPSGP*GWSRSW
Trigger: CCAAGACCTACTCCAACCGCATGGCCCTGAAGGACC...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCTTTCTGTCTCCTCATaGTCCCGCAGGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLLSVSS*SRRCRS
Trigger: GGAGCGGCACCTGCGGGAGCATGAGGAGACAGAAAG...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATTCTCTAGTCCCTGGCTaGCAGTCAGGTTCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDSLVPG*QSGSPH
Trigger: GTGAGGCGAACCTGACTGGCAGCCAGGGACTAGAGA...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTCTGTGGGAAGGAACCTaGCTGGGGCCACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLLWEGT*LGPQVP
Trigger: GGGCACCTGTGGCCCCAGGCAGGTTCCTTCCCACAG...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAACCTCCTGCCAAACCCTaGCTCTCCAGGACCCTTCTC +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLEPPAKP*LSRTLL
Trigger: GAGAAGGGTCCTGGAGAGGCAGGGTTTGGCAGGAGG...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR GCA 90 bp CGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGTCCCCCTCCACTGTGTaGCCACCTCCTCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: RRERGTGSRVPTSEPVSVSPSTV*PPPPGT
Trigger: GGTCCCAGGAGGAGGTGGGCACACAGTGGAGGGGGA...CACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTGACCACGCCCCCACGTaGTGCCCAACCCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPDHAPT*CPTHPA
Trigger: AGCAGGGTGGGTTGGGCAGCACGTGGGGGCGTGGTC...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCCTCCCACCTGCCCTCTaGTCTGACAAGGCCTGTCAA +
Preference number: 4 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPLPPAL*SDKACQ
Trigger: TTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAG...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCGGCCCCAGGAGTCAGTaGACACCGTCTCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILGPRSQ*TPSHPG
Trigger: TCCAGGGTGAGACGGTGTCCACTGACTCCTGGGGCC...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCACCATCCTCAGGACCTaGGTGGCTTGCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPTILRT*VACQAF
Trigger: GAAGGCTTGGCAAGCCACCCAGGTCCTGAGGATGGT...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCGATGGTCCAGGGTGGTaGTGGGGTCCTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPDGPGW*WGPLPL
Trigger: AAGAGGAAGAGGACCCCACCACCACCCTGGACCATC...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGCGATGGCTGTGGCGATaGTTCACCAGGCTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQRWLWR*FTRLPR
Trigger: CCGGGGGAGCCTGGTGAACCATCGCCACAGCCATCG...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTAGTTCTACCTTGAGGTaGCTGGGGGCACCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLSSTLR*LGAPSA
Trigger: GGCTGAGGGTGCCCCCAGCCACCTCAAGGTAGAACT...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAATGCCTCTGCCTCCACTaGGTCAGGCGGGAGTTCTAC +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLECLCLH*VRREFY
Trigger: GTAGAACTCCCGCCTGACCCAGTGGAGGCAGAGGCA...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCAGCCTCCCCAGGCCTATaGTTCTGGAAGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPASPGL*FWKWLR
Trigger: CCGCAGCCACTTCCAGAACCATAGGCCTGGGGAGGC...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGCGAGAGCTGCAGTGGTaGACTGCGTGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: EEPEPEAEPGSCLANISMRELQW*TACRGC
Trigger: GCAGCCCCTGCACGCAGTCCACCACTGCAGCTCTCG...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCAGGGATGGGCCCAACCTaGGGCTCAGAGCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPGMGPT*GSEPLQ
Trigger: CTGCAAAGGCTCTGAGCCCCAGGTTGGGCCCATCCC...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGGCTACCTGCTGCCTCTaGGATGGGCCCAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: EEPEPEAEPGSCLANISMATCCL*DGPNLG
Trigger: CCCCAGGTTGGGCCCATCCCAGAGGCAGCAGGTAGC...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp GCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGGCTACCTGCTGCCTCTaGGATGGGCCCAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: AGKEGQGVGCQPVNQFPWATCCL*DGPNLG
Trigger: CCCCAGGTTGGGCCCATCCCAGAGGCAGCAGGTAGC...CCACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACCATCTCAGGGCCACCCATCCTCTGCCATGTGCTaGGGCTTGTTGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPSALTRPVKGPPSQGHPSSAMC*GLLLPP
Trigger: AGGAGGCAGCAACAAGCCCCAGCACATGGCAGAGGA...TGGGTGGCCCTGAGATGGTGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGTACTGGCCCGTCTCGTaGCTGCGCCGGTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQYWPVS*LRRWFR
Trigger: CCTGAACCACCGGCGCAGCCACGAGACGGGCCAGTA...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCGTGGGGCAGCTGTACTaGCCCGTCTCGTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSVGQLY*PVSWLR
Trigger: GCGCAGCCACGAGACGGGCCAGTACAGCTGCCCCAC...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTTCAGGGCCATGCGGTTaGAGTAGGTCTTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPSGPCG*SRSWGR
Trigger: CCTGCCCCAAGACCTACTCCAACCGCATGGCCCTGA...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGGAGTGCAGCCTCTGGTaGTCCTTCAGGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRECSLW*SFRAMR
Trigger: CCGCATGGCCCTGAAGGACCACCAGAGGCTGCACTC...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATTCTGAGTGCAGCCTCTaGTGGTCCTTCAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDSECSL*WSFRAM
Trigger: CATGGCCCTGAAGGACCACCAGAGGCTGCACTCAGA...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGATGGCAGTCACCAGCGTaGCAAGGACTCCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGWQSPA*QGLLWT
Trigger: TGTCCACAGGAGTCCTTGCCACGCTGGTGACTGCCA...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAATGTCCTCAGCCGCCATaGACGTCACCGCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLECPQPP*TSPLVL
Trigger: GAGGACAAGCGGTGACGTCCATGGCGGCTGAGGACA...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCACGGGTACAACCCTGTaGTGTGGGCCTTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPTGTTL*CGPSGG
Trigger: ACCACCAGAAGGCCCACACCACAGGGTTGTACCCGT...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCTGGGAAAGTGGCGCTaGCAGTCGGAGCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRLGKWR*QSEQLS
Trigger: ACTCAGCTGCTCCGACTGTCAGCGCCACTTTCCCAG...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGGTTGCGCAGGGCCATaGGATTGGGGTACTTGCGGG +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSGCAGP*DWGTCG
Trigger: CCCGCAAGTACCCCAATCTCATGGCCCTGCGCAACC...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTTTGCCTTCAGCCCCATaGGGACTTTCCCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLLPSAP*GLSPEG
Trigger: CCCTTCAGGGGAAAGTCCTCATGGGGCTGAAGGCAA...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCCAGTCAGAGCATGTGTaGGCGGCCCCAGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSQSEHV*AAPACQ
Trigger: CTGGCAGGCTGGGGCCGCTCACACATGCTCTGACTG...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCGTGCCTGCTCCCTCTTaGGACTTGGCATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILVPAPS*DLASPP
Trigger: GGGTGGAGATGCCAAGTCTCAAGAGGGAGCAGGCAC...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCACGGAAGGGGCGGGGCTaGGCCTCCAACAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSRKGRG*ASNKLS
Trigger: GGAAAGTTTGTTGGAGGCTCAGCCCCGCCCCTTCCG...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCACTGAGCTTGCTGCCCTaGTGGGGCTCTGACTGCGCT +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSLSLLP*WGSDCA
Trigger: AGCGCAGTCAGAGCCCCATCAGGGCAGCAAGCTCAG...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAATTCGGCGAGCAGCCTTaGAATGTACCCGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLEFGEQP*NVPARG
Trigger: ACCACGTGCGGGTACATTGCAAGGCTGCTCGCCGAA...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR GCA 90 bp CTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACCATCTCAGGGCCACCCATGCTGCTGTCTTGTCTaGTGCTGGGGTGATGTCCGT +
Preference number: 4 (lower is better)
Translates to: LPSALTRPVKGPPSQGHPCCCLV*CWGDVR
Trigger: ACGGACATCACCCCAGCAGCAGACAAGACAGCAGCA...TGGGTGGCCCTGAGATGGTGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGCCATGGTGTGGAAGTaGTTGGCACAGGCCCCACAA +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLAMVWK*LAQAPQ
Trigger: TTGTGGGGCCTGTGCCAAGCACTTCCACACCATGGC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp ACGCCCCCACGTGCTGCCCAACCCACCCTGCTATTTGTTATACCTGACTTGCGGGGGAGCACTGATAGATaGCTGGTGGGTGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TPPRAAQPTLLFVIPDLRGSTDR*LVGGRA
Trigger: GGCCCTGCCACCCACCAGGCATCTATCAGTGCTCCC...CCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCCTGAGCCCTCAGTCATaGCAGAGGAGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILLSPQS*QRSCGP
Trigger: AGGCCCACAGCTCCTCTGGCATGACTGAGGGCTCAG...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCAGCAGCCACAGATGTaGCCATACCCTGCACTGTCC +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLQQPQM*PYPALS
Trigger: GGACAGTGCAGGGTATGGGCACATCTGTGGCTGCTG...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAATTTCCCCACCCTGGATaGAGAGGCTGTCTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLEFPHPG*RGCLPR
Trigger: CCTTGGGAGACAGCCTCTGCATCCAGGGTGGGGAAA...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR GCA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGTCTTGCCACACTGGTTaGAGCGGAAGGGGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQSCHTG*SGRGGA
Trigger: AGCCCCGCCCCTTCCGCTGCAACCAGTGTGGCAAGA...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCATTCTCGACTTCTGCTTaGCCCGGCCCCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSFSTSA*PGPSSA
Trigger: GGCAGAGGAGGGGCCGGGGCAAGCAGAAGTCGAGAA...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTTCATGCTCCCGCAGGTaGCGCTCCAAAGATCCCCGG +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLSCSRR*RSKDPR
Trigger: CCGGGGATCTTTGGAGCGGCACCTGCGGGAGCATGA...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTGGTGGTTCAGCAGGCTaGCAGCATGGCGGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLGGSAG*QHGGRS
Trigger: GCTCCTACCGCCATGCTGGCAGCCTGCTGAACCACC...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGGTGGTTCAGCAGGCTaGCAGCATGGCGGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: RRERGTGSRVPTSEPVSVGGSAG*QHGGRS
Trigger: GCTCCTACCGCCATGCTGGCAGCCTGCTGAACCACC...CACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCGCCCACTCCCCACCCTaGAGGACAGGGGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSAHSPP*RTGVSV
Trigger: CACAGACACCCCTGTCCTGCAGGGTGGGGAGTGGGC...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCATCGTGGGTCCGACGATaGTTAACCAGGCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSSWVRR*LTRLPG
Trigger: CCCCGGGAGCCTGGTTAACCATCGTCGGACCCACGA...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCAGACACCGTCTCACCCTaGAGGTGTGGAGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPDTVSP*RCGVAS
Trigger: GGAAGCCACTCCACACCTCCAGGGTGAGACGGTGTC...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTCCCTCATGGGACTGCTaGTGTTCCAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLPSWDC*CSSSSR
Trigger: CCGGGAGCTGCTGGAACACCAGCAGTCCCATGAGGG...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTTTTCTCCTCCCAGCGTaGCTCCTGCCTTTCACCCTC +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPFLLPA*LLPFTL
Trigger: GAGGGTGAAAGGCAGGAGCCACGCTGGGAGGAGAAA...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCCGATGGTCCAGGGTaGTGGTGGGGTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQADGPG*WWGPLP
Trigger: AGGAAGAGGACCCCACCACCACCCTGGACCATCGGC...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCCGAGAGCTGCAGTGGTaGACTGCGTGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSRELQW*TACRGC
Trigger: GCAGCCCCTGCACGCAGTCCACCACTGCAGCTCTCG...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGAAAACTTTCCCCACCCTaGATGCAGAGGCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGKLSPP*MQRLSP
Trigger: GGGAGACAGCCTCTGCATCCAGGGTGGGGAAAGTTT...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGGTTGCTGCCTCCTTCTaGGATGGGCCCAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRVAASF*DGPNLQ
Trigger: CTGCAGGTTGGGCCCATCCCAGAAGGAGGCAGCAAC...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTTCCTCTGCCATGTGCTaGGGCTTGTTGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLSSAMC*GLLLPP
Trigger: AGGAGGCAGCAACAAGCCCCAGCACATGGCAGAGGA...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCACGGCAGTCTCCAGCCTaGGCTCTATCTCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSRQSPA*ALSPPP
Trigger: AGGGGGAGGAGATAGAGCCCAGGCTGGAGACTGCCG...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGCCAAAGTGGCCGGTCTaGTGGCTCTGCCGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQPKWPV*WLCRWL
Trigger: CAACCACCGGCAGAGCCACCAGACCGGCCACTTTGG...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGAGTGCAGCCTCTGGTaGTCCTTCAGGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: RRERGTGSRVPTSEPVSVECSLW*SFRAMR
Trigger: CCGCATGGCCCTGAAGGACCACCAGAGGCTGCACTC...CACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTGAGCCTGCAGGTGGCTaGCCAGTTCCTGGTGGGACT +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLEPAGG*PVPGGT
Trigger: AGTCCCACCAGGAACTGGCCAGCCACCTGCAGGCTC...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp ACGCCCCCACGTGCTGCCCAACCCACCCTGCTATTTGTTATACCTGACTTGCGGGAAGCCCAGCAGCTGTaGGAAGGAACCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TPPRAAQPTLLFVIPDLREAQQL*EGTCLG
Trigger: CCCCAGGCAGGTTCCTTCCCACAGCTGCTGGGCTTC...CCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGAGCACCTTCCTCTGGTaGAGGGGCCAAGGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRSTFLW*RGQGLG
Trigger: TCCTAGGCCTTGGCCCCTCCACCAGAGGAAGGTGCT...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CAA 72 bp CCACGCCCCCACGTGCTGCCCAACCCACCCTGCTATTaGTTATACCTGACTTGCGGGTGCTCAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PRPHVLPNPPCY*LYLTCGCSAQH
Trigger: GTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCGGGAGCTGGTGGGACTaGTGGCTGCCCATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSGSWWD*WLPIFP
Trigger: GGGGAAAATGGGCAGCCATCAGTCCCACCAGCTCCC...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACTTGCGGGGACAGAGTaGGCACTGGTACTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPLAGTE*ALVLSS
Trigger: ACTGGAGAGTACCAGTGCTCACTCTGTCCCCGCAAG...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCTTCATCCACCCCAGTaGGGCTATCGCAGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLLHPPQ*GYRRSE
Trigger: CTCACTTCTGCGATAGCCTCACTGGGGTGGATGAAG...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAACCTCCCGCTGCAGCTaGTTCAGCAGCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSTSRCS*FSSSAS
Trigger: GGAAGCAGAGCTGCTGAATCAGCTGCAGCGGGAGGT...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCGCCGCCGATTCTCTaGGTGCAGCCTCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSSPPIL*VQPLVV
Trigger: GACCACCAGAGGCTGCACTCAGAGAATCGGCGGCGA...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCCTGAGCTTGCTGCCCTaGTGGGGCTCTGACTGCGCT +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSLSLLP*WGSDCA
Trigger: AGCGCAGTCAGAGCCCCATCAGGGCAGCAAGCTCAG...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCAGCCCAGGTCCTGCTaGGGGAACCGGCCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLQPRSC*GNRPPH
Trigger: GTGGGGCGGCCGGTTCCCTCAGCAGGACCTGGGCTG...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGGTAGGGCCGAGGGATaGTGTCAGCCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSGRAEG*CQPPHC
Trigger: ACAGTGAGGAGGCTGACAGCATCCCTCGGCCCTACC...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGCCACGTACCCGAAGCTaGCCTGGGGTCAGGTACAGA +
Preference number: 4 (lower is better)
Translates to: AGKEGQGVGCQPVNQFPWPRTRS*PGVRYR
Trigger: TCTGTACCTGACCCCAGGGCAGCTTCGGGTACGTGG...CCACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGGGAGCTGGTCCTGGCTaGTCTCATCTGTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRGAGPG*SHLCAH
Trigger: ATGGGCACACAGATGAGAGCAGCCAGGACCAGCTCC...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCTTCGGCGAGCAGCCTTaGAATGTACCCGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILFGEQP*NVPARG
Trigger: ACCACGTGCGGGTACATTGCAAGGCTGCTCGCCGAA...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCTGCTGTCTTGTCTGCTaGTGGGGTGATGTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILCCLVC*WGDVRG
Trigger: GCCACGGACATCACCCCAGCAGCAGACAAGACAGCA...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCGCCCAGGGAAGATCATaGCACAGAGGCAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILAQGRS*HRGSRG
Trigger: TCCTCTGCTGCCTCTGTGGCATGATCTTCCCTGGGC...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCACTGAGCCCTCAGTCATaGCAGAGGAGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSLSPQS*QRSCGP
Trigger: AGGCCCACAGCTCCTCTGGCATGACTGAGGGCTCAG...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGTGTCTCCCAAGGGGGTaGCTGCTCCCTCTTGAGACT +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRCLPRG*LLPLET
Trigger: AGTCTCAAGAGGGAGCAGGCACCCCCTTGGGAGACA...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTCCCTCCTCTGCCATGTaGTGGGGCTTGTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLPSSAM*WGLLLP
Trigger: AGGCAGCAACAAGCCCCAGCACATGGCAGAGGAGGG...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTTCTCGACTTCTGCTTaGCCCGGCCCCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSFSTSA*PGPSSA
Trigger: GGCAGAGGAGGGGCCGGGGCAAGCAGAAGTCGAGAA...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCGAAACGTCGGGGATCTaGATGGATGCGCCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILETSGI*MDAPVV
Trigger: AACCACCGGCGCATCCATGCAGATCCCCGACGTTTC...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTCACTCCTCCTGGTGCTaGTGCTGGTGCTGCACGAAG +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLHSSWC*CWCCTK
Trigger: CTTCGTGCAGCACCAGCAGCAGCACCAGGAGGAGTG...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCACGCCCCCACGTGCTaGCCAACCCACCCTGCTATT +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPHAPTC*PTHPAI
Trigger: AATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGTG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GCAGAGACAAGGCGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACAGAGGGTGGCAGGGTaGGCAGGTAGAAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: AETRRRERGTGSRVPTSEQRVAG*AGRKGG
Trigger: ACCACCCTTTCTACCTGCGCACCCTGCCACCCTCTG...TTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCGCCTTGTCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCGCCTCCTCACTGTCCTaGTTGGGAGATGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILASSLS*LGDGWS
Trigger: GCTCCATCCATCTCCCAACCAGGACAGTGAGGAGGC...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAAAGTCCTTGCCACAGGTaGTACAGGGGAAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLESPCHR*YRGKGQ
Trigger: CTGGCCTTTTCCCCTGTACCACCTGTGGCAAGGACT...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCACCATCCTCAGGACCTaGGTGGCTTGCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILTILRT*VACQAF
Trigger: GAAGGCTTGGCAAGCCACCCAGGTCCTGAGGATGGT...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GCAGAGACAAGGCGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAAGACTGGGTGGGCTCCTaGCCCCCTGTGAAGTTCACT +
Preference number: 4 (lower is better)
Translates to: AETRRRERGTGSRVPTSEDWVGS*PPVKFT
Trigger: AGTGAACTTCACAGGGGGCCAGGAGCCCACCCAGTC...TTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCGCCTTGTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTTGCCTTTCACCCTCATaGGACTGCTGGTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPCLSPS*DCWCSS
Trigger: GCTGGAACACCAGCAGTCCCATGAGGGTGAAAGGCA...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGTTTCTCCTCCCAGCGTaGCTCCTGCCTTTCACCCTC +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRFLLPA*LLPFTL
Trigger: GAGGGTGAAAGGCAGGAGCCACGCTGGGAGGAGAAA...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTGGACAGAGTGAGCACTaGTACTCTCCAGTCCGATGG +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPGQSEH*YSPVRW
Trigger: CCATCGGACTGGAGAGTACCAGTGCTCACTCTGTCC...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCCAATGTACCCGCACGTaGTTGCGCAGGGCCATGAGA +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILQCTRT*LRRAMR
Trigger: TCTCATGGCCCTGCGCAACCACGTGCGGGTACATTG...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCATGCCTCTGCCTCCACTaGGTCAGGCGGGAGTTCTAC +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSCLCLH*VRREFY
Trigger: GTAGAACTCCCGCCTGACCCAGTGGAGGCAGAGGCA...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTCTGAAGTCTCCTGTCTaGTGGGTCTGCCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPLKSPV*WVCLWL
Trigger: CAACCACAGGCAGACCCACCAGACAGGAGACTTCAG...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCATGGCAGCCATGGTGTaGAAGTGCTTGGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILMAAMV*KCLAQA
Trigger: GGCCTGTGCCAAGCACTTCCACACCATGGCTGCCAT...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGGGGTTGGCCAGTGGCTaGCTTCTGGTCTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRGLASG*LLVFIH
Trigger: GTGGATGAAGACCAGAAGCCAGCCACTGGCCAACCC...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCACCAGGCCTATGGTTCTaGAAGTGGCTGCGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSPGLWF*KWLRRA
Trigger: TGCCCTCCGCAGCCACTTCCAGAACCATAGGCCTGG...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTTGGTGGATCTTGCGGTaGTTCACCAGGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLWWILR*FTRLPP
Trigger: TGGGGGCAGCCTGGTGAACCACCGCAAGATCCACCA...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACCATCTCAGGGCCACCCAAAGTCTCCAGTCTGGTaGATCTTGCGGTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: LPSALTRPVKGPPSQGHPKSPVW*ILRWFT
Trigger: GGTGAACCACCGCAAGATCCACCAGACTGGAGACTT...TGGGTGGCCCTGAGATGGTGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTGGGATGGGCCCAACCTaGGGCTCAGAGCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPGMGPT*GSEPLQ
Trigger: CTGCAAAGGCTCTGAGCCCCAGGTTGGGCCCATCCC...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTGAGCTGGCTTCAGTCTaGCAGCCCTTCTCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLELASV*QPFSAV
Trigger: GACTGCCGAGAAGGGCTGCCAGACTGAAGCCAGCTC...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAAAGTGGCCGGTCTGGTaGCTCTGCCGGTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSKWPVW*LCRWLM
Trigger: CATCAACCACCGGCAGAGCCACCAGACCGGCCACTT...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGAAGTGGCCGGTCTGGTaGCTCTGCCGGTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQKWPVW*LCRWLM
Trigger: CATCAACCACCGGCAGAGCCACCAGACCGGCCACTT...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCCAAAGTGGCCGGTCTaGTGGCTCTGCCGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPPKWPV*WLCRWL
Trigger: CAACCACCGGCAGAGCCACCAGACCGGCCACTTTGG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCACGTCGGGGATCTGCATaGATGCGCCGGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSRRGSA*MRRWFL
Trigger: CAAGAACCACCGGCGCATCCATGCAGATCCCCGACG...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCCATCCAGGCCTCCCTaGCCATTGGCTGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPPSRPP*PLAGSL
Trigger: AAGGGAGCCAGCCAATGGCCAGGGAGGCCTGGATGG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGCGTCTATGTGGTTGTaGCTGTGGCTCTTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLASMWL*LWLFVA
Trigger: GGCCACAAAGAGCCACAGCCACAACCACATAGACGC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGTGTCCTCAGCCGCCATaGACGTCACCGCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: AGKEGQGVGCQPVNQFPWCPQPP*TSPLVL
Trigger: GAGGACAAGCGGTGACGTCCATGGCGGCTGAGGACA...CCACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTGCCAACATAAGTATGTaGCCCCGGGGCCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLANISM*PRGLLP
Trigger: TGGCAGGAGGCCCCGGGGCCACATACTTATGTTGGC...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCGGCAGCACCTTCCTCTaGTGGAGGGGCCAAGGCCTA +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSGSTFL*WRGQGL
Trigger: TAGGCCTTGGCCCCTCCACCAGAGGAAGGTGCTGCC...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp ACGCCCCCACGTGCTGCCCAACCCACCCTGCTATTTGTTATACCTGACTTGCGGGCCACCCACCCTCGGTaGCCACTAGATGGAATGGGT +
Preference number: 4 (lower is better)
Translates to: TPPRAAQPTLLFVIPDLRATHPR*PLDGMG
Trigger: ACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGC...CCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCAGCTCCTGGCCCCCTGTaGAGTTCACTACTGATTCAG +
Preference number: 4 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPAPGPL*SSLLIQ
Trigger: CTGAATCAGTAGTGAACTTCACAGGGGGCCAGGAGC...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTCTGCTTAGAACAGAGTaGGCAGGGGTAGACACCTGT +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPLLRTE*AGVDTC
Trigger: ACAGGTGTCTACCCCTGCTCACTCTGTTCTAAGCAG...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCATGTCTGCTGCTGGGGTaGTGTCCGTGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSCLLLG*CPWPLL
Trigger: AAGAAGAGGCCACGGACATCACCCCAGCAGCAGACA...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGCAGTCAGAGCATGTGTaGGCGGCCCCAGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGQSEHV*AAPACQ
Trigger: CTGGCAGGCTGGGGCCGCTCACACATGCTCTGACTG...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGACCTAGTTAGGAACTaGGGAACCCAGCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLEDLVRN*GTQPPL
Trigger: TAGTGGAGGCTGGGTTCCTCAGTTCCTAACTAGGTC...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR TCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGACCTAGTTAGGAACTaGGGAACCCAGCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLDLVRN*GTQPPL
Trigger: TAGTGGAGGCTGGGTTCCTCAGTTCCTAACTAGGTC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp CTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACCATCTCAGGGCCACCCATTCTTTGTCATCGTGTaGCTTGGAGCAGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LPSALTRPVKGPPSQGHPFFVIV*LGAGCS
Trigger: TGAGCAGCCTGCTCCAAGTCACACGATGACAAAGAA...TGGGTGGCCCTGAGATGGTGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGAGATGGGAGCAACACTaGCAGGGAAGGACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRRWEQH*QGRTRG
Trigger: ACCTCTGGTCCTTCCCTGTCAGTGTTGCTCCCATCT...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTTGGAGCAGTTCTCGGTaGCGAGAGAGCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPWSSSR*RESSGR
Trigger: CCTCCCAGAGCTCTCTCGGCACCGAGAACTGCTCCA...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTAGGACCTGGGTGGCTTaGCAAGCCTTCTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPRTWVA*QAFSLS
Trigger: AGACAAAGAGAAGGCTTGGCAAGCCACCCAGGTCCT...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp ACGCCCCCACGTGCTGCCCAACCCACCCTGCTATTTGTTATACCTGACTTGCGGTCACCCTCATGGGACTaGTGGTGTTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TPPRAAQPTLLFVIPDLRSPSWD*WCSSSS
Trigger: GGAGCTGCTGGAACACCAGCAGTCCCATGAGGGTGA...CCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGGAGCTGGTCCTGGCTaGTCTCATCTGTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQGAGPG*SHLCAH
Trigger: ATGGGCACACAGATGAGAGCAGCCAGGACCAGCTCC...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGAGCTACAGATATGTGCTaGTGTCTTGTCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGATDMC*CLVCCW
Trigger: CCAGCAGCAGACAAGACAGCAGCACATATCTGTAGC...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCCCAGGGAAGATCATaGCACAGAGGCAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQAQGRS*HRGSRG
Trigger: TCCTCTGCTGCCTCTGTGGCATGATCTTCCCTGGGC...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCATCTGCTTCCGAGAGCTaGAGTGGTGGACTGCGTGCA +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSSASES*SGGLRA
Trigger: TGCACGCAGTCCACCACTGCAGCTCTCGGAAGCAGA...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTGATGTGCCCATACCCTaGACTGTCCAGCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLDVPIP*TVQRFH
Trigger: GTGGAAGCGCTGGACAGTGCAGGGTATGGGCACATC...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTTCCCAAGGGGGTGCCTaGTCCCTCTTGAGACTTGGC +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPSQGGA*SLLRLG
Trigger: GCCAAGTCTCAAGAGGGAGCAGGCACCCCCTTGGGA...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGGTCCTTCAGGGCCATaGGGTTGGAGTAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSGPSGP*GWSRSW
Trigger: CCAAGACCTACTCCAACCGCATGGCCCTGAAGGACC...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGCGCCGATTCTCTGAGTaGAGCCTCTGGTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: EEPEPEAEPGSCLANISMRRFSE*SLWWSF
Trigger: GAAGGACCACCAGAGGCTGCACTCAGAGAATCGGCG...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR GCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTTCTCCTCTCACTCCTTaGTCCCCCACCGACTTTGGG +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLSPLTP*SPTDFG
Trigger: CCCAAAGTCGGTGGGGGAGCAAGGAGTGAGAGGAGA...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGATTGTTATACCTGACTTaGGGGTGCTCAGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGLLYLT*GCSAQH
Trigger: GTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAA...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCGATTCCCCACGGAGATaGCCTCTGATCAGGGATGTG +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILDSPRR*PLIRDV
Trigger: CACATCCCTGATCAGAGGGCATCTCCGTGGGGAATC...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGGAAGGAGCAGACACGTaGCAGCACCTTCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: EEPEPEAEPGSCLANISMEGADT*QHLPLV
Trigger: CACCAGAGGAAGGTGCTGCCACGTGTCTGCTCCTTC...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCTACCCGAAGCTGCCCTaGGGTCAGGTACAGATTCAC +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILYPKLP*GQVQIH
Trigger: GTGAATCTGTACCTGACCCCAGGGCAGCTTCGGGTA...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATCCCTCATGGGACTGCTaGTGTTCCAGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LTCGCSAQHILKLLLSPHPSWDC*CSSSSR
Trigger: CCGGGAGCTGCTGGAACACCAGCAGTCCCATGAGGG...ATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGTGCCTTTCACCCTCATaGGACTGCTGGTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRCLSPS*DCWCSS
Trigger: GCTGGAACACCAGCAGTCCCATGAGGGTGAAAGGCA...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCTGGGGAGCTGGTCCTaGCTGCTCTCATCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPLGSWS*LLSSVC
Trigger: GCACACAGATGAGAGCAGCCAGGACCAGCTCCCCAG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGCTTCCTCTTTGTGGGTaGTCTCAGCCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RRERGTGSRVPTSEPVSVLPLCG*SQPAAG
Trigger: CCCTGCTGCTGGCTGAGACCACCCACAAAGAGGAAG...CACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCCAGGCCTATGGTTCTaGAAGTGGCTGCGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPPGLWF*KWLRRA
Trigger: TGCCCTCCGCAGCCACTTCCAGAACCATAGGCCTGG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTGGTGGATCTTGCGGTaGTTCACCAGGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSWWILR*FTRLPP
Trigger: TGGGGGCAGCCTGGTGAACCACCGCAAGATCCACCA...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTGTTGCTGCCTCCTTCTaGGATGGGCCCAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPVAASF*DGPNLQ
Trigger: CTGCAGGTTGGGCCCATCCCAGAAGGAGGCAGCAAC...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGCCTCTTCTTTCACCCTaGCCACTTCCTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: AGKEGQGVGCQPVNQFPWPLLSP*PLPPGA
Trigger: AGCCCCTGGAGGAAGTGGCCAGGGTGAAAGAAGAGG...CCACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTCCTCCCCCTTCACAGTaGTCTCCTCCCACACCTCTT +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLPPPSQ*SPPTPL
Trigger: AAGAGGTGTGGGAGGAGACCACTGTGAAGGGGGAGG...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCAGGTTTGAGAAGCCCTTaGAGCAGGCCTGACAGCCAA +
Preference number: 4 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPGLRSP*SRPDSQ
Trigger: TTGGCTGTCAGGCCTGCTCCAAGGGCTTCTCAAACC...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCATGGATGCGCCGGTaGTTCTTGAGGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSAWMRR*FLRDMR
Trigger: CCTCATGTCCCTCAAGAACCACCGGCGCATCCATGC...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGTCTGAGTGCAGCCTCTaGTGGTCCTTCAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQSECSL*WSFRAM
Trigger: CATGGCCCTGAAGGACCACCAGAGGCTGCACTCAGA...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGGAGAGGAGAAGATATaGGGATGCCCGAACTACTCC +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLGEEKI*GCPNYS
Trigger: GGAGTAGTTCGGGCATCCCCATATCTTCTCCTCTCC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGCTGCCTTGGGTAGGGTaGAGCAACAGGCAGACCCAT +
Preference number: 4 (lower is better)
Translates to: EEPEPEAEPGSCLANISMLPWVG*SNRQTH
Trigger: ATGGGTCTGCCTGTTGCTCCACCCTACCCAAGGCAG...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp CTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATTCCAGCAGTGCTGGGTaGAGGCGATTCCCCACGGAG +
Preference number: 4 (lower is better)
Translates to: LTCGCSAQHILKLLLSPHSSSAG*RRFPTE
Trigger: CTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGA...ATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GCAGAGACAAGGCGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGCCCTGGCAAACTaGCTCCTCCCTCATATCCCT +
Preference number: 4 (lower is better)
Translates to: AETRRRERGTGSRVPTSEPALAN*LLPHIP
Trigger: AGGGATATGAGGGAGGAGCCAGTTTGCCAGGGCTGG...TTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCGCCTTGTCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp CTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATCACAGGCCCCACAACTaGAGTCTCCTGTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LTCGCSAQHILKLLLSPHHRPHN*SLLSGG
Trigger: CCCACCAGACAGGAGACTTCAGTTGTGGGGCCTGTG...ATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTAGGCTATCGCAGAAGTaGGTGCCACCACCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLRLSQK*VPPPSS
Trigger: TGAGGAAGGTGGTGGCACTCACTTCTGCGATAGCCT...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCACTTCATCCACCCCAGTaGGGCTATCGCAGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSLHPPQ*GYRRSE
Trigger: CTCACTTCTGCGATAGCCTCACTGGGGTGGATGAAG...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTGCTATTTGTTATACCTaGCTTGCGGGTGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPAICYT*LAGAQL
Trigger: GAGCTGAGCACCCGCAAGTCAGGTATAACAAATAGC...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCGATTGGAGAAGTCCTTaGCACAGGTGGTACAGGGGA +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILDWRSP*HRWYRG
Trigger: TCCCCTGTACCACCTGTGGCAAGGACTTCTCCAATC...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTGGCCGATACTGGGCATaGAGTCGAGAGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLGRYWA*SREWFF
Trigger: GAAGAACCACTCTCGACTGCATGCCCAGTATCGGCC...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGCTGCTCTCATCTGTGTaGCCATTGGTGGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQLLSSV*PLVVGI
Trigger: GATGCCCACCACCAATGGGCACACAGATGAGAGCAG...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCATGCTGCTGTCTTGTCTaGTGCTGGGGTGATGTCCGT +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSCCCLV*CWGDVR
Trigger: ACGGACATCACCCCAGCAGCAGACAAGACAGCAGCA...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATCCTTCAGATTCAGCCTaGAAACAGTCCCCATCACTT +
Preference number: 4 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDPSDSA*KQSPSL
Trigger: AAGTGATGGGGACTGTTTGCAGGCTGAATCTGAAGG...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGTATCGCAGAAGTGAGTaGCACCACCTTCCTCACCTG +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRYRRSE*HHLPHL
Trigger: CAGGTGAGGAAGGTGGTGGCACTCACTTCTGCGATA...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCGATGTGCCCATACCCTaGACTGTCCAGCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSDVPIP*TVQRFH
Trigger: GTGGAAGCGCTGGACAGTGCAGGGTATGGGCACATC...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTGCTGGGAGCCTTGTCTaGAGTAGTCCCAGAACTCTG +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLAGSLV*SSPRTL
Trigger: CAGAGTTCTGGGACTACTGCAGACAAGGCTCCCAGC...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTTGTCTCCCAAGGGGGTaGCTGCTCCCTCTTGAGACT +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPCLPRG*LLPLET
Trigger: AGTCTCAAGAGGGAGCAGGCACCCCCTTGGGAGACA...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGCATGGCGATAGGTCTTaGCACACTGGTTGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQHGDRS*HTGCSG
Trigger: TCCGCTGCAACCAGTGTGGCAAGACCTATCGCCATG...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGGTGGTTCAGGAGGCTaGCGGCGTGGCGATAGGTCC +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEEGGSGG*RRGDRS
Trigger: GGACCTATCGCCACGCCGGCAGCCTCCTGAACCACC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTGCCTCTCCCTGGTGTTaGAATCTGGCTGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPASPWC*NLAAEG
Trigger: ACCCTCAGCAGCCAGATTGCAACACCAGGGAGAGGC...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCATCCCACACCCAACTCTaGTACCAAGCAGGCGTCTCA +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSSHTQL*YQAGVS
Trigger: TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGA...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GGCCACCCACCCTCGGTGGCCACTAGATGGAATGGGTCCGCCTCTACTAGGGGACTGCCCAACCCACCCTaGTATTTGTTATACCTGACT +
Preference number: 4 (lower is better)
Translates to: GHPPSVATRWNGSASTRGLPNPP*YLLYLT
Trigger: AGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAG...TCCCCTAGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGAGGGTGGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTAATGACTGTTGTTGCTaGAGCTGGGCCTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPNDCCC*SWAWTS
Trigger: TGAAGTCCAGGCCCAGCTGCAGCAACAACAGTCATT...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGAAAAGAGGGCGCAGCTaGCATGAGCCAGGAGTCTAC +
Preference number: 4 (lower is better)
Translates to: EEPEPEAEPGSCLANISMKRGRS*HEPGVY
Trigger: GTAGACTCCTGGCTCATGCCAGCTGCGCCCTCTTTT...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTGAAGGAGCAGACACGTaGCAGCACCTTCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPEGADT*QHLPLV
Trigger: CACCAGAGGAAGGTGCTGCCACGTGTCTGCTCCTTC...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACCATCTCAGGGCCACCCAAACGTAGCAGAAACCTaGAGGTTCAGAAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LPSALTRPVKGPPSQGHPNVAET*RFRRSR
Trigger: TCTGCTCCTTCTGAACCTCCAGGTTTCTGCTACGTT...TGGGTGGCCCTGAGATGGTGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCAAAAAGGCCAGTCTCGTaGGTCCGACGATGGTTAACC +
Preference number: 4 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPKRPVS*VRRWLT
Trigger: GGTTAACCATCGTCGGACCCACGAGACTGGCCTTTT...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GCAGAGACAAGGCGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAAAGTCCTTGCCACAGGTaGTACAGGGGAAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AETRRRERGTGSRVPTSESPCHR*YRGKGQ
Trigger: CTGGCCTTTTCCCCTGTACCACCTGTGGCAAGGACT...TTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCGCCTTGTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTGCATGTGTCCTCATATaGCTCTTGAGAGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLACVLI*LLRAMG
Trigger: TCCCATGGCTCTCAAGAGCCATATGAGGACACATGC...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGTACCCGAAGCTGCCCTaGGGTCAGGTACAGATTCAC +
Preference number: 4 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQYPKLP*GQVQIH
Trigger: GTGAATCTGTACCTGACCCCAGGGCAGCTTCGGGTA...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCTTCCTCTTTGTGGGTaGTCTCAGCCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPLPLCG*SQPAAG
Trigger: CCCTGCTGCTGGCTGAGACCACCCACAAAGAGGAAG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTGGTCCAGGGTGGTGGTaGGGTCCTCTTCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPGPGWW*GPLPLC
Trigger: ACAAAGAGGAAGAGGACCCCACCACCACCCTGGACC...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTGGACAGAGTGAGCACTaGTACTCTCCAGTCCGATGG +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLGQSEH*YSPVRW
Trigger: CCATCGGACTGGAGAGTACCAGTGCTCACTCTGTCC...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAAACCACCTTCCTCACCTaGGATGTCCAAGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLETTFLT*DVQVVK
Trigger: CTTGACAACTTGGACATCCCAGGTGAGGAAGGTGGT...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTACCACCTTCCTCACCTaGGATGTCCAAGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: RWNGSASTRGGGEASPGPTTFLT*DVQVVK
Trigger: CTTGACAACTTGGACATCCCAGGTGAGGAAGGTGGT...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCCCAGTGGCTGGCTTCTaGTCTTCATCCACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSPVAGF*SSSTPV
Trigger: CACTGGGGTGGATGAAGACCAGAAGCCAGCCACTGG...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCAGTGGGAAGAGGAGTTaGGTTGGCCAGTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSSGKRS*VGQWLA
Trigger: AGCCAGCCACTGGCCAACCCAACTCCTCTTCCCACT...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCACAGCATTGGCAGAGTaGGAAGAGGAGTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILTALAE*EEELGW
Trigger: CCAACCCAACTCCTCTTCCCACTCTGCCAATGCTGT...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCCTCTTCTTTCACCCTaGCCACTTCCTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPPLLSP*PLPPGA
Trigger: AGCCCCTGGAGGAAGTGGCCAGGGTGAAAGAAGAGG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATCGTCGGGGATCTGCATaGATGCGCCGGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LTCGCSAQHILKLLLSPHRRGSA*MRRWFL
Trigger: CAAGAACCACCGGCGCATCCATGCAGATCCCCGACG...ATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCATGCAGGCAGGCAAATaGCATTACTGCCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILMQAGK*HYCPCP
Trigger: AGGACAGGGGCAGTAATGCCATTTGCCTGCCTGCAT...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTTATTCTCATCTGTCATaGCGGCCAAGACAGACCCTG +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLYSHLS*RPRQTL
Trigger: CAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGTCAGCAGGGAAGCCGTaGAGCCCATGCCCCATCCCT +
Preference number: 4 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGSAGKP*SPCPIP
Trigger: AGGGATGGGGCATGGGCTCCACGGCTTCCCTGCTGA...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGTCCTCATATGGCTCTTaGGAGCCATGGGATTGGAGA +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRSSYGS*EPWDWR
Trigger: TCTCCAATCCCATGGCTCTCAAGAGCCATATGAGGA...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTGCTCCTGGCCCCCTGTaGAGTTCACTACTGATTCAG +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPAPGPL*SSLLIQ
Trigger: CTGAATCAGTAGTGAACTTCACAGGGGGCCAGGAGC...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGTTGATAAGGCTGCCTaGGTGGCGATAGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSVDKAA*VAIALS
Trigger: GGAAAGAGCTATCGCCACTCAGGCAGCCTTATCAAC...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGAGGAAAGGCTGTGCTaGGGTCGCCTCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNEERLC*GRLPRP
Trigger: AGGCCTGGGGAGGCGACCTCAGCACAGCCTTTCCTC...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCCGGAAGGGGCGGGGCTaGGCCTCCAACAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFRKGRG*ASNKLS
Trigger: GGAAAGTTTGTTGGAGGCTCAGCCCCGCCCCTTCCG...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCAGCTGCTCAACCGCTTTaGGCCTCAGTATTCTCATCT +
Preference number: 4 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPAAQPL*ASVFSS
Trigger: AGATGAGAATACTGAGGCTCAAAGCGGTTGAGCAGC...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCCCTTCTCTCTCCAGTaGGAACGTGCCGTTCTAACC +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPPFSLQ*ERAVLT
Trigger: GGTTAGAACGGCACGTTCTCACTGGAGAGAGAAGGG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR GCA 90 bp GCAGAGACAAGGCGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAAGATTGGAGAAGTCCTTaGCACAGGTGGTACAGGGGA +
Preference number: 4 (lower is better)
Translates to: AETRRRERGTGSRVPTSEDWRSP*HRWYRG
Trigger: TCCCCTGTACCACCTGTGGCAAGGACTTCTCCAATC...TTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCGCCTTGTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCTGCTCTCATCTGTGTaGCCATTGGTGGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPLLSSV*PLVVGI
Trigger: GATGCCCACCACCAATGGGCACACAGATGAGAGCAG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCGGTGGGACTGATGGCTaGCCATTTTCCCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSGGTDG*PFSPTP
Trigger: AGGAGTTGGGGAAAATGGGCAGCCATCAGTCCCACC...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCTCCGCCGCCGACTGTaGCGGCGCAAGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLLRRRL*RRKWFF
Trigger: GAAGAACCACTTGCGCCGGCACAGTCGGCGGCGGAG...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGGCTTCCGATGCCGCCTaGTCCGCCGCCGACTGTGCC +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRASDAA*SAADCA
Trigger: GGCACAGTCGGCGGCGGAGCAGGCGGCATCGGAAGC...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATTCTGCTTCCGAGAGCTaGAGTGGTGGACTGCGTGCA +
Preference number: 4 (lower is better)
Translates to: LTCGCSAQHILKLLLSPHSASES*SGGLRA
Trigger: TGCACGCAGTCCACCACTGCAGCTCTCGGAAGCAGA...ATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTGCTGGGAGCCTTGTCTaGAGTAGTCCCAGAACTCTG +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPAGSLV*SSPRTL
Trigger: CAGAGTTCTGGGACTACTGCAGACAAGGCTCCCAGC...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATCAGTCTGGTGGATCTTaGGGTGGTTCACCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LTCGCSAQHILKLLLSPHQSGGS*GGSPGC
Trigger: GCAGCCTGGTGAACCACCGCAAGATCCACCAGACTG...ATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGGGGCTCAGAGCCTTTaGAGCGAGGGTGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFGAQSL*SEGGSA
Trigger: TGCGGAACCACCCTCGCTGCAAAGGCTCTGAGCCCC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGCTGGGGCTTGTTGCTaGCTCCTTCTGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEEAGACC*LLLGWA
Trigger: GGCCCATCCCAGAAGGAGGCAGCAACAAGCCCCAGC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGCCCTCCTCTGCCATGTaGTGGGGCTTGTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGPSSAM*WGLLLP
Trigger: AGGCAGCAACAAGCCCCAGCACATGGCAGAGGAGGG...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTTCTCCAGTGAGAACGTaGCGTTCTAACCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLSPVRT*RSNPLQ
Trigger: CTGGAGTGGGTTAGAACGGCACGTTCTCACTGGAGA...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTGGCAGCACCTTCCTCTaGTGGAGGGGCCAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLGSTFL*WRGQGP
Trigger: AGGGCCTTGGCCCCTCCACCAGAGGAAGGTGCTGCC...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp CTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATGGGGTGTGTCCTCCATaGGGCAACGTAGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: LTCGCSAQHILKLLLSPHGVCPP*GNVAET
Trigger: GGTTTCTGCTACGTTGCCCCATGGAGGACACACCCC...ATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGGCATGTGTCCTCATATaGCTCTTGAGAGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRACVLI*LLRAMG
Trigger: TCCCATGGCTCTCAAGAGCCATATGAGGACACATGC...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCATGCAGTCGAGAGTaGTTCTTCAGAGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSACSRE*FFRAMR
Trigger: CCTCATGGCTCTGAAGAACCACTCTCGACTGCATGC...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAACCCCAACTCCTTGCCTaGGCCTGTGATGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEEPQLLA*ACDEPA
Trigger: TGCGGGCTCATCACAGGCCCAGGCAAGGAGTTGGGG...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGTCTTCATGGCAGCCATaGTGTGGAAGTGCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQSSWQP*CGSAWH
Trigger: GTGCCAAGCACTTCCACACCATGGCTGCCATGAAGA...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCCCGCTGCCAGGAGTTTaGCTTCTCTCCCACCGCTGG +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFPLPGV*LLSHRW
Trigger: CCAGCGGTGGGAGAGAAGCCAAACTCCTGGCAGCGG...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGCCTCCCCAGGCCTATaGTTCTGGAAGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFASPGL*FWKWLR
Trigger: CCGCAGCCACTTCCAGAACCATAGGCCTGGGGAGGC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATTCCGAGAGCTGCAGTaGTGGACTGCGTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEEFRELQ*WTACRG
Trigger: GCCCCTGCACGCAGTCCACCACTGCAGCTCTCGGAA...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGAGAAAGTCTCCAGTCTaGTGGATCTTGCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRRKSPV*WILRWF
Trigger: GAACCACCGCAAGATCCACCAGACTGGAGACTTTCT...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGGTAGGCAGCCAGGTTaGGGTAGCAGCGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFGRQPG*GSSGSR
Trigger: TCTGCTCCCGCTGCTACCCCAACCTGGCTGCCTACC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCGCACAGCTGTGCGCCTaGACCGTCCAGCCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSAQLCA*TVQPVA
Trigger: GGCGACGGGCTGGACGGTCCAGGCGCACAGCTGTGC...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGCGCTCCCCTGGCCTTaGGACTCCATCCTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFALPWP*DSILQV
Trigger: CACTTGGAGGATGGAGTCCCAAGGCCAGGGGAGCGC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGAGCCTGCAGGTGGCTaGCCAGTTCCTGGTGGGACT +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEEEPAGG*PVPGGT
Trigger: AGTCCCACCAGGAACTGGCCAGCCACCTGCAGGCTC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAACAGATGCTGCAGCAGTaGCGCTTGGGGTCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEEQMLQQ*RLGSVW
Trigger: CCACACGGACCCCAAGCGCCACTGCTGCAGCATCTG...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTGGTGCTGCTGCTaGTGCTGCACGAAGCTGATT +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSSWCCC*CCTKLI
Trigger: AATCAGCTTCGTGCAGCACCAGCAGCAGCACCAGGA...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTGGGAAGGAACCTGCCTaGGGCCACAGGTGCCCACTC +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLGKEPA*GHRCPL
Trigger: GAGTGGGCACCTGTGGCCCCAGGCAGGTTCCTTCCC...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTGTGAACCAGTTTCCGTaGCCAAGTCAGCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPVNQFP*PSQQGS
Trigger: GCTTCCCTGCTGACTTGGCCACGGAAACTGGTTCAC...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACCATCTCAGGGCCACCCAGTAGAAAGGGTGGTTTaGTTGGATCCTAAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LPSALTRPVKGPPSQGHPVERVV*LDPKKA
Trigger: GGCCTTTTTAGGATCCAACCAAACCACCCTTTCTAC...TGGGTGGCCCTGAGATGGTGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGTGCCTGCTCCCTCTTaGGACTTGGCATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEEVPAPS*DLASPP
Trigger: GGGTGGAGATGCCAAGTCTCAAGAGGGAGCAGGCAC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGGCTGCTCAACCGCTTTaGGCCTCAGTATTCTCATCT +
Preference number: 4 (lower is better)
Translates to: EEPEPEAEPGSCLANISMAAQPL*ASVFSS
Trigger: AGATGAGAATACTGAGGCTCAAAGCGGTTGAGCAGC...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR TCA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCACAGGCAGACCCATTTaGTTCAGATTCTGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPTGRPI*FRFWFF
Trigger: AAAGAACCAGAATCTGAATCAAATGGGTCTGCCTGT...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCATTACTTTACTGGCTaGCTCAGGAGGGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRHYFTG*LRRVSR
Trigger: TCTGGAAACCCTCCTGAGTCAGCCAGTAAAGTAATG...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCCCACGTACCCGAAGCTaGCCTGGGGTCAGGTACAGA +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFPRTRS*PGVRYR
Trigger: TCTGTACCTGACCCCAGGGCAGCTTCGGGTACGTGG...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATGGTGGGACTGATGGCTaGCCATTTTCCCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: LTCGCSAQHILKLLLSPHGGTDG*PFSPTP
Trigger: AGGAGTTGGGGAAAATGGGCAGCCATCAGTCCCACC...ATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCCACGACCACACTCACTaGACTTATAGGGCCGATGGT +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSHDHTH*TYRADG
Trigger: ACCATCGGCCCTATAAGTGCAGTGAGTGTGGTCGTG...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGAGAGCAGCCCACAGATaGTACAGATATGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RRERGTGSRVPTSEPVSVRAAHR*YRYVLL
Trigger: CAGCAGCACATATCTGTAGCATCTGTGGGCTGCTCT...CACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGGTGGTTCACCAGGCTaGCCCCATGGCGATAGGTCT +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFGGSPG*PHGDRS
Trigger: AGACCTATCGCCATGGGGGCAGCCTGGTGAACCACC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGGTGGTTCACCAGGCTaGCCCCATGGCGATAGGTCT +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEEGGSPG*PHGDRS
Trigger: AGACCTATCGCCATGGGGGCAGCCTGGTGAACCACC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTGGGGCTCAGAGCCTTTaGAGCGAGGGTGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLGAQSL*SEGGSA
Trigger: TGCGGAACCACCCTCGCTGCAAAGGCTCTGAGCCCC...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCGCAACGCACAGCTGTaGGCCTGGACCGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSRNAQL*AWTVQP
Trigger: GGGCTGGACGGTCCAGGCGCACAGCTGTGCGTTGCG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGCCTCACTGGCCGCTGTaGCATCCAGGCCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRPHWPL*HPGLPG
Trigger: GCCAGGGAGGCCTGGATGGCACAGCGGCCAGTGAGG...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCTCCTCCTGGTGCTGCTaGTGGTGCTGCACGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFSSWCC*WCCTKL
Trigger: CAGCTTCGTGCAGCACCAGCAGCAGCACCAGGAGGA...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CTATTTGTTATACCTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTCTGTGGGAAGGAACCTaGCTGGGGCCACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LFVIPDLRVLSSAHPQATLWEGT*LGPQVP
Trigger: GGGCACCTGTGGCCCCAGGCAGGTTCCTTCCCACAG...AGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATTACTCTCCAGTCCGATaGCTGTGGCGATGGTTCACC +
Preference number: 4 (lower is better)
Translates to: LTCGCSAQHILKLLLSPHYSPVR*LWRWFT
Trigger: GGTGAACCATCGCCACAGCCATCGGACTGGAGAGTA...ATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCCGCTGCCAGGAGTTTaGCTTCTCTCCCACCGCTGG +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLPLPGV*LLSHRW
Trigger: CCAGCGGTGGGAGAGAAGCCAAACTCCTGGCAGCGG...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTAGTTGGGTTGGCCAGTaGCTGGCTTCTGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPSWVGQ*LASGLH
Trigger: ATGAAGACCAGAAGCCAGCCACTGGCCAACCCAACT...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGAGTGGGAAGAGGAGTTaGGTTGGCCAGTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGSGKRS*VGQWLA
Trigger: AGCCAGCCACTGGCCAACCCAACTCCTCTTCCCACT...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTACAGCATTGGCAGAGTaGGAAGAGGAGTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPTALAE*EEELGW
Trigger: CCAACCCAACTCCTCTTCCCACTCTGCCAATGCTGT...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTATGTGGACCCGCTGGTaGCTGGCCAGCTGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLMWTRW*LASCFR
Trigger: GCGGAAACAGCTGGCCAGCCACCAGCGGGTCCACAT...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCACGCCGTTCCATGTaGACCCGCTGGTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEPRRSM*TRWWLA
Trigger: GGCCAGCCACCAGCGGGTCCACATGGAACGGCGTGG...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGTGGCAGTCACCAGCGTaGCAAGGACTCCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGWQSPA*QGLLWT
Trigger: TGTCCACAGGAGTCCTTGCCACGCTGGTGACTGCCA...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCGTGTGGGTCCTGCTGTaGTTCTTAAGAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSVWVLL*FLRDSR
Trigger: CCTGCTGTCTCTTAAGAACCACAGCAGGACCCACAC...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTATTTGTTATACCTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTGCAGCAGTGGCGCTTaGGGTCCGTGTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LFVIPDLRVLSSAHPQATCSSGA*GPCGSC
Trigger: GCAGGACCCACACGGACCCCAAGCGCCACTGCTGCA...AGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTGGAGAGGAGAAGATATaGGGATGCCCGAACTACTCC +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPGEEKI*GCPNYS
Trigger: GGAGTAGTTCGGGCATCCCCATATCTTCTCCTCTCC...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTATGCAGGCAGGCAAATaGCATTACTGCCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPMQAGK*HYCPCP
Trigger: AGGACAGGGGCAGTAATGCCATTTGCCTGCCTGCAT...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCAAGACCATTCCATTCTaGCTACAGTGTAATGGAGGA +
Preference number: 4 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPKTIPF*LQCNGG
Trigger: TCCTCCATTACACTGTAGCCAGAATGGAATGGTCTT...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCCTTGCGGGGACAGAGTaGGCACTGGTACTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFLAGTE*ALVLSS
Trigger: ACTGGAGAGTACCAGTGCTCACTCTGTCCCCGCAAG...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGTCTGCTGCTGGGGTaGTGTCCGTGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEECLLLG*CPWPLL
Trigger: AAGAAGAGGCCACGGACATCACCCCAGCAGCAGACA...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCAAAGGCCCTAGGAGGTaGCATTGTGGTCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SVDTPTPNSATKQASQLSKGPRR*HCGLCS
Trigger: AGAACAGAGACCACAATGTCACCTCCTAGGGCCTTT...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGAGGGACATGAGGTTTaGGAAGCCCTTGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEEEGHEV*EALGAG
Trigger: GCCTGCTCCAAGGGCTTCTCAAACCTCATGTCCCTC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTTTCTTTGTCATCGTGTaGCTTGGAGCAGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPFFVIV*LGAGCS
Trigger: TGAGCAGCCTGCTCCAAGTCACACGATGACAAAGAA...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAAACAGGCAGACCCATTTaGTTCAGATTCTGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLETGRPI*FRFWFF
Trigger: AAAGAACCAGAATCTGAATCAAATGGGTCTGCCTGT...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR TCA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCCTCCCTCATATCCCTTaGGGTCATGAGAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILLPHIP*GHEKSS
Trigger: AGAAGATTTCTCATGACCTCAAGGGATATGAGGGAG...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGGGGTCCCCAGCCGTCTaGACCATCCTCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRGSPAV*TILRTW
Trigger: CCAGGTCCTGAGGATGGTGCAGACGGCTGGGGACCC...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGCCATTCAGCATCTGTaGACTGGGGAGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFAIQHL*TGELVL
Trigger: CAGGACCAGCTCCCCAGTGCACAGATGCTGAATGGC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGGATGCTACAGATATGTaGTGCTGTCTTGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EEPEPEAEPGSCLANISMDATDM*CCLVCC
Trigger: GCAGCAGACAAGACAGCAGCACATATCTGTAGCATC...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR GCA 90 bp CGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGATGCTACAGATATGTaGTGCTGTCTTGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRERGTGSRVPTSEPVSVDATDM*CCLVCC
Trigger: GCAGCAGACAAGACAGCAGCACATATCTGTAGCATC...CACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGCTCCGCCGCCGACTGTaGCGGCGCAAGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRLRRRL*RRKWFF
Trigger: GAAGAACCACTTGCGCCGGCACAGTCGGCGGCGGAG...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGGTCCAGCTCTCCGCTaGCAGGAGTTTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEEGPALR*QEFGFS
Trigger: AGAGAAGCCAAACTCCTGGCAGCGGAGAGCTGGACC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTCCTTCAGATTCAGCCTaGAAACAGTCCCCATCACTT +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLPSDSA*KQSPSL
Trigger: AAGTGATGGGGACTGTTTGCAGGCTGAATCTGAAGG...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCCAGCAGCCACAGATGTaGCCATACCCTGCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFQQPQM*PYPALS
Trigger: GGACAGTGCAGGGTATGGGCACATCTGTGGCTGCTG...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAAACGTCGGGGATCTaGATGGATGCGCCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFETSGI*MDAPVV
Trigger: AACCACCGGCGCATCCATGCAGATCCCCGACGTTTC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGGGTGGTTCAGGAGGCTaGCGGCGTGGCGATAGGTCC +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRGGSGG*RRGDRS
Trigger: GGACCTATCGCCACGCCGGCAGCCTCCTGAACCACC...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCTCTCTAGTCCCTGGCTaGCAGTCAGGTTCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFSLVPG*QSGSPH
Trigger: GTGAGGCGAACCTGACTGGCAGCCAGGGACTAGAGA...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATTTTAAGGCTTCCCTGTaGACAAGCTTCCCAAATATA +
Preference number: 4 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDFKASL*TSFPNI
Trigger: TATATTTGGGAAGCTTGTGCACAGGGAAGCCTTAAA...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTAACGTAGCAGAAACCTaGAGGTTCAGAAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLNVAET*RFRRSR
Trigger: TCTGCTCCTTCTGAACCTCCAGGTTTCTGCTACGTT...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGGGGTGTGTCCTCCATaGGGCAACGTAGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFGVCPP*GNVAET
Trigger: GGTTTCTGCTACGTTGCCCCATGGAGGACACACCCC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCAGAGCTCTGGGAGGCTaGGAAAGTGGCGCTGACAGT +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFRALGG*ESGADS
Trigger: ACTGTCAGCGCCACTTTCCCAGCCTCCCAGAGCTCT...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCCCAGCGTGTGGCTCTaGCGGTGGTTGGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSPSVWL*RWLVRL
Trigger: GAGCCTCACCAACCACCGCCAGAGCCACACGCTGGG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGCTGTGTGCCCATTGGTaGTGGGCATCCCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGLCAHW*WASLSP
Trigger: AGGAGAAAGGGATGCCCACCACCAATGGGCACACAG...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGGTCCAGGGTGGTGGTaGGGTCCTCTTCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEEGPGWW*GPLPLC
Trigger: ACAAAGAGGAAGAGGACCCCACCACCACCCTGGACC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATCCCCTGAAGGGTCTTaGGGAGACTCCAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEESPEGS*GDSRPS
Trigger: TGAAGGCCTGGAGTCTCCCCAAGACCCTTCAGGGGA...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGACTCCATCCTCCAAGTaGGGTACTGGCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGTPSSK*GTGSAP
Trigger: TGGTGCTGAGCCAGTACCCCACTTGGAGGATGGAGT...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTATTTGTTATACCTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTGCGCTCCCCTGGCCTTaGGACTCCATCCTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LFVIPDLRVLSSAHPQATALPWP*DSILQV
Trigger: CACTTGGAGGATGGAGTCCCAAGGCCAGGGGAGCGC...AGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATCCACTCCAGCTGCCTTaGGTAGGGTGGAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNPLQLP*VGWSNR
Trigger: CCTGTTGCTCCACCCTACCCAAGGCAGCTGGAGTGG...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTATTAACTTCGCCTCTTaGCTCTACGAGCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLINFAS*LYEQQV
Trigger: AACTTGTTGCTCGTAGAGCCAAGAGGCGAAGTTAAT...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCCATCCCTTGTTCCCTaGCACCCGGCCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSPSLVP*HPACSR
Trigger: CCTGGAGCAGGCCGGGTGCCAGGGAACAAGGGATGG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
3UTR CAA 72 bp GCTGCCCAACCCACCCTGCTATTTGTTATACCTGACTaGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACT +
Preference number: 4 (lower is better)
Translates to: AAQPTLLFVIPD*RVLSSAHPQAT
Trigger: AGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGAGGGCGCAGCTGGCATaGGCCAGGAGTCTACTCCCA +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLERAQLA*ARSLLP
Trigger: TGGGAGTAGACTCCTGGCTCATGCCAGCTGCGCCCT...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR TCA 90 bp CTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATAAAGGCCCTAGGAGGTaGCATTGTGGTCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LTCGCSAQHILKLLLSPHKGPRR*HCGLCS
Trigger: AGAACAGAGACCACAATGTCACCTCCTAGGGCCTTT...ATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTGGTCCAGCTCTCCGCTaGCAGGAGTTTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLGPALR*QEFGFS
Trigger: AGAGAAGCCAAACTCCTGGCAGCGGAGAGCTGGACC...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCGGGAGCACTGATAGATaGCTGGTGGGTGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSGSTDR*LVGGRA
Trigger: GGCCCTGCCACCCACCAGGCATCTATCAGTGCTCCC...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGACCAAACCAATGGCTTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTGGAGTCGCCTTTCGGGTaGCCCCACCCCCACGCCGTT +
Preference number: 4 (lower is better)
Translates to: RPNQWLPLFLWKSLLYWLESPFG*PHPHAV
Trigger: AACGGCGTGGGGGTGGGGGCACCCGAAAGGCGACTC...CAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAAGCCATTGGTTTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATCGCCGATTCTCTGAGTaGAGCCTCTGGTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNRRFSE*SLWWSF
Trigger: GAAGGACCACCAGAGGCTGCACTCAGAGAATCGGCG...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGACCAAACCAATGGCTTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTGCGCAACGCACAGCTGTaGGCCTGGACCGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RPNQWLPLFLWKSLLYWLRNAQL*AWTVQP
Trigger: GGGCTGGACGGTCCAGGCGCACAGCTGTGCGTTGCG...CAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAAGCCATTGGTTTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATTGGTGCTGCTGCTGGTaGTGCACGAAGCTGATTCGG +
Preference number: 4 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNWCCCW*CTKLIR
Trigger: CCGAATCAGCTTCGTGCAGCACCAGCAGCAGCACCA...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGACCAAACCAATGGCTTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTGCCACCGGTGGGGCTCTaGATCCGCCTCTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RPNQWLPLFLWKSLLYWLPPVGL*IRLSLV
Trigger: CACCAGGGAGAGGCGGATGCAGAGCCCCACCGGTGG...CAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAAGCCATTGGTTTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGGCTAATGACTGTTGTTaGTGCAGCTGGGCCTGGACT +
Preference number: 4 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGANDCC*CSWAWT
Trigger: AGTCCAGGCCCAGCTGCAGCAACAACAGTCATTAGC...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTAGAGCTCTGGGAGGCTaGGAAAGTGGCGCTGACAGT +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLRALGG*ESGADS
Trigger: ACTGTCAGCGCCACTTTCCCAGCCTCCCAGAGCTCT...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGAAAAGGCCAGTCTCGTaGGTCCGACGATGGTTAACC +
Preference number: 4 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGKRPVS*VRRWLT
Trigger: GGTTAACCATCGTCGGACCCACGAGACTGGCCTTTT...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTTGTGCCCATTGGTGGTaGGCATCCCTTTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLCAHWW*ASLSPP
Trigger: GGGAGGAGAAAGGGATGCCCACCACCAATGGGCACA...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATTGTCTTGTCTGCTGCTaGGGTGATGTCCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNCLVCC*GDVRGL
Trigger: GAGGCCACGGACATCACCCCAGCAGCAGACAAGACA...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTATGGCAGCCATGGTGTaGAAGTGCTTGGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLMAAMV*KCLAQA
Trigger: GGCCTGTGCCAAGCACTTCCACACCATGGCTGCCAT...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCTGTGCCGGCGCAAGTaGTTCTTCATGGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLLCRRK*FFMAAM
Trigger: CATGGCTGCCATGAAGAACCACTTGCGCCGGCACAG...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTGAAGAGGAGTTGGGTTaGCCAGTGGCTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLEEELG*PVAGFW
Trigger: CCAGAAGCCAGCCACTGGCCAACCCAACTCCTCTTC...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCCTCCCTCTTGAGACTTaGCATCTCCACCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFLPLET*HLHPLQ
Trigger: CTGGAGAGGGTGGAGATGCCAAGTCTCAAGAGGGAG...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGCGGCAGTCTCCAGCCTaGGCTCTATCTCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRRQSPA*ALSPPP
Trigger: AGGGGGAGGAGATAGAGCCCAGGCTGGAGACTGCCG...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGAGGGCCGCTCAGAGCTaGCTTCAGTCTGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRRAAQS*LQSGSP
Trigger: AGGGCTGCCAGACTGAAGCCAGCTCTGAGCGGCCCT...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGCATGGATGCGCCGGTaGTTCTTGAGGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNAWMRR*FLRDMR
Trigger: CCTCATGTCCCTCAAGAACCACCGGCGCATCCATGC...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGACCAAACCAATGGCTTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTGCCACGCCGTTCCATGTaGACCCGCTGGTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RPNQWLPLFLWKSLLYWLPRRSM*TRWWLA
Trigger: GGCCAGCCACCAGCGGGTCCACATGGAACGGCGTGG...CAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAAGCCATTGGTTTGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CTATTTGTTATACCTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTGGCCTCCCTGGCCATTaGCTGGCTCCCTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LFVIPDLRVLSSAHPQATGLPGH*LAPFLS
Trigger: AGACAGAAAGGGAGCCAGCCAATGGCCAGGGAGGCC...AGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCCATCCAGGCCTCCCTaGCCATTGGCTGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSPSRPP*PLAGSL
Trigger: AAGGGAGCCAGCCAATGGCCAGGGAGGCCTGGATGG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGCGTCTATGTGGTTGTaGCTGTGGCTCTTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEEASMWL*LWLFVA
Trigger: GGCCACAAAGAGCCACAGCCACAACCACATAGACGC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGGGCTTCCAGCAGTGCTaGGTGGAGGCGATTCCCCAC +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEGFQQC*VEAIPH
Trigger: GTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCC...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGTTGATAAGGCTGCCTaGGTGGCGATAGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFVDKAA*VAIALS
Trigger: GGAAAGAGCTATCGCCACTCAGGCAGCCTTATCAAC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCACAGGCCCCACAACTaGAGTCTCCTGTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEHRPHN*SLLSGG
Trigger: CCCACCAGACAGGAGACTTCAGTTGTGGGGCCTGTG...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCACCTCCCGCTGCAGCTaGTTCAGCAGCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSTSRCS*FSSSAS
Trigger: GGAAGCAGAGCTGCTGAATCAGCTGCAGCGGGAGGT...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGCCACCCTGTCATGTGTaGTTCCAGGCACCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRPPCHV*FQAPGQ
Trigger: CTGCCCTGGTGCCTGGAATCACACATGACAGGGTGG...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAACCAACCAGCTGCTaGCAGGGGACCTGGCCATTC +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEQPTSC*QGTWPF
Trigger: GAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTG...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp CGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGATGCAACCTACTTCTaGTCACAGACCTGTTATGTT +
Preference number: 4 (lower is better)
Translates to: RRERGTGSRVPTSEPVSVDATYF*SQTCYV
Trigger: AACATAACAGGTCTGTGATCAGAAGTAGGTTGCATC...CACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp CTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATGTCAAAAGGAAGGCCTaGATTAACTTCGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LTCGCSAQHILKLLLSPHVKRKA*INFASW
Trigger: CCAAGAGGCGAAGTTAATTCAGGCCTTCCTTTTGAC...ATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTGGAGCAGTTCTCGGTaGCGAGAGAGCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSWSSSR*RESSGR
Trigger: CCTCCCAGAGCTCTCTCGGCACCGAGAACTGCTCCA...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CTATTTGTTATACCTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTGCCATTCAGCATCTGTaGACTGGGGAGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LFVIPDLRVLSSAHPQATAIQHL*TGELVL
Trigger: CAGGACCAGCTCCCCAGTGCACAGATGCTGAATGGC...AGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTCAGCCCCGATGTCTaGACTTCGGCGAGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLELSPDV*TSASSL
Trigger: AAGGCTGCTCGCCGAAGTGCAGACATCGGGGCTGAG...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGCTCAGCCCCGATGTCTaGACTTCGGCGAGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRLSPDV*TSASSL
Trigger: AAGGCTGCTCGCCGAAGTGCAGACATCGGGGCTGAG...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CTATTTGTTATACCTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTGCTGTCTTGTCTGCTaGTGGGGTGATGTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: LFVIPDLRVLSSAHPQATCCLVC*WGDVRG
Trigger: GCCACGGACATCACCCCAGCAGCAGACAAGACAGCA...AGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGTCCCAAGGGGGTGCCTaGTCCCTCTTGAGACTTGGC +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRSQGGA*SLLRLG
Trigger: GCCAAGTCTCAAGAGGGAGCAGGCACCCCCTTGGGA...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTGGCCCGTCTCGTGGCTaGGCCGGTGGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFGPSRG*AGGSGG
Trigger: GCCTCCTGAACCACCGGCGCAGCCACGAGACGGGCC...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTGCTGCTGCTGGTGCTaGACGAAGCTGATTCGGCGG +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSCCCWC*TKLIRR
Trigger: CCGCCGAATCAGCTTCGTGCAGCACCAGCAGCAGCA...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTTGGTTGGGAGATGGATaGAGCAGTTCTCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLWLGDG*SSSRCR
Trigger: TCGGCACCGAGAACTGCTCCATCCATCTCCCAACCA...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGTCCTGGTTGGGAGATaGATGGAGCAGTTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNVLVGR*MEQFSV
Trigger: CACCGAGAACTGCTCCATCCATCTCCCAACCAGGAC...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGGACTGGGTGGGCTCCTaGCCCCCTGTGAAGTTCACT +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRDWVGS*PPVKFT
Trigger: AGTGAACTTCACAGGGGGCCAGGAGCCCACCCAGTC...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGAAGTCTCCTGTCTGGTaGGTCTGCCTGTGGTTGATA +
Preference number: 4 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGKSPVW*VCLWLI
Trigger: TATCAACCACAGGCAGACCCACCAGACAGGAGACTT...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGGCACTGATAGATGCCTaGTGGGTGGCAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRALIDA*WVAGPV
Trigger: CACAGGCCCTGCCACCCACCAGGCATCTATCAGTGC...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAAAGTCTCCAGTCTGGTaGATCTTGCGGTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEEKSPVW*ILRWFT
Trigger: GGTGAACCACCGCAAGATCCACCAGACTGGAGACTT...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTGCCTCCTTCTGGGATaGGCCCAACCTGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSCLLLG*AQPAAH
Trigger: GTGAGCTGCAGGTTGGGCCCATCCCAGAAGGAGGCA...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGTGCCTCCTTCTGGGATaGGCCCAACCTGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLECLLLG*AQPAAH
Trigger: GTGAGCTGCAGGTTGGGCCCATCCCAGAAGGAGGCA...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAACTTTAAGTTCTTCCTaGAGCTTCTCGACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSTLSSS*SFSTSA
Trigger: AGCAGAAGTCGAGAAGCTCCAGGAAGAACTTAAAGT...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTATTTGTTATACCTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTCCTCCCCCTTCACAGTaGTCTCCTCCCACACCTCTT +
Preference number: 4 (lower is better)
Translates to: LFVIPDLRVLSSAHPQATPPPSQ*SPPTPL
Trigger: AAGAGGTGTGGGAGGAGACCACTGTGAAGGGGGAGG...AGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGTCAGGGCCATGCGGTTaGAGTAGGTCTTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRSGPCG*SRSWGR
Trigger: CCTGCCCCAAGACCTACTCCAACCGCATGGCCCTGA...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGTGGGTCTCTAGTCCCTaGCTGCCAGTCAGGTTCGCC +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRWVSSP*LPVRFA
Trigger: GGCGAACCTGACTGGCAGCCAGGGACTAGAGACCCA...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATACTCCATCCTCCAAGTaGGGTACTGGCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNTPSSK*GTGSAP
Trigger: TGGTGCTGAGCCAGTACCCCACTTGGAGGATGGAGT...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGGTCTTGTTGGTGTTGTaGTTCAAGAGGCTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGVLLVL*FKRLPD
Trigger: GTCAGGCAGCCTCTTGAACCACAACACCAACAAGAC...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCGGCTTTGGGATCTCTaGCCTCCTCCATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSRLWDL*PPPSGL
Trigger: CAGCCCAGATGGAGGAGGCCAGAGATCCCAAAGCCG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGTATTCTCATCTGTCATaGCGGCCAAGACAGACCCTG +
Preference number: 4 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGYSHLS*RPRQTL
Trigger: CAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCACCGACTTTGGGGCTaGACTTCCCCCTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEHRLWG*TSPSTV
Trigger: CACAGTGGAGGGGGAAGTCCAGCCCCAAAGTCGGTG...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTAAAGGGTGGTTTGGTTaGATCCTAAAAAGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPKGWFG*ILKRPL
Trigger: CAACGGCCTTTTTAGGATCCAACCAAACCACCCTTT...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCTGCTTAGAACAGAGTaGGCAGGGGTAGACACCTGT +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLLLRTE*AGVDTC
Trigger: ACAGGTGTCTACCCCTGCTCACTCTGTTCTAAGCAG...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp CTCCTCCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTGGTTGCGCAGGGCCATaGGATTGGGGTACTTGCGGG +
Preference number: 4 (lower is better)
Translates to: LLLYPFRYNHASHVVLKIGCAGP*DWGTCG
Trigger: CCCGCAAGTACCCCAATCTCATGGCCCTGCGCAACC...AATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTTGCCTTCAGCCCCATaGGGACTTTCCCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSLPSAP*GLSPEG
Trigger: CCCTTCAGGGGAAAGTCCTCATGGGGCTGAAGGCAA...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp CTCCTCCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTGCCTCTGGGGGTTTCTaGTGGGGCCTCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLLYPFRYNHASHVVLKIASGGF*WGLLGF
Trigger: AAAGCCCAGGAGGCCCCATCAGAAACCCCCAGAGGC...AATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGCTACAGATATGTGCTaGTGTCTTGTCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFATDMC*CLVCCW
Trigger: CCAGCAGCAGACAAGACAGCAGCACATATCTGTAGC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCAGAGCAGCCCACAGATaGTACAGATATGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFRAAHR*YRYVLL
Trigger: CAGCAGCACATATCTGTAGCATCTGTGGGCTGCTCT...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGGCCATGGTGTGGAAGTaGTTGGCACAGGCCCCACAA +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEAMVWK*LAQAPQ
Trigger: TTGTGGGGCCTGTGCCAAGCACTTCCACACCATGGC...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTTTCCCCACCCTGGATaGAGAGGCTGTCTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSFPHPG*RGCLPR
Trigger: CCTTGGGAGACAGCCTCTGCATCCAGGGTGGGGAAA...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGTCTGGTGGATCTTaGGGTGGTTCACCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEQSGGS*GGSPGC
Trigger: GCAGCCTGGTGAACCACCGCAAGATCCACCAGACTG...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGACCAAACCAATGGCTTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTGGAGCTTCTCGACTTCTaGTTGCCCCGGCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RPNQWLPLFLWKSLLYWLELLDF*LPRPLL
Trigger: GAGGAGGGGCCGGGGCAAGCAGAAGTCGAGAAGCTC...CAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAAGCCATTGGTTTGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTGAGTCGCCTTTCGGGTaGCCCCACCCCCACGCCGTT +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFESPFG*PHPHAV
Trigger: AACGGCGTGGGGGTGGGGGCACCCGAAAGGCGACTC...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTGGTGCTGCTGCTGGTaGTGCACGAAGCTGATTCGG +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSWCCCW*CTKLIR
Trigger: CCGAATCAGCTTCGTGCAGCACCAGCAGCAGCACCA...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGGCCTCTCCCTGGTGTTaGAATCTGGCTGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEASPWC*NLAAEG
Trigger: ACCCTCAGCAGCCAGATTGCAACACCAGGGAGAGGC...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTTCCTGGGACCCTTCATaGCCCCTACCGGAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFSWDPS*PLPEPA
Trigger: GGCCGGCTCCGGTAGGGGGCATGAAGGGTCCCAGGA...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTGGACAGGGAGTAGGGTaGCAACCAGTGAACCAGTTT +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLGQGVG*QPVNQF
Trigger: AAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCC...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CTATTTGTTATACCTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTGTCCTGGTTGGGAGATaGATGGAGCAGTTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LFVIPDLRVLSSAHPQATVLVGR*MEQFSV
Trigger: CACCGAGAACTGCTCCATCCATCTCCCAACCAGGAC...AGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCGCCTCCTCACTGTCCTaGTTGGGAGATGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSASSLS*LGDGWS
Trigger: GCTCCATCCATCTCCCAACCAGGACAGTGAGGAGGC...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTAGCCTTCTCTTTGTCTaGTGGGCAGATCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLSLLFV*WADLPT
Trigger: CGTGGGAAGATCTGCCCACCAGACAAAGAGAAGGCT...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGTGTGCCCATTGGTGGTaGGCATCCCTTTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLECAHWW*ASLSPP
Trigger: GGGAGGAGAAAGGGATGCCCACCACCAATGGGCACA...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCGATGGTCCAGGGTGGTaGTGGGGTCCTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSDGPGW*WGPLPL
Trigger: AAGAGGAAGAGGACCCCACCACCACCCTGGACCATC...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCAATGTACCCGCACGTaGTTGCGCAGGGCCATGAGA +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSQCTRT*LRRAMR
Trigger: TCTCATGGCCCTGCGCAACCACGTGCGGGTACATTG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTCCCCTGAAGGGTCTTaGGGAGACTCCAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSSPEGS*GDSRPS
Trigger: TGAAGGCCTGGAGTCTCCCCAAGACCCTTCAGGGGA...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTAGTTGGGTTGGCCAGTaGCTGGCTTCTGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLSWVGQ*LASGLH
Trigger: ATGAAGACCAGAAGCCAGCCACTGGCCAACCCAACT...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCGAAGAGGAGTTGGGTTaGCCAGTGGCTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSEEELG*PVAGFW
Trigger: CCAGAAGCCAGCCACTGGCCAACCCAACTCCTCTTC...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGCAGGCCAGTGGCATaGGGGAAAGAATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSSRPVA*GKECPQ
Trigger: CTGTGGGCATTCTTTCCCCCATGCCACTGGCCTGCT...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGAGCAGGCCAGTGGCATaGGGGAAAGAATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRSRPVA*GKECPQ
Trigger: CTGTGGGCATTCTTTCCCCCATGCCACTGGCCTGCT...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGACCAAACCAATGGCTTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTGGGTAGGCAGCCAGGTTaGGGTAGCAGCGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RPNQWLPLFLWKSLLYWLGRQPG*GSSGSR
Trigger: TCTGCTCCCGCTGCTACCCCAACCTGGCTGCCTACC...CAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAAGCCATTGGTTTGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCACGGGTACAACCCTGTaGTGTGGGCCTTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSTGTTL*CGPSGG
Trigger: ACCACCAGAAGGCCCACACCACAGGGTTGTACCCGT...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGTGTGGGTCCTGCTGTaGTTCTTAAGAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNVWVLL*FLRDSR
Trigger: CCTGCTGTCTCTTAAGAACCACAGCAGGACCCACAC...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGAAGGTGTGCAGAGGGTaGCAGGGTGCGCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEKVCRG*QGAQVE
Trigger: TTCTACCTGCGCACCCTGCCACCCTCTGCACACCTT...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CTATTTGTTATACCTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCGGTGGCCACTAGATaGAATGGGTCCGCCTCTACT +
Preference number: 4 (lower is better)
Translates to: LFVIPDLRVLSSAHPQATSVATR*NGSAST
Trigger: AGTAGAGGCGGACCCATTCCATCTAGTGGCCACCGA...AGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCCAGTGACCTTCCCCTaGACAGAAAGACCATTCCAT +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLPVTFP*TERPFH
Trigger: ATGGAATGGTCTTTCTGTTCAGGGGAAGGTCACTGG...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGCCTCTTCTTCATGTTTaGACACATGGTCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGPLLHV*THGPDL
Trigger: CAGATCAGGACCATGTGTGCAAACATGAAGAAGAGG...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCCAGTCCTTCCCCAGTaGCTCCGCTCTCTTTATCAC +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSPVLPQ*LRSLYH
Trigger: GTGATAAAGAGAGCGGAGGCACTGGGGAAGGACTGG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCAGTCCTTCCCCAGTaGCTCCGCTCTCTTTATCAC +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEPVLPQ*LRSLYH
Trigger: GTGATAAAGAGAGCGGAGGCACTGGGGAAGGACTGG...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTCAGTGGTGGACTGCGTaGAGGGGCTGCCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFQWWTA*RGCLCH
Trigger: GTGGCAGAGGCAGCCCCTGCACGCAGTCCACCACTG...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTGATTCAGCAGCTCTaGTTCCGAGAGCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLELIQQL*FRELQW
Trigger: CCACTGCAGCTCTCGGAAGCAGAGCTGCTGAATCAG...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGCATGGCGATAGGTCTTaGCACACTGGTTGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRHGDRS*HTGCSG
Trigger: TCCGCTGCAACCAGTGTGGCAAGACCTATCGCCATG...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGACCAAACCAATGGCTTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTGTGCTGCTGCTGGTGCTaGACGAAGCTGATTCGGCGG +
Preference number: 4 (lower is better)
Translates to: RPNQWLPLFLWKSLLYWLCCCWC*TKLIRR
Trigger: CCGCCGAATCAGCTTCGTGCAGCACCAGCAGCAGCA...CAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAAGCCATTGGTTTGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTCCCACACCCAACTCTaGTACCAAGCAGGCGTCTCA +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSSHTQL*YQAGVS
Trigger: TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGA...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTACCTGACTTGCGGGTaGTCAGCTCAGCACATCCTC +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSYLTCG*SAQHIL
Trigger: GAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTA...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCCTCCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTAGCACCTTCCTCTGGTaGAGGGGCCAAGGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: LLLYPFRYNHASHVVLKISTFLW*RGQGPN
Trigger: GTTAGGGCCTTGGCCCCTCCACCAGAGGAAGGTGCT...AATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CCA 90 bp CTATTTGTTATACCTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTCCTCACTGTCCTGGTTaGGAGATGGATGGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LFVIPDLRVLSSAHPQATPHCPG*EMDGAV
Trigger: AACTGCTCCATCCATCTCCCAACCAGGACAGTGAGG...AGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTGTGTGCCCATTGGTaGTGGGCATCCCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLELCAHW*WASLSP
Trigger: AGGAGAAAGGGATGCCCACCACCAATGGGCACACAG...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTGAAGTCTCCTGTCTaGTGGGTCTGCCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLELKSPV*WVCLWL
Trigger: CAACCACAGGCAGACCCACCAGACAGGAGACTTCAG...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCTCCCTCTTGAGACTTaGCATCTCCACCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSLPLET*HLHPLQ
Trigger: CTGGAGAGGGTGGAGATGCCAAGTCTCAAGAGGGAG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGAAACTTTCCCCACCCTaGATGCAGAGGCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRKLSPP*MQRLSP
Trigger: GGGAGACAGCCTCTGCATCCAGGGTGGGGAAAGTTT...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGGGTTTGAGAAGCCCTTaGAGCAGGCCTGACAGCCAA +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEGLRSP*SRPDSQ
Trigger: TTGGCTGTCAGGCCTGCTCCAAGGGCTTCTCAAACC...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCCTCCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTGGGTCTCTAGTCCCTaGCTGCCAGTCAGGTTCGCC +
Preference number: 4 (lower is better)
Translates to: LLLYPFRYNHASHVVLKIWVSSP*LPVRFA
Trigger: GGCGAACCTGACTGGCAGCCAGGGACTAGAGACCCA...AATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTCAGCACCACCCAATTaGGTCTCTAGTCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSSAPPN*VSSPWL
Trigger: CAGCCAGGGACTAGAGACCCAATTGGGTGGTGCTGA...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCTCCAAGTGGGGTACTaGCTCAGCACCACCCAATTG +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSLQVGY*LSTTQL
Trigger: CAATTGGGTGGTGCTGAGCCAGTACCCCACTTGGAG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCCTCCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTCGGCTTTGGGATCTCTaGCCTCCTCCATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLLYPFRYNHASHVVLKIRLWDL*PPPSGL
Trigger: CAGCCCAGATGGAGGAGGCCAGAGATCCCAAAGCCG...AATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTTGCAGCAGTGGCGCTTaGGGTCCGTGTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFCSSGA*GPCGSC
Trigger: GCAGGACCCACACGGACCCCAAGCGCCACTGCTGCA...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGTCCTGGTGCTGCTGCTaGTGCTGCACGAAGCTGATT +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRSWCCC*CCTKLI
Trigger: AATCAGCTTCGTGCAGCACCAGCAGCAGCACCAGGA...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
3UTR CAA 72 bp CAACAGGCAGACCCATTTGATTCAGATTCTGGTTCTTaGTCATCGTGTGACTTGGAGCAGGCTGCTCAACCG +
Preference number: 4 (lower is better)
Translates to: QQADPFDSDSGS*SSCDLEQAAQP
Trigger: CGGTTGAGCAGCCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp CTCCTCCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTGAGGGACATGAGGTTTaGGAAGCCCTTGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LLLYPFRYNHASHVVLKIEGHEV*EALGAG
Trigger: GCCTGCTCCAAGGGCTTCTCAAACCTCATGTCCCTC...AATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGACCTGGGTGGCTTaGCAAGCCTTCTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSRTWVA*QAFSLS
Trigger: AGACAAAGAGAAGGCTTGGCAAGCCACCCAGGTCCT...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CTCCTCCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCACCCTCATGGGACTaGTGGTGTTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLLYPFRYNHASHVVLKISPSWD*WCSSSS
Trigger: GGAGCTGCTGGAACACCAGCAGTCCCATGAGGGTGA...AATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCACGACCACACTCACTaGACTTATAGGGCCGATGGT +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSHDHTH*TYRADG
Trigger: ACCATCGGCCCTATAAGTGCAGTGAGTGTGGTCGTG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCCCTCTTCTTCATGTTTaGACACATGGTCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFPLLHV*THGPDL
Trigger: CAGATCAGGACCATGTGTGCAAACATGAAGAAGAGG...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCCTCACTGTCCTGGTTaGGAGATGGATGGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSPHCPG*EMDGAV
Trigger: AACTGCTCCATCCATCTCCCAACCAGGACAGTGAGG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTTCGTGGGTCCGACGATaGTTAACCAGGCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFSWVRR*LTRLPG
Trigger: CCCCGGGAGCCTGGTTAACCATCGTCGGACCCACGA...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTGGCCCCAGGAGTCAGTaGACACCGTCTCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFGPRSQ*TPSHPG
Trigger: TCCAGGGTGAGACGGTGTCCACTGACTCCTGGGGCC...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGCCTTCTCTTTGTCTaGTGGGCAGATCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSSLLFV*WADLPT
Trigger: CGTGGGAAGATCTGCCCACCAGACAAAGAGAAGGCT...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGGCATGCAGTCGAGAGTaGTTCTTCAGAGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEACSRE*FFRAMR
Trigger: CCTCATGGCTCTGAAGAACCACTCTCGACTGCATGC...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGACCAAACCAATGGCTTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTGTGTCTTGTCTGCTGCTaGGGTGATGTCCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RPNQWLPLFLWKSLLYWLCLVCC*GDVRGL
Trigger: GAGGCCACGGACATCACCCCAGCAGCAGACAAGACA...CAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAAGCCATTGGTTTGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGTCTTCATGGCAGCCATaGTGTGGAAGTGCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRSSWQP*CGSAWH
Trigger: GTGCCAAGCACTTCCACACCATGGCTGCCATGAAGA...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCTCTCTTTATCACCCTaGAAATGGGTCTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLLSLSP*KWVSSL
Trigger: GAGGGATGAGACCCATTTCCAGGGTGATAAAGAGAG...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCCTCCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTCCAGTGGCTGGCTTCTaGTCTTCATCCACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LLLYPFRYNHASHVVLKIPVAGF*SSSTPV
Trigger: CACTGGGGTGGATGAAGACCAGAAGCCAGCCACTGG...AATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGACCAAACCAATGGCTTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTGGGGTTGGCCAGTGGCTaGCTTCTGGTCTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: RPNQWLPLFLWKSLLYWLGLASG*LLVFIH
Trigger: GTGGATGAAGACCAGAAGCCAGCCACTGGCCAACCC...CAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAAGCCATTGGTTTGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGTCCTCATATGGCTCTTaGGAGCCATGGGATTGGAGA +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLESSYGS*EPWDWR
Trigger: TCTCCAATCCCATGGCTCTCAAGAGCCATATGAGGA...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CTCCTCCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTCTGATTCAGCAGCTCTaGTTCCGAGAGCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLLYPFRYNHASHVVLKILIQQL*FRELQW
Trigger: CCACTGCAGCTCTCGGAAGCAGAGCTGCTGAATCAG...AATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTCTCACTGCTACCTGCTaGCTCTGGGATGGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFLTATC*LWDGPN
Trigger: GTTGGGCCCATCCCAGAGGCAGCAGGTAGCAGTGAG...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTGACACCGTCTCACCCTaGAGGTGTGGAGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFDTVSP*RCGVAS
Trigger: GGAAGCCACTCCACACCTCCAGGGTGAGACGGTGTC...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTCTGGGGAGCTGGTCCTaGCTGCTCTCATCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFLGSWS*LLSSVC
Trigger: GCACACAGATGAGAGCAGCCAGGACCAGCTCCCCAG...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCCTCCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTACTCTCCAGTCCGATaGCTGTGGCGATGGTTCACC +
Preference number: 4 (lower is better)
Translates to: LLLYPFRYNHASHVVLKIYSPVR*LWRWFT
Trigger: GGTGAACCATCGCCACAGCCATCGGACTGGAGAGTA...AATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGAAGTCTCCTGTCTGGTaGGTCTGCCTGTGGTTGATA +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEKSPVW*VCLWLI
Trigger: TATCAACCACAGGCAGACCCACCAGACAGGAGACTT...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAAGTTGTCAAGTAAACTaGCATCCTTCCTTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: LSILICHGGQDRPCSFEESCQVN*HPSFPV
Trigger: GACTGGAAAGGAAGGATGCCAGTTTACTTGACAACT...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTGAGCTGGCTTCAGTCTaGCAGCCCTTCTCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFELASV*QPFSAV
Trigger: GACTGCCGAGAAGGGCTGCCAGACTGAAGCCAGCTC...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTGGCCTCCCTGGCCATTaGCTGGCTCCCTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFGLPGH*LAPFLS
Trigger: AGACAGAAAGGGAGCCAGCCAATGGCCAGGGAGGCC...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGACCAAACCAATGGCTTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTGCTCCAAGTGGGGTACTaGCTCAGCACCACCCAATTG +
Preference number: 4 (lower is better)
Translates to: RPNQWLPLFLWKSLLYWLLQVGY*LSTTQL
Trigger: CAATTGGGTGGTGCTGAGCCAGTACCCCACTTGGAG...CAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAAGCCATTGGTTTGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGGTCTTGTTGGTGTTGTaGTTCAAGAGGCTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEVLLVL*FKRLPD
Trigger: GTCAGGCAGCCTCTTGAACCACAACACCAACAAGAC...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR TCA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTTGTGAAGTTCACTACTaGTTCAGCCAGATACTGTTC +
Preference number: 4 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLCEVHY*FSQILF
Trigger: GAACAGTATCTGGCTGAATCAGTAGTGAACTTCACA...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCTCTGTATGTTTTGTCTaGTTTTCCCAGCCTTCACTA +
Preference number: 4 (lower is better)
Translates to: LSLSILICHGGQDRPCSFSVCFV*FSQPSL
Trigger: TAGTGAAGGCTGGGAAAACCAGACAAAACATACAGA...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCTCTCTTTATCACCCTaGAAATGGGTCTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: QADPFDSDSGSLSSCDLELSLSP*KWVSSL
Trigger: GAGGGATGAGACCCATTTCCAGGGTGATAAAGAGAG...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTCCTCCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTGTCTGGGCGTCTATGTaGTTGTGGCTGTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LLLYPFRYNHASHVVLKIVWASM*LWLWLF
Trigger: AAAGAGCCACAGCCACAACCACATAGACGCCCAGAC...AATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGTGCTGCAGCTGGGCCTaGACTTCAAGGAAACAATTA +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRCCSWA*TSRKQL
Trigger: TAATTGTTTCCTTGAAGTCCAGGCCCAGCTGCAGCA...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGAAACAATTATCTGTaGCTCAGTCCTCCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNGNNYL*LSPPVK
Trigger: TTTAACTGGAGGACTGAGTCACAGATAATTGTTTCC...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTTGGTTGGGAGATGGATaGAGCAGTTCTCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFWLGDG*SSSRCR
Trigger: TCGGCACCGAGAACTGCTCCATCCATCTCCCAACCA...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp AGACCAAACCAATGGCTTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTGAGAAAGTCTCCAGTCTaGTGGATCTTGCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RPNQWLPLFLWKSLLYWLRKSPV*WILRWF
Trigger: GAACCACCGCAAGATCCACCAGACTGGAGACTTTCT...CAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAAGCCATTGGTTTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTTCAGCACCACCCAATTaGGTCTCTAGTCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFSAPPN*VSSPWL
Trigger: CAGCCAGGGACTAGAGACCCAATTGGGTGGTGCTGA...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CTATTTGTTATACCTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTAAGTCATTACTTTACTaGCTGACTCAGGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LFVIPDLRVLSSAHPQATKSLLY*LTQEGF
Trigger: GAAACCCTCCTGAGTCAGCCAGTAAAGTAATGACTT...AGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR TCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGTGTGAAGTTCACTACTaGTTCAGCCAGATACTGTTC +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRCEVHY*FSQILF
Trigger: GAACAGTATCTGGCTGAATCAGTAGTGAACTTCACA...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTTATCGCAGAAGTGAGTaGCACCACCTTCCTCACCTG +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFYRRSE*HHLPHL
Trigger: CAGGTGAGGAAGGTGGTGGCACTCACTTCTGCGATA...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR GCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTGCTGAGCCTGGAAGCTaGCTGGCCAACATAAGTATG +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFAEPGS*LANISM
Trigger: CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGC...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR GCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGCTACTAGATCCAATCTaGAGGCACCATCATTTAAGG +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRLLDPI*RHHHLR
Trigger: CCTTAAATGATGGTGCCTGCAGATTGGATCTAGTAG...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGAGTTGTCAAGTAAACTaGCATCCTTCCTTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRSCQVN*HPSFPV
Trigger: GACTGGAAAGGAAGGATGCCAGTTTACTTGACAACT...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGACTTTAAGTTCTTCCTaGAGCTTCTCGACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRTLSSS*SFSTSA
Trigger: AGCAGAAGTCGAGAAGCTCCAGGAAGAACTTAAAGT...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CCA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTTCTGTATGTTTTGTCTaGTTTTCCCAGCCTTCACTA +
Preference number: 4 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFSVCFV*FSQPSL
Trigger: TAGTGAAGGCTGGGAAAACCAGACAAAACATACAGA...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp GGGTCCAGCTCTCCGCTGCCAGGAGTTTGGCTTCTCTCCCACCGCTaGCACCGCCAGCCCGCTTCCGATGCCGCCTGCTCCGCCGCCGAC +
Preference number: 5 (lower is better)
Translates to: GSSSPLPGVWLLSHR*HRQPASDAACSAAD
Trigger: GTCGGCGGCGGAGCAGGCGGCATCGGAAGCGGGCTGGCGGTGCCAGCGGTGGGAGAGAAGCCAAACTCCTGGCAGCGGAGAGCTGGACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp CCCGGCCAGGGAAGCTGCGGCCACAGAGGGCGCAACGCACAGCTGTaGGCCTGGACCGTCCAGCCCGTCGCCGCCGATTCTCTGAGTGCA +
Preference number: 5 (lower is better)
Translates to: PGQGSCGHRGRNAQL*AWTVQPVAADSLSA
Trigger: TGCACTCAGAGAATCGGCGGCGACGGGCTGGACGGTCCAGGCGCACAGCTGTGCGTTGCGCCCTCTGTGGCCGCAGCTTCCCTGGCCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp TCCCGAGTCGCCTTTCGGGTGCCCCCACCCCCACGCCGTTCCATGTaGACCCGCTGGTGGCTGGCCAGCTGTTTCCGCAGGCGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SRVAFRVPPPPRRSM*TRWWLASCFRRRKA
Trigger: GGCCTTCCGCCTGCGGAAACAGCTGGCCAGCCACCAGCGGGTCCACATGGAACGGCGTGGGGGTGGGGGCACCCGAAAGGCGACTCGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp ACTGCCCACAGCGGAAGGGCCGATCTTCCCGAGTCGCCTTTCGGGTaGCCCCACCCCCACGCCGTTCCATGTGGACCCGCTGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: TAHSGRADLPESPFG*PHPHAVPCGPAGGW
Trigger: CCAGCCACCAGCGGGTCCACATGGAACGGCGTGGGGGTGGGGGCACCCGAAAGGCGACTCGGGAAGATCGGCCCTTCCGCTGTGGGCAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp CATGCTCCCGCAGGTGCCGCTCCAAAGATCCCCGGCCAGGGAAGCTaGGGCCACAGAGGGCGCAACGCACAGCTGTGCGCCTGGACCGTC +
Preference number: 5 (lower is better)
Translates to: HAPAGAAPKIPGQGS*GHRGRNAQLCAWTV
Trigger: GACGGTCCAGGCGCACAGCTGTGCGTTGCGCCCTCTGTGGCCGCAGCTTCCCTGGCCGGGGATCTTTGGAGCGGCACCTGCGGGAGCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp GCACCGCCAGCCCGCTTCCGATGCCGCCTGCTCCGCCGCCGACTGTaGCGGCGCAAGTGGTTCTTCATGGCAGCCATGGTGTGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: APPARFRCRLLRRRL*RRKWFFMAAMVWKC
Trigger: GCACTTCCACACCATGGCTGCCATGAAGAACCACTTGCGCCGGCACAGTCGGCGGCGGAGCAGGCGGCATCGGAAGCGGGCTGGCGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CAGGGAAGCTGCGGCCACAGAGGGCGCAACGCACAGCTGTGCGCCTaGACCGTCCAGCCCGTCGCCGCCGATTCTCTGAGTGCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: QGSCGHRGRNAQLCA*TVQPVAADSLSAAS
Trigger: AGAGGCTGCACTCAGAGAATCGGCGGCGACGGGCTGGACGGTCCAGGCGCACAGCTGTGCGTTGCGCCCTCTGTGGCCGCAGCTTCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp GGACACCGTCTCACCCTGGAGGTGTGGAGTGGCTTCCTTGGGGCGTaGGGGCCTGTGCCTGCGGCGGCCCTCAGGAGCATGTGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: GHRLTLEVWSGFLGA*GPVPAAALRSMCPH
Trigger: ATGAGGACACATGCTCCTGAGGGCCGCCGCAGGCACAGGCCCCCACGCCCCAAGGAAGCCACTCCACACCTCCAGGGTGAGACGGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CCA 90 bp AGTCAGTGGACACCGTCTCACCCTGGAGGTGTGGAGTGGCTTCCTTaGGGCGTGGGGGCCTGTGCCTGCGGCGGCCCTCAGGAGCATGTG +
Preference number: 5 (lower is better)
Translates to: SQWTPSHPGGVEWLP*GVGACACGGPQEHV
Trigger: CACATGCTCCTGAGGGCCGCCGCAGGCACAGGCCCCCACGCCCCAAGGAAGCCACTCCACACCTCCAGGGTGAGACGGTGTCCACTGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CCA 90 bp GCAGCCTCTGGTGGTCCTTCAGGGCCATGCGGTTGGAGTAGGTCTTaGGGCAGGTGGGGCAGCTGTACTGGCCCGTCTCGTGGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: AASGGPSGPCGWSRS*GRWGSCTGPSRGCA
Trigger: GGCGCAGCCACGAGACGGGCCAGTACAGCTGCCCCACCTGCCCCAAGACCTACTCCAACCGCATGGCCCTGAAGGACCACCAGAGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp GCTGCCTCTGCCTCCACTGGGTCAGGCGGGAGTTCTACCTTGAGGTaGCTGGGGGCACCCTCAGCCCCGATGTCTGCACTTCGGCGAGCA +
Preference number: 5 (lower is better)
Translates to: AASASTGSGGSSTLR*LGAPSAPMSALRRA
Trigger: TGCTCGCCGAAGTGCAGACATCGGGGCTGAGGGTGCCCCCAGCCACCTCAAGGTAGAACTCCCGCCTGACCCAGTGGAGGCAGAGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CGCTTCCGATGCCGCCTGCTCCGCCGCCGACTGTGCCGGCGCAAGTaGTTCTTCATGGCAGCCATGGTGTGGAAGTGCTTGGCACAGGCC +
Preference number: 5 (lower is better)
Translates to: RFRCRLLRRRLCRRK*FFMAAMVWKCLAQA
Trigger: GGCCTGTGCCAAGCACTTCCACACCATGGCTGCCATGAAGAACCACTTGCGCCGGCACAGTCGGCGGCGGAGCAGGCGGCATCGGAAGCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp GGTGGTCCTTCAGGGCCATGCGGTTGGAGTAGGTCTTGGGGCAGGTaGGGCAGCTGTACTGGCCCGTCTCGTGGCTGCGCCGGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: GGPSGPCGWSRSWGR*GSCTGPSRGCAGGS
Trigger: TGAACCACCGGCGCAGCCACGAGACGGGCCAGTACAGCTGCCCCACCTGCCCCAAGACCTACTCCAACCGCATGGCCCTGAAGGACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp GCCTCCTTCTGGGATGGGCCCAACCTGCAGCTCACTGCTACCTGCTaGCTCTGGGATGGGCCCAACCTGGGGCTCAGAGCCTTTGCAGCG +
Preference number: 5 (lower is better)
Translates to: ASFWDGPNLQLTATC*LWDGPNLGLRAFAA
Trigger: CGCTGCAAAGGCTCTGAGCCCCAGGTTGGGCCCATCCCAGAGGCAGCAGGTAGCAGTGAGCTGCAGGTTGGGCCCATCCCAGAAGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp TGGCCATTGGCTGGCTCCCTTTCTGTCTCCTCATGCTCCCGCAGGTaGCGCTCCAAAGATCCCCGGCCAGGGAAGCTGCGGCCACAGAGG +
Preference number: 5 (lower is better)
Translates to: WPLAGSLSVSSCSRR*RSKDPRPGKLRPQR
Trigger: CCTCTGTGGCCGCAGCTTCCCTGGCCGGGGATCTTTGGAGCGGCACCTGCGGGAGCATGAGGAGACAGAAAGGGAGCCAGCCAATGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp GCCGATGGTCCAGGGTGGTGGTGGGGTCCTCTTCCTCTTTGTGGGTaGTCTCAGCCAGCAGCAGGGGAGCTGGTGGGACTGATGGCTGCC +
Preference number: 5 (lower is better)
Translates to: ADGPGWWWGPLPLCG*SQPAAGELVGLMAA
Trigger: GGCAGCCATCAGTCCCACCAGCTCCCCTGCTGCTGGCTGAGACCACCCACAAAGAGGAAGAGGACCCCACCACCACCCTGGACCATCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp GCACACATGGTCCTGATCTGTGTGCGGGGCTGCCTCTGCCTCCACTaGGTCAGGCGGGAGTTCTACCTTGAGGTGGCTGGGGGCACCCTC +
Preference number: 5 (lower is better)
Translates to: AHMVLICVRGCLCLH*VRREFYLEVAGGTL
Trigger: GAGGGTGCCCCCAGCCACCTCAAGGTAGAACTCCCGCCTGACCCAGTGGAGGCAGAGGCAGCCCCGCACACAGATCAGGACCATGTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CGGCCCCTCCTCTGCCATGTGCTGGGGCTTGTTGCTGCCTCCTTCTaGGATGGGCCCAACCTGCAGCTCACTGCTACCTGCTGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: RPLLCHVLGLVAASF*DGPNLQLTATCCLW
Trigger: CCAGAGGCAGCAGGTAGCAGTGAGCTGCAGGTTGGGCCCATCCCAGAAGGAGGCAGCAACAAGCCCCAGCACATGGCAGAGGAGGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp GCTGTGCTGAGGTCGCCTCCCCAGGCCTATGGTTCTGGAAGTGGCTaGGGAGGGCAGGCAGAGAGTCAAACTCCTTCGGGCAGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: AVLRSPPQAYGSGSG*GGQAESQTPSGRGS
Trigger: GCTCCCTCTGCCCGAAGGAGTTTGACTCTCTGCCTGCCCTCCGCAGCCACTTCCAGAACCATAGGCCTGGGGAGGCGACCTCAGCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp ACTGTCCAGCGCTTCCACCTCCCGCTGCAGCTGATTCAGCAGCTCTaGTTCCGAGAGCTGCAGTGGTGGACTGCGTGCAGGGGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: TVQRFHLPLQLIQQL*FRELQWWTACRGCL
Trigger: GAGGCAGCCCCTGCACGCAGTCCACCACTGCAGCTCTCGGAAGCAGAGCTGCTGAATCAGCTGCAGCGGGAGGTGGAAGCGCTGGACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp GCTTGTTGCTGCCTCCTTCTGGGATGGGCCCAACCTGCAGCTCACTaGTACCTGCTGCCTCTGGGATGGGCCCAACCTGGGGCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: ACCCLLLGWAQPAAH*YLLPLGWAQPGAQS
Trigger: GCTCTGAGCCCCAGGTTGGGCCCATCCCAGAGGCAGCAGGTAGCAGTGAGCTGCAGGTTGGGCCCATCCCAGAAGGAGGCAGCAACAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp GGGGTACTGGCTCAGCACCACCCAATTGGGTCTCTAGTCCCTGGCTaGCAGTCAGGTTCGCCTCACTGGCCGCTGTGCCATCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: GVLAQHHPIGSLVPG*QSGSPHWPLCHPGL
Trigger: GAGGCCTGGATGGCACAGCGGCCAGTGAGGCGAACCTGACTGGCAGCCAGGGACTAGAGACCCAATTGGGTGGTGCTGAGCCAGTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CCGCTGCAGCTGATTCAGCAGCTCTGCTTCCGAGAGCTGCAGTGGTaGACTGCGTGCAGGGGCTGCCTCTGCCACTCCTTCCTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: PLQLIQQLCFRELQW*TACRGCLCHSFLFP
Trigger: GGGGAAGAGGAAGGAGTGGCAGAGGCAGCCCCTGCACGCAGTCCACCACTGCAGCTCTCGGAAGCAGAGCTGCTGAATCAGCTGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CCACACACCTCGCAGCTGAAGGGCCGCTCAGAGCTGGCTTCAGTCTaGCAGCCCTTCTCGGCAGTCTCCAGCCTGGGCTCTATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PHTSQLKGRSELASV*QPFSAVSSLGSISS
Trigger: GGAGGAGATAGAGCCCAGGCTGGAGACTGCCGAGAAGGGCTGCCAGACTGAAGCCAGCTCTGAGCGGCCCTTCAGCTGCGAGGTGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCCTTCGGCGAGCAGCCTaGCAATGTACCCGCACGTGG +
Preference number: 5 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPLRRAA*QCTRTW
Trigger: CCACGTGCGGGTACATTGCAAGGCTGCTCGCCGAAG...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS GCA 90 bp GACGGTAGCCCCGCCCACACTGCTGACAACGGTAGGGCCGAGGGATaGTGTCAGCCTCCTCACTGTCCTGGTTGGGAGATGGATGGAGCA +
Preference number: 5 (lower is better)
Translates to: DGSPAHTADNGRAEG*CQPPHCPGWEMDGA
Trigger: TGCTCCATCCATCTCCCAACCAGGACAGTGAGGAGGCTGACAGCATCCCTCGGCCCTACCGTTGTCAGCAGTGTGGGCGGGGCTACCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS GCA 90 bp GAGTTCTACCTTGAGGTGGCTGGGGGCACCCTCAGCCCCGATGTCTaGACTTCGGCGAGCAGCCTTGCAATGTACCCGCACGTGGTTGCG +
Preference number: 5 (lower is better)
Translates to: EFYLEVAGGTLSPDV*TSASSLAMYPHVVA
Trigger: CGCAACCACGTGCGGGTACATTGCAAGGCTGCTCGCCGAAGTGCAGACATCGGGGCTGAGGGTGCCCCCAGCCACCTCAAGGTAGAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CTCCCGCTGCAGCTGATTCAGCAGCTCTGCTTCCGAGAGCTGCAGTaGTGGACTGCGTGCAGGGGCTGCCTCTGCCACTCCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LPLQLIQQLCFRELQ*WTACRGCLCHSFLF
Trigger: GAAGAGGAAGGAGTGGCAGAGGCAGCCCCTGCACGCAGTCCACCACTGCAGCTCTCGGAAGCAGAGCTGCTGAATCAGCTGCAGCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CCTCCTCTGCCATGTGCTGGGGCTTGTTGCTGCCTCCTTCTGGGATaGGCCCAACCTGCAGCTCACTGCTACCTGCTGCCTCTGGGATGG +
Preference number: 5 (lower is better)
Translates to: PPLPCAGACCCLLLG*AQPAAHCYLLPLGW
Trigger: CCATCCCAGAGGCAGCAGGTAGCAGTGAGCTGCAGGTTGGGCCCATCCCAGAAGGAGGCAGCAACAAGCCCCAGCACATGGCAGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGGCGGGAGTTCTACCTaGAGGTGGCTGGGGGCACCC +
Preference number: 5 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSGGSST*RWLGAP
Trigger: GGGTGCCCCCAGCCACCTCAAGGTAGAACTCCCGCC...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCACTGCAGCAGTGGCGCTaGGGGTCCGTGTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSLQQWR*GSVWVL
Trigger: CAGGACCCACACGGACCCCAAGCGCCACTGCTGCAG...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGCTGCAGCAGTGGCGCTaGGGGTCCGTGTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: RRERGTGSRVPTSEPVSVLQQWR*GSVWVL
Trigger: CAGGACCCACACGGACCCCAAGCGCCACTGCTGCAG...CACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGCCCATGCCCCATCCCTaGTTCCCTGGCACCCGGCCT +
Preference number: 5 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQPMPHP*FPGTRP
Trigger: AGGCCGGGTGCCAGGGAACAAGGGATGGGGCATGGG...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS TCA 90 bp AGGCCAGTGGCATGGGGGAAAGAATGCCCACAGTCAGAGCATGTGTaGGCGGCCCCAGCCTGCCAGCCAGTGACAGCATTGGCAGAGTGG +
Preference number: 5 (lower is better)
Translates to: RPVAWGKECPQSEHV*AAPACQPVTALAEW
Trigger: CCACTCTGCCAATGCTGTCACTGGCTGGCAGGCTGGGGCCGCTCACACATGCTCTGACTGTGGGCATTCTTTCCCCCATGCCACTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp GGAGGGTCCCCAGCCGTCTGCACCATCCTCAGGACCTGGGTGGCTTaGCAAGCCTTCTCTTTGTCTGGTGGGCAGATCTTCCCACGTACC +
Preference number: 5 (lower is better)
Translates to: GGSPAVCTILRTWVA*QAFSLSGGQIFPRT
Trigger: GGTACGTGGGAAGATCTGCCCACCAGACAAAGAGAAGGCTTGGCAAGCCACCCAGGTCCTGAGGATGGTGCAGACGGCTGGGGACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS GCA 90 bp GAGAGGAGGGGCTCTGGCAGAGTTAGTGGAGGGTCCCCAGCCGTCTaGACCATCCTCAGGACCTGGGTGGCTTGCCAAGCCTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: ERRGSGRVSGGSPAV*TILRTWVACQAFSL
Trigger: CAAAGAGAAGGCTTGGCAAGCCACCCAGGTCCTGAGGATGGTGCAGACGGCTGGGGACCCTCCACTAACTCTGCCAGAGCCCCTCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS GCA 90 bp AGCATCTGTGCACTGGGGAGCTGGTCCTGGCTGCTCTCATCTGTGTaGCCATTGGTGGTGGGCATCCCTTTCTCCTCCCAGCGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: SICALGSWSWLLSSV*PLVVGIPFSSQRGS
Trigger: GGAGCCACGCTGGGAGGAGAAAGGGATGCCCACCACCAATGGGCACACAGATGAGAGCAGCCAGGACCAGCTCCCCAGTGCACAGATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp GGGGGCCTGTGCCTGCGGCGGCCCTCAGGAGCATGTGTCCTCATATaGCTCTTGAGAGCCATGGGATTGGAGAAGTCCTTGCCACAGGTG +
Preference number: 5 (lower is better)
Translates to: GGLCLRRPSGACVLI*LLRAMGLEKSLPQV
Trigger: CACCTGTGGCAAGGACTTCTCCAATCCCATGGCTCTCAAGAGCCATATGAGGACACATGCTCCTGAGGGCCGCCGCAGGCACAGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CCA 90 bp GTGCACTGGGGAGCTGGTCCTGGCTGCTCTCATCTGTGTGCCCATTaGTGGTGGGCATCCCTTTCTCCTCCCAGCGTGGCTCCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: VHWGAGPGCSHLCAH*WWASLSPPSVAPAF
Trigger: AAAGGCAGGAGCCACGCTGGGAGGAGAAAGGGATGCCCACCACCAATGGGCACACAGATGAGAGCAGCCAGGACCAGCTCCCCAGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp AAAGGCTGTGCTGAGGTCGCCTCCCCAGGCCTATGGTTCTGGAAGTaGCTGCGGAGGGCAGGCAGAGAGTCAAACTCCTTCGGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: KGCAEVASPGLWFWK*LRRAGRESNSFGQR
Trigger: CCTCTGCCCGAAGGAGTTTGACTCTCTGCCTGCCCTCCGCAGCCACTTCCAGAACCATAGGCCTGGGGAGGCGACCTCAGCACAGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CAGAGGAAAGGCTGTGCTGAGGTCGCCTCCCCAGGCCTATGGTTCTaGAAGTGGCTGCGGAGGGCAGGCAGAGAGTCAAACTCCTTCGGG +
Preference number: 5 (lower is better)
Translates to: QRKGCAEVASPGLWF*KWLRRAGRESNSFG
Trigger: CCCGAAGGAGTTTGACTCTCTGCCTGCCCTCCGCAGCCACTTCCAGAACCATAGGCCTGGGGAGGCGACCTCAGCACAGCCTTTCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CAGAGCTGGCTTCAGTCTGGCAGCCCTTCTCGGCAGTCTCCAGCCTaGGCTCTATCTCCTCCCCCTTCACAGTGGTCTCCTCCCACACCT +
Preference number: 5 (lower is better)
Translates to: QSWLQSGSPSRQSPA*ALSPPPSQWSPPTP
Trigger: AGGTGTGGGAGGAGACCACTGTGAAGGGGGAGGAGATAGAGCCCAGGCTGGAGACTGCCGAGAAGGGCTGCCAGACTGAAGCCAGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp AAGTGGGGTACTGGCTCAGCACCACCCAATTGGGTCTCTAGTCCCTaGCTGCCAGTCAGGTTCGCCTCACTGGCCGCTGTGCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: KWGTGSAPPNWVSSP*LPVRFASLAAVPSR
Trigger: CCTGGATGGCACAGCGGCCAGTGAGGCGAACCTGACTGGCAGCCAGGGACTAGAGACCCAATTGGGTGGTGCTGAGCCAGTACCCCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp GGGACTCCATCCTCCAAGTGGGGTACTGGCTCAGCACCACCCAATTaGGTCTCTAGTCCCTGGCTGCCAGTCAGGTTCGCCTCACTGGCC +
Preference number: 5 (lower is better)
Translates to: GTPSSKWGTGSAPPN*VSSPWLPVRFASLA
Trigger: GGCCAGTGAGGCGAACCTGACTGGCAGCCAGGGACTAGAGACCCAATTGGGTGGTGCTGAGCCAGTACCCCACTTGGAGGATGGAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp GAGAGAGAGAGGAGGTCACCAACTGAGGGGCAGACCCCGCACAGCGTGTACCCCATGGTGTGGAAGTGCTaGGCACAGGCCCCACAACTG +
Preference number: 5 (lower is better)
Translates to: ERERRSPTEGQTPHSVYPMVWKC*AQAPQL
Trigger: CAGTTGTGGGGCCTGTGCCAAGCACTTCCACACCAT...GGGGTACACGCTGTGCGGGGTCTGCCCCTCAGTTGGTGACCTCCTCTCTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCATGGGGCTCAGAGCCTTaGCAGCGAGGGTGGTTCCGC +
Preference number: 5 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSWGSEP*QRGWFR
Trigger: GCGGAACCACCCTCGCTGCAAAGGCTCTGAGCCCCA...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS TCA 90 bp GGCGAGCAGCCTTGCAATGTACCCGCACGTGGTTGCGCAGGGCCATaGGATTGGGGTACTTGCGGGGACAGAGTGAGCACTGGTACTCTC +
Preference number: 5 (lower is better)
Translates to: GEQPCNVPARGCAGP*DWGTCGDRVSTGTL
Trigger: GAGAGTACCAGTGCTCACTCTGTCCCCGCAAGTACCCCAATCTCATGGCCCTGCGCAACCACGTGCGGGTACATTGCAAGGCTGCTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CGAGGGATGCTGTCAGCCTCCTCACTGTCCTGGTTGGGAGATGGATaGAGCAGTTCTCGGTGCCGAGAGAGCTCTGGGAGGCTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: RGMLSASSLSWLGDG*SSSRCRESSGRLGK
Trigger: CTTTCCCAGCCTCCCAGAGCTCTCTCGGCACCGAGAACTGCTCCATCCATCTCCCAACCAGGACAGTGAGGAGGCTGACAGCATCCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
ENST00000564189.1
CDS CCA 90 bp CACCATCCTCAGGACCTGGGTGGCTTGCCAAGCCTTCTCTTTGTCTaGTGGGCAGATCTTCCCACGTACCCGAAGCTGCCCTGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: HHPQDLGGLPSLLFV*WADLPTYPKLPWGQ
Trigger: CTGACCCCAGGGCAGCTTCGGGTACGTGGGAAGATCTGCCCACCAGACAAAGAGAAGGCTTGGCAAGCCACCCAGGTCCTGAGGATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CCA 90 bp GTGCTGAGCTCCGCAGAGCCATTCAGCATCTGTGCACTGGGGAGCTaGTCCTGGCTGCTCTCATCTGTGTGCCCATTGGTGGTGGGCATC +
Preference number: 5 (lower is better)
Translates to: VLSSAEPFSICALGS*SWLLSSVCPLVVGI
Trigger: GATGCCCACCACCAATGGGCACACAGATGAGAGCAGCCAGGACCAGCTCCCCAGTGCACAGATGCTGAATGGCTCTGCGGAGCTCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp GACCACACTCACTGCACTTATAGGGCCGATGGTCCAGGGTGGTGGTaGGGTCCTCTTCCTCTTTGTGGGTGGTCTCAGCCAGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: DHTHCTYRADGPGWW*GPLPLCGWSQPAAG
Trigger: CCCTGCTGCTGGCTGAGACCACCCACAAAGAGGAAGAGGACCCCACCACCACCCTGGACCATCGGCCCTATAAGTGCAGTGAGTGTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CCGATGTCTGCACTTCGGCGAGCAGCCTTGCAATGTACCCGCACGTaGTTGCGCAGGGCCATGAGATTGGGGTACTTGCGGGGACAGAGT +
Preference number: 5 (lower is better)
Translates to: PMSALRRAALQCTRT*LRRAMRLGYLRGQS
Trigger: ACTCTGTCCCCGCAAGTACCCCAATCTCATGGCCCTGCGCAACCACGTGCGGGTACATTGCAAGGCTGCTCGCCGAAGTGCAGACATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CGCCGACTGTGCCGGCGCAAGTGGTTCTTCATGGCAGCCATGGTGTaGAAGTGCTTGGCACAGGCCCCACAACTGAAGTCTCCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: RRLCRRKWFFMAAMV*KCLAQAPQLKSPVW
Trigger: CCAGACAGGAGACTTCAGTTGTGGGGCCTGTGCCAAGCACTTCCACACCATGGCTGCCATGAAGAACCACTTGCGCCGGCACAGTCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CACTCGCTGCAGCGGAAACGTCGGGGATCTGCATGGATGCGCCGGTaGTTCTTGAGGGACATGAGGTTTGAGAAGCCCTTGGAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: HSLQRKRRGSAWMRR*FLRDMRFEKPLEQA
Trigger: GGCCTGCTCCAAGGGCTTCTCAAACCTCATGTCCCTCAAGAACCACCGGCGCATCCATGCAGATCCCCGACGTTTCCGCTGCAGCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp GGGGAGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTATGGTGTGGAAGTGCTaGGCACAGGCCCCACAACTG +
Preference number: 5 (lower is better)
Translates to: GEGGRDQSREDEDNSTLLMVWKC*AQAPQL
Trigger: CAGTTGTGGGGCCTGTGCCAAGCACTTCCACACCAT...AAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTGACTCCAGGCCTTCATaGTCTTCTAGCTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: RWNGSASTRGGGEASPGPDSRPS*SSSSRV
Trigger: GACCCGGGAGCTAGAAGACAATGAAGGCCTGGAGTC...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCAGGTGCCTGCTCCCTCTaGAGACTTGGCATCTCCACC +
Preference number: 5 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPGACSL*RLGIST
Trigger: GGTGGAGATGCCAAGTCTCAAGAGGGAGCAGGCACC...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCCATGTGCTGGGGCTaGTTGCTGCCTCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSAMCWG*LLPPSG
Trigger: CCCAGAAGGAGGCAGCAACAAGCCCCAGCACATGGC...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCTTCTCGACTTCTGCTaGCCCCGGCCCCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPLLDFC*PRPLLC
Trigger: GCAGAGGAGGGGCCGGGGCAAGCAGAAGTCGAGAAG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp ACGCCCCCACGTGCTGCCCAACCCACCCTGCTATTTGTTATACCTGACTTGCGGTGCGCTCCCCTGGCCTaGGGACTCCATCCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: TPPRAAQPTLLFVIPDLRCAPLA*GLHPPS
Trigger: ACTTGGAGGATGGAGTCCCAAGGCCAGGGGAGCGCA...CCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTCCCACTCCAGCTGCCTaGGGTAGGGTGGAGCAACAG +
Preference number: 5 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLPTPAA*GRVEQQ
Trigger: CTGTTGCTCCACCCTACCCAAGGCAGCTGGAGTGGG...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS TCA 90 bp GTGGTTGCGCAGGGCCATGAGATTGGGGTACTTGCGGGGACAGAGTaGGCACTGGTACTCTCCAGTCCGATGGCTGTGGCGATGGTTCAC +
Preference number: 5 (lower is better)
Translates to: VVAQGHEIGVLAGTE*ALVLSSPMAVAMVH
Trigger: GTGAACCATCGCCACAGCCATCGGACTGGAGAGTACCAGTGCTCACTCTGTCCCCGCAAGTACCCCAATCTCATGGCCCTGCGCAACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS TCA 90 bp GGGATCTGCATGGATGCGCCGGTGGTTCTTGAGGGACATGAGGTTTaGGAAGCCCTTGGAGCAGGCCTGACAGCCAAAGTGGCCGGTCTG +
Preference number: 5 (lower is better)
Translates to: GICMDAPVVLEGHEV*EALGAGLTAKVAGL
Trigger: CAGACCGGCCACTTTGGCTGTCAGGCCTGCTCCAAGGGCTTCTCAAACCTCATGTCCCTCAAGAACCACCGGCGCATCCATGCAGATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp CTGTGCCGGCGCAAGTGGTTCTTCATGGCAGCCATGGTGTGGAAGTaGTTGGCACAGGCCCCACAACTGAAGTCTCCTGTCTGGTGGGTC +
Preference number: 5 (lower is better)
Translates to: LCRRKWFFMAAMVWK*LAQAPQLKSPVWWV
Trigger: GACCCACCAGACAGGAGACTTCAGTTGTGGGGCCTGTGCCAAGCACTTCCACACCATGGCTGCCATGAAGAACCACTTGCGCCGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp CTCCATGGCATCACCTGCCACTCCCAAGGGGCTGGGAGCCTTGTCTaGAGTAGTCCCAGAACTCTGACTTTGGTGGTGACGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LHGITCHSQGAGSLV*SSPRTLTLVVTLQA
Trigger: AGCCTGGAGCGTCACCACCAAAGTCAGAGTTCTGGGACTACTGCAGACAAGGCTCCCAGCCCCTTGGGAGTGGCAGGTGATGCCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp ACTTTCCCCACCCTGGATGCAGAGGCTGTCTCCCAAGGGGGTGCCTaGTCCCTCTTGAGACTTGGCATCTCCACCCTCTCCAGAGACAGA +
Preference number: 5 (lower is better)
Translates to: TFPTLDAEAVSQGGA*SLLRLGISTLSRDR
Trigger: TCTGTCTCTGGAGAGGGTGGAGATGCCAAGTCTCAAGAGGGAGCAGGCACCCCCTTGGGAGACAGCCTCTGCATCCAGGGTGGGGAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CATCCTCAGGACCTGGGTGGCTTGCCAAGCCTTCTCTTTGTCTGGTaGGCAGATCTTCCCACGTACCCGAAGCTGCCCTGGGGTCAGGTA +
Preference number: 5 (lower is better)
Translates to: HPQDLGGLPSLLFVW*ADLPTYPKLPWGQV
Trigger: TACCTGACCCCAGGGCAGCTTCGGGTACGTGGGAAGATCTGCCCACCAGACAAAGAGAAGGCTTGGCAAGCCACCCAGGTCCTGAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CCA 90 bp AGCTCCGCAGAGCCATTCAGCATCTGTGCACTGGGGAGCTGGTCCTaGCTGCTCTCATCTGTGTGCCCATTGGTGGTGGGCATCCCTTTC +
Preference number: 5 (lower is better)
Translates to: SSAEPFSICALGSWS*LLSSVCPLVVGIPF
Trigger: GAAAGGGATGCCCACCACCAATGGGCACACAGATGAGAGCAGCCAGGACCAGCTCCCCAGTGCACAGATGCTGAATGGCTCTGCGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CACGACCACACTCACTGCACTTATAGGGCCGATGGTCCAGGGTGGTaGTGGGGTCCTCTTCCTCTTTGTGGGTGGTCTCAGCCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: HDHTHCTYRADGPGW*WGPLPLCGWSQPAA
Trigger: TGCTGCTGGCTGAGACCACCCACAAAGAGGAAGAGGACCCCACCACCACCCTGGACCATCGGCCCTATAAGTGCAGTGAGTGTGGTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp TCTCGGCAGTCTCCAGCCTGGGCTCTATCTCCTCCCCCTTCACAGTaGTCTCCTCCCACACCTCTTCTTTCACCCTGGCCACTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SRQSPAWALSPPPSQ*SPPTPLLSPWPLPP
Trigger: TGGAGGAAGTGGCCAGGGTGAAAGAAGAGGTGTGGGAGGAGACCACTGTGAAGGGGGAGGAGATAGAGCCCAGGCTGGAGACTGCCGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp AAGGCCTTCCCACACTCGCTGCAGCGGAAACGTCGGGGATCTGCATaGATGCGCCGGTGGTTCTTGAGGGACATGAGGTTTGAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: KAFPHSLQRKRRGSA*MRRWFLRDMRFEKP
Trigger: GGGCTTCTCAAACCTCATGTCCCTCAAGAACCACCGGCGCATCCATGCAGATCCCCGACGTTTCCGCTGCAGCGAGTGTGGGAAGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGGCCCGCACATGGTTTTaGAGGGCAGCCGCATTGAAC +
Preference number: 5 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRARTWF*RAAALN
Trigger: GTTCAATGCGGCTGCCCTCAAAAACCATGTGCGGGC...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGGGTCCTCTTCCTCTTaGTGGGTGGTCTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSGSSSS*WVVSAS
Trigger: GCTGGCTGAGACCACCCACAAAGAGGAAGAGGACCC...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGTGTACCCGCACGTGGTaGCGCAGGGCCATGAGATTG +
Preference number: 5 (lower is better)
Translates to: EEPEPEAEPGSCLANISMCTRTW*RRAMRL
Trigger: CAATCTCATGGCCCTGCGCAACCACGTGCGGGTACA...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CAA 90 bp GCAGAGACAAGGCGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAATGTACCCGCACGTGGTaGCGCAGGGCCATGAGATTG +
Preference number: 5 (lower is better)
Translates to: AETRRRERGTGSRVPTSECTRTW*RRAMRL
Trigger: CAATCTCATGGCCCTGCGCAACCACGTGCGGGTACA...TTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCGCCTTGTCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp GCGGCTTCCAGCAGTGCTGGGTGGAGGCGATTCCCCACGGAGATGCCCTCTGATCTCTCAAGCCCACATTaGTCCCCTTCAGATTCAGCC +
Preference number: 5 (lower is better)
Translates to: AASSSAGWRRFPTEMPSDLSSPH*SPSDSA
Trigger: GGCTGAATCTGAAGGGGACAAATGTGGGCTTGAGAG...ATCAGAGGGCATCTCCGTGGGGAATCGCCTCCACCCAGCACTGCTGGAAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGGAAGAGGAGTTGGGTaGGCCAGTGGCTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQGRGVG*ASGWLL
Trigger: CAGAAGCCAGCCACTGGCCAACCCAACTCCTCTTCC...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGAAGGGGCTGGGAGCCTaGTCTGCAGTAGTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRKGLGA*SAVVPE
Trigger: TTCTGGGACTACTGCAGACAAGGCTCCCAGCCCCTT...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCGCCATGTGCTGGGGCTaGTTGCTGCCTCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: SVDTPTPNSATKQASQLSAMCWG*LLPPSG
Trigger: CCCAGAAGGAGGCAGCAACAAGCCCCAGCACATGGC...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CTTTCAGGTGACTCCCACCTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACTCAGAGTAGGTCCATaGAGCTGGCAGTCACCAGCG +
Preference number: 5 (lower is better)
Translates to: LSGDSHLPSALTRPVKGPLRVGP*SWQSPA
Trigger: CGCTGGTGACTGCCAGCTCAATGGACCTACTCTGAG...TGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAGGTGGGAGTCACCTGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTCTCCTGGGCTTTCCCTaGACCAGGGAGAACCACCTG +
Preference number: 5 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLLLGFP*TRENHL
Trigger: CAGGTGGTTCTCCCTGGTCAAGGGAAAGCCCAGGAG...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp GCAGAGACAAGGCGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACTCCTGGGCTTTCCCTaGACCAGGGAGAACCACCTG +
Preference number: 5 (lower is better)
Translates to: AETRRRERGTGSRVPTSELLGFP*TRENHL
Trigger: CAGGTGGTTCTCCCTGGTCAAGGGAAAGCCCAGGAG...TTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCGCCTTGTCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCAGGTTAGGGAGAAGTTaGGGACAGAGGGAGCACGGG +
Preference number: 5 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILRLGRS*GQREHG
Trigger: CCCGTGCTCCCTCTGTCCCAAACTTCTCCCTAACCT...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CTGCCCTCTGCTCTGACAAGGCCTGTCAAGGGCCCACCATCTCAGGGCCACCCAGGCTGCTCAACCGCTTaGAGCCTCAGTATTCTCATC +
Preference number: 5 (lower is better)
Translates to: LPSALTRPVKGPPSQGHPGCSTA*SLSILI
Trigger: GATGAGAATACTGAGGCTCAAAGCGGTTGAGCAGCC...TGGGTGGCCCTGAGATGGTGGGCCCTTGACAGGCCTTGTCAGAGCAGAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS TCA 90 bp TGTGCCTGCGGCGGCCCTCAGGAGCATGTGTCCTCATATGGCTCTTaGGAGCCATGGGATTGGAGAAGTCCTTGCCACAGGTGGTACAGG +
Preference number: 5 (lower is better)
Translates to: CACGGPQEHVSSYGS*EPWDWRSPCHRWYR
Trigger: CCTGTACCACCTGTGGCAAGGACTTCTCCAATCCCATGGCTCTCAAGAGCCATATGAGGACACATGCTCCTGAGGGCCGCCGCAGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS TCA 90 bp TGGTTCTTGAGGGACATGAGGTTTGAGAAGCCCTTGGAGCAGGCCTaGCAGCCAAAGTGGCCGGTCTGGTGGCTCTGCCGGTGGTTGATG +
Preference number: 5 (lower is better)
Translates to: WFLRDMRFEKPLEQA*QPKWPVWWLCRWLM
Trigger: CATCAACCACCGGCAGAGCCACCAGACCGGCCACTTTGGCTGTCAGGCCTGCTCCAAGGGCTTCTCAAACCTCATGTCCCTCAAGAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp ACAAACTTTCCCCACCCTGGATGCAGAGGCTGTCTCCCAAGGGGGTaGCTGCTCCCTCTTGAGACTTGGCATCTCCACCCTCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: TNFPHPGCRGCLPRG*LLPLETWHLHPLQR
Trigger: TCTCTGGAGAGGGTGGAGATGCCAAGTCTCAAGAGGGAGCAGGCACCCCCTTGGGAGACAGCCTCTGCATCCAGGGTGGGGAAAGTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp AGAGTTAGTGGAGGGTCCCCAGCCGTCTGCACCATCCTCAGGACCTaGGTGGCTTGCCAAGCCTTCTCTTTGTCTGGTGGGCAGATCTTC +
Preference number: 5 (lower is better)
Translates to: RVSGGSPAVCTILRT*VACQAFSLSGGQIF
Trigger: GAAGATCTGCCCACCAGACAAAGAGAAGGCTTGGCAAGCCACCCAGGTCCTGAGGATGGTGCAGACGGCTGGGGACCCTCCACTAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CCA 90 bp AAGCACGACCACACTCACTGCACTTATAGGGCCGATGGTCCAGGGTaGTGGTGGGGTCCTCTTCCTCTTTGTGGGTGGTCTCAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: KHDHTHCTYRADGPG*WWGPLPLCGWSQPA
Trigger: TGCTGGCTGAGACCACCCACAAAGAGGAAGAGGACCCCACCACCACCCTGGACCATCGGCCCTATAAGTGCAGTGAGTGTGGTCGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGGATTGGAGAAGTCCTaGCCACAGGTGGTACAGGGG +
Preference number: 5 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQGLEKS*PQVVQG
Trigger: CCCCTGTACCACCTGTGGCAAGGACTTCTCCAATCC...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAATTGAGGGCAGCCGCATaGAACAGCTGCTTAGAACAG +
Preference number: 5 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLELRAAA*NSCLEQ
Trigger: CTGTTCTAAGCAGCTGTTCAATGCGGCTGCCCTCAA...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CAA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTTGGGTCTGCCTGTGGTaGATAAGGCTGCCTGAGTGG +
Preference number: 5 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLWVCLW*IRLPEW
Trigger: CCACTCAGGCAGCCTTATCAACCACAGGCAGACCCA...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp GCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGTGGGTCTGCCTGTGGTaGATAAGGCTGCCTGAGTGG +
Preference number: 5 (lower is better)
Translates to: AGKEGQGVGCQPVNQFPWWVCLW*IRLPEW
Trigger: CCACTCAGGCAGCCTTATCAACCACAGGCAGACCCA...CCACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCACCCAGAACTCTGACTTaGGTGGTGACGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSPRTLT*VVTLQA
Trigger: AGCCTGGAGCGTCACCACCAAAGTCAGAGTTCTGGG...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CGCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGAAGGGGCTGGGAGCCTaGTCTGCAGTAGTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: RRERGTGSRVPTSEPVSVKGLGA*SAVVPE
Trigger: TTCTGGGACTACTGCAGACAAGGCTCCCAGCCCCTT...CACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGTCTTGCCACACTGGTaGCAGCGGAAGGGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: LSILICHGGQDRPCSFEEVLPHW*QRKGRG
Trigger: GCCCCGCCCCTTCCGCTGCAACCAGTGTGGCAAGAC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp TATGTCCTCCAAGACACTGTCCACGACCATCTCCATGGCATCACCTaGCACTCCCAAGGGGCTGGGAGCCTTGTCTGCAGTAGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: YVLQDTVHDHLHGIT*HSQGAGSLVCSSPR
Trigger: TCTGGGACTACTGCAGACAAGGCTCCCAGCCCCTTGGGAGTGGCAGGTGATGCCATGGAGATGGTCGTGGACAGTGTCTTGGAGGACATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGGTCCTCATATGGCTCTaGAGAGCCATGGGATTGGAG +
Preference number: 5 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRVLIWL*RAMGLE
Trigger: CTCCAATCCCATGGCTCTCAAGAGCCATATGAGGAC...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCACTAGAGCCAAGCCTTaGGCCCCAGGAGTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: SVDTPTPNSATKQASQLSTRAKP*APGVSG
Trigger: TCCACTGACTCCTGGGGCCAAAGGCTTGGCTCTAGT...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp GCAGGGAAAGAGGGACAGGGAGTAGGGTGCCAACCAGTGAACCAGTTTCCGTGGTGGCTCTTTCGATGGTaGATGAGGCTCCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: AGKEGQGVGCQPVNQFPWWLFRW*MRLPAW
Trigger: CCATGCTGGGAGCCTCATCAACCATCGAAAGAGCCA...CCACGGAAACTGGTTCACTGGTTGGCACCCTACTCCCTGTCCCTCTTTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp GCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGTTGAGGGCAGCCGCATaGAACAGCTGCTTAGAACAG +
Preference number: 5 (lower is better)
Translates to: AGQGCLWTLPHPTLLPSRLRAAA*NSCLEQ
Trigger: CTGTTCTAAGCAGCTGTTCAATGCGGCTGCCCTCAA...CCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGCTCAGAGCCTTaGCAGCGAGGGTGGTTCCGC +
Preference number: 5 (lower is better)
Translates to: LSILICHGGQDRPCSFEEWGSEP*QRGWFR
Trigger: GCGGAACCACCCTCGCTGCAAAGGCTCTGAGCCCCA...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp AGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAATGCGCCGGTGGTTCTaGAGGGACATGAGGTTTGAG +
Preference number: 5 (lower is better)
Translates to: RGVCGHSHTQLCYQAGVSMRRWF*RDMRFE
Trigger: CTCAAACCTCATGTCCCTCAAGAACCACCGGCGCAT...TGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGATGCGCCGGTGGTTCTaGAGGGACATGAGGTTTGAG +
Preference number: 5 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQMRRWF*RDMRFE
Trigger: CTCAAACCTCATGTCCCTCAAGAACCACCGGCGCAT...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp AGATGGAATGGGTCCGCCTCTACTAGGGGAGGTGGAGAGGCCAGCCCAGGTCCTAACCCACCCTGCTATTaGTTATACCTGACTTGCGGG +
Preference number: 5 (lower is better)
Translates to: RWNGSASTRGGGEASPGPNPPCY*LYLTCG
Trigger: CCCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTT...AGGACCTGGGCTGGCCTCTCCACCTCCCCTAGTAGAGGCGGACCCATTCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp TTCCTTCCCCACAGGCCAACCAACCAGCTGCTGACAGGGGACCTGGCCATTCTCATCCTAAAAAGGCCGTaGGCAGCAGAGGGAAAAGGG +
Preference number: 5 (lower is better)
Translates to: FLPHRPTNQLLTGDLAILILKRP*AAEGKG
Trigger: CCCTTTTCCCTCTGCTGCCAACGGCCTTTTTAGGAT...GAGAATGGCCAGGTCCCCTGTCAGCAGCTGGTTGGTTGGCCTGTGGGGAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS TCA 90 bp AGGAGGGGACTGGGTGGGCTCCTGGCCCCCTGTGAAGTTCACTACTaGTTCAGCCAGATACTGTTCCAAGTTGCTAAGAAGGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: RRGLGGLLAPCEVHY*FSQILFQVAKKAAG
Trigger: GCCAGCAGCCTTCTTAGCAACTTGGAACAGTATCTGGCTGAATCAGTAGTGAACTTCACAGGGGGCCAGGAGCCCACCCAGTCCCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS-3UTR CAA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCATCTGTGTGCCCATaGGTGGTGGGCATCCCTTTC +
Preference number: 5 (lower is better)
Translates to: SVDTPTPNSATKQASQLSSSVCP*VVGIPF
Trigger: GAAAGGGATGCCCACCACCAATGGGCACACAGATGA...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp ACGCCCCCACGTGCTGCCCAACCCACCCTGCTATTTGTTATACCTGACTTGCGGATATGTGCTGCTGTCTaGTCTGCTGCTGGGGTGATG +
Preference number: 5 (lower is better)
Translates to: TPPRAAQPTLLFVIPDLRICAAV*SAAGVM
Trigger: CATCACCCCAGCAGCAGACAAGACAGCAGCACATAT...CCGCAAGTCAGGTATAACAAATAGCAGGGTGGGTTGGGCAGCACGTGGGGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCTTCTCGACTTCTGCTaGCCCCGGCCCCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLLLDFC*PRPLLC
Trigger: GCAGAGGAGGGGCCGGGGCAAGCAGAAGTCGAGAAG...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGCGCTCCCCTGGCCTaGGGACTCCATCCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: LSILICHGGQDRPCSFEECAPLA*GLHPPS
Trigger: ACTTGGAGGATGGAGTCCCAAGGCCAGGGGAGCGCA...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TGCAGGACAGGGGTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGGCTGCTCAACCGCTTaGAGCCTCAGTATTCTCATC +
Preference number: 5 (lower is better)
Translates to: CRTGVSVDTPTPNSATKQGCSTA*SLSILI
Trigger: GATGAGAATACTGAGGCTCAAAGCGGTTGAGCAGCC...CTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGACACCCCTGTCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 90 bp GCCTTCTCTTTGTCTGGTGGGCAGATCTTCCCACGTACCCGAAGCTaGCCTGGGGTCAGGTACAGATTCACAGTCAGGTGTCTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: AFSLSGGQIFPRTRS*PGVRYRFTVRCLFC
Trigger: ACAGAAGAGACACCTGACTGTGAATCTGTACCTGACCCCAGGGCAGCTTCGGGTACGTGGGAAGATCTGCCCACCAGACAAAGAGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS GCA 90 bp GCTCTCAGCGTCTTCAAAGAGCAGCCCACAGATGCTACAGATATGTaGTGCTGTCTTGTCTGCTGCTGGGGTGATGTCCGTGGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: ALSVFKEQPTDATDM*CCLVCCWGDVRGLF
Trigger: GAAGAGGCCACGGACATCACCCCAGCAGCAGACAAGACAGCAGCACATATCTGTAGCATCTGTGGGCTGCTCTTTGAAGACGCTGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATCGCAGGGCCATGAGATaGGGGTACTTGCGGGGACAG +
Preference number: 5 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNRRAMR*GYLRGQ
Trigger: CTGTCCCCGCAAGTACCCCAATCTCATGGCCCTGCG...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATCTTCGGCGAGCAGCCTaGCAATGTACCCGCACGTGG +
Preference number: 5 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNLRRAA*QCTRTW
Trigger: CCACGTGCGGGTACATTGCAAGGCTGCTCGCCGAAG...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGGGCGGGAGTTCTACCTaGAGGTGGCTGGGGGCACCC +
Preference number: 5 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEGGSST*RWLGAP
Trigger: GGGTGCCCCCAGCCACCTCAAGGTAGAACTCCCGCC...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGGAAGAGGAGTTGGGTaGGCCAGTGGCTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LSLSILICHGGQDRPCSFGRGVG*ASGWLL
Trigger: CAGAAGCCAGCCACTGGCCAACCCAACTCCTCTTCC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAAGGTGCCTGCTCCCTCTaGAGACTTGGCATCTCCACC +
Preference number: 5 (lower is better)
Translates to: LSILICHGGQDRPCSFEEGACSL*RLGIST
Trigger: GGTGGAGATGCCAAGTCTCAAGAGGGAGCAGGCACC...TTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCGTCTTGCCACACTGGTaGCAGCGGAAGGGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSVLPHW*QRKGRG
Trigger: GCCCCGCCCCTTCCGCTGCAACCAGTGTGGCAAGAC...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGCTCAGAGTAGGTCCATaGAGCTGGCAGTCACCAGCG +
Preference number: 5 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGLRVGP*SWQSPA
Trigger: CGCTGGTGACTGCCAGCTCAATGGACCTACTCTGAG...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TGGACTGGCAGGTCTACTTCGCCGAGGAACCAGAGCCCGAGGCTGAGCCTGGAATCTCTTCTGTATGTTTaGTCTGGTTTTCCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: WTGRSTSPRNQSPRLSLESLLYV*SGFPSL
Trigger: AAGGCTGGGAAAACCAGACAAAACATACAGAAGAGA...TTCCAGGCTCAGCCTCGGGCTCTGGTTCCTCGGCGAAGTAGACCTGCCAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CAA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGCCCGCACATGGTTTTaGAGGGCAGCCGCATTGAAC +
Preference number: 5 (lower is better)
Translates to: LSLSILICHGGQDRPCSFARTWF*RAAALN
Trigger: GTTCAATGCGGCTGCCCTCAAAAACCATGTGCGGGC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATGGGGATGAGATTGGGGTACTaGCGGGGACAGAGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: YSHLSWRPRQTLFLRGMGMRLGY*RGQSEH
Trigger: GTGCTCACTCTGTCCCCGCAAGTACCCCAATCTCAT...CCCCATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTCCTGGGATGTCCAAGTaGTCAAGTAAACTGGCATCC +
Preference number: 5 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPPGMSK*SSKLAS
Trigger: GGATGCCAGTTTACTTGACAACTTGGACATCCCAGG...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCCCTGGGATGTCCAAGTaGTCAAGTAAACTGGCATCC +
Preference number: 5 (lower is better)
Translates to: SVDTPTPNSATKQASQLSPGMSK*SSKLAS
Trigger: GGATGCCAGTTTACTTGACAACTTGGACATCCCAGG...GGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 90 bp CTCTTTGTCTGGTGGGCAGATCTTCCCACGTACCCGAAGCTGCCCTaGGGTCAGGTACAGATTCACAGTCAGGTGTCTCTTCTGTATGTT +
Preference number: 5 (lower is better)
Translates to: LFVWWADLPTYPKLP*GQVQIHSQVSLLYV
Trigger: AACATACAGAAGAGACACCTGACTGTGAATCTGTACCTGACCCCAGGGCAGCTTCGGGTACGTGGGAAGATCTGCCCACCAGACAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS-3UTR CAA 90 bp TGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCAGCTTTCCTCCTAGATACTGTTCCAAGTaGCTAAGAAGGCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: WTLPHPTLLPSRRLSFPPRYCSK*LRRLLA
Trigger: AGCCAGCAGCCTTCTTAGCAACTTGGAACAGTATCT...AGGAGGAAAGCTGAGACGCCTGCTTGGTAGCAGAGTTGGGTGTGGGAGTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATAGGTTAGAGAACTCCTaGAAACAGATGGCACAGGGG +
Preference number: 5 (lower is better)
Translates to: LTCGCSAQHILKLLLSPHRLENS*KQMAQG
Trigger: CCCCTGTGCCATCTGTTTCAAGGAGTTCTCTAACCT...ATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp GAGGAACCAGAGCCCGAGGCTGAGCCTGGAAGCTGCCTGGCCAACATAAGTATGTCAGATTCTGGTTCTTaGTCATCGTGTGACTTGGAG +
Preference number: 5 (lower is better)
Translates to: EEPEPEAEPGSCLANISMSDSGS*SSCDLE
Trigger: CTCCAAGTCACACGATGACAAAGAACCAGAATCTGA...CATACTTATGTTGGCCAGGCAGCTTCCAGGCTCAGCCTCGGGCTCTGGTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS-3UTR CAA 90 bp AGGGAGGGAGGGACCAAAGCCGTGAGGATGAGGACAACTCCACCCTCCTTCCTTTCAGATTCTGGTTCTTaGTCATCGTGTGACTTGGAG +
Preference number: 5 (lower is better)
Translates to: REGGTKAVRMRTTPPSFLSDSGS*SSCDLE
Trigger: CTCCAAGTCACACGATGACAAAGAACCAGAATCTGA...AAGGAAGGAGGGTGGAGTTGTCCTCATCCTCACGGCTTTGGTCCCTCCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGTCCTCATATGGCTCTaGAGAGCCATGGGATTGGAG +
Preference number: 5 (lower is better)
Translates to: LSLSILICHGGQDRPCSFVLIWL*RAMGLE
Trigger: CTCCAATCCCATGGCTCTCAAGAGCCATATGAGGAC...GAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TTTGAGCCTCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTTGGCTCTTTCGATGGTaGATGAGGCTCCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: FEPQYSHLSWRPRQTLFLWLFRW*MRLPAW
Trigger: CCATGCTGGGAGCCTCATCAACCATCGAAAGAGCCA...AAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGAGGCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGGGGTCCTCTTCCTCTTaGTGGGTGGTCTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRGSSSS*WVVSAS
Trigger: GCTGGCTGAGACCACCCACAAAGAGGAAGAGGACCC...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CTGACTTGCGGGTGCTCAGCTCAGCACATCCTCAAGCTACTTCTCTCACCCCATGAAAGGGTGGTTTGGTaGGATCCTAAAAAGGCCGTT +
Preference number: 5 (lower is better)
Translates to: LTCGCSAQHILKLLLSPHERVVW*DPKKAV
Trigger: AACGGCCTTTTTAGGATCCAACCAAACCACCCTTTC...ATGGGGTGAGAGAAGTAGCTTGAGGATGTGCTGAGCTGAGCACCCGCAAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS TCA 90 bp ATGGTTTTTGAGGGCAGCCGCATTGAACAGCTGCTTAGAACAGAGTaGGCAGGGGTAGACACCTGTCTGGTGGCTCTTTCGATGGTTGAT +
Preference number: 5 (lower is better)
Translates to: MVFEGSRIEQLLRTE*AGVDTCLVALSMVD
Trigger: ATCAACCATCGAAAGAGCCACCAGACAGGTGTCTACCCCTGCTCACTCTGTTCTAAGCAGCTGTTCAATGCGGCTGCCCTCAAAAACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS TCA 90 bp CACAGATGCTACAGATATGTGCTGCTGTCTTGTCTGCTGCTGGGGTaGTGTCCGTGGCCTCTTCTTCATGTTTGCACACATGGTCCTGAT +
Preference number: 5 (lower is better)
Translates to: HRCYRYVLLSCLLLG*CPWPLLHVCTHGPD
Trigger: ATCAGGACCATGTGTGCAAACATGAAGAAGAGGCCACGGACATCACCCCAGCAGCAGACAAGACAGCAGCACATATCTGTAGCATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGGGATTGGAGAAGTCCTaGCCACAGGTGGTACAGGGG +
Preference number: 5 (lower is better)
Translates to: QADPFDSDSGSLSSCDLEGLEKS*PQVVQG
Trigger: CCCCTGTACCACCTGTGGCAAGGACTTCTCCAATCC...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CTCCTCCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTCGCAGGGCCATGAGATaGGGGTACTTGCGGGGACAG +
Preference number: 5 (lower is better)
Translates to: LLLYPFRYNHASHVVLKIRRAMR*GYLRGQ
Trigger: CTGTCCCCGCAAGTACCCCAATCTCATGGCCCTGCG...AATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGGACTCCAGGCCTTCATaGTCTTCTAGCTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRDSRPS*SSSSRV
Trigger: GACCCGGGAGCTAGAAGACAATGAAGGCCTGGAGTC...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATCTCTCAAGCCCACATTaGTCCCCTTCAGATTCAGCC +
Preference number: 5 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNLSSPH*SPSDSA
Trigger: GGCTGAATCTGAAGGGGACAAATGTGGGCTTGAGAG...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCCCCAGAACTCTGACTTaGGTGGTGACGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSPRTLT*VVTLQA
Trigger: AGCCTGGAGCGTCACCACCAAAGTCAGAGTTCTGGG...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CAGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGAGGTTAGGGAGAAGTTaGGGACAGAGGGAGCACGGG +
Preference number: 5 (lower is better)
Translates to: QADPFDSDSGSLSSCDLERLGRS*GQREHG
Trigger: CCCGTGCTCCCTCTGTCCCAAACTTCTCCCTAACCT...CTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGTCATCTGTGTGCCCATaGGTGGTGGGCATCCCTTTC +
Preference number: 5 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRSSVCP*VVGIPF
Trigger: GAAAGGGATGCCCACCACCAATGGGCACACAGATGA...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp CAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCAGGATGAGATTGGGGTACTaGCGGGGACAGAGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: QTHLIQILVLCHRVTWSRMRLGY*RGQSEH
Trigger: GTGCTCACTCTGTCCCCGCAAGTACCCCAATCTCAT...CCTGCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp AGGCAGACCCATTTGATTCAGATTCTGGTTCTTTGTCATCGTGTGACTTGGAGCATATGTGCTGCTGTCTaGTCTGCTGCTGGGGTGATG +
Preference number: 5 (lower is better)
Translates to: RQTHLIQILVLCHRVTWSICAAV*SAAGVM
Trigger: CATCACCCCAGCAGCAGACAAGACAGCAGCACATAT...GCTCCAAGTCACACGATGACAAAGAACCAGAATCTGAATCAAATGGGTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp TCAGTATTCTCATCTGTCATGGCGGCCAAGACAGACCCTGTTCCTTCGAGGAATTCTCTTCTGTATGTTTaGTCTGGTTTTCCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: SVFSSVMAAKTDPVPSRNSLLYV*SGFPSL
Trigger: AAGGCTGGGAAAACCAGACAAAACATACAGAAGAGA...ATTCCTCGAAGGAACAGGGTCTGTCTTGGCCGCCATGACAGATGAGAATACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS-3UTR CAA 90 bp AGACCAAACCAATGGCTTCCTCTTTTTCTCTGGAAGTCATTACTTTACTGGCTGTTTGTTATACCTGACTaGCGGGTGCTCAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: RPNQWLPLFLWKSLLYWLFVIPD*RVLSSA
Trigger: TGCTGAGCTGAGCACCCGCAAGTCAGGTATAACAAA...CAGCCAGTAAAGTAATGACTTCCAGAGAAAAAGAGGAAGCCATTGGTTTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS-3UTR CAA 90 bp CCTTTACCCTTTCAGATACAATCACGCCAGCCACGTTGTTTTGAAAATTTCTTTAGGTTAGAGAACTCCTaGAAACAGATGGCACAGGGG +
Preference number: 5 (lower is better)
Translates to: PLPFQIQSRQPRCFENFFRLENS*KQMAQG
Trigger: CCCCTGTGCCATCTGTTTCAAGGAGTTCTCTAACCT...AAAGAAATTTTCAAAACAACGTGGCTGGCGTGATTGTATCTGAAAGGGTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS TCA 90 bp GGTATAGCTAAGGAAATTAAAGTTGAGAGAGATGCAACCTACTTCTaGTCACAGACCTGTTATGTTCTTCAGACCAGACTCAAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: GIAKEIKVERDATYF*SQTCYVLQTRLKRH
Trigger: ATGCCTTTTGAGTCTGGTCTGAAGAACATAACAGGTCTGTGATCAGAAGTAGGTTGCATCTCTCTCAACTTTAATTTCCTTAGCTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394979.2
CDS CCA 72 bp GTGCCCCCACCCCCACGCCGTTCCATGTGGACCCGCTaGTGGCTGGCCAGCTGTTTCCGCAGGCGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: VPPPPRRSMWTR*WLASCFRRRKA
Trigger: GGCCTTCCGCCTGCGGAAACAGCTGGCCAGCCACCAGCGGGTCCACATGGAACGGCGTGGGGGTGGGGGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp GGAAGCTGCGGCCACAGAGGGCGCAACGCACAGCTGTaGGCCTGGACCGTCCAGCCCGTCGCCGCCGATTCT +
Preference number: 6 (lower is better)
Translates to: GSCGHRGRNAQL*AWTVQPVAADS
Trigger: AGAATCGGCGGCGACGGGCTGGACGGTCCAGGCGCACAGCTGTGCGTTGCGCCCTCTGTGGCCGCAGCTTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp GCCTTTCGGGTGCCCCCACCCCCACGCCGTTCCATGTaGACCCGCTGGTGGCTGGCCAGCTGTTTCCGCAGG +
Preference number: 6 (lower is better)
Translates to: AFRVPPPPRRSM*TRWWLASCFRR
Trigger: CCTGCGGAAACAGCTGGCCAGCCACCAGCGGGTCCACATGGAACGGCGTGGGGGTGGGGGCACCCGAAAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp GCCCGCTTCCGATGCCGCCTGCTCCGCCGCCGACTGTaGCGGCGCAAGTGGTTCTTCATGGCAGCCATGGTG +
Preference number: 6 (lower is better)
Translates to: ARFRCRLLRRRL*RRKWFFMAAMV
Trigger: CACCATGGCTGCCATGAAGAACCACTTGCGCCGGCACAGTCGGCGGCGGAGCAGGCGGCATCGGAAGCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp AGCGGAAGGGCCGATCTTCCCGAGTCGCCTTTCGGGTaGCCCCACCCCCACGCCGTTCCATGTGGACCCGCT +
Preference number: 6 (lower is better)
Translates to: SGRADLPESPFG*PHPHAVPCGPA
Trigger: AGCGGGTCCACATGGAACGGCGTGGGGGTGGGGGCACCCGAAAGGCGACTCGGGAAGATCGGCCCTTCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp CCGGAGCCGGCCACCGTCCACTCCTCCTGGTGCTGCTaGTGGTGCTGCACGAAGCTGATTCGGCGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: PEPATVHSSWCC*WCCTKLIRRRK
Trigger: CTTCCGCCGCCGAATCAGCTTCGTGCAGCACCAGCAGCAGCACCAGGAGGAGTGGACGGTGGCCGGCTCCGG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp TGCGGCCACAGAGGGCGCAACGCACAGCTGTGCGCCTaGACCGTCCAGCCCGTCGCCGCCGATTCTCTGAGT +
Preference number: 6 (lower is better)
Translates to: CGHRGRNAQLCA*TVQPVAADSLS
Trigger: ACTCAGAGAATCGGCGGCGACGGGCTGGACGGTCCAGGCGCACAGCTGTGCGTTGCGCCCTCTGTGGCCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp GTTCAGAAGGAGCAGACACGTGGCAGCACCTTCCTCTaGTGGAGGGGCCAAGGCCTCGCACCGGCGGCCCCC +
Preference number: 6 (lower is better)
Translates to: VQKEQTRGSTFL*WRGQGLAPAAP
Trigger: GGGGGCCGCCGGTGCGAGGCCTTGGCCCCTCCACCAGAGGAAGGTGCTGCCACGTGTCTGCTCCTTCTGAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428260.1
CDS CCA 72 bp TCAGGGCCATGCGGTTGGAGTAGGTCTTGGGGCAGGTaGGGCAGCTGTACTGGCCCGTCTCGTGGCTGCGCC +
Preference number: 6 (lower is better)
Translates to: SGPCGWSRSWGR*GSCTGPSRGCA
Trigger: GGCGCAGCCACGAGACGGGCCAGTACAGCTGCCCCACCTGCCCCAAGACCTACTCCAACCGCATGGCCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp CAGTTGGGGACCGCGAACAAGAGCGCGCCTGCGCACTaGGACCCTTACCCTAACTGCAGCCGCGCGCCCCAA +
Preference number: 6 (lower is better)
Translates to: QLGTANKSAPAH*DPYPNCSRAPQ
Trigger: TTGGGGCGCGCGGCTGCAGTTAGGGTAAGGGTCCCAGTGCGCAGGCGCGCTCTTGTTCGCGGTCCCCAACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428260.1
ENST00000564189.1
CDS TCA 72 bp CCTCTGCCTCCACTGGGTCAGGCGGGAGTTCTACCTTaGGGTGGCTGGGGGCACCCTCAGCCCCGATGTCTG +
Preference number: 6 (lower is better)
Translates to: PLPPLGQAGVLP*GGWGHPQPRCL
Trigger: CAGACATCGGGGCTGAGGGTGCCCCCAGCCACCTCAAGGTAGAACTCCCGCCTGACCCAGTGGAGGCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp CTGGACCGTCCAGCCCGTCGCCGCCGATTCTCTGAGTaGAGCCTCTGGTGGTCCTTCAGGGCCATGCGGTTG +
Preference number: 6 (lower is better)
Translates to: LDRPARRRRFSE*SLWWSFRAMRL
Trigger: CAACCGCATGGCCCTGAAGGACCACCAGAGGCTGCACTCAGAGAATCGGCGGCGACGGGCTGGACGGTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp GCTGGCTCCCTTTCTGTCTCCTCATGCTCCCGCAGGTaGCGCTCCAAAGATCCCCGGCCAGGGAAGCTGCGG +
Preference number: 6 (lower is better)
Translates to: AGSLSVSSCSRR*RSKDPRPGKLR
Trigger: CCGCAGCTTCCCTGGCCGGGGATCTTTGGAGCGGCACCTGCGGGAGCATGAGGAGACAGAAAGGGAGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 90 bp CTGGGGGCACCCTCAGCCCCGATGTCTGCACTTCGGCGAGCAGCCTaGCAATGTACCCGCACGTGGTTGCGCAGGGCCATGAGATTGGGG +
Preference number: 6 (lower is better)
Translates to: LGAPSAPMSALRRAA*QCTRTWLRRAMRLG
Trigger: CCCCAATCTCATGGCCCTGCGCAACCACGTGCGGGTACATTGCAAGGCTGCTCGCCGAAGTGCAGACATCGGGGCTGAGGGTGCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS TCA 72 bp CGGCGTGCTTGTAGGATCGGCCACACACCTCGCAGCTaGAGGGCCGCTCAGAGCTGGCTTCAGTCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: RRACRIGHTPRS*RAAQSWLQSGS
Trigger: GCTGCCAGACTGAAGCCAGCTCTGAGCGGCCCTTCAGCTGCGAGGTGTGTGGCCGATCCTACAAGCACGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp GGCTCTGGCAGAGTTAGTGGAGGGTCCCCAGCCGTCTaGACCATCCTCAGGACCTGGGTGGCTTGCCAAGCC +
Preference number: 6 (lower is better)
Translates to: GSGRVSGGSPAV*TILRTWVACQA
Trigger: GGCTTGGCAAGCCACCCAGGTCCTGAGGATGGTGCAGACGGCTGGGGACCCTCCACTAACTCTGCCAGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS GCA 72 bp GGCTCCCCCGGTGGCGGTAAGCACGACCACACTCACTaGACTTATAGGGCCGATGGTCCAGGGTGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: GSPGGGKHDHTH*TYRADGPGWWW
Trigger: CCACCACCACCCTGGACCATCGGCCCTATAAGTGCAGTGAGTGTGGTCGTGCTTACCGCCACCGGGGGAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp GTTCAGAAGGAGCAGACACGTGGCAGCACCTTCCTCTaGTGGAGGGGCCAAGGCCCTAACTGCAGCCGCGCG +
Preference number: 6 (lower is better)
Translates to: VQKEQTRGSTFL*WRGQGPNCSRA
Trigger: CGCGCGGCTGCAGTTAGGGCCTTGGCCCCTCCACCAGAGGAAGGTGCTGCCACGTGTCTGCTCCTTCTGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300850.5
CDS CCA 72 bp GCCTCCACTGGGTCAGGCGGGAGTTCTACCTTGAGGTaGCTGGGGGCACCCTCAGCCCCGATGTCTGCACTT +
Preference number: 6 (lower is better)
Translates to: ASTGSGGSSTLR*LGAPSAPMSAL
Trigger: AAGTGCAGACATCGGGGCTGAGGGTGCCCCCAGCCACCTCAAGGTAGAACTCCCGCCTGACCCAGTGGAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp GTCCTGATCTGTGTGCGGGGCTGCCTCTGCCTCCACTaGGTCAGGCGGGAGTTCTACCTTGAGGTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: VLICVRGCLCLH*VRREFYLEVAG
Trigger: CCCAGCCACCTCAAGGTAGAACTCCCGCCTGACCCAGTGGAGGCAGAGGCAGCCCCGCACACAGATCAGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp TGCCGCCTGCTCCGCCGCCGACTGTGCCGGCGCAAGTaGTTCTTCATGGCAGCCATGGTGTGGAAGTGCTTG +
Preference number: 6 (lower is better)
Translates to: CRLLRRRLCRRK*FFMAAMVWKCL
Trigger: CAAGCACTTCCACACCATGGCTGCCATGAAGAACCACTTGCGCCGGCACAGTCGGCGGCGGAGCAGGCGGCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp TCGCAGCTGAAGGGCCGCTCAGAGCTGGCTTCAGTCTaGCAGCCCTTCTCGGCAGTCTCCAGCCTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: SQLKGRSELASV*QPFSAVSSLGS
Trigger: AGAGCCCAGGCTGGAGACTGCCGAGAAGGGCTGCCAGACTGAAGCCAGCTCTGAGCGGCCCTTCAGCTGCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 72 bp CCCTCAGCCCCGATGTCTGCACTTCGGCGAGCAGCCTaGCAATGTACCCGCACGTGGTTGCGCAGGGCCATG +
Preference number: 6 (lower is better)
Translates to: PSAPMSALRRAA*QCTRTWLRRAM
Trigger: CATGGCCCTGCGCAACCACGTGCGGGTACATTGCAAGGCTGCTCGCCGAAGTGCAGACATCGGGGCTGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp CCCGCCCACACTGCTGACAACGGTAGGGCCGAGGGATaGTGTCAGCCTCCTCACTGTCCTGGTTGGGAGATG +
Preference number: 6 (lower is better)
Translates to: PAHTADNGRAEG*CQPPHCPGWEM
Trigger: CATCTCCCAACCAGGACAGTGAGGAGGCTGACAGCATCCCTCGGCCCTACCGTTGTCAGCAGTGTGGGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS GCA 72 bp CCCCACCCTGGATGCAGAGGCTGTCTCCCAAGGGGGTaGCTGCTCCCTCTTGAGACTTGGCATCTCCACCCT +
Preference number: 6 (lower is better)
Translates to: PHPGCRGCLPRG*LLPLETWHLHP
Trigger: AGGGTGGAGATGCCAAGTCTCAAGAGGGAGCAGGCACCCCCTTGGGAGACAGCCTCTGCATCCAGGGTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp TCTCTGAGTGCAGCCTCTGGTGGTCCTTCAGGGCCATaGGGTTGGAGTAGGTCTTGGGGCAGGTGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: SLSAASGGPSGP*GWSRSWGRWGS
Trigger: GCTGCCCCACCTGCCCCAAGACCTACTCCAACCGCATGGCCCTGAAGGACCACCAGAGGCTGCACTCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp GGAGGGTCCCCAGCCGTCTGCACCATCCTCAGGACCTaGGTGGCTTGCCAAGCCTTCTCTTTGTCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: GGSPAVCTILRT*VACQAFSLSGG
Trigger: CCCACCAGACAAAGAGAAGGCTTGGCAAGCCACCCAGGTCCTGAGGATGGTGCAGACGGCTGGGGACCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CCA 72 bp GCCCCAGCCTGCCAGCCAGTGACAGCATTGGCAGAGTaGGAAGAGGAGTTGGGTTGGCCAGTGGCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: APACQPVTALAE*EEELGWPVAGF
Trigger: GAAGCCAGCCACTGGCCAACCCAACTCCTCTTCCCACTCTGCCAATGCTGTCACTGGCTGGCAGGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp GGCTGTGCTGAGGTCGCCTCCCCAGGCCTATGGTTCTaGAAGTGGCTGCGGAGGGCAGGCAGAGAGTCAAAC +
Preference number: 6 (lower is better)
Translates to: GCAEVASPGLWF*KWLRRAGRESN
Trigger: GTTTGACTCTCTGCCTGCCCTCCGCAGCCACTTCCAGAACCATAGGCCTGGGGAGGCGACCTCAGCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp CAGCTGATTCAGCAGCTCTGCTTCCGAGAGCTGCAGTaGTGGACTGCGTGCAGGGGCTGCCTCTGCCACTCC +
Preference number: 6 (lower is better)
Translates to: QLIQQLCFRELQ*WTACRGCLCHS
Trigger: GGAGTGGCAGAGGCAGCCCCTGCACGCAGTCCACCACTGCAGCTCTCGGAAGCAGAGCTGCTGAATCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 90 bp TGTGCACTGGGGAGCTGGTCCTGGCTGCTCTCATCTGTGTGCCCATaGGTGGTGGGCATCCCTTTCTCCTCCCAGCGTGGCTCCTGCCTT +
Preference number: 6 (lower is better)
Translates to: CALGSWSWLLSSVCP*VVGIPFSSQRGSCL
Trigger: AAGGCAGGAGCCACGCTGGGAGGAGAAAGGGATGCCCACCACCAATGGGCACACAGATGAGAGCAGCCAGGACCAGCTCCCCAGTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS TCA 72 bp AGGGACATGAGGTTTGAGAAGCCCTTGGAGCAGGCCTaGCAGCCAAAGTGGCCGGTCTGGTGGCTCTGCCGG +
Preference number: 6 (lower is better)
Translates to: RDMRFEKPLEQA*QPKWPVWWLCR
Trigger: CCGGCAGAGCCACCAGACCGGCCACTTTGGCTGTCAGGCCTGCTCCAAGGGCTTCTCAAACCTCATGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp CTGTCCTGGTTGGGAGATGGATGGAGCAGTTCTCGGTaGCGAGAGAGCTCTGGGAGGCTGGGAAAGTGGCGC +
Preference number: 6 (lower is better)
Translates to: LSWLGDGWSSSR*RESSGRLGKWR
Trigger: GCGCCACTTTCCCAGCCTCCCAGAGCTCTCTCGGCACCGAGAACTGCTCCATCCATCTCCCAACCAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
ENST00000564189.1
CDS GCA 72 bp GCACTGGGGAGCTGGTCCTGGCTGCTCTCATCTGTGTaGCCATTGGTGGTGGGCATCCCTTTCTCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: ALGSWSWLLSSV*PLVVGIPFSSQ
Trigger: CTGGGAGGAGAAAGGGATGCCCACCACCAATGGGCACACAGATGAGAGCAGCCAGGACCAGCTCCCCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp ACCCTGGATGCAGAGGCTGTCTCCCAAGGGGGTGCCTaGTCCCTCTTGAGACTTGGCATCTCCACCCTCTCC +
Preference number: 6 (lower is better)
Translates to: TLDAEAVSQGGA*SLLRLGISTLS
Trigger: GGAGAGGGTGGAGATGCCAAGTCTCAAGAGGGAGCAGGCACCCCCTTGGGAGACAGCCTCTGCATCCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp GCTCAGCACCACCCAATTGGGTCTCTAGTCCCTGGCTaGCAGTCAGGTTCGCCTCACTGGCCGCTGTGCCAT +
Preference number: 6 (lower is better)
Translates to: AQHHPIGSLVPG*QSGSPHWPLCH
Trigger: ATGGCACAGCGGCCAGTGAGGCGAACCTGACTGGCAGCCAGGGACTAGAGACCCAATTGGGTGGTGCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp GCTGGTCCTGGCTGCTCTCATCTGTGTGCCCATTGGTaGTGGGCATCCCTTTCTCCTCCCAGCGTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: AGPGCSHLCAHW*WASLSPPSVAP
Trigger: AGGAGCCACGCTGGGAGGAGAAAGGGATGCCCACCACCAATGGGCACACAGATGAGAGCAGCCAGGACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp GGAGCTGGTCCTGGCTGCTCTCATCTGTGTGCCCATTaGTGGTGGGCATCCCTTTCTCCTCCCAGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: GAGPGCSHLCAH*WWASLSPPSVA
Trigger: AGCCACGCTGGGAGGAGAAAGGGATGCCCACCACCAATGGGCACACAGATGAGAGCAGCCAGGACCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp GCACTTCGGCGAGCAGCCTTGCAATGTACCCGCACGTaGTTGCGCAGGGCCATGAGATTGGGGTACTTGCGG +
Preference number: 6 (lower is better)
Translates to: ALRRAALQCTRT*LRRAMRLGYLR
Trigger: CCGCAAGTACCCCAATCTCATGGCCCTGCGCAACCACGTGCGGGTACATTGCAAGGCTGCTCGCCGAAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp CTGATTCAGCAGCTCTGCTTCCGAGAGCTGCAGTGGTaGACTGCGTGCAGGGGCTGCCTCTGCCACTCCTTC +
Preference number: 6 (lower is better)
Translates to: LIQQLCFRELQW*TACRGCLCHSF
Trigger: GAAGGAGTGGCAGAGGCAGCCCCTGCACGCAGTCCACCACTGCAGCTCTCGGAAGCAGAGCTGCTGAATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp ACTGGCTCAGCACCACCCAATTGGGTCTCTAGTCCCTaGCTGCCAGTCAGGTTCGCCTCACTGGCCGCTGTG +
Preference number: 6 (lower is better)
Translates to: TGSAPPNWVSSP*LPVRFASLAAV
Trigger: CACAGCGGCCAGTGAGGCGAACCTGACTGGCAGCCAGGGACTAGAGACCCAATTGGGTGGTGCTGAGCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp CTGCGCTCCCCTGGCCTTGGGACTCCATCCTCCAAGTaGGGTACTGGCTCAGCACCACCCAATTGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: LRSPGLGTPSSK*GTGSAPPNWVS
Trigger: AGAGACCCAATTGGGTGGTGCTGAGCCAGTACCCCACTTGGAGGATGGAGTCCCAAGGCCAGGGGAGCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 72 bp CTTCGGCGAGCAGCCTTGCAATGTACCCGCACGTGGTaGCGCAGGGCCATGAGATTGGGGTACTTGCGGGGA +
Preference number: 6 (lower is better)
Translates to: LRRAALQCTRTW*RRAMRLGYLRG
Trigger: TCCCCGCAAGTACCCCAATCTCATGGCCCTGCGCAACCACGTGCGGGTACATTGCAAGGCTGCTCGCCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 72 bp TCCCCTGAAGGGTCTTGGGGAGACTCCAGGCCTTCATaGTCTTCTAGCTCCCGGGTCCAGCTCTCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: SPEGSWGDSRPS*SSSSRVQLSAA
Trigger: GGCAGCGGAGAGCTGGACCCGGGAGCTAGAAGACAATGAAGGCCTGGAGTCTCCCCAAGACCCTTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 90 bp GTCTGCACCATCCTCAGGACCTGGGTGGCTTGCCAAGCCTTCTCTTaGTCTGGTGGGCAGATCTTCCCACGTACCCGAAGCTGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: VCTILRTWVACQAFS*SGGQIFPRTRSCPG
Trigger: CCCAGGGCAGCTTCGGGTACGTGGGAAGATCTGCCCACCAGACAAAGAGAAGGCTTGGCAAGCCACCCAGGTCCTGAGGATGGTGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS TCA 72 bp CAGGGCCATGAGATTGGGGTACTTGCGGGGACAGAGTaGGCACTGGTACTCTCCAGTCCGATGGCTGTGGCG +
Preference number: 6 (lower is better)
Translates to: QGHEIGVLAGTE*ALVLSSPMAVA
Trigger: CGCCACAGCCATCGGACTGGAGAGTACCAGTGCTCACTCTGTCCCCGCAAGTACCCCAATCTCATGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS TCA 72 bp GCATGGGGGAAAGAATGCCCACAGTCAGAGCATGTGTaGGCGGCCCCAGCCTGCCAGCCAGTGACAGCATTG +
Preference number: 6 (lower is better)
Translates to: AWGKECPQSEHV*AAPACQPVTAL
Trigger: CAATGCTGTCACTGGCTGGCAGGCTGGGGCCGCTCACACATGCTCTGACTGTGGGCATTCTTTCCCCCATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp CTTCCCACACTCGCTGCAGCGGAAACGTCGGGGATCTaGATGGATGCGCCGGTGGTTCTTGAGGGACATGAG +
Preference number: 6 (lower is better)
Translates to: LPTLAAAETSGI*MDAPVVLEGHE
Trigger: CTCATGTCCCTCAAGAACCACCGGCGCATCCATGCAGATCCCCGACGTTTCCGCTGCAGCGAGTGTGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp CTGTCAGCCTCCTCACTGTCCTGGTTGGGAGATGGATaGAGCAGTTCTCGGTGCCGAGAGAGCTCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: LSASSLSWLGDG*SSSRCRESSGR
Trigger: CCTCCCAGAGCTCTCTCGGCACCGAGAACTGCTCCATCCATCTCCCAACCAGGACAGTGAGGAGGCTGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
ENST00000564189.1
CDS CCA 72 bp CAGGACCTGGGTGGCTTGCCAAGCCTTCTCTTTGTCTaGTGGGCAGATCTTCCCACGTACCCGAAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: QDLGGLPSLLFV*WADLPTYPKLP
Trigger: GGGCAGCTTCGGGTACGTGGGAAGATCTGCCCACCAGACAAAGAGAAGGCTTGGCAAGCCACCCAGGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CCA 72 bp TCCTCCAAGTGGGGTACTGGCTCAGCACCACCCAATTaGGTCTCTAGTCCCTGGCTGCCAGTCAGGTTCGCC +
Preference number: 6 (lower is better)
Translates to: SSKWGTGSAPPN*VSSPWLPVRFA
Trigger: GGCGAACCTGACTGGCAGCCAGGGACTAGAGACCCAATTGGGTGGTGCTGAGCCAGTACCCCACTTGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 72 bp CGCACGTGGTTGCGCAGGGCCATGAGATTGGGGTACTaGCGGGGACAGAGTGAGCACTGGTACTCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: RTWLRRAMRLGY*RGQSEHWYSPV
Trigger: GACTGGAGAGTACCAGTGCTCACTCTGTCCCCGCAAGTACCCCAATCTCATGGCCCTGCGCAACCACGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 90 bp CAATGTACCCGCACGTGGTTGCGCAGGGCCATGAGATTGGGGTACTaGCGGGGACAGAGTGAGCACTGGTACTCTCCAGTCCGATGGCTG +
Preference number: 6 (lower is better)
Translates to: QCTRTWLRRAMRLGY*RGQSEHWYSPVRWL
Trigger: CAGCCATCGGACTGGAGAGTACCAGTGCTCACTCTGTCCCCGCAAGTACCCCAATCTCATGGCCCTGCGCAACCACGTGCGGGTACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 90 bp GCAGCCTTGCAATGTACCCGCACGTGGTTGCGCAGGGCCATGAGATaGGGGTACTTGCGGGGACAGAGTGAGCACTGGTACTCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: AALQCTRTWLRRAMR*GYLRGQSEHWYSPV
Trigger: GACTGGAGAGTACCAGTGCTCACTCTGTCCCCGCAAGTACCCCAATCTCATGGCCCTGCGCAACCACGTGCGGGTACATTGCAAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 90 bp ATGTCTGCACTTCGGCGAGCAGCCTTGCAATGTACCCGCACGTGGTaGCGCAGGGCCATGAGATTGGGGTACTTGCGGGGACAGAGTGAG +
Preference number: 6 (lower is better)
Translates to: MSALRRAALQCTRTW*RRAMRLGYLRGQSE
Trigger: CTCACTCTGTCCCCGCAAGTACCCCAATCTCATGGCCCTGCGCAACCACGTGCGGGTACATTGCAAGGCTGCTCGCCGAAGTGCAGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 90 bp TGCCGGCGCAAGTGGTTCTTCATGGCAGCCATGGTGTGGAAGTGCTaGGCACAGGCCCCACAACTGAAGTCTCCTGTCTGGTGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: CRRKWFFMAAMVWKC*AQAPQLKSPVWWVC
Trigger: GCAGACCCACCAGACAGGAGACTTCAGTTGTGGGGCCTGTGCCAAGCACTTCCACACCATGGCTGCCATGAAGAACCACTTGCGCCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 90 bp CAAGGGGCTGGGAGCCTTGTCTGCAGTAGTCCCAGAACTCTGACTTaGGTGGTGACGCTCCAGGCTCCCCAGGTCATCGTAGGTCTGACC +
Preference number: 6 (lower is better)
Translates to: QGAGSLVCSSPRTLT*VVTLQAPQVIVGLT
Trigger: GGTCAGACCTACGATGACCTGGGGAGCCTGGAGCGTCACCACCAAAGTCAGAGTTCTGGGACTACTGCAGACAAGGCTCCCAGCCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS TCA 72 bp CCTTGCAATGTACCCGCACGTGGTTGCGCAGGGCCATaGGATTGGGGTACTTGCGGGGACAGAGTGAGCACT +
Preference number: 6 (lower is better)
Translates to: PCNVPARGCAGP*DWGTCGDRVST
Trigger: AGTGCTCACTCTGTCCCCGCAAGTACCCCAATCTCATGGCCCTGCGCAACCACGTGCGGGTACATTGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS TCA 72 bp TCCGTGGCCTCTTCTTCATGTTTGCACACATGGTCCTaGTCTGTGTGCGGGGCTGCCTCTGCCTCCACTGGG +
Preference number: 6 (lower is better)
Translates to: SVASSSCLHTWS*SVCGAASASTG
Trigger: CCCAGTGGAGGCAGAGGCAGCCCCGCACACAGATCAGGACCATGTGTGCAAACATGAAGAAGAGGCCACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp CCAGCCGTCTGCACCATCCTCAGGACCTGGGTGGCTTaGCAAGCCTTCTCTTTGTCTGGTGGGCAGATCTTC +
Preference number: 6 (lower is better)
Translates to: PAVCTILRTWVA*QAFSLSGGQIF
Trigger: GAAGATCTGCCCACCAGACAAAGAGAAGGCTTGGCAAGCCACCCAGGTCCTGAGGATGGTGCAGACGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS GCA 72 bp AGAGGTGCTGAGCTCCGCAGAGCCATTCAGCATCTGTaGACTGGGGAGCTGGTCCTGGCTGCTCTCATCTGT +
Preference number: 6 (lower is better)
Translates to: RGAELRRAIQHL*TGELVLAALIC
Trigger: ACAGATGAGAGCAGCCAGGACCAGCTCCCCAGTGCACAGATGCTGAATGGCTCTGCGGAGCTCAGCACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp CAAGACACTGTCCACGACCATCTCCATGGCATCACCTaGCACTCCCAAGGGGCTGGGAGCCTTGTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: QDTVHDHLHGIT*HSQGAGSLVCS
Trigger: ACTGCAGACAAGGCTCCCAGCCCCTTGGGAGTGGCAGGTGATGCCATGGAGATGGTCGTGGACAGTGTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp GTCTGGTTTTCCCAGCCTTCACTAGAGCCAAGCCTTTaGCCCCAGGAGTCAGTGGACACCGTCTCACCCTGG +
Preference number: 6 (lower is better)
Translates to: VWFSQPSLEPSL*PQESVDTVSPW
Trigger: CCAGGGTGAGACGGTGTCCACTGACTCCTGGGGCCAAAGGCTTGGCTCTAGTGAAGGCTGGGAAAACCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CCA 72 bp CACTGCACTTATAGGGCCGATGGTCCAGGGTGGTGGTaGGGTCCTCTTCCTCTTTGTGGGTGGTCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: HCTYRADGPGWW*GPLPLCGWSQP
Trigger: TGGCTGAGACCACCCACAAAGAGGAAGAGGACCCCACCACCACCCTGGACCATCGGCCCTATAAGTGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp CCACACTCGCTGCAGCGGAAACGTCGGGGATCTGCATaGATGCGCCGGTGGTTCTTGAGGGACATGAGGTTT +
Preference number: 6 (lower is better)
Translates to: PHSLQRKRRGSA*MRRWFLRDMRF
Trigger: AAACCTCATGTCCCTCAAGAACCACCGGCGCATCCATGCAGATCCCCGACGTTTCCGCTGCAGCGAGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 72 bp CAATGTACCCGCACGTGGTTGCGCAGGGCCATGAGATaGGGGTACTTGCGGGGACAGAGTGAGCACTGGTAC +
Preference number: 6 (lower is better)
Translates to: QCTRTWLRRAMR*GYLRGQSEHWY
Trigger: GTACCAGTGCTCACTCTGTCCCCGCAAGTACCCCAATCTCATGGCCCTGCGCAACCACGTGCGGGTACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 90 bp CTGTGCCTGCGGCGGCCCTCAGGAGCATGTGTCCTCATATGGCTCTaGAGAGCCATGGGATTGGAGAAGTCCTTGCCACAGGTGGTACAG +
Preference number: 6 (lower is better)
Translates to: LCLRRPSGACVLIWL*RAMGLEKSLPQVVQ
Trigger: CTGTACCACCTGTGGCAAGGACTTCTCCAATCCCATGGCTCTCAAGAGCCATATGAGGACACATGCTCCTGAGGGCCGCCGCAGGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS TCA 72 bp GGCGGCCCTCAGGAGCATGTGTCCTCATATGGCTCTTaGGAGCCATGGGATTGGAGAAGTCCTTGCCACAGG +
Preference number: 6 (lower is better)
Translates to: GGPQEHVSSYGS*EPWDWRSPCHR
Trigger: CCTGTGGCAAGGACTTCTCCAATCCCATGGCTCTCAAGAGCCATATGAGGACACATGCTCCTGAGGGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CCA 72 bp TGCCTGCGGCGGCCCTCAGGAGCATGTGTCCTCATATaGCTCTTGAGAGCCATGGGATTGGAGAAGTCCTTG +
Preference number: 6 (lower is better)
Translates to: CLRRPSGACVLI*LLRAMGLEKSL
Trigger: CAAGGACTTCTCCAATCCCATGGCTCTCAAGAGCCATATGAGGACACATGCTCCTGAGGGCCGCCGCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CCA 72 bp ACTCACTGCACTTATAGGGCCGATGGTCCAGGGTGGTaGTGGGGTCCTCTTCCTCTTTGTGGGTGGTCTCAG +
Preference number: 6 (lower is better)
Translates to: THCTYRADGPGW*WGPLPLCGWSQ
Trigger: CTGAGACCACCCACAAAGAGGAAGAGGACCCCACCACCACCCTGGACCATCGGCCCTATAAGTGCAGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp CACACTCACTGCACTTATAGGGCCGATGGTCCAGGGTaGTGGTGGGGTCCTCTTCCTCTTTGTGGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: HTHCTYRADGPG*WWGPLPLCGWS
Trigger: AGACCACCCACAAAGAGGAAGAGGACCCCACCACCACCCTGGACCATCGGCCCTATAAGTGCAGTGAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp TTGGCACAGGCCCCACAACTGAAGTCTCCTGTCTGGTaGGTCTGCCTGTGGTTGATAAGGCTGCCTGAGTGG +
Preference number: 6 (lower is better)
Translates to: LAQAPQLKSPVW*VCLWLIRLPEW
Trigger: CCACTCAGGCAGCCTTATCAACCACAGGCAGACCCACCAGACAGGAGACTTCAGTTGTGGGGCCTGTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp TGCTTGGCACAGGCCCCACAACTGAAGTCTCCTGTCTaGTGGGTCTGCCTGTGGTTGATAAGGCTGCCTGAG +
Preference number: 6 (lower is better)
Translates to: CLAQAPQLKSPV*WVCLWLIRLPE
Trigger: CTCAGGCAGCCTTATCAACCACAGGCAGACCCACCAGACAGGAGACTTCAGTTGTGGGGCCTGTGCCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp TGGGAAGAGGAGTTGGGTTGGCCAGTGGCTGGCTTCTaGTCTTCATCCACCCCAGTGAGGCTATCGCAGAAG +
Preference number: 6 (lower is better)
Translates to: WEEELGWPVAGF*SSSTPVRLSQK
Trigger: CTTCTGCGATAGCCTCACTGGGGTGGATGAAGACCAGAAGCCAGCCACTGGCCAACCCAACTCCTCTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp CAGCGGAAACGTCGGGGATCTGCATGGATGCGCCGGTaGTTCTTGAGGGACATGAGGTTTGAGAAGCCCTTG +
Preference number: 6 (lower is better)
Translates to: QRKRRGSAWMRR*FLRDMRFEKPL
Trigger: CAAGGGCTTCTCAAACCTCATGTCCCTCAAGAACCACCGGCGCATCCATGCAGATCCCCGACGTTTCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 72 bp CGGCGGCCCTCAGGAGCATGTGTCCTCATATGGCTCTaGAGAGCCATGGGATTGGAGAAGTCCTTGCCACAG +
Preference number: 6 (lower is better)
Translates to: RRPSGACVLIWL*RAMGLEKSLPQ
Trigger: CTGTGGCAAGGACTTCTCCAATCCCATGGCTCTCAAGAGCCATATGAGGACACATGCTCCTGAGGGCCGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CAA 72 bp TGTCTGGTTTTCCCAGCCTTCACTAGAGCCAAGCCTTaGGCCCCAGGAGTCAGTGGACACCGTCTCACCCTG +
Preference number: 6 (lower is better)
Translates to: CLVFPAFTRAKP*APGVSGHRLTL
Trigger: CAGGGTGAGACGGTGTCCACTGACTCCTGGGGCCAAAGGCTTGGCTCTAGTGAAGGCTGGGAAAACCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CAA 72 bp ATCCTCAGGACCTGGGTGGCTTGCCAAGCCTTCTCTTaGTCTGGTGGGCAGATCTTCCCACGTACCCGAAGC +
Preference number: 6 (lower is better)
Translates to: ILRTWVACQAFS*SGGQIFPRTRS
Trigger: GCTTCGGGTACGTGGGAAGATCTGCCCACCAGACAAAGAGAAGGCTTGGCAAGCCACCCAGGTCCTGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CAA 72 bp GGGAGCCTTGTCTGCAGTAGTCCCAGAACTCTGACTTaGGTGGTGACGCTCCAGGCTCCCCAGGTCATCGTA +
Preference number: 6 (lower is better)
Translates to: GSLVCSSPRTLT*VVTLQAPQVIV
Trigger: TACGATGACCTGGGGAGCCTGGAGCGTCACCACCAAAGTCAGAGTTCTGGGACTACTGCAGACAAGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS TCA 72 bp GAGGGCAGCCGCATTGAACAGCTGCTTAGAACAGAGTaGGCAGGGGTAGACACCTGTCTGGTGGCTCTTTCG +
Preference number: 6 (lower is better)
Translates to: EGSRIEQLLRTE*AGVDTCLVALS
Trigger: CGAAAGAGCCACCAGACAGGTGTCTACCCCTGCTCACTCTGTTCTAAGCAGCTGTTCAATGCGGCTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS TCA 72 bp ATGGATGCGCCGGTGGTTCTTGAGGGACATGAGGTTTaGGAAGCCCTTGGAGCAGGCCTGACAGCCAAAGTG +
Preference number: 6 (lower is better)
Translates to: MDAPVVLEGHEV*EALGAGLTAKV
Trigger: CACTTTGGCTGTCAGGCCTGCTCCAAGGGCTTCTCAAACCTCATGTCCCTCAAGAACCACCGGCGCATCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp TTGTCTGGTGGGCAGATCTTCCCACGTACCCGAAGCTaGCCTGGGGTCAGGTACAGATTCACAGTCAGGTGT +
Preference number: 6 (lower is better)
Translates to: LSGGQIFPRTRS*PGVRYRFTVRC
Trigger: ACACCTGACTGTGAATCTGTACCTGACCCCAGGGCAGCTTCGGGTACGTGGGAAGATCTGCCCACCAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CCA 72 bp TGGTGGGCAGATCTTCCCACGTACCCGAAGCTGCCCTaGGGTCAGGTACAGATTCACAGTCAGGTGTCTCTT +
Preference number: 6 (lower is better)
Translates to: WWADLPTYPKLP*GQVQIHSQVSL
Trigger: AAGAGACACCTGACTGTGAATCTGTACCTGACCCCAGGGCAGCTTCGGGTACGTGGGAAGATCTGCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CCA 72 bp ATGAGATTGGGGTACTTGCGGGGACAGAGTGAGCACTaGTACTCTCCAGTCCGATGGCTGTGGCGATGGTTC +
Preference number: 6 (lower is better)
Translates to: MRLGYLRGQSEH*YSPVRWLWRWF
Trigger: GAACCATCGCCACAGCCATCGGACTGGAGAGTACCAGTGCTCACTCTGTCCCCGCAAGTACCCCAATCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 72 bp AAACGTCGGGGATCTGCATGGATGCGCCGGTGGTTCTaGAGGGACATGAGGTTTGAGAAGCCCTTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: KRRGSAWMRRWF*RDMRFEKPLEQ
Trigger: CTGCTCCAAGGGCTTCTCAAACCTCATGTCCCTCAAGAACCACCGGCGCATCCATGCAGATCCCCGACGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 90 bp TGTGTCCTCATATGGCTCTTGAGAGCCATGGGATTGGAGAAGTCCTaGCCACAGGTGGTACAGGGGAAAAGGCCAGTCTCGTGGGTCCGA +
Preference number: 6 (lower is better)
Translates to: CVLIWLLRAMGLEKS*PQVVQGKRPVSWVR
Trigger: TCGGACCCACGAGACTGGCCTTTTCCCCTGTACCACCTGTGGCAAGGACTTCTCCAATCCCATGGCTCTCAAGAGCCATATGAGGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CAA 90 bp CCCTCAGGAGCATGTGTCCTCATATGGCTCTTGAGAGCCATGGGATaGGAGAAGTCCTTGCCACAGGTGGTACAGGGGAAAAGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: PSGACVLIWLLRAMG*EKSLPQVVQGKRPV
Trigger: GACTGGCCTTTTCCCCTGTACCACCTGTGGCAAGGACTTCTCCAATCCCATGGCTCTCAAGAGCCATATGAGGACACATGCTCCTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CAA 72 bp AAGTGGTTCTTCATGGCAGCCATGGTGTGGAAGTGCTaGGCACAGGCCCCACAACTGAAGTCTCCTGTCTGG +
Preference number: 6 (lower is better)
Translates to: KWFFMAAMVWKC*AQAPQLKSPVW
Trigger: CCAGACAGGAGACTTCAGTTGTGGGGCCTGTGCCAAGCACTTCCACACCATGGCTGCCATGAAGAACCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 72 bp ATATGGCTCTTGAGAGCCATGGGATTGGAGAAGTCCTaGCCACAGGTGGTACAGGGGAAAAGGCCAGTCTCG +
Preference number: 6 (lower is better)
Translates to: IWLLRAMGLEKS*PQVVQGKRPVS
Trigger: CGAGACTGGCCTTTTCCCCTGTACCACCTGTGGCAAGGACTTCTCCAATCCCATGGCTCTCAAGAGCCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS TCA 72 bp CTGGGTGGGCTCCTGGCCCCCTGTGAAGTTCACTACTaGTTCAGCCAGATACTGTTCCAAGTTGCTAAGAAG +
Preference number: 6 (lower is better)
Translates to: LGGLLAPCEVHY*FSQILFQVAKK
Trigger: CTTCTTAGCAACTTGGAACAGTATCTGGCTGAATCAGTAGTGAACTTCACAGGGGGCCAGGAGCCCACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS GCA 72 bp GTCTTCAAAGAGCAGCCCACAGATGCTACAGATATGTaGTGCTGTCTTGTCTGCTGCTGGGGTGATGTCCGT +
Preference number: 6 (lower is better)
Translates to: VFKEQPTDATDM*CCLVCCWGDVR
Trigger: ACGGACATCACCCCAGCAGCAGACAAGACAGCAGCACATATCTGTAGCATCTGTGGGCTGCTCTTTGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp CAAGGCTCTCAGCGTCTTCAAAGAGCAGCCCACAGATaGTACAGATATGTGCTGCTGTCTTGTCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: QGSQRLQRAAHR*YRYVLLSCLLL
Trigger: CAGCAGCAGACAAGACAGCAGCACATATCTGTAGCATCTGTGGGCTGCTCTTTGAAGACGCTGAGAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CAA 72 bp GCATGTGTCCTCATATGGCTCTTGAGAGCCATGGGATaGGAGAAGTCCTTGCCACAGGTGGTACAGGGGAAA +
Preference number: 6 (lower is better)
Translates to: ACVLIWLLRAMG*EKSLPQVVQGK
Trigger: TTTCCCCTGTACCACCTGTGGCAAGGACTTCTCCAATCCCATGGCTCTCAAGAGCCATATGAGGACACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300850.5
ENST00000394979.2
ENST00000428260.1
CDS CAA 90 bp TCTTCAAAGAGCAGCCCACAGATGCTACAGATATGTGCTGCTGTCTaGTCTGCTGCTGGGGTGATGTCCGTGGCCTCTTCTTCATGTTTG +
Preference number: 6 (lower is better)
Translates to: SSKSSPQMLQICAAV*SAAGVMSVASSSCL
Trigger: CAAACATGAAGAAGAGGCCACGGACATCACCCCAGCAGCAGACAAGACAGCAGCACATATCTGTAGCATCTGTGGGCTGCTCTTTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS GCA 72 bp CTCTCAAGCCCACATTTGTCCCCTTCAGATTCAGCCTaGAAACAGTCCCCATCACTTTCCAGGTTGCCTTCA +
Preference number: 6 (lower is better)
Translates to: LSSPHLSPSDSA*KQSPSLSRLPS
Trigger: TGAAGGCAACCTGGAAAGTGATGGGGACTGTTTGCAGGCTGAATCTGAAGGGGACAAATGTGGGCTTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS CCA 72 bp GATGCTACAGATATGTGCTGCTGTCTTGTCTGCTGCTaGGGTGATGTCCGTGGCCTCTTCTTCATGTTTGCA +
Preference number: 6 (lower is better)
Translates to: DATDMCCCLVCC*GDVRGLFFMFA
Trigger: TGCAAACATGAAGAAGAGGCCACGGACATCACCCCAGCAGCAGACAAGACAGCAGCACATATCTGTAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS TCA 72 bp TACAGATATGTGCTGCTGTCTTGTCTGCTGCTGGGGTaGTGTCCGTGGCCTCTTCTTCATGTTTGCACACAT +
Preference number: 6 (lower is better)
Translates to: YRYVLLSCLLLG*CPWPLLHVCTH
Trigger: ATGTGTGCAAACATGAAGAAGAGGCCACGGACATCACCCCAGCAGCAGACAAGACAGCAGCACATATCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300850.5
ENST00000394979.2
CDS TCA 72 bp AAGGAAATTAAAGTTGAGAGAGATGCAACCTACTTCTaGTCACAGACCTGTTATGTTCTTCAGACCAGACTC +
Preference number: 6 (lower is better)
Translates to: KEIKVERDATYF*SQTCYVLQTRL
Trigger: GAGTCTGGTCTGAAGAACATAACAGGTCTGTGATCAGAAGTAGGTTGCATCTCTCTCAACTTTAATTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394979.2