RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF641 (Homo sapiens)

Ensembl gene IDs: ENSG00000167528

Ensembl transcript IDs: ENST00000301042.7, ENST00000448928.7, ENST00000544117.6, ENST00000546874.1, ENST00000547026.6, ENST00000548932.5, ENST00000549125.5, ENST00000549512.1, ENST00000550181.5, ENST00000550342.1

Found 901 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCAGGAAAGTGGTGGTaGGGGAGGGCTTGGCTGAAGAACACACTGAGAGCAGGAGCAAGG +
Preference number: 1 (lower is better)
Translates to: MPRCLVARDKAGKWW*GRAWLKNTLRAGAR
Trigger: CCTTGCTCCTGCTCTCAGTGTGTTCTTCAGCCAAGCCCTCCCCCACCACCACTTTCCTGCCTTGTCTCTTGCCACCAGGCACCTGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CCA 90 bp AGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCAGGAAAGTGGTaGTGGGGGAGGGCTTGGCTGAAGAACACACTGAGAGCAGGAGCA +
Preference number: 1 (lower is better)
Translates to: RMPRCLVARDKAGKW*WGRAWLKNTLRAGA
Trigger: TGCTCCTGCTCTCAGTGTGTTCTTCAGCCAAGCCCTCCCCCACCACCACTTTCCTGCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CCA 90 bp GCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTaGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCAGGA +
Preference number: 1 (lower is better)
Translates to: AVGLHGKWAFIPKVS*KRMPRCLVARDKAG
Trigger: TCCTGCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR GCA 90 bp TGCCCTGGGGACTCTGATGTTCCTGCTGCCCTTGCCCATAGGGTATaGCAAATCATGGTTAGAAATCCCTTCCATGGCCCCTCGTTGGTC +
Preference number: 1 (lower is better)
Translates to: CPGDSDVPAALAHRV*QIMVRNPFHGPSLV
Trigger: GACCAACGAGGGGCCATGGAAGGGATTTCTAACCATGATTTGGCATACCCTATGGGCAAGGGCAGCAGGAACATCAGAGTCCCCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR GCA 90 bp TGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGGATaGCCAGGTGCCTGGTGGCAAGAGACAAGGCAGGAAAGTGGTGGT +
Preference number: 1 (lower is better)
Translates to: CMASGHSSPKFPGRG*PGAWWQETRQESGG
Trigger: ACCACCACTTTCCTGCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR TCA 90 bp GGCTTGGCTGAAGAACACACTGAGAGCAGGAGCAAGGGTCACATTTaGTCTCCCAGGCCTGAAATTGCCAGTGCCTGGCACATAATAAGG +
Preference number: 1 (lower is better)
Translates to: GLAEEHTESRSKGHI*SPRPEIASAWHIIR
Trigger: CCTTATTATGTGCCAGGCACTGGCAATTTCAGGCCTGGGAGATCAAATGTGACCCTTGCTCCTGCTCTCAGTGTGTTCTTCAGCCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CCA 90 bp TGCCCCTTCTGTAGAAGGCCCTTAGACTCCATGATGCCTTTCAGCTaGGTGCTATACTTGCACCTAACTCTGGGGGCTTCACTTTCTATC +
Preference number: 1 (lower is better)
Translates to: CPFCRRPLDSMMPFS*VLYLHLTLGASLSI
Trigger: GATAGAAAGTGAAGCCCCCAGAGTTAGGTGCAAGTATAGCACCCAGCTGAAAGGCATCATGGAGTCTAAGGGCCTTCTACAGAAGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR GCA 90 bp CACTTTTCTGATATTGCCCAGCCCCACCCACTCCCATTCAGTGCATaGATCCTAATTCAGAGATGGAAAGAACTGGCCTTCTGGCCTTTG +
Preference number: 1 (lower is better)
Translates to: HFSDIAQPHPLPFSA*ILIQRWKELAFWPL
Trigger: CAAAGGCCAGAAGGCCAGTTCTTTCCATCTCTGAATTAGGATGCATGCACTGAATGGGAGTGGGTGGGGCTGGGCAATATCAGAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CCA 90 bp ACTCTGATGTTCCTGCTGCCCTTGCCCATAGGGTATGCCAAATCATaGTTAGAAATCCCTTCCATGGCCCCTCGTTGGTCTCTAATCCAA +
Preference number: 1 (lower is better)
Translates to: TLMFLLPLPIGYAKS*LEIPSMAPRWSLIQ
Trigger: TTGGATTAGAGACCAACGAGGGGCCATGGAAGGGATTTCTAACCATGATTTGGCATACCCTATGGGCAAGGGCAGCAGGAACATCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR TCA 90 bp GCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCTaGATATCAGCCCATGTAGGATGCATTGCTTCCCAAAAGTTTTGC +
Preference number: 1 (lower is better)
Translates to: AINCQYHSPLENSSG*ISAHVGCIASQKFC
Trigger: GCAAAACTTTTGGGAAGCAATGCATCCTACATGGGCTGATATTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR GCA 90 bp ATTCAGATAATAGCTAGAAATCTGATAGGCACGGAGCAGTTGGGCTaGATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGGA +
Preference number: 1 (lower is better)
Translates to: IQIIARNLIGTEQLG*MASGHSSPKFPGRG
Trigger: TCCTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCTCCGTGCCTATCAGATTTCTAGCTATTATCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR GCA 90 bp CGAGTTTCTGATTCAGTAGTTCTCCTGGGGCGGGGGCTAAGAATTTaGATTTCAAACAAGTTTCCAGGTGATATTTATGCTGCTGGCCCA +
Preference number: 1 (lower is better)
Translates to: RVSDSVVLLGRGLRI*ISNKFPGDIYAAGP
Trigger: TGGGCCAGCAGCATAAATATCACCTGGAAACTTGTTTGAAATGCAAATTCTTAGCCCCCGCCCCAGGAGAACTACTGAATCAGAAACTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR GCA 90 bp GACAACAGGAGTGTGAAGATCCATCCGAAAAGGGTGAGGTACCACTaGTTGAAATATGAATCCCCTAGCCAGTGGTTCTCAAACTTTAGC +
Preference number: 1 (lower is better)
Translates to: DNRSVKIHPKRVRYH*LKYESPSQWFSNFS
Trigger: GCTAAAGTTTGAGAACCACTGGCTAGGGGATTCATATTTCAAGCAGTGGTACCTCACCCTTTTCGGATGGATCTTCACACTCCTGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR GCA 90 bp TCTTGCTTGTGTCAAATCTTACTAGAAAAACCTAGTTCTCTCTTATaGCCTGGGGACTCTGATGTTCCTGCTGCCCTTGCCCATAGGGTA +
Preference number: 1 (lower is better)
Translates to: SCLCQILLEKPSSLL*PGDSDVPAALAHRV
Trigger: TACCCTATGGGCAAGGGCAGCAGGAACATCAGAGTCCCCAGGGCATAAGAGAGAACTAGGTTTTTCTAGTAAGATTTGACACAAGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CCA 90 bp CACAGCCTGAATCTGTCAGAATCTTCTAAGCAGCAGAATGCATTTTaGGCACCATGGCTTCATTGGTTACAACCTCTACCTAGTAAGCAG +
Preference number: 1 (lower is better)
Translates to: HSLNLSESSKQQNAF*APWLHWLQPLPSKQ
Trigger: CTGCTTACTAGGTAGAGGTTGTAACCAATGAAGCCATGGTGCCCAAAATGCATTCTGCTGCTTAGAAGATTCTGACAGATTCAGGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR GCA 90 bp CACCCAGTTTTTCCTGCAAAAGGCACAGTCGCTAAACTAAATTGGTaGAATTCACTTCCTCTTGCCTCTCTGGTTCATTCCACCAATTGT +
Preference number: 1 (lower is better)
Translates to: HPVFPAKGTVAKLNW*NSLPLASLVHSTNC
Trigger: ACAATTGGTGGAATGAACCAGAGAGGCAAGAGGAAGTGAATTGCACCAATTTAGTTTAGCGACTGTGCCTTTTGCAGGAAAAACTGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR GCA 90 bp TCTGAGAAGCTAGGGCAAGACCTGCCTTACAAAGACCAGCCATTTTaGCTTATTCATAGGATCATAAGCAAGAGAACTGCATTCCAGGAA +
Preference number: 1 (lower is better)
Translates to: SEKLGQDLPYKDQPF*LIHRIISKRTAFQE
Trigger: TTCCTGGAATGCAGTTCTCTTGCTTATGATCCTATGAATAAGGCAAAATGGCTGGTCTTTGTAAGGCAGGTCTTGCCCTAGCTTCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR TCA 90 bp TTTGCCCAAAGAACTCTATTTTTATGTGCTATCTCACAGAACTGGTaGGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGAT +
Preference number: 1 (lower is better)
Translates to: FAQRTLFLCAISQNW*EMLWPLLGPHLSRD
Trigger: ATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAGCACATAAAAATAGAGTTCTTTGGGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR TCA 90 bp AATTGGAAGGAAAACCAACCAGAAAGCTTATTACCCTGCAGCAGCTaGAAAGCTAAGCCACAGCCATTTTCCCTAAAGTTCTGTTTCTGG +
Preference number: 1 (lower is better)
Translates to: NWKENQPESLLPCSS*KAKPQPFSLKFCFW
Trigger: CCAGAAACAGAACTTTAGGGAAAATGGCTGTGGCTTAGCTTTTCAGCTGCTGCAGGGTAATAAGCTTTCTGGTTGGTTTTCCTTCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR GCA 90 bp AACACAGCCCCTAGAAAACCTAGCTTGTACAGTTTGCACATAGCATaGTGTCTTCAAAGACCCTGCACACAAATACACAGACACATAAAG +
Preference number: 1 (lower is better)
Translates to: NTAPRKPSLYSLHIA*CLQRPCTQIHRHIK
Trigger: CTTTATGTGTCTGTGTATTTGTGTGCAGGGTCTTTGAAGACAGCATGCTATGTGCAAACTGTACAAGCTAGGTTTTCTAGGGGCTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR CCA 90 bp ATTCACCCAGTTTTTCCTGCAAAAGGCACAGTCGCTAAACTAAATTaGTGCAATTCACTTCCTCTTGCCTCTCTGGTTCATTCCACCAAT +
Preference number: 1 (lower is better)
Translates to: IHPVFPAKGTVAKLN*CNSLPLASLVHSTN
Trigger: ATTGGTGGAATGAACCAGAGAGGCAAGAGGAAGTGAATTGCACCAATTTAGTTTAGCGACTGTGCCTTTTGCAGGAAAAACTGGGTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR CCA 90 bp AATCTGTCAGAATCTTCTAAGCAGCAGAATGCATTTTGGGCACCATaGCTTCATTGGTTACAACCTCTACCTAGTAAGCAGAGTCTGGAT +
Preference number: 1 (lower is better)
Translates to: NLSESSKQQNAFWAP*LHWLQPLPSKQSLD
Trigger: ATCCAGACTCTGCTTACTAGGTAGAGGTTGTAACCAATGAAGCCATGGTGCCCAAAATGCATTCTGCTGCTTAGAAGATTCTGACAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR TCA 90 bp TCTGGTTTCTGTCAGATTCAACAGGTCTGTACCCAAGACAGGTTCTaGACCATTGCTTATGCAGAGCTTTTAGTATTAAAGAGGGAGAGT +
Preference number: 1 (lower is better)
Translates to: SGFCQIQQVCTQDRF*TIAYAELLVLKRES
Trigger: ACTCTCCCTCTTTAATACTAAAAGCTCTGCATAAGCAATGGTTCAGAACCTGTCTTGGGTACAGACCTGTTGAATCTGACAGAAACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR TCA 90 bp ATAGCCAAGCCAAGAATTTGGAGGATGAGAGTGGTAAGTATGAATTaGCCCCTGCTTAGTAGGCTTAAAGCTGATAGAAAAGAAACTGGA +
Preference number: 1 (lower is better)
Translates to: IAKPRIWRMRVVSMN*PLLSRLKADRKETG
Trigger: TCCAGTTTCTTTTCTATCAGCTTTAAGCCTACTAAGCAGGGGTCAATTCATACTTACCACTCTCATCCTCCAAATTCTTGGCTTGGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CCA 90 bp GAATCTTCTAAGCAGCAGAATGCATTTTGGGCACCATGGCTTCATTaGTTACAACCTCTACCTAGTAAGCAGAGTCTGGATTTAAATCTT +
Preference number: 1 (lower is better)
Translates to: ESSKQQNAFWAPWLH*LQPLPSKQSLDLNL
Trigger: AAGATTTAAATCCAGACTCTGCTTACTAGGTAGAGGTTGTAACCAATGAAGCCATGGTGCCCAAAATGCATTCTGCTGCTTAGAAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR TCA 90 bp ATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATTTGTaGGGAGCTGGATTTGTCAGCATGTCAGATCTTTTTGAAAACCAG +
Preference number: 1 (lower is better)
Translates to: IVRNITSHKSFKQDL*GAGFVSMSDLFENQ
Trigger: CTGGTTTTCAAAAAGATCTGACATGCTGACAAATCCAGCTCCTCACAAATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR CCA 90 bp GGGCTTCACTTTCTATCCCTACAATTACTCAAACAGATAAAAGGCTaGATGTTAACATGTAGTTATAAGGGGCGTGATCTAATAGTAAGG +
Preference number: 1 (lower is better)
Translates to: GLHFLSLQLLKQIKG*MLTCSYKGRDLIVR
Trigger: CCTTACTATTAGATCACGCCCCTTATAACTACATGTTAACATCCAGCCTTTTATCTGTTTGAGTAATTGTAGGGATAGAAAGTGAAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGCCTCATAGGTGCGCCTaGGAGAGGAACTGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEPHRCA*ERNWRR
Trigger: CCTCCTCCAGTTCCTCTCCCAGGCGCACCTATGAGG...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCCCCACTCCCATTCAGTaGATGCATCCTAATTCAGAG +
Preference number: 2 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGPTPIQ*MHPNSE
Trigger: CTCTGAATTAGGATGCATGCACTGAATGGGAGTGGG...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCCCTAGTTCTCTCTTATaGCCTGGGGACTCTGATGTT +
Preference number: 2 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGPSSLL*PGDSDV
Trigger: AACATCAGAGTCCCCAGGGCATAAGAGAGAACTAGG...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCCGGCAGCCCTGGCAGTaGCTCCTGGTAGCACCGGCT +
Preference number: 2 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSRQPWQ*LLVAPA
Trigger: AGCCGGTGCTACCAGGAGTCACTGCCAGGGCTGCCG...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCCGGCAGCCCTGGCAGTaGCTCCTGGTAGCACCGGCT +
Preference number: 2 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSRQPWQ*LLVAPA
Trigger: AGCCGGTGCTACCAGGAGTCACTGCCAGGGCTGCCG...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTTGGGGTCAGGGCTTATaGTTCTGGCCACTGGGGTTC +
Preference number: 2 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFWGQGL*FWPLGF
Trigger: GAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCA...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGGACTCTGAGGAGCTGTaGTTCACCCAGTTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEDSEEL*FTQFFL
Trigger: CAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTC...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCAGATTTGTGAGGAGCTaGATTTGTCAGCATGTCAGA +
Preference number: 2 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGRFVRS*ICQHVR
Trigger: TCTGACATGCTGACAAATCCAGCTCCTCACAAATCT...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGGGGTTCTTAAGGGCTTaGCATGGTAGGCCTTACTCT +
Preference number: 2 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEGFLRA*HGRPYS
Trigger: AGAGTAAGGCCTACCATGCCAAGCCCTTAAGAACCC...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CAA 90 bp TCTGTCCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATaGGAAGCCCCAGCCCCAATGAATCACAGGAGCTTGGTAGTTGCC +
Preference number: 2 (lower is better)
Translates to: SVLSDFWTQVSSVPI*EAPAPMNHRSLVVA
Trigger: GGCAACTACCAAGCTCCTGTGATTCATTGGGGCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGTGGGGTCAGGGCTTATaGTTCTGGCCACTGGGGTTC +
Preference number: 2 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRWGQGL*FWPLGF
Trigger: GAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCA...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCGCATTCCAGGAAGAATaGAGGAAGAAGGAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSAFQEE*RKKEGC
Trigger: GCAGCCTTCCTTCTTCCTTCATTCTTCCTGGAATGC...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGTCCTTCCCGAGTTTCTaGTTCAGTAGTTCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRSFPSF*FSSSPG
Trigger: CCCAGGAGAACTACTGAATCAGAAACTCGGGAAGGA...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGAGCAAGGGTCACATTTaGTCTCCCAGGCCTGAAATT +
Preference number: 2 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEESKGHI*SPRPEI
Trigger: AATTTCAGGCCTGGGAGATCAAATGTGACCCTTGCT...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCCAAACACGTAATTCCTaGCCTAATTTTCCAGCACTT +
Preference number: 2 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGQTRNS*PNFPAL
Trigger: AAGTGCTGGAAAATTAGGGCAGGAATTACGTGTTTG...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCTGCTCTGGCCATTGCTaGGACCTCATCTTTCTAGGG +
Preference number: 2 (lower is better)
Translates to: WISAINCQYHSPLENSSGCSGHC*DLIFLG
Trigger: CCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCA...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCAGAGATAAACTAGAATaGAAGAAGGAATGGGGGTTG +
Preference number: 2 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGRDKLE*KKEWGL
Trigger: CAACCCCCATTCCTTCTTCCATTCTAGTTTATCTCT...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CAA 90 bp CTAGTTCTCTCTTATGCCCTGGGGACTCTGATGTTCCTGCTGCCCTaGCCCATAGGGTATGCCAAATCATGGTTAGAAATCCCTTCCATG +
Preference number: 2 (lower is better)
Translates to: LVLSYALGTLMFLLP*PIGYAKSWLEIPSM
Trigger: CATGGAAGGGATTTCTAACCATGATTTGGCATACCCTATGGGCAAGGGCAGCAGGAACATCAGAGTCCCCAGGGCATAAGAGAGAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGCGGCAGCCCTGGCAGTaGCTCCTGGTAGCACCGGCT +
Preference number: 2 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLRQPWQ*LLVAPA
Trigger: AGCCGGTGCTACCAGGAGTCACTGCCAGGGCTGCCG...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACGTACCACTCTCCTCTTaGGAACAGCTCAGGCTGAAT +
Preference number: 2 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDVPLSS*EQLRLN
Trigger: ATTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTAC...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAAATGCTCCTGTTTCTaGGAAGCTAGGGCAAGACCT +
Preference number: 2 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRKCSCF*EARARP
Trigger: AGGTCTTGCCCTAGCTTCTCAGAAACAGGAGCATTT...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCGGAACTCCCTTTCTTTaGAGGCAGTTTAGGGATTCC +
Preference number: 2 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSGTPFL*RQFRDS
Trigger: GGAATCCCTAAACTGCCTTCAAAGAAAGGGAGTTCC...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCAGAACTGGTGAGAAATaGTCTGGCCATTGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: WISAINCQYHSPLENSSGRTGEK*SGHCWD
Trigger: GTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCT...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCCAGGAGCTTGGTAGTTaGCCCACCATAGTTTCTGAT +
Preference number: 2 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSQELGS*PTIVSD
Trigger: ATCAGAAACTATGGTGGGGCAACTACCAAGCTCCTG...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAATATGATTCTGGCCACTaGGGTTCAGGAGAACGGCAG +
Preference number: 2 (lower is better)
Translates to: LAQRPNFESHSLVWLTREYDSGH*GSGERQ
Trigger: CTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATA...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCGTCGCTAAACTAAATTaGTGCAATTCACTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGVAKLN*CNSLPL
Trigger: AAGAGGAAGTGAATTGCACCAATTTAGTTTAGCGAC...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACCCTCATAGGTGCGCCTaGGAGAGGAACTGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: RTNALGRACYCSVRTKQNPHRCA*ERNWRR
Trigger: CCTCCTCCAGTTCCTCTCCCAGGCGCACCTATGAGG...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGGGGGCTCTGGATGCCTaGTCACTATCTCTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: SPSSFTELRVEEDLATKGGALDA*SLSLVS
Trigger: GGAAACAAGAGATAGTGATCAGGCATCCAGAGCCCC...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
49% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGTTGAGTCCAGGACTCTaGGGAGCTGTGATTCACCCA +
Preference number: 2 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRLSPGL*GAVIHP
Trigger: TGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAA...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGCCATCCTTATACCACTaGTGCCTCTGGTACCTTAAT +
Preference number: 2 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRPSLYH*CLWYLN
Trigger: ATTAAGGTACCAGAGGCATCAGTGGTATAAGGATGG...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAAATGCTCTGGCCATTaGTGGGACCTCATCTTTCTA +
Preference number: 2 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRKCSGH*WDLIFL
Trigger: TAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTT...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCATATTTAGTGACCCTTaGCTTCTAATTCTTGACACA +
Preference number: 2 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGIFSDP*LLILDT
Trigger: TGTGTCAAGAATTAGAAGGCAAGGGTCACTAAATAT...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGTGCTCTGGCCATTGCTaGGACCTCATCTTTCTAGGG +
Preference number: 2 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRCSGHC*DLIFLG
Trigger: CCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCA...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGTCCATGGCCCCTCGTTaGTCTCTAATCCAATTTTTA +
Preference number: 2 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEESMAPR*SLIQFL
Trigger: TAAAAATTGGATTAGAGACCAACGAGGGGCCATGGA...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CAA 90 bp AGAAGGCCCTTAGACTCCATGATGCCTTTCAGCTGGGTGCTATACTaGCACCTAACTCTGGGGGCTTCACTTTCTATCCCTACAATTACT +
Preference number: 2 (lower is better)
Translates to: RRPLDSMMPFSWVLY*HLTLGASLSIPTIT
Trigger: AGTAATTGTAGGGATAGAAAGTGAAGCCCCCAGAGTTAGGTGCAAGTATAGCACCCAGCTGAAAGGCATCATGGAGTCTAAGGGCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR CAA 90 bp GAACCAATTCAGATAATAGCTAGAAATCTGATAGGCACGGAGCAGTaGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: EPIQIIARNLIGTEQ*GCMASGHSSPKFPG
Trigger: TCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCTCCGTGCCTATCAGATTTCTAGCTATTATCTGAATTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATGGGGCTCTGGATGCCTaGTCACTATCTCTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHGALDA*SLSLVS
Trigger: GGAAACAAGAGATAGTGATCAGGCATCCAGAGCCCC...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGCTTAGCCTTGTAGTGTaGTCTCTCAGCTGGATATAT +
Preference number: 2 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRLSLVV*SLSWIY
Trigger: ATATATCCAGCTGAGAGATCACACTACAAGGCTAAG...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCAAATGCTCTGGCCATTaGTGGGACCTCATCTTTCTA +
Preference number: 2 (lower is better)
Translates to: WISAINCQYHSPLENSSGKCSGH*WDLIFL
Trigger: TAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTT...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAAAGGGCAAAAGCAATCTaGAGCCCAGAGATTCAAACC +
Preference number: 2 (lower is better)
Translates to: LAQRPNFESHSLVWLTRERAKAI*SPEIQT
Trigger: GGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCT...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACTGCTCTGGCCATTGCTaGGACCTCATCTTTCTAGGG +
Preference number: 2 (lower is better)
Translates to: QSEWISAINCQYHSPLENCSGHC*DLIFLG
Trigger: CCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCA...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR CAA 90 bp AGAACTGGCCTTCTGGCCTTTGTAGGTCTGAGTCAGGACCTGCCCTaGATGGAAATAGGAAACAGTGATTTGATTGCAGGAATGTTGGAA +
Preference number: 2 (lower is better)
Translates to: RTGLLAFVGLSQDLP*MEIGNSDLIAGMLE
Trigger: TTCCAACATTCCTGCAATCAAATCACTGTTTCCTATTTCCATCAAGGGCAGGTCCTGACTCAGACCTACAAAGGCCAGAAGGCCAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTTTACCCTGCAGCAGCTaGAAAGCTAAGCCACAGCCA +
Preference number: 2 (lower is better)
Translates to: ILSYSLGHLLILILKCSCLPCSS*KAKPQP
Trigger: TGGCTGTGGCTTAGCTTTTCAGCTGCTGCAGGGTAA...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGGGAACTCCCTTTCTTTaGAGGCAGTTTAGGGATTCC +
Preference number: 2 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRGTPFL*RQFRDS
Trigger: GGAATCCCTAAACTGCCTTCAAAGAAAGGGAGTTCC...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCTCAGCCCATGTAGGATaGATTGCTTCCCAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: WISAINCQYHSPLENSSGSAHVG*IASQKF
Trigger: AAACTTTTGGGAAGCAATGCATCCTACATGGGCTGA...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGAAAGGGGGCTCTGGATaGCTGATCACTATCTCTTGT +
Preference number: 2 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRKGGSG*LITISC
Trigger: ACAAGAGATAGTGATCAGGCATCCAGAGCCCCCTTT...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAAGTGATGGCAACAACTTaGAAACACGTAATTCCTGCC +
Preference number: 2 (lower is better)
Translates to: LAQRPNFESHSLVWLTREVMATT*KHVIPA
Trigger: GGCAGGAATTACGTGTTTGCAAGTTGTTGCCATCAC...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGTCCCTAACCCCGAACTaGTCTTACATACAAGATAAT +
Preference number: 2 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRSLTPN*SYIQDN
Trigger: ATTATCTTGTATGTAAGAGCAGTTCGGGGTTAGGGA...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCCAATTCACTTCCTCTTaGCTCTCTGGTTCATTCCAC +
Preference number: 2 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCQFTSS*LSGSFH
Trigger: GTGGAATGAACCAGAGAGGCAAGAGGAAGTGAATTG...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGACACCTTTCCAGAATTaGAAGGAAAACCAACCAGAA +
Preference number: 2 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRTPFQN*KENQPE
Trigger: TTCTGGTTGGTTTTCCTTCCAATTCTGGAAAGGTGT...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCTTCCTCTTGCCTCTCTaGTTCATTCCACCAATTGTG +
Preference number: 2 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCFLLPL*FIPPIV
Trigger: CACAATTGGTGGAATGAACCAGAGAGGCAAGAGGAA...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR CAA 90 bp AACAGGAGTGTGAAGATCCATCCGAAAAGGGTGAGGTACCACTGCTaGAAATATGAATCCCCTAGCCAGTGGTTCTCAAACTTTAGCTTG +
Preference number: 2 (lower is better)
Translates to: NRSVKIHPKRVRYHC*KYESPSQWFSNFSL
Trigger: CAAGCTAAAGTTTGAGAACCACTGGCTAGGGGATTCATATTTCAAGCAGTGGTACCTCACCCTTTTCGGATGGATCTTCACACTCCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGGAAAATATCCCACTTTaGTCCTCTTCCTCCCTAACC +
Preference number: 2 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRENIPL*SSSSLT
Trigger: GGTTAGGGAGGAAGAGGAGCAAAGTGGGATATTTTC...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGGAAAATATCCCACTTTaGTCCTCTTCCTCCCTAACC +
Preference number: 2 (lower is better)
Translates to: SPSSFTELRVEEDLATKGENIPL*SSSSLT
Trigger: GGTTAGGGAGGAAGAGGAGCAAAGTGGGATATTTTC...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGATGATGCCTTTCAGCTaGGTGCTATACTTGCACCTA +
Preference number: 2 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRMMPFS*VLYLHL
Trigger: TAGGTGCAAGTATAGCACCCAGCTGAAAGGCATCAT...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCGTACCACTCTCCTCTTaGGAACAGCTCAGGCTGAAT +
Preference number: 2 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSVPLSS*EQLRLN
Trigger: ATTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTAC...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATGCATTCCAGGAAGAATaGAGGAAGAAGGAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDAFQEE*RKKEGC
Trigger: GCAGCCTTCCTTCTTCCTTCATTCTTCCTGGAATGC...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAAACCTCTTTGGTTCTCTaGAGCCATAACATTACTTTG +
Preference number: 2 (lower is better)
Translates to: LAQRPNFESHSLVWLTRETSLVL*SHNITL
Trigger: CAAAGTAATGTTATGGCTTCAGAGAACCAAAGAGGT...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGCCAAAGACCAAATTTTaGGAGCCACAGTTTGGTATG +
Preference number: 2 (lower is better)
Translates to: SPSSFTELRVEEDLATKGPKTKF*EPQFGM
Trigger: CATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGG...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCTTCAGTTGGGTCTACTaGAGAAATTTTCAGAGCCTT +
Preference number: 2 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCFSWVY*RNFQSL
Trigger: AAGGCTCTGAAAATTTCTGCAGTAGACCCAACTGAA...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTAAAGGGGGCTCTGGATaGCTGATCACTATCTCTTGT +
Preference number: 2 (lower is better)
Translates to: ILSYSLGHLLILILKCSCKGGSG*LITISC
Trigger: ACAAGAGATAGTGATCAGGCATCCAGAGCCCCCTTT...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTAGGGCAAAAGCAATCTaGAGCCCAGAGATTCAAACC +
Preference number: 2 (lower is better)
Translates to: ILSYSLGHLLILILKCSCRAKAI*SPEIQT
Trigger: GGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCT...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAAGCTAAACTAAATTGGTaGAATTCACTTCCTCTTGCC +
Preference number: 2 (lower is better)
Translates to: LAQRPNFESHSLVWLTREAKLNW*NSLPLA
Trigger: GGCAAGAGGAAGTGAATTGCACCAATTTAGTTTAGC...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTTATGATTCTGGCCACTaGGGTTCAGGAGAACGGCAG +
Preference number: 2 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTYDSGH*GSGERQ
Trigger: CTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATA...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR CAA 90 bp GCCAATACATCTTTTATTCAACTGACAGGGACCATAAGTCCCCTGTaGGGTAACCCAAGGAAGTTCACAGTTCATCAGAAGGAACCAATT +
Preference number: 2 (lower is better)
Translates to: ANTSFIQLTGTISPL*GNPRKFTVHQKEPI
Trigger: AATTGGTTCCTTCTGATGAACTGTGAACTTCCTTGGGTTACCCAACAGGGGACTTATGGTCCCTGTCAGTTGAATAAAAGATGTATTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGTACCACTCTCCTCTTaGGAACAGCTCAGGCTGAAT +
Preference number: 2 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTVPLSS*EQLRLN
Trigger: ATTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTAC...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCGTACCACTCTCCTCTTaGGAACAGCTCAGGCTGAAT +
Preference number: 2 (lower is better)
Translates to: RETMTNSLANDARILMQAVPLSS*EQLRLN
Trigger: ATTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTAC...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATAGAACTGGTGAGAAATaGTCTGGCCATTGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNRTGEK*SGHCWD
Trigger: GTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCT...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACTCAGCCCATGTAGGATaGATTGCTTCCCAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: QSEWISAINCQYHSPLENSAHVG*IASQKF
Trigger: AAACTTTTGGGAAGCAATGCATCCTACATGGGCTGA...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACAGTTTGCACATAGCATaGTGTCTTCAAAGACCCTGC +
Preference number: 2 (lower is better)
Translates to: RTNALGRACYCSVRTKQNSLHIA*CLQRPC
Trigger: GCAGGGTCTTTGAAGACAGCATGCTATGTGCAAACT...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAATACAAAGTTTCTATGTaGCTCTTGCCTGAAATCAAC +
Preference number: 2 (lower is better)
Translates to: LAQRPNFESHSLVWLTREYKVSM*LLPEIN
Trigger: GTTGATTTCAGGCAAGAGGCACATAGAAACTTTGTA...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTGTGATGGCAACAACTTaGAAACACGTAATTCCTGCC +
Preference number: 2 (lower is better)
Translates to: ILSYSLGHLLILILKCSCVMATT*KHVIPA
Trigger: GGCAGGAATTACGTGTTTGCAAGTTGTTGCCATCAC...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCTTACCCTGCAGCAGCTaGAAAGCTAAGCCACAGCCA +
Preference number: 2 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFLPCSS*KAKPQP
Trigger: TGGCTGTGGCTTAGCTTTTCAGCTGCTGCAGGGTAA...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCAAATGCTCTGGCCATTaGTGGGACCTCATCTTTCTA +
Preference number: 2 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSKCSGH*WDLIFL
Trigger: TAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTT...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACTCAGCCCATGTAGGATaGATTGCTTCCCAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: RTNALGRACYCSVRTKQNSAHVG*IASQKF
Trigger: AAACTTTTGGGAAGCAATGCATCCTACATGGGCTGA...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAAAAAGACCAGCCATTTTaGCTTATTCATAGGATCATA +
Preference number: 2 (lower is better)
Translates to: LAQRPNFESHSLVWLTREKDQPF*LIHRII
Trigger: TATGATCCTATGAATAAGGCAAAATGGCTGGTCTTT...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CAA 90 bp AGGCTGAATATCAGCCCATGTAGGATGCATTGCTTCCCAAAAGTTTaGCCCAAAGAACTCTATTTTTATGTGCTATCTCACAGAACTGGT +
Preference number: 2 (lower is better)
Translates to: RLNISPCRMHCFPKV*PKELYFYVLSHRTG
Trigger: ACCAGTTCTGTGAGATAGCACATAAAAATAGAGTTCTTTGGGCAAAACTTTTGGGAAGCAATGCATCCTACATGGGCTGATATTCAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR CAA 90 bp CTGCCCTTGATGGAAATAGGAAACAGTGATTTGATTGCAGGAATGTaGGAAAGGGAGGAATTTTGTCCCAAATTATCACCTCTTTGGTTC +
Preference number: 2 (lower is better)
Translates to: LPLMEIGNSDLIAGM*EREEFCPKLSPLWF
Trigger: GAACCAAAGAGGTGATAATTTGGGACAAAATTCCTCCCTTTCCAACATTCCTGCAATCAAATCACTGTTTCCTATTTCCATCAAGGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATTATGTGCCTCTTGCCTaGAATCAACAAGAAACAGCT +
Preference number: 2 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDYVPLA*NQQETA
Trigger: AGCTGTTTCTTGTTGATTTCAGGCAAGAGGCACATA...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGTGGGGTCTAATCTTTTaGCCTTGGAGAAGACCTGTG +
Preference number: 2 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLWGLIF*PWRRPV
Trigger: CACAGGTCTTCTCCAAGGTCAAAAGATTAGACCCCA...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCATTTCAGCCATAAACTaGCAGTACCACTCTCCTCTT +
Preference number: 2 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSISAIN*QYHSPL
Trigger: AAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAAT...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGACATTTAGGAAACACTaGCTTAATAGAACCTTCAGT +
Preference number: 2 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRTFRKH*LNRTFS
Trigger: ACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCCAAACACGTAATTCCTaGCCTAATTTTCCAGCACTT +
Preference number: 2 (lower is better)
Translates to: NPILSYSLGHLLILILKCQTRNS*PNFPAL
Trigger: AAGTGCTGGAAAATTAGGGCAGGAATTACGTGTTTG...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGATATTTAGTGACCCTTaGCTTCTAATTCTTGACACA +
Preference number: 2 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRIFSDP*LLILDT
Trigger: TGTGTCAAGAATTAGAAGGCAAGGGTCACTAAATAT...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCACACCTTTCCAGAATTaGAAGGAAAACCAACCAGAA +
Preference number: 2 (lower is better)
Translates to: NPILSYSLGHLLILILKCTPFQN*KENQPE
Trigger: TTCTGGTTGGTTTTCCTTCCAATTCTGGAAAGGTGT...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATTTAAGGGTCTTAGTGTaGACACCTTTCCAGAATTGG +
Preference number: 2 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDLRVLV*TPFQNW
Trigger: CCAATTCTGGAAAGGTGTCCACACTAAGACCCTTAA...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCTTTGTCCAAGAGAGGTaGTGTTGGACCGAGGTAGAG +
Preference number: 2 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFFVQER*CWTEVE
Trigger: CTCTACCTCGGTCCAACACCACCTCTCTTGGACAAA...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACATACTCAGAATAGGGTaGAGGTACCAGATGGAAAAA +
Preference number: 2 (lower is better)
Translates to: RTNALGRACYCSVRTKQNILRIG*RYQMEK
Trigger: TTTTTCCATCTGGTACCTCCACCCTATTCTGAGTAT...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTCCCTAACCCCGAACTaGTCTTACATACAAGATAAT +
Preference number: 2 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSSLTPN*SYIQDN
Trigger: ATTATCTTGTATGTAAGAGCAGTTCGGGGTTAGGGA...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCCATAAGCAAGAGAACTaGATTCCAGGAAGAATGAAG +
Preference number: 2 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSHKQEN*IPGRMK
Trigger: CTTCATTCTTCCTGGAATGCAGTTCTCTTGCTTATG...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCAAATTATCACCTCTTTaGTTCTCTGAAGCCATAACA +
Preference number: 2 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVKLSPL*FSEAIT
Trigger: TGTTATGGCTTCAGAGAACCAAAGAGGTGATAATTT...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCAGTTTGCACATAGCATaGTGTCTTCAAAGACCCTGC +
Preference number: 2 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFSLHIA*CLQRPC
Trigger: GCAGGGTCTTTGAAGACAGCATGCTATGTGCAAACT...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATGTCGCTAAACTAAATTaGTGCAATTCACTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDVAKLN*CNSLPL
Trigger: AAGAGGAAGTGAATTGCACCAATTTAGTTTAGCGAC...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR TCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGACTTTGGAAGTTACCTaGTTGGAAGAAGAACCTCTA +
Preference number: 2 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLTLEVT*LEEEPL
Trigger: TAGAGGTTCTTCTTCCAATCAGGTAACTTCCAAAGT...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCTTTCTATGTGCCTCTTaGCTGAAATCAACAAGAAAC +
Preference number: 2 (lower is better)
Translates to: RETMTNSLANDARILMQAFLCAS*LKSTRN
Trigger: GTTTCTTGTTGATTTCAGGCAAGAGGCACATAGAAA...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGCATAAGCAAGAGAACTaGATTCCAGGAAGAATGAAG +
Preference number: 2 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLHKQEN*IPGRMK
Trigger: CTTCATTCTTCCTGGAATGCAGTTCTCTTGCTTATG...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCAATAGAACCTTCAGTTaGGTCTACTGCAGAAATTTT +
Preference number: 2 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSNRTFS*VYCRNF
Trigger: AAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATT...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR GCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCTTCAGTTGGGTCTACTaGAGAAATTTTCAGAGCCTT +
Preference number: 2 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFFSWVY*RNFQSL
Trigger: AAGGCTCTGAAAATTTCTGCAGTAGACCCAACTGAA...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCTCCTCAGTGCCCATATaGGAAGCCCCAGCCCCAATG +
Preference number: 3 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGSSVPI*EAPAPM
Trigger: CATTGGGGCTGGGGCTTCCAATATGGGCACTGAGGA...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCTGTAGAATTGAGAGTTaGGGCTGGGCGCGGTGGCTC +
Preference number: 3 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGCRIES*GWARWL
Trigger: GAGCCACCGCGCCCAGCCCAAACTCTCAATTCTACA...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CCA 72 bp TCCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTaGTGGCAAGAGACAAGGCAGGAAAGTGGTGGTGGG +
Preference number: 3 (lower is better)
Translates to: SPKFPGRGCPGA*WQETRQESGGG
Trigger: CCCACCACCACTTTCCTGCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGCCAAGAGAGGTGGTGTaGGACCGAGGTAGAGAAGAC +
Preference number: 3 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEPREVV*DRGRED
Trigger: GTCTTCTCTACCTCGGTCCAACACCACCTCTCTTGG...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR GCA 72 bp GACTCTGATGTTCCTGCTGCCCTTGCCCATAGGGTATaGCAAATCATGGTTAGAAATCCCTTCCATGGCCCC +
Preference number: 3 (lower is better)
Translates to: DSDVPAALAHRV*QIMVRNPFHGP
Trigger: GGGGCCATGGAAGGGATTTCTAACCATGATTTGGCATACCCTATGGGCAAGGGCAGCAGGAACATCAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CCA 72 bp TCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTaGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTT +
Preference number: 3 (lower is better)
Translates to: SHRTGEKCSGHC*DLIFLGMGSGL
Trigger: AAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR CCA 72 bp TTCCTGCTGCCCTTGCCCATAGGGTATGCCAAATCATaGTTAGAAATCCCTTCCATGGCCCCTCGTTGGTCT +
Preference number: 3 (lower is better)
Translates to: FLLPLPIGYAKS*LEIPSMAPRWS
Trigger: AGACCAACGAGGGGCCATGGAAGGGATTTCTAACCATGATTTGGCATACCCTATGGGCAAGGGCAGCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGTACCACTCTCCTCTaGAGAACAGCTCAGGCTGAA +
Preference number: 3 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRSTTLL*RTAQAE
Trigger: TTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTACT...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACGTGGGCCAGGGCTATTaGGGGGTATTAGATCATCTC +
Preference number: 3 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDVGQGY*GVLDHL
Trigger: GAGATGATCTAATACCCCCAAATAGCCCTGGCCCAC...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR CCA 72 bp TGTAGAAGGCCCTTAGACTCCATGATGCCTTTCAGCTaGGTGCTATACTTGCACCTAACTCTGGGGGCTTCA +
Preference number: 3 (lower is better)
Translates to: CRRPLDSMMPFS*VLYLHLTLGAS
Trigger: TGAAGCCCCCAGAGTTAGGTGCAAGTATAGCACCCAGCTGAAAGGCATCATGGAGTCTAAGGGCCTTCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACCACCGGCTGATAGACTaGACCATAGCTGTAGTGGAA +
Preference number: 3 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDHRLID*TIAVVE
Trigger: TTCCACTACAGCTATGGTCAAGTCTATCAGCCGGTG...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAAGTGGGCCAGGGCTATTaGGGGGTATTAGATCATCTC +
Preference number: 3 (lower is better)
Translates to: LAQRPNFESHSLVWLTREVGQGY*GVLDHL
Trigger: GAGATGATCTAATACCCCCAAATAGCCCTGGCCCAC...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCGCAATTCACTTCCTCTaGCCTCTCTGGTTCATTCCA +
Preference number: 3 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSAIHFL*PLWFIP
Trigger: TGGAATGAACCAGAGAGGCAAGAGGAAGTGAATTGC...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR TCA 72 bp TGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCTaGATATCAGCCCATGTAGGATGCATTGCTTCCCAA +
Preference number: 3 (lower is better)
Translates to: CQYHSPLENSSG*ISAHVGCIASQ
Trigger: TTGGGAAGCAATGCATCCTACATGGGCTGATATTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR GCA 72 bp ATAGCTAGAAATCTGATAGGCACGGAGCAGTTGGGCTaGATGGCAAGTGGGCATTCATCCCCAAAGTTTCCT +
Preference number: 3 (lower is better)
Translates to: IARNLIGTEQLG*MASGHSSPKFP
Trigger: AGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCTCCGTGCCTATCAGATTTCTAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCCCTAGCTTGTACAGTTaGCACATAGCATGCTGTCTT +
Preference number: 3 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSPSLYS*HIACCL
Trigger: AAGACAGCATGCTATGTGCAAACTGTACAAGCTAGG...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGCCTAGAAAACCTAGCTaGTACAGTTTGCACATAGCA +
Preference number: 3 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEPRKPS*YSLHIA
Trigger: TGCTATGTGCAAACTGTACAAGCTAGGTTTTCTAGG...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACTCCTCAGTGCCCATATaGGAAGCCCCAGCCCCAATG +
Preference number: 3 (lower is better)
Translates to: RTNALGRACYCSVRTKQNSSVPI*EAPAPM
Trigger: CATTGGGGCTGGGGCTTCCAATATGGGCACTGAGGA...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR TCA 72 bp GATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTaGGAACAGCTCAGGCTGAATATCAGCCCATGTAGG +
Preference number: 3 (lower is better)
Translates to: DFSHKLPVPLSS*EQLRLNISPCR
Trigger: CCTACATGGGCTGATATTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR GCA 72 bp GACTCCAACCAATCAGAATGGATTTCAGCCATAAACTaGCAGTACCACTCTCCTCTTGAGAACAGCTCAGGC +
Preference number: 3 (lower is better)
Translates to: DSNQSEWISAIN*QYHSPLENSSG
Trigger: GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTGGTTGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR GCA 72 bp CCTTACTCTACCTTTGTGCTAGATGCCCACTCCACCTaGCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGG +
Preference number: 3 (lower is better)
Translates to: PYSTFVLDAHST*LLLEEPVKRTR
Trigger: CCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGCATCTAGCACAAAGGTAGAGTAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGCACCGGCTGATAGACTaGACCATAGCTGTAGTGGAA +
Preference number: 3 (lower is better)
Translates to: SPSSFTELRVEEDLATKGHRLID*TIAVVE
Trigger: TTCCACTACAGCTATGGTCAAGTCTATCAGCCGGTG...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACAGCTGGGTGCTATACTaGCACCTAACTCTGGGGGCT +
Preference number: 3 (lower is better)
Translates to: RTNALGRACYCSVRTKQNSWVLY*HLTLGA
Trigger: AGCCCCCAGAGTTAGGTGCAAGTATAGCACCCAGCT...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATCACCGGCTGATAGACTaGACCATAGCTGTAGTGGAA +
Preference number: 3 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHHRLID*TIAVVE
Trigger: TTCCACTACAGCTATGGTCAAGTCTATCAGCCGGTG...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGGTGAAACATGAACATTaGAGGCTGATTCCCTGTGGG +
Preference number: 3 (lower is better)
Translates to: SPSSFTELRVEEDLATKGVKHEH*RLIPCG
Trigger: CCCACAGGGAATCAGCCTCAAATGTTCATGTTTCAC...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR GCA 72 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTaGCCCTTCTGTAGAAGGCCCTTAGACTCCATGATG +
Preference number: 3 (lower is better)
Translates to: RRQWYTRNNPKD*PFCRRPLDSMM
Trigger: CATCATGGAGTCTAAGGGCCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR GCA 72 bp AGTGTGAAGATCCATCCGAAAAGGGTGAGGTACCACTaGTTGAAATATGAATCCCCTAGCCAGTGGTTCTCA +
Preference number: 3 (lower is better)
Translates to: SVKIHPKRVRYH*LKYESPSQWFS
Trigger: TGAGAACCACTGGCTAGGGGATTCATATTTCAAGCAGTGGTACCTCACCCTTTTCGGATGGATCTTCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCCTATCTCTTGTTTCCTaGTTACTCTCTAACCCAGTG +
Preference number: 3 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCLSLVS*LLSNPV
Trigger: CACTGGGTTAGAGAGTAACAAGGAAACAAGAGATAG...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGAGTGATGGCAACAACTaGCAAACACGTAATTCCTGC +
Preference number: 3 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRSDGNN*QTRNSC
Trigger: GCAGGAATTACGTGTTTGCAAGTTGTTGCCATCACT...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAAAATAACTCTTGCCCCTaGATGAGGCAGTCAAATTCA +
Preference number: 3 (lower is better)
Translates to: LAQRPNFESHSLVWLTRENNSCP*MRQSNS
Trigger: TGAATTTGACTGCCTCATCAAGGGGCAAGAGTTATT...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCGAGTGGAAGAAGACCTaGCAACTAAGGGGAATGGAA +
Preference number: 3 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVEWKKT*QLRGME
Trigger: TTCCATTCCCCTTAGTTGCAAGGTCTTCTTCCACTC...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CCA 72 bp AAGCAGCAGAATGCATTTTGGGCACCATGGCTTCATTaGTTACAACCTCTACCTAGTAAGCAGAGTCTGGAT +
Preference number: 3 (lower is better)
Translates to: KQQNAFWAPWLH*LQPLPSKQSLD
Trigger: ATCCAGACTCTGCTTACTAGGTAGAGGTTGTAACCAATGAAGCCATGGTGCCCAAAATGCATTCTGCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCGAAATGCTCTGGCCATaGCTGGGACCTCATCTTTCT +
Preference number: 3 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSEMLWP*LGPHLS
Trigger: AGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTC...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCCCTGATCACTATCTCTaGTTTCCTTGTTACTCTCTA +
Preference number: 3 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCPDHYL*FPCYSL
Trigger: TAGAGAGTAACAAGGAAACAAGAGATAGTGATCAGG...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGGGTTCATTCCACCAATaGTGGTTGAGAAACACATCT +
Preference number: 3 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRGSFHQ*WLRNTS
Trigger: AGATGTGTTTCTCAACCACAATTGGTGGAATGAACC...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR TCA 72 bp GAAAACCAACCAGAAAGCTTATTACCCTGCAGCAGCTaGAAAGCTAAGCCACAGCCATTTTCCCTAAAGTTC +
Preference number: 3 (lower is better)
Translates to: ENQPESLLPCSS*KAKPQPFSLKF
Trigger: GAACTTTAGGGAAAATGGCTGTGGCTTAGCTTTTCAGCTGCTGCAGGGTAATAAGCTTTCTGGTTGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR TCA 72 bp GGTGATATTTATGCTGCTGGCCCAAAGACCAAATTTTaGGAGCCACAGTTTGGTATGGCTCACAAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: GDIYAAGPKTKF*EPQFGMAHKGK
Trigger: TTTTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAGCAGCATAAATATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR GCA 72 bp TTTCCTGCAAAAGGCACAGTCGCTAAACTAAATTGGTaGAATTCACTTCCTCTTGCCTCTCTGGTTCATTCC +
Preference number: 3 (lower is better)
Translates to: FPAKGTVAKLNW*NSLPLASLVHS
Trigger: GGAATGAACCAGAGAGGCAAGAGGAAGTGAATTGCACCAATTTAGTTTAGCGACTGTGCCTTTTGCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR CCA 72 bp AGGTACCACTGCTTGAAATATGAATCCCCTAGCCAGTaGTTCTCAAACTTTAGCTTGTATCACACATCCAGG +
Preference number: 3 (lower is better)
Translates to: RYHCLKYESPSQ*FSNFSLYHTSR
Trigger: CCTGGATGTGTGATACAAGCTAAAGTTTGAGAACCACTGGCTAGGGGATTCATATTTCAAGCAGTGGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CCA 72 bp GAATCTTCTAAGCAGCAGAATGCATTTTGGGCACCATaGCTTCATTGGTTACAACCTCTACCTAGTAAGCAG +
Preference number: 3 (lower is better)
Translates to: ESSKQQNAFWAP*LHWLQPLPSKQ
Trigger: CTGCTTACTAGGTAGAGGTTGTAACCAATGAAGCCATGGTGCCCAAAATGCATTCTGCTGCTTAGAAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CCA 72 bp AGAAACTGGACAGTAGGCAGAGGAATAGGTAGTAAGTaGACTCATGATGGAATAGAATTGGCCAGAAGCTTG +
Preference number: 3 (lower is better)
Translates to: RNWTVGRGIGSK*THDGIELARSL
Trigger: CAAGCTTCTGGCCAATTCTATTCCATCATGAGTCCACTTACTACCTATTCCTCTGCCTACTGTCCAGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATCACCGGCTGATAGACTaGACCATAGCTGTAGTGGAA +
Preference number: 3 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNHRLID*TIAVVE
Trigger: TTCCACTACAGCTATGGTCAAGTCTATCAGCCGGTG...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATCTATCTCTTGTTTCCTaGTTACTCTCTAACCCAGTG +
Preference number: 3 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHLSLVS*LLSNPV
Trigger: CACTGGGTTAGAGAGTAACAAGGAAACAAGAGATAG...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCGACACCTTTCCAGAATaGGAAGGAAAACCAACCAGA +
Preference number: 3 (lower is better)
Translates to: NPILSYSLGHLLILILKCDTFPE*EGKPTR
Trigger: TCTGGTTGGTTTTCCTTCCAATTCTGGAAAGGTGTC...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACGACACCTTTCCAGAATaGGAAGGAAAACCAACCAGA +
Preference number: 3 (lower is better)
Translates to: RTNALGRACYCSVRTKQNDTFPE*EGKPTR
Trigger: TCTGGTTGGTTTTCCTTCCAATTCTGGAAAGGTGTC...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCTTCCACAGATGGGCTTaGAACCTGCTAAATGTGTAT +
Preference number: 3 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVFHRWA*NLLNVY
Trigger: ATACACATTTAGCAGGTTCAAAGCCCATCTGTGGAA...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCCCAAGAGAGGTGGTGTaGGACCGAGGTAGAGAAGAC +
Preference number: 3 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFPREVV*DRGRED
Trigger: GTCTTCTCTACCTCGGTCCAACACCACCTCTCTTGG...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAATGCTTGTTTTATTTTTaGTCCAAGAGAGGTGGTGTT +
Preference number: 3 (lower is better)
Translates to: LAQRPNFESHSLVWLTRECLFYF*SKRGGV
Trigger: AACACCACCTCTCTTGGACAAAAAATAAAACAAGCA...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGTTCACTTTTCTGATATaGCCCAGCCCCACCCACTCC +
Preference number: 3 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLFTFLI*PSPTHS
Trigger: GGAGTGGGTGGGGCTGGGCAATATCAGAAAAGTGAA...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR GCA 72 bp CAGCTCAGGCTGAATATCAGCCCATGTAGGATGCATTaGTTCCCAAAAGTTTTGCCCAAAGAACTCTATTTT +
Preference number: 3 (lower is better)
Translates to: QLRLNISPCRMH*FPKVLPKELYF
Trigger: AAAATAGAGTTCTTTGGGCAAAACTTTTGGGAAGCAATGCATCCTACATGGGCTGATATTCAGCCTGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
3UTR GCA 72 bp CCTAGAAAACCTAGCTTGTACAGTTTGCACATAGCATaGTGTCTTCAAAGACCCTGCACACAAATACACAGA +
Preference number: 3 (lower is better)
Translates to: PRKPSLYSLHIA*CLQRPCTQIHR
Trigger: TCTGTGTATTTGTGTGCAGGGTCTTTGAAGACAGCATGCTATGTGCAAACTGTACAAGCTAGGTTTTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR CCA 72 bp GTTTTTCCTGCAAAAGGCACAGTCGCTAAACTAAATTaGTGCAATTCACTTCCTCTTGCCTCTCTGGTTCAT +
Preference number: 3 (lower is better)
Translates to: VFPAKGTVAKLN*CNSLPLASLVH
Trigger: ATGAACCAGAGAGGCAAGAGGAAGTGAATTGCACCAATTTAGTTTAGCGACTGTGCCTTTTGCAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR CCA 72 bp AATCTGTCAGAATCTTCTAAGCAGCAGAATGCATTTTaGGCACCATGGCTTCATTGGTTACAACCTCTACCT +
Preference number: 3 (lower is better)
Translates to: NLSESSKQQNAF*APWLHWLQPLP
Trigger: AGGTAGAGGTTGTAACCAATGAAGCCATGGTGCCCAAAATGCATTCTGCTGCTTAGAAGATTCTGACAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCGTTTCTATGTGCCTCTaGCCTGAAATCAACAAGAAA +
Preference number: 3 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVVSMCL*PEINKK
Trigger: TTTCTTGTTGATTTCAGGCAAGAGGCACATAGAAAC...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCAGTGATGGCAACAACTaGCAAACACGTAATTCCTGC +
Preference number: 3 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSSDGNN*QTRNSC
Trigger: GCAGGAATTACGTGTTTGCAAGTTGTTGCCATCACT...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTGGTTCATTCCACCAATaGTGGTTGAGAAACACATCT +
Preference number: 3 (lower is better)
Translates to: ILSYSLGHLLILILKCSCGSFHQ*WLRNTS
Trigger: AGATGTGTTTCTCAACCACAATTGGTGGAATGAACC...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR TCA 72 bp ACTCAGAATAGGGTGGAGGTACCAGATGGAAAAATGTaGCAGGTTCCTGAAGATGATATCCCTGTTTTACAT +
Preference number: 3 (lower is better)
Translates to: TQNRVEVPDGKM*QVPEDDIPVLH
Trigger: ATGTAAAACAGGGATATCATCTTCAGGAACCTGTCACATTTTTCCATCTGGTACCTCCACCCTATTCTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR GCA 72 bp CCTTGTAGTGTGATCTCTCAGCTGGATATATGTATGTaGAGGATGAAGGGAGTAGGAATAATGGGTAAAAAG +
Preference number: 3 (lower is better)
Translates to: PCSVISQLDICM*RMKGVGIMGKK
Trigger: CTTTTTACCCATTATTCCTACTCCCTTCATCCTGCACATACATATATCCAGCTGAGAGATCACACTACAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCAGTACCACTCTCCTCTaGAGAACAGCTCAGGCTGAA +
Preference number: 3 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFSTTLL*RTAQAE
Trigger: TTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTACT...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGCCTAGCTTGTACAGTTaGCACATAGCATGCTGTCTT +
Preference number: 3 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLPSLYS*HIACCL
Trigger: AAGACAGCATGCTATGTGCAAACTGTACAAGCTAGG...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR TCA 72 bp TGTCAGATTCAACAGGTCTGTACCCAAGACAGGTTCTaGACCATTGCTTATGCAGAGCTTTTAGTATTAAAG +
Preference number: 3 (lower is better)
Translates to: CQIQQVCTQDRF*TIAYAELLVLK
Trigger: CTTTAATACTAAAAGCTCTGCATAAGCAATGGTTCAGAACCTGTCTTGGGTACAGACCTGTTGAATCTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR TCA 72 bp GGGGCTAAGAATTTGCATTTCAAACAAGTTTCCAGGTaGTATTTATGCTGCTGGCCCAAAGACCAAATTTTG +
Preference number: 3 (lower is better)
Translates to: GAKNLHFKQVSR*YLCCWPKDQIL
Trigger: CAAAATTTGGTCTTTGGGCCAGCAGCATAAATATCACCTGGAAACTTGTTTGAAATGCAAATTCTTAGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR TCA 72 bp CCAAGAATTTGGAGGATGAGAGTGGTAAGTATGAATTaGCCCCTGCTTAGTAGGCTTAAAGCTGATAGAAAA +
Preference number: 3 (lower is better)
Translates to: PRIWRMRVVSMN*PLLSRLKADRK
Trigger: TTTTCTATCAGCTTTAAGCCTACTAAGCAGGGGTCAATTCATACTTACCACTCTCATCCTCCAAATTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR GCA 72 bp TTGGAGAGAACAAATGCCCTTGGAAGGGCATGTTATTaGTCAGTCAGAACAAAGCAAAACTCAAACAAACAA +
Preference number: 3 (lower is better)
Translates to: LERTNALGRACY*SVRTKQNSNKQ
Trigger: TTGTTTGTTTGAGTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCTCTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTGCTTCCCAAAAGTTTaGCCCAAAGAACTCTATTTT +
Preference number: 3 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSCFPKV*PKELYF
Trigger: AAAATAGAGTTCTTTGGGCAAAACTTTTGGGAAGCA...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATTGCTTCCCAAAAGTTTaGCCCAAAGAACTCTATTTT +
Preference number: 3 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDCFPKV*PKELYF
Trigger: AAAATAGAGTTCTTTGGGCAAAACTTTTGGGAAGCA...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGTCCCTGTTTTACATTTaGCCCAAAGAGAACACAGAG +
Preference number: 3 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLSLFYI*PKENTE
Trigger: CTCTGTGTTCTCTTTGGGCAAAATGTAAAACAGGGA...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGGGAAAGGGAGGAATTTaGTCCCAAATTATCACCTCT +
Preference number: 3 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLGKGGI*SQIITS
Trigger: AGAGGTGATAATTTGGGACAAAATTCCTCCCTTTCC...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGCCCAAAGACCAAATTTaGAGAGCCACAGTTTGGTAT +
Preference number: 3 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLPKDQI*RATVWY
Trigger: ATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGG...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR-3UTR CAA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCTTCCACAGATGGGCTTaGAACCTGCTAAATGTGTAT +
Preference number: 3 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFFHRWA*NLLNVY
Trigger: ATACACATTTAGCAGGTTCAAAGCCCATCTGTGGAA...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR TCA 72 bp GGAATTTTGTCCCAAATTATCACCTCTTTGGTTCTCTaGAGCCATAACATTACTTTGACAAGGGAAAAGTTT +
Preference number: 3 (lower is better)
Translates to: GILSQIITSLVL*SHNITLTREKF
Trigger: AAACTTTTCCCTTGTCAAAGTAATGTTATGGCTTCAGAGAACCAAAGAGGTGATAATTTGGGACAAAATTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCCGGCAGCCCTGGCAGTaGCTCCTGGTAGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPRQPWQ*LLVAPA
Trigger: AGCCGGTGCTACCAGGAGTCACTGCCAGGGCTGCCG...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCGGCGGGACGGGAGCCTaGTCAGGGGTAAGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: GSGLMILATGVQENGSPGGGTGA*SGVRLL
Trigger: AAGCAACCTTACCCCTGAGCAGGCTCCCGTCCCGCC...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS-3UTR CCA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCCATGGCCGCTCTTCCTaGCTTCCCCTTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: GSGLMILATGVQENGSPGHGRSS*LPLSTW
Trigger: CCAGGTGGAAAGGGGAAGCCAGGAAGAGCGGCCATG...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCTTTGTCCCTGGTGGGTaGGCAGGTGCCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSFVPGG*AGACPG
Trigger: ACCTGGACAGGCACCTGCTCACCCACCAGGGACAAA...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCGCACACGTGACACTTTaGCACTGGTGGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPAHVTL*HWWGTL
Trigger: CAGCGTGCCCCACCAGTGCCAAAGTGTCACGTGTGC...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCGTACTAGGCAGGGGGTaGAGTAGTGGTGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GSGLMILATGVQENGSPGVLGRG*SSGGVL
Trigger: CAGGACACCACCACTACTCCACCCCCTGCCTAGTAC...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACTGGGGTCAGGGCTTATaGTTCTGGCCACTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDWGQGL*FWPLGF
Trigger: GAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCA...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGGGAGCCCGCAGGGCCTaGCAGTTGCGATGGGCACGG +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRGARRA*QLRWAR
Trigger: CCGTGCCCATCGCAACTGTCAGGCCCTGCGGGCTCC...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS-3UTR CCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACGTGCTCCAGAGGTCCTaGTACTGTTCTCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDVLQRS*YCSPWP
Trigger: CGGCCATGGAGAACAGTACCAGGACCTCTGGAGCAC...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCCCAGTGTTCCCCTCCTaGGGAATTGCAGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPPVFPS*GIAGTQ
Trigger: CTGGGTTCCTGCAATTCCCCAGGAGGGGAACACTGG...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACGCACTCTCTGGTGGCTaGCCAGATGGGAGTTGCATC +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDALSGG*PDGSCI
Trigger: GATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGC...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACGCATGCACTCTCTGGTaGCTGGCCAGATGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDACTLW*LARWEL
Trigger: CAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGC...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACTCTGCATGCACTCTCTaGTGGCTGGCCAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDSACTL*WLARWE
Trigger: CTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGA...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCACACTTTGGCACTGGTaGGGCACGCTGCCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPTLWHW*GTLPFP
Trigger: AGGAAACGGCAGCGTGCCCCACCAGTGCCAAAGTGT...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGGCCACGGGTAGGGCATaGGCGGGACGGGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRATGRA*AGREPA
Trigger: AGCAGGCTCCCGTCCCGCCCATGCCCTACCCGTGGC...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS-3UTR GCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACTCCAGGATGATCCCATaGCCACTGCAGTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDSRMIP*PLQCGF
Trigger: GAACCCACACTGCAGTGGGCATGGGATCATCCTGGA...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301042.7
ENST00000544117.6
CDS-3UTR GCA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCGCATTCCTCTGGAGCTaGTGGGCATGGAATCCCAGC +
Preference number: 4 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGAFLWS*WAWNPS
Trigger: GCTGGGATTCCATGCCCAGCAGCTCCAGAGGAATGC...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCGCAGGATTTGCCTTCTaGATGCACTCTCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GSGLMILATGVQENGSPGAGFAF*MHSLVA
Trigger: AGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGC...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACTTTCCTGGAAGAGGATaGCCAGGTGCCTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDFPGRG*PGAWWQ
Trigger: TTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAA...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCGTGCTCCAGAGGTCCTaGTACTGTTCTCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGVLQRS*YCSPWP
Trigger: CGGCCATGGAGAACAGTACCAGGACCTCTGGAGCAC...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACCTCTCCTCTAAGTCCTaGGGGTCAGGGACCCATTGT +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDLSSKS*GSGTHC
Trigger: ACAATGGGTCCCTGACCCCCAGGACTTAGAGGAGAG...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCTCTGCATGCACTCTCTaGTGGCTGGCCAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGSACTL*WLARWE
Trigger: CTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGA...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCAGTGTCTCACAAGGTaGTGCCTTCGGCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSQCLTR*CLRPKL
Trigger: GAGCTTTGGCCGAAGGCACCACCTTGTGAGACACTG...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCTGCTCTGGCCATTGCTaGGACCTCATCTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: GSGLMILATGVQENGSPGCSGHC*DLIFLG
Trigger: CCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCA...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCAGTGTGTGTTTGTTaGTGCCTGGCAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSPVCVC*CLARWE
Trigger: TTCCCACCTTGCCAGGCATCAACAAACACACACTGG...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCGTACCACTCTCCTCTTaGGAACAGCTCAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GSGLMILATGVQENGSPGVPLSS*EQLRLN
Trigger: ATTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTAC...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACTTCCACCTGGGGCTCTaGTCCATCCAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDFHLGL*SIQLYI
Trigger: AATGTACAGCTGGATGGAGCAGAGCCCCAGGTGGAA...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTCCCAGCTCTCATCATaGTCCGGGTTCCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPSQLSS*SGFQRT
Trigger: TGTTCTCTGGAACCCGGAGCATGATGAGAGCTGGGA...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAACTGGTGGGGCACGCTaGCGTTTCCTTGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSTGGAR*RFLVPG
Trigger: CCCTGGCACAAGGAAACGGCAGCGTGCCCCACCAGT...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGCGCAGAGCCAGCACCTaGGCGGTTAAGGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILRRAST*AVKVVA
Trigger: GGCTACCACCTTAACCGCCCAGGTGCTGGCTCTGCG...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301042.7
ENST00000544117.6
CDS-3UTR CCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCCTCCTGAAGGGACTGTaGCTCCTCTTCAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPLLKGL*LLFKVT
Trigger: TGTGACCTTGAAGAGGAGCCACAGTCCCTTCAGGAG...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCGTGTTTGTTGATGCCTaGCAAGGTGGGAACCCCATA +
Preference number: 4 (lower is better)
Translates to: GSGLMILATGVQENGSPGVFVDA*QGGNPI
Trigger: TATGGGGTTCCCACCTTGCCAGGCATCAACAAACAC...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCATCCCCAAAGTTTCCTaGAAGAGGATGCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPIPKVS*KRMPRC
Trigger: GCACCTGGGCATCCTCTTCCAGGAAACTTTGGGGAT...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAAGGTTACCAGGCCCTGTaGTCCAGCCGCAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGEGYQAL*SSRKKC
Trigger: GCACTTCTTGCGGCTGGATCACAGGGCCTGGTAACC...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAATTTGTCCCTGGTGGGTaGGCAGGTGCCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGEFVPGG*AGACPG
Trigger: ACCTGGACAGGCACCTGCTCACCCACCAGGGACAAA...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATTTTGTCCCTGGTGGGTaGGCAGGTGCCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYFVPGG*AGACPG
Trigger: ACCTGGACAGGCACCTGCTCACCCACCAGGGACAAA...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCGGCAGCCCTGGCAGTaGCTCCTGGTAGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFRQPWQ*LLVAPA
Trigger: AGCCGGTGCTACCAGGAGTCACTGCCAGGGCTGCCG...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACGGACGGGGTGAAACATaGACATTTGAGGCTGATTCC +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDGRGET*TFEADS
Trigger: GGAATCAGCCTCAAATGTTCATGTTTCACCCCGTCC...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCACACTCAGAGCACCTaGTGGTCTTGTCATGTAGGT +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSHTQST*WSCHVG
Trigger: ACCTACATGACAAGACCAGCAGGTGCTCTGAGTGTG...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCCAACCTCTTGGCCTTTaGAGGATTTGCCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GSGLMILATGVQENGSPGQPLGL*RICLLH
Trigger: ATGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTG...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCTCTTCCCACATTCAGTaGACACGTGACACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GSGLMILATGVQENGSPGSSHIQ*TRDTLA
Trigger: TGCCAAAGTGTCACGTGTGCACTGAATGTGGGAAGA...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACTTTTCTTCACACATATaGGTAGCAAGGGACCCCCGG +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDFSSHI*VARDPR
Trigger: CCGGGGGTCCCTTGCTACCCATATGTGTGAAGAAAA...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301042.7
CDS-3UTR CCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATCTTCCCCTTTCCACCTaGGGCTCTGCTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYLPLST*GSAPSS
Trigger: GCTGGATGGAGCAGAGCCCCAGGTGGAAAGGGGAAG...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGACTTTGTCCCTGGTaGGTGAGCAGGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSGLCPW*VSRCLS
Trigger: GGACAGGCACCTGCTCACCCACCAGGGACAAAGTCC...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGGACTTTGTCCCTGGTaGGTGAGCAGGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYGLCPW*VSRCLS
Trigger: GGACAGGCACCTGCTCACCCACCAGGGACAAAGTCC...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCTTTGTCCAAGAGAGGTaGTGTTGGACCGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSFVQER*CWTEVE
Trigger: CTCTACCTCGGTCCAACACCACCTCTCTTGGACAAA...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCAAGAATGCTGCCTGTTaGGAAAAAGGAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPKNAAC*EKGGGG
Trigger: GCCACCACCTCCTTTTTCCCAACAGGCAGCATTCTT...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGGGATGCCCAGGTGCCTaGTGGCAAGAGACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEGCPGA*WQETRQ
Trigger: CTGCCTTGTCTCTTGCCACCAGGCACCTGGGCATCC...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTGGTGCCTGATGAGGTaGTGTCTTCGCCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGWCLMR*CLRPKV
Trigger: GACCTTTGGGCGAAGACATCACCTCATCAGGCACCA...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTCATTCAGTGCACACGTaGCACTTTGGCACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGHSVHT*HFGTGG
Trigger: CCCACCAGTGCCAAAGTGTCACGTGTGCACTGAATG...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGTGGGGTCAGGGCTTATaGTTCTGGCCACTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILWGQGL*FWPLGF
Trigger: GAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCA...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACAGCAAGGGTCACATTTaGTCTCCCAGGCCTGAAATT +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDSKGHI*SPRPEI
Trigger: AATTTCAGGCCTGGGAGATCAAATGTGACCCTTGCT...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTGATTTGCCTTCTGCATaGACTCTCTGGTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGDLPSA*TLWWLA
Trigger: GGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATC...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCTGCCGTTTCCTTGTaGCAGGGCTCTCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILAAVSL*QGSLQP
Trigger: AGGTTGGAGAGAGCCCTGGCACAAGGAAACGGCAGC...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAAGCTGCCGTTTCCTTGTaGCAGGGCTCTCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGEAAVSL*QGSLQP
Trigger: AGGTTGGAGAGAGCCCTGGCACAAGGAAACGGCAGC...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCAGACTCCTCTTTCTCTaGCAGGGCAAAAGCAATCTG +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSRLLFL*QGKSNL
Trigger: CAGATTGCTTTTGCCCTGGCAGAGAAAGAGGAGTCT...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCATGCCCACTGCAGTGTaGGTTCTAGGGCTTTCATTT +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPMPTAV*VLGLSF
Trigger: AAATGAAAGCCCTAGAACCCACACTGCAGTGGGCAT...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301042.7
ENST00000544117.6
CDS-3UTR CCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTGGTACTGTTCTCCATaGCCGCTCTTCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGWYCSP*PLFLAS
Trigger: GGAAGCCAGGAAGAGCGGCCATGGAGAACAGTACCA...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTCACTGGGGGCATGTGTaGGGTCTTAACAGGGAATCC +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGHWGHV*GLNRES
Trigger: GGATTCCCTGTTAAGACCCCACACATGCCCCCAGTG...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAAGCACTCTCTGGTGGCTaGCCAGATGGGAGTTGCATC +
Preference number: 4 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGEALSGG*PDGSCI
Trigger: GATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGC...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCATCTGCATGCACTCTCTaGTGGCTGGCCAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSSACTL*WLARWE
Trigger: CTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGA...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGGTGACACTTTGGCACTaGTGGGGCACGCTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEVTLWH*WGTLPF
Trigger: AAACGGCAGCGTGCCCCACCAGTGCCAAAGTGTCAC...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTCAGTGTCTCACAAGGTaGTGCCTTCGGCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGQCLTR*CLRPKL
Trigger: GAGCTTTGGCCGAAGGCACCACCTTGTGAGACACTG...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCGGACTTTGTCCCTGGTaGGTGAGCAGGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSGLCPW*VSRCLS
Trigger: GGACAGGCACCTGCTCACCCACCAGGGACAAAGTCC...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCGGTGGAGGTACCAGATaGAAAAATGTGACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPGGGTR*KNVTGS
Trigger: GGAACCTGTCACATTTTTCCATCTGGTACCTCCACC...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCCCTCATAGGTGCGCCTaGGAGAGGAACTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSPHRCA*ERNWRR
Trigger: CCTCCTCCAGTTCCTCTCCCAGGCGCACCTATGAGG...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGGTACTAGGCAGGGGGTaGAGTAGTGGTGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEVLGRG*SSGGVL
Trigger: CAGGACACCACCACTACTCCACCCCCTGCCTAGTAC...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTCTCCTCCTTCTAGTTaGGAAAGCATGTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPSPPSS*ESMSSL
Trigger: CAAACTGGACATGCTTTCTCAACTAGAAGGAGGAGA...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTCCAGTGTGTGTTTGTTaGTGCCTGGCAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGPVCVC*CLARWE
Trigger: TTCCCACCTTGCCAGGCATCAACAAACACACACTGG...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGCATTCAGTGCACACGTaGCACTTTGGCACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILHSVHT*HFGTGG
Trigger: CCCACCAGTGCCAAAGTGTCACGTGTGCACTGAATG...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCCCAGATGGAAAAATGTaGCAGGTTCCTGAAGATGAT +
Preference number: 4 (lower is better)
Translates to: GSGLMILATGVQENGSPGPDGKM*QVPEDD
Trigger: ATCATCTTCAGGAACCTGTCACATTTTTCCATCTGG...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCGCTGCCGTTTCCTTGTaGCAGGGCTCTCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSAAVSL*QGSLQP
Trigger: AGGTTGGAGAGAGCCCTGGCACAAGGAAACGGCAGC...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCGTTGGAGAGAACAAATaGCCTTGGAAGGGCATGTTA +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPVGENK*PWKGML
Trigger: TAACATGCCCTTCCAAGGGCATTTGTTCTCTCCAAC...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAAGCAGGGCCTGACAGTTaGGATGGGCACGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: LAQRPNFESHSLVWLTREAGPDS*DGHGET
Trigger: TGTCTCCCCGTGCCCATCGCAACTGTCAGGCCCTGC...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS-3UTR CCA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACCATGGCCGCTCTTCCTaGCTTCCCCTTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDHGRSS*LPLSTW
Trigger: CCAGGTGGAAAGGGGAAGCCAGGAAGAGCGGCCATG...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCACTCTCCTCTAAGTCCTaGGGGTCAGGGACCCATTGT +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSLSSKS*GSGTHC
Trigger: ACAATGGGTCCCTGACCCCCAGGACTTAGAGGAGAG...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAATTCCTCTGGAGCTGCTaGGCATGGAATCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGEFLWSC*AWNPSS
Trigger: AGAGCTGGGATTCCATGCCCAGCAGCTCCAGAGGAA...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATCACTGGGGGCATGTGTaGGGTCTTAACAGGGAATCC +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYHWGHV*GLNRES
Trigger: GGATTCCCTGTTAAGACCCCACACATGCCCCCAGTG...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCACACTGGGGGCATGTGTaGGGTCTTAACAGGGAATCC +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSHWGHV*GLNRES
Trigger: GGATTCCCTGTTAAGACCCCACACATGCCCCCAGTG...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGTCTGCATGCACTCTCTaGTGGCTGGCCAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRSACTL*WLARWE
Trigger: CTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGA...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGACACTTTGGCACTGGTaGGGCACGCTGCCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRTLWHW*GTLPFP
Trigger: AGGAAACGGCAGCGTGCCCCACCAGTGCCAAAGTGT...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCGAGCCAACTCATCAATaGGCTGATGCGAAAGCAATA +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSEPTHQ*ADAKAI
Trigger: TATTGCTTTCGCATCAGCCCATTGATGAGTTGGCTC...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448928.7
CDS-3UTR CCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACGTCCTTTCAGATTTCTaGACCCAAGTATCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDVLSDF*TQVSSV
Trigger: CACTGAGGATACTTGGGTCCAGAAATCTGAAAGGAC...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCGCCAAGCCAAGAATTTaGAGGATGAGAGTGGTAAGT +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPAKPRI*RMRVVS
Trigger: ACTTACCACTCTCATCCTCCAAATTCTTGGCTTGGC...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTGGCAGAGTGGTGAGGTaGCTGATGAACTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGGRVVR*LMNCYS
Trigger: GCTATAGCAGTTCATCAGCCACCTCACCACTCTGCC...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTGGGCTGCATGGCAAGTaGGCATTCATCCCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGGLHGK*AFIPKV
Trigger: AACTTTGGGGATGAATGCCCACTTGCCATGCAGCCC...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAAGGTTACCAGGCCCTGTaGTCCAGCCGCAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LAQRPNFESHSLVWLTREGYQAL*SSRKKC
Trigger: GCACTTCTTGCGGCTGGATCACAGGGCCTGGTAACC...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCTGGTGCCTGATGAGGTaGTGTCTTCGCCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSWCLMR*CLRPKV
Trigger: GACCTTTGGGCGAAGACATCACCTCATCAGGCACCA...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTCGGCAGCCCTGGCAGTaGCTCCTGGTAGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCRQPWQ*LLVAPA
Trigger: AGCCGGTGCTACCAGGAGTCACTGCCAGGGCTGCCG...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACTGGGGTCAGGGCTTATaGTTCTGGCCACTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDWGQGL*FWPLGF
Trigger: GAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCA...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCCCAGATGGAAAAATGTaGCAGGTTCCTGAAGATGAT +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPPDGKM*QVPEDD
Trigger: ATCATCTTCAGGAACCTGTCACATTTTTCCATCTGG...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCCCAAAGACCAAATTTTaGGAGCCACAGTTTGGTATG +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPPKTKF*EPQFGM
Trigger: CATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGG...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGTTGATCTCCCAGGCCTaGAATTGCCAGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRLISQA*NCQCLA
Trigger: TGCCAGGCACTGGCAATTTCAGGCCTGGGAGATCAA...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGTTCCACCTGGGGCTCTaGTCCATCCAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILFHLGL*SIQLYI
Trigger: AATGTACAGCTGGATGGAGCAGAGCCCCAGGTGGAA...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATTTCCACCTGGGGCTCTaGTCCATCCAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYFHLGL*SIQLYI
Trigger: AATGTACAGCTGGATGGAGCAGAGCCCCAGGTGGAA...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGTGTCTCACAAGGTGGTaGCTTCGGCCAAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILCLTRW*LRPKLF
Trigger: GAAGAGCTTTGGCCGAAGGCACCACCTTGTGAGACA...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTAGAACTGGTGAGAAATaGTCTGGCCATTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGRTGEK*SGHCWD
Trigger: GTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCT...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACTCAGCCCATGTAGGATaGATTGCTTCCCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDSAHVG*IASQKF
Trigger: AAACTTTTGGGAAGCAATGCATCCTACATGGGCTGA...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGCGCAGAGCCAGCACCTaGGCGGTTAAGGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRRRAST*AVKVVA
Trigger: GGCTACCACCTTAACCGCCCAGGTGCTGGCTCTGCG...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301042.7
ENST00000544117.6
CDS-3UTR CCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCTGGTACTGTTCTCCATaGCCGCTCTTCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSWYCSP*PLFLAS
Trigger: GGAAGCCAGGAAGAGCGGCCATGGAGAACAGTACCA...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCGTGCTCCAGAGGTCCTaGTACTGTTCTCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: WISAINCQYHSPLENSSGVLQRS*YCSPWP
Trigger: CGGCCATGGAGAACAGTACCAGGACCTCTGGAGCAC...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCACTCCTGAAGGGACTGTaGCTCCTCTTCAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSLLKGL*LLFKVT
Trigger: TGTGACCTTGAAGAGGAGCCACAGTCCCTTCAGGAG...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCGTCCAGTTTGGGAATTaGAAATCTCAGAGAGACTAC +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSVQFGN*KSQRDY
Trigger: GTAGTCTCTCTGAGATTTCCAATTCCCAAACTGGAC...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAAAGCATGTCCAGTTTaGGAATTGGAAATCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GSGLMILATGVQENGSPGKACPV*ELEISE
Trigger: CTCTGAGATTTCCAATTCCCAAACTGGACATGCTTT...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCTATCTTCAGACACGCTaGATAACATTCTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSYLQTR*ITFWEV
Trigger: AACCTCCCAGAATGTTATCCAGCGTGTCTGAAGATA...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATACTCAGAGCACCTGCTaGTCTTGTCATGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYTQSTC*SCHVGG
Trigger: CCCACCTACATGACAAGACCAGCAGGTGCTCTGAGT...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAATGGTGGCTGGCCAGATaGGAGTTGCATCGGAAATTC +
Preference number: 4 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGEWWLAR*ELHRKF
Trigger: GAATTTCCGATGCAACTCCCATCTGGCCAGCCACCA...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCGTATATACTGCTGATTaGCATAAGGAAGACAGACCC +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSVYTAD*HKEDRP
Trigger: GGGTCTGTCTTCCTTATGCCAATCAGCAGTATATAC...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCGAAATTGCCAGTGCCTaGCACATAATAAGGACACAA +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPEIASA*HIIRTQ
Trigger: TTGTGTCCTTATTATGTGCCAGGCACTGGCAATTTC...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCGGCACACGGACGAGTTaGCTCCGTCCATCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: WISAINCQYHSPLENSSGGTRTS*LRPSEN
Trigger: GTTCTCTGATGGACGGAGCCAACTCGTCCGTGTGCC...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS-3UTR TCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGGGTTACCAGGCCCTGTaGTCCAGCCGCAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRGYQAL*SSRKKC
Trigger: GCACTTCTTGCGGCTGGATCACAGGGCCTGGTAACC...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGTACCACTCTCCTCTTaGGAACAGCTCAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILVPLSS*EQLRLN
Trigger: ATTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTAC...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGTACCACTCTCCTCTTaGGAACAGCTCAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYVPLSS*EQLRLN
Trigger: ATTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTAC...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGGGGGCTCTGGATGCCTaGTCACTATCTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRGALDA*SLSLVS
Trigger: GGAAACAAGAGATAGTGATCAGGCATCCAGAGCCCC...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGACTCTGAGGAGCTGTaGTTCACCCAGTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSDSEEL*FTQFFL
Trigger: CAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTC...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTAGCAGAGCTCACCTGTaGTCCAGCCGCAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFSRAHL*SSRKKC
Trigger: GCACTTCTTGCGGCTGGATCACAGGTGAGCTCTGCT...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448928.7
CDS-3UTR TCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACACCTCTTTGGTTCTCTaGAGCCATAACATTACTTTG +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDTSLVL*SHNITL
Trigger: CAAAGTAATGTTATGGCTTCAGAGAACCAAAGAGGT...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCACCTCTTTGGTTCTCTaGAGCCATAACATTACTTTG +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSTSLVL*SHNITL
Trigger: CAAAGTAATGTTATGGCTTCAGAGAACCAAAGAGGT...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCATCCTTCCCGAGTTTCTaGTTCAGTAGTTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSSFPSF*FSSSPG
Trigger: CCCAGGAGAACTACTGAATCAGAAACTCGGGAAGGA...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGCTGACAACAGGAGTGTaGAGATCCATCCGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEELTTGV*RSIRKG
Trigger: CCCTTTTCGGATGGATCTTCACACTCCTGTTGTCAG...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACAGGTCACAGCACAGGTaGTCCAGAGGTCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDRSQHR*SRGPGT
Trigger: AGTACCAGGACCTCTGGAGCACCTGTGCTGTGACCT...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTGGGAATCCATCTCTGTaGTACACAGCAGGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGGNPSL*YTAGLR
Trigger: TCTCAAACCTGCTGTGTAGCACAGAGATGGATTCCC...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGGCCTTTGCAGGATTTaGCTTCTGCATGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILGLCRI*LLHALS
Trigger: AGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCC...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGCCTTTGCAGGATTTaGCTTCTGCATGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSGLCRI*LLHALS
Trigger: AGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCC...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTGCTGCCGTTTCCTTGTaGCAGGGCTCTCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFAAVSL*QGSLQP
Trigger: AGGTTGGAGAGAGCCCTGGCACAAGGAAACGGCAGC...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACACTGGTGGGGCACGCTaGCGTTTCCTTGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENTGGAR*RFLVPG
Trigger: CCCTGGCACAAGGAAACGGCAGCGTGCCCCACCAGT...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGAGAACTGGTGAGAAATaGTCTGGCCATTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILRTGEK*SGHCWD
Trigger: GTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCT...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTCCCTAACCCCGAACTaGTCTTACATACAAGATAAT +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPSLTPN*SYIQDN
Trigger: ATTATCTTGTATGTAAGAGCAGTTCGGGGTTAGGGA...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACCATAAGCAAGAGAACTaGATTCCAGGAAGAATGAAG +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDHKQEN*IPGRMK
Trigger: CTTCATTCTTCCTGGAATGCAGTTCTCTTGCTTATG...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACCGGGGGCTAAGAATTTaGATTTCAAACAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDRGLRI*ISNKFP
Trigger: TGGAAACTTGTTTGAAATGCAAATTCTTAGCCCCCG...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCATTGTAGAGGAAGAATaGTGCCTGTTGGGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGIVEEE*CLLGKR
Trigger: CCTTTTTCCCAACAGGCAGCATTCTTCCTCTACAAT...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACAAAGCATGTCCAGTTTaGGAATTGGAAATCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GLMILATGVQENGSPGSDKACPV*ELEISE
Trigger: CTCTGAGATTTCCAATTCCCAAACTGGACATGCTTT...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCTTCCTCTGGAGCTGCTaGGCATGGAATCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: WISAINCQYHSPLENSSGFLWSC*AWNPSS
Trigger: AGAGCTGGGATTCCATGCCCAGCAGCTCCAGAGGAA...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCACACTTTGGCACTGGTaGGGCACGCTGCCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCTLWHW*GTLPFP
Trigger: AGGAAACGGCAGCGTGCCCCACCAGTGCCAAAGTGT...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTGTGACACTTTGGCACTaGTGGGGCACGCTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFVTLWH*WGTLPF
Trigger: AAACGGCAGCGTGCCCCACCAGTGCCAAAGTGTCAC...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCGTATATACTGCTGATTaGCATAAGGAAGACAGACCC +
Preference number: 4 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGVYTAD*HKEDRP
Trigger: GGGTCTGTCTTCCTTATGCCAATCAGCAGTATATAC...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCACACCTTTCCAGAATTaGAAGGAAAACCAACCAGAA +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSTPFQN*KENQPE
Trigger: TTCTGGTTGGTTTTCCTTCCAATTCTGGAAAGGTGT...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGCAAGAGAGGTGGTGTTaGACCGAGGTAGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILQERWC*TEVEKT
Trigger: TGTCTTCTCTACCTCGGTCCAACACCACCTCTCTTG...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGTTTGTCCAAGAGAGGTaGTGTTGGACCGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEFVQER*CWTEVE
Trigger: CTCTACCTCGGTCCAACACCACCTCTCTTGGACAAA...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGATTGAGAGTTTGGGCTaGGCGCGGTGGCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPSSFTELRVEEDLATKGIESLG*ARWLRP
Trigger: AGGCCTGAGCCACCGCGCCCAGCCCAAACTCTCAAT...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGGACAAGGCAGGAAAGTaGTGGTGGGGGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRDKAGK*WWGRAW
Trigger: CCAAGCCCTCCCCCACCACCACTTTCCTGCCTTGTC...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCATTCAGTGCACACGTaGCACTTTGGCACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFHSVHT*HFGTGG
Trigger: CCCACCAGTGCCAAAGTGTCACGTGTGCACTGAATG...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCGACTCTGAGGAGCTGTaGTTCACCCAGTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSDSEEL*FTQFFL
Trigger: CAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTC...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCTTGAGTCCAGGACTCTaGGGAGCTGTGATTCACCCA +
Preference number: 4 (lower is better)
Translates to: WISAINCQYHSPLENSSGLSPGL*GAVIHP
Trigger: TGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAA...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGAAATGCTCCTGTTTCTaGGAAGCTAGGGCAAGACCT +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILKCSCF*EARARP
Trigger: AGGTCTTGCCCTAGCTTCTCAGAAACAGGAGCATTT...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCGTCCAGATTTATCACTaGACCCAATACTTTCTTACT +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSVQIYH*TQYFLT
Trigger: AGTAAGAAAGTATTGGGTTCAGTGATAAATCTGGAC...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGGAACTCCCTTTCTTTaGAGGCAGTTTAGGGATTCC +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYGTPFL*RQFRDS
Trigger: GGAATCCCTAAACTGCCTTCAAAGAAAGGGAGTTCC...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGGGACGGGGTGAAACATaGACATTTGAGGCTGATTCC +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRGRGET*TFEADS
Trigger: GGAATCAGCCTCAAATGTTCATGTTTCACCCCGTCC...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCCTGACAACAGGAGTGTaGAGATCCATCCGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSLTTGV*RSIRKG
Trigger: CCCTTTTCGGATGGATCTTCACACTCCTGTTGTCAG...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATTTCCTCCCCACAGCCTaGATCTGTCAGAATCTTCTA +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYFLPTA*ICQNLL
Trigger: TAGAAGATTCTGACAGATTCAGGCTGTGGGGAGGAA...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTAGGTCACAGCACAGGTaGTCCAGAGGTCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFRSQHR*SRGPGT
Trigger: AGTACCAGGACCTCTGGAGCACCTGTGCTGTGACCT...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATTGGCCAGATGGGAGTTaGATCGGAAATTCTTACCAC +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYWPDGS*IGNSYH
Trigger: GTGGTAAGAATTTCCGATGCAACTCCCATCTGGCCA...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGTGGCCAGATGGGAGTTaGATCGGAAATTCTTACCAC +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILWPDGS*IGNSYH
Trigger: GTGGTAAGAATTTCCGATGCAACTCCCATCTGGCCA...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTGATTTGCCTTCTGCATaGACTCTCTGGTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFDLPSA*TLWWLA
Trigger: GGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATC...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATCAACCTCTTGGCCTTTaGAGGATTTGCCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYQPLGL*RICLLH
Trigger: ATGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTG...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACTGTCTCACAAGGTGGTaGCTTCGGCCAAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDCLTRW*LRPKLF
Trigger: GAAGAGCTTTGGCCGAAGGCACCACCTTGTGAGACA...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATAGGGCAAAAGCAATCTaGAGCCCAGAGATTCAAACC +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYRAKAI*SPEIQT
Trigger: GGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCT...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGAGACTCCTCTTTCTCTaGCAGGGCAAAAGCAATCTG +
Preference number: 4 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEERLLFL*QGKSNL
Trigger: CAGATTGCTTTTGCCCTGGCAGAGAAAGAGGAGTCT...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCTACAAAGTTTCTATGTaGCTCTTGCCTGAAATCAAC +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSYKVSM*LLPEIN
Trigger: GTTGATTTCAGGCAAGAGGCACATAGAAACTTTGTA...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACCCACTCCCATTCAGTaGATGCATCCTAATTCAGAG +
Preference number: 4 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGEPTPIQ*MHPNSE
Trigger: CTCTGAATTAGGATGCATGCACTGAATGGGAGTGGG...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTCCACGGGGTAACCTGTaGGCGAGTGACAGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTPRGNL*ASDSGG
Trigger: CCCGCCGCTGTCACTCGCGCACAGGTTACCCCGTGG...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS-3UTR CCA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACCTCCTGAAGGGACTGTaGCTCCTCTTCAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDLLKGL*LLFKVT
Trigger: TGTGACCTTGAAGAGGAGCCACAGTCCCTTCAGGAG...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAACTCTCCTCTAAGTCCTaGGGGTCAGGGACCCATTGT +
Preference number: 4 (lower is better)
Translates to: LAQRPNFESHSLVWLTRELSSKS*GSGTHC
Trigger: ACAATGGGTCCCTGACCCCCAGGACTTAGAGGAGAG...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCAACTGTTTCCCACACTaGGGGCATGTGTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: WISAINCQYHSPLENSSGNCFPH*GHVWGL
Trigger: AAGACCCCACACATGCCCCCAGTGTGGGAAACAGTT...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGTCTTGTCATGTAGGTaGGTTTTCTGGTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILVLSCR*VFWCLM
Trigger: CATCAGGCACCAGAAAACCCACCTACATGACAAGAC...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGTCTTGTCATGTAGGTaGGTTTTCTGGTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYVLSCR*VFWCLM
Trigger: CATCAGGCACCAGAAAACCCACCTACATGACAAGAC...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGGTGACACTTTGGCACTaGTGGGGCACGCTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: SPSSFTELRVEEDLATKGVTLWH*WGTLPF
Trigger: AAACGGCAGCGTGCCCCACCAGTGCCAAAGTGTCAC...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATGCACACGTGACACTTTaGCACTGGTGGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHAHVTL*HWWGTL
Trigger: CAGCGTGCCCCACCAGTGCCAAAGTGTCACGTGTGC...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACTGCTCTGGCCATTGCTaGGACCTCATCTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDCSGHC*DLIFLG
Trigger: CCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCA...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATTCCTCCCAGCCCCTATaGGTGACCGAGCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDSSQPL*VTEPPP
Trigger: TGGTGGGGGCTCGGTCACCCATAGGGGCTGGGAGGA...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS-3UTR TCA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCGGGGCTCTGGATGCCTaGTCACTATCTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCGALDA*SLSLVS
Trigger: GGAAACAAGAGATAGTGATCAGGCATCCAGAGCCCC...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAAGGGGCTCTGGATGCCTaGTCACTATCTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LAQRPNFESHSLVWLTREGALDA*SLSLVS
Trigger: GGAAACAAGAGATAGTGATCAGGCATCCAGAGCCCC...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTCTTAGCCTTGTAGTGTaGTCTCTCAGCTGGATATAT +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGLSLVV*SLSWIY
Trigger: ATATATCCAGCTGAGAGATCACACTACAAGGCTAAG...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGGGAACTCCCTTTCTTTaGAGGCAGTTTAGGGATTCC +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRGTPFL*RQFRDS
Trigger: GGAATCCCTAAACTGCCTTCAAAGAAAGGGAGTTCC...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGAAACAAGTTTCCAGGTaGTATTTATGCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEKQVSR*YLCCWP
Trigger: GGGCCAGCAGCATAAATATCACCTGGAAACTTGTTT...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGAGGTCACAGCACAGGTaGTCCAGAGGTCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRRSQHR*SRGPGT
Trigger: AGTACCAGGACCTCTGGAGCACCTGTGCTGTGACCT...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATGCATTCCTCTGGAGCTaGTGGGCATGGAATCCCAGC +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHAFLWS*WAWNPS
Trigger: GCTGGGATTCCATGCCCAGCAGCTCCAGAGGAATGC...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGGATTTGCCTTCTGCATaGACTCTCTGGTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRDLPSA*TLWWLA
Trigger: GGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATC...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCACTGGTGGGGCACGCTaGCGTTTCCTTGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSTGGAR*RFLVPG
Trigger: CCCTGGCACAAGGAAACGGCAGCGTGCCCCACCAGT...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATAAATGCTCTGGCCATTaGTGGGACCTCATCTTTCTA +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYKCSGH*WDLIFL
Trigger: TAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTT...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCACATTTAGGAAACACTaGCTTAATAGAACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSTFRKH*LNRTFS
Trigger: ACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAAAGGGGGCTCTGGATaGCTGATCACTATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRKGGSG*LITISC
Trigger: ACAAGAGATAGTGATCAGGCATCCAGAGCCCCCTTT...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAAAGGGTGAGGTACCACTaGTTGAAATATGAATCCCCT +
Preference number: 4 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGERVRYH*LKYESP
Trigger: AGGGGATTCATATTTCAAGCAGTGGTACCTCACCCT...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGAGGGTGAGGTACCACTaGTTGAAATATGAATCCCCT +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILRVRYH*LKYESP
Trigger: AGGGGATTCATATTTCAAGCAGTGGTACCTCACCCT...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGAGGTGGCTGATGAACTaGTATAGCCAAGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEERWLMN*YSQAKN
Trigger: ATTCTTGGCTTGGCTATAGCAGTTCATCAGCCACCT...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGAAGAGGATGCCCAGGTaGCTGGTGGCAAGAGACAAG +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRKRMPR*LVARDK
Trigger: CTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTT...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTCATGGCCGCTCTTCCTaGCTTCCCCTTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCHGRSS*LPLSTW
Trigger: CCAGGTGGAAAGGGGAAGCCAGGAAGAGCGGCCATG...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTGTCCAGTTTGGGAATTaGAAATCTCAGAGAGACTAC +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGVQFGN*KSQRDY
Trigger: GTAGTCTCTCTGAGATTTCCAATTCCCAAACTGGAC...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCACGCTGGATAACATTCTaGGAGGTTCTGCTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSRWITF*EVLLLV
Trigger: AACTAGAAGCAGAACCTCCCAGAATGTTATCCAGCG...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATCGCTGGATAACATTCTaGGAGGTTCTGCTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYRWITF*EVLLLV
Trigger: AACTAGAAGCAGAACCTCCCAGAATGTTATCCAGCG...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCGTCTTGTCATGTAGGTaGGTTTTCTGGTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSVLSCR*VFWCLM
Trigger: CATCAGGCACCAGAAAACCCACCTACATGACAAGAC...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCACTCAGAGCACCTGCTaGTCTTGTCATGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCTQSTC*SCHVGG
Trigger: CCCACCTACATGACAAGACCAGCAGGTGCTCTGAGT...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTTGGTGGCTGGCCAGATaGGAGTTGCATCGGAAATTC +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFWWLAR*ELHRKF
Trigger: GAATTTCCGATGCAACTCCCATCTGGCCAGCCACCA...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACGCACTCTCTGGTGGCTaGCCAGATGGGAGTTGCATC +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENALSGG*PDGSCI
Trigger: GATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGC...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCGCATGCACTCTCTGGTaGCTGGCCAGATGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVACTLW*LARWEL
Trigger: CAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGC...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTTATGATTCTGGCCACTaGGGTTCAGGAGAACGGCAG +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFYDSGH*GSGERQ
Trigger: CTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATA...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCAATAGAACCTTCAGTTaGGTCTACTGCAGAAATTTT +
Preference number: 4 (lower is better)
Translates to: GMGSGLMILATGVQENGSNRTFS*VYCRNF
Trigger: AAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATT...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATTTCCTCTTGCCTCTCTaGTTCATTCCACCAATTGTG +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYFLLPL*FIPPIV
Trigger: CACAATTGGTGGAATGAACCAGAGAGGCAAGAGGAA...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCAAATTATCACCTCTTTaGTTCTCTGAAGCCATAACA +
Preference number: 4 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPKLSPL*FSEAIT
Trigger: TGTTATGGCTTCAGAGAACCAAAGAGGTGATAATTT...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGAATCCCCTAGCCAGTaGTTCTCAAACTTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYESPSQ*FSNFSL
Trigger: CAAGCTAAAGTTTGAGAACCACTGGCTAGGGGATTC...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCCAGCAGAATGCATTTTaGGCACCATGGCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSQQNAF*APWLHW
Trigger: CCAATGAAGCCATGGTGCCCAAAATGCATTCTGCTG...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCAAGAATGCTGCCTGTTaGGAAAAAGGAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: WISAINCQYHSPLENSSGKNAAC*EKGGGG
Trigger: GCCACCACCTCCTTTTTCCCAACAGGCAGCATTCTT...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGGGAGGCCAAGGTGGGTaGATCACGAGGTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRGGQGG*ITRSRD
Trigger: ATCTCTTGACCTCGTGATCCACCCACCTTGGCCTCC...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTGGATGCCCAGGTGCCTaGTGGCAAGAGACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCGCPGA*WQETRQ
Trigger: CTGCCTTGTCTCTTGCCACCAGGCACCTGGGCATCC...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGTCTCCTCCTTCTAGTTaGGAAAGCATGTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRSPPSS*ESMSSL
Trigger: CAAACTGGACATGCTTTCTCAACTAGAAGGAGGAGA...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGCTTAGCCTTGTAGTGTaGTCTCTCAGCTGGATATAT +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILLSLVV*SLSWIY
Trigger: ATATATCCAGCTGAGAGATCACACTACAAGGCTAAG...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACAAATGCTCCTGTTTCTaGGAAGCTAGGGCAAGACCT +
Preference number: 4 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDKCSCF*EARARP
Trigger: AGGTCTTGCCCTAGCTTCTCAGAAACAGGAGCATTT...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCGGACGGGGTGAAACATaGACATTTGAGGCTGATTCC +
Preference number: 4 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCGRGET*TFEADS
Trigger: GGAATCAGCCTCAAATGTTCATGTTTCACCCCGTCC...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTTGGATTTCACTTTTCTaGTATTGCCCAGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFWISLF*YCPAPP
Trigger: GGGTGGGGCTGGGCAATATCAGAAAAGTGAAATCCA...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACTTGATCTCCCAGGCCTaGAATTGCCAGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENLISQA*NCQCLA
Trigger: TGCCAGGCACTGGCAATTTCAGGCCTGGGAGATCAA...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATTCCAGGATGATCCCATaGCCACTGCAGTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHSRMIP*PLQCGF
Trigger: GAACCCACACTGCAGTGGGCATGGGATCATCCTGGA...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301042.7
ENST00000544117.6
CDS-3UTR GCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATAGGTCACAGCACAGGTaGTCCAGAGGTCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHRSQHR*SRGPGT
Trigger: AGTACCAGGACCTCTGGAGCACCTGTGCTGTGACCT...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGTCCCAGCTCTCATCATaGTCCGGGTTCCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRSQLSS*SGFQRT
Trigger: TGTTCTCTGGAACCCGGAGCATGATGAGAGCTGGGA...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCTCTTCCCACATTCAGTaGACACGTGACACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: WISAINCQYHSPLENSSGSSHIQ*TRDTLA
Trigger: TGCCAAAGTGTCACGTGTGCACTGAATGTGGGAAGA...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCATCAGCCCATGTAGGATaGATTGCTTCCCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSSAHVG*IASQKF
Trigger: AAACTTTTGGGAAGCAATGCATCCTACATGGGCTGA...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGTCAGCCCATGTAGGATaGATTGCTTCCCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEESAHVG*IASQKF
Trigger: AAACTTTTGGGAAGCAATGCATCCTACATGGGCTGA...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCACTGGATATATGTATGTaGAGGATGAAGGGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSLDICM*RMKGVG
Trigger: TCCTACTCCCTTCATCCTGCACATACATATATCCAG...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCAGACTCCTCTTTCTCTaGCAGGGCAAAAGCAATCTG +
Preference number: 4 (lower is better)
Translates to: WISAINCQYHSPLENSSGRLLFL*QGKSNL
Trigger: CAGATTGCTTTTGCCCTGGCAGAGAAAGAGGAGTCT...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGATTGTAGAGGAAGAATaGTGCCTGTTGGGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEIVEEE*CLLGKR
Trigger: CCTTTTTCCCAACAGGCAGCATTCTTCCTCTACAAT...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAAGAGGATGCCCAGGTaGCTGGTGGCAAGAGACAAG +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENKRMPR*LVARDK
Trigger: CTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTT...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCACGGAGCAGTTGGGCTaGATGGCAAGTGGGCATTCA +
Preference number: 4 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVTEQLG*MASGHS
Trigger: TGAATGCCCACTTGCCATGCAGCCCAACTGCTCCGT...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATCTTCCCCTTTCCACCTaGGGCTCTGCTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDLPLST*GSAPSS
Trigger: GCTGGATGGAGCAGAGCCCCAGGTGGAAAGGGGAAG...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACCCAGTGTTCCCCTCCTaGGGAATTGCAGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: RTNALGRACYCSVRTKQNPVFPS*GIAGTQ
Trigger: CTGGGTTCCTGCAATTCCCCAGGAGGGGAACACTGG...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCCTCTCCTCTAAGTCCTaGGGGTCAGGGACCCATTGT +
Preference number: 4 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVLSSKS*GSGTHC
Trigger: ACAATGGGTCCCTGACCCCCAGGACTTAGAGGAGAG...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCATATCTTCAGACACGCTaGATAACATTCTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSYLQTR*ITFWEV
Trigger: AACCTCCCAGAATGTTATCCAGCGTGTCTGAAGATA...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGTATCTTCAGACACGCTaGATAACATTCTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEYLQTR*ITFWEV
Trigger: AACCTCCCAGAATGTTATCCAGCGTGTCTGAAGATA...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGAACTGTTTCCCACACTaGGGGCATGTGTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SPSSFTELRVEEDLATKGNCFPH*GHVWGL
Trigger: AAGACCCCACACATGCCCCCAGTGTGGGAAACAGTT...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCGTCTTGTCATGTAGGTaGGTTTTCTGGTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: WISAINCQYHSPLENSSGVLSCR*VFWCLM
Trigger: CATCAGGCACCAGAAAACCCACCTACATGACAAGAC...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGTGGTGGCTGGCCAGATaGGAGTTGCATCGGAAATTC +
Preference number: 4 (lower is better)
Translates to: SPSSFTELRVEEDLATKGWWLAR*ELHRKF
Trigger: GAATTTCCGATGCAACTCCCATCTGGCCAGCCACCA...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTGCACTCTCTGGTGGCTaGCCAGATGGGAGTTGCATC +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCALSGG*PDGSCI
Trigger: GATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGC...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTGCATGCACTCTCTGGTaGCTGGCCAGATGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCACTLW*LARWEL
Trigger: CAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGC...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCGCACACGTGACACTTTaGCACTGGTGGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSAHVTL*HWWGTL
Trigger: CAGCGTGCCCCACCAGTGCCAAAGTGTCACGTGTGC...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGTATGATTCTGGCCACTaGGGTTCAGGAGAACGGCAG +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRYDSGH*GSGERQ
Trigger: CTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATA...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCATTAAGGGTCTTAGTGTaGACACCTTTCCAGAATTGG +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSLRVLV*TPFQNW
Trigger: CCAATTCTGGAAAGGTGTCCACACTAAGACCCTTAA...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCGGTGGAGGTACCAGATaGAAAAATGTGACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: WISAINCQYHSPLENSSGGGGTR*KNVTGS
Trigger: GGAACCTGTCACATTTTTCCATCTGGTACCTCCACC...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCATCCATGGCCCCTCGTTaGTCTCTAATCCAATTTTTA +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSSMAPR*SLIQFL
Trigger: TAAAAATTGGATTAGAGACCAACGAGGGGCCATGGA...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACCAGCAGAATGCATTTTaGGCACCATGGCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDQQNAF*APWLHW
Trigger: CCAATGAAGCCATGGTGCCCAAAATGCATTCTGCTG...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATCCTCATAGGTGCGCCTaGGAGAGGAACTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDPHRCA*ERNWRR
Trigger: CCTCCTCCAGTTCCTCTCCCAGGCGCACCTATGAGG...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGGGCAGAGTGGTGAGGTaGCTGATGAACTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: SPSSFTELRVEEDLATKGGRVVR*LMNCYS
Trigger: GCTATAGCAGTTCATCAGCCACCTCACCACTCTGCC...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATGGAGGCCAAGGTGGGTaGATCACGAGGTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHGGQGG*ITRSRD
Trigger: ATCTCTTGACCTCGTGATCCACCCACCTTGGCCTCC...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCATTGAGAGTTTGGGCTaGGCGCGGTGGCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSIESLG*ARWLRP
Trigger: AGGCCTGAGCCACCGCGCCCAGCCCAAACTCTCAAT...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCTGGTGGGGGAGGGCTTaGCTGAAGAACACACTGAGA +
Preference number: 4 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVWWGRA*LKNTLR
Trigger: TCTCAGTGTGTTCTTCAGCCAAGCCCTCCCCCACCA...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCGACAAGGCAGGAAAGTaGTGGTGGGGGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSDKAGK*WWGRAW
Trigger: CCAAGCCCTCCCCCACCACCACTTTCCTGCCTTGTC...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CAA 72 bp TTAGACTCCATGATGCCTTTCAGCTGGGTGCTATACTaGCACCTAACTCTGGGGGCTTCACTTTCTATCCCT +
Preference number: 4 (lower is better)
Translates to: LDSMMPFSWVLY*HLTLGASLSIP
Trigger: AGGGATAGAAAGTGAAGCCCCCAGAGTTAGGTGCAAGTATAGCACCCAGCTGAAAGGCATCATGGAGTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCTCTCCTCCTTCTAGTTaGGAAAGCATGTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: WISAINCQYHSPLENSSGSPPSS*ESMSSL
Trigger: CAAACTGGACATGCTTTCTCAACTAGAAGGAGGAGA...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACTGGTGCCTGATGAGGTaGTGTCTTCGCCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: RTNALGRACYCSVRTKQNWCLMR*CLRPKV
Trigger: GACCTTTGGGCGAAGACATCACCTCATCAGGCACCA...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCCATTCAGTGCACACGTaGCACTTTGGCACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: NPILSYSLGHLLILILKCHSVHT*HFGTGG
Trigger: CCCACCAGTGCCAAAGTGTCACGTGTGCACTGAATG...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTGTCCCTGGTGGGTaGGCAGGTGCCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNFVPGG*AGACPG
Trigger: ACCTGGACAGGCACCTGCTCACCCACCAGGGACAAA...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCTATGTGCCTCTTGCCTaGAATCAACAAGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSYVPLA*NQQETA
Trigger: AGCTGTTTCTTGTTGATTTCAGGCAAGAGGCACATA...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACTTGAGTCCAGGACTCTaGGGAGCTGTGATTCACCCA +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENLSPGL*GAVIHP
Trigger: TGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAA...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCTGGGGTCTAATCTTTTaGCCTTGGAGAAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCWGLIF*PWRRPV
Trigger: CACAGGTCTTCTCCAAGGTCAAAAGATTAGACCCCA...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGAATTGGCCAGAAGCTTaGAGAGATAAACTAGAATGG +
Preference number: 4 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEENWPEA*RDKLEW
Trigger: CCATTCTAGTTTATCTCTTCAAGCTTCTGGCCAATT...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTCTGTGGGAGTGTGTATaGGAAAGGGGCAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCLWECV*ERGRVV
Trigger: CACCACTCTGCCCCTTTCTCATACACACTCCCACAG...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGCACACTCAGAGCACCTaGTGGTCTTGTCATGTAGGT +
Preference number: 4 (lower is better)
Translates to: SPSSFTELRVEEDLATKGHTQST*WSCHVG
Trigger: ACCTACATGACAAGACCAGCAGGTGCTCTGAGTGTG...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATGCAGGATTTGCCTTCTaGATGCACTCTCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHAGFAF*MHSLVA
Trigger: AGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGC...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCAACCTCTTGGCCTTTaGAGGATTTGCCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFQPLGL*RICLLH
Trigger: ATGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTG...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCAGGGCAAAAGCAATCTaGAGCCCAGAGATTCAAACC +
Preference number: 4 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCRAKAI*SPEIQT
Trigger: GGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCT...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCAATAACCCAAAGGATTaGCCCTTCTGTAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCNNPKD*PFCRRP
Trigger: GGGCCTTCTACAGAAGGGGCAATCCTTTGGGTTATT...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCCCCAAGTATCCTCAGTaGCCATATTGGAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVPKYPQ*PYWKPQ
Trigger: CTGGGGCTTCCAATATGGGCACTGAGGATACTTGGG...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAACCTAGTTCTCTCTTATaGCCTGGGGACTCTGATGTT +
Preference number: 4 (lower is better)
Translates to: LAQRPNFESHSLVWLTREPSSLL*PGDSDV
Trigger: AACATCAGAGTCCCCAGGGCATAAGAGAGAACTAGG...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCACGGAGCAGTTGGGCTaGATGGCAAGTGGGCATTCA +
Preference number: 4 (lower is better)
Translates to: NPILSYSLGHLLILILKCTEQLG*MASGHS
Trigger: TGAATGCCCACTTGCCATGCAGCCCAACTGCTCCGT...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATCTTCCCCTTTCCACCTaGGGCTCTGCTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNLPLST*GSAPSS
Trigger: GCTGGATGGAGCAGAGCCCCAGGTGGAAAGGGGAAG...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCCATGGCCGCTCTTCCTaGCTTCCCCTTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQAHGRSS*LPLSTW
Trigger: CCAGGTGGAAAGGGGAAGCCAGGAAGAGCGGCCATG...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCGTGCTCCAGAGGTCCTaGTACTGTTCTCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSVLQRS*YCSPWP
Trigger: CGGCCATGGAGAACAGTACCAGGACCTCTGGAGCAC...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATCCAGTGTTCCCCTCCTaGGGAATTGCAGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDPVFPS*GIAGTQ
Trigger: CTGGGTTCCTGCAATTCCCCAGGAGGGGAACACTGG...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCCCAGTGTTCCCCTCCTaGGGAATTGCAGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSPVFPS*GIAGTQ
Trigger: CTGGGTTCCTGCAATTCCCCAGGAGGGGAACACTGG...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAAAAGCATGTCCAGTTTaGGAATTGGAAATCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSKACPV*ELEISE
Trigger: CTCTGAGATTTCCAATTCCCAAACTGGACATGCTTT...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACCGCTGGATAACATTCTaGGAGGTTCTGCTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDRWITF*EVLLLV
Trigger: AACTAGAAGCAGAACCTCCCAGAATGTTATCCAGCG...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGTATCTTCAGACACGCTaGATAACATTCTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRYLQTR*ITFWEV
Trigger: AACCTCCCAGAATGTTATCCAGCGTGTCTGAAGATA...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGCTCTCTCCAACCTCTTaGCCTTTGCAGGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: SPSSFTELRVEEDLATKGLSPTS*PLQDLP
Trigger: AGGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAG...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATGCACACGTGACACTTTaGCACTGGTGGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNAHVTL*HWWGTL
Trigger: CAGCGTGCCCCACCAGTGCCAAAGTGTCACGTGTGC...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCGGACTTTGTCCCTGGTaGGTGAGCAGGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQAGLCPW*VSRCLS
Trigger: GGACAGGCACCTGCTCACCCACCAGGGACAAAGTCC...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATACACCTTTCCAGAATTaGAAGGAAAACCAACCAGAA +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYTPFQN*KENQPE
Trigger: TTCTGGTTGGTTTTCCTTCCAATTCTGGAAAGGTGT...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGCAAGAGAGGTGGTGTTaGACCGAGGTAGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRQERWC*TEVEKT
Trigger: TGTCTTCTCTACCTCGGTCCAACACCACCTCTCTTG...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATATACTCAGAATAGGGTaGAGGTACCAGATGGAAAAA +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYILRIG*RYQMEK
Trigger: TTTTTCCATCTGGTACCTCCACCCTATTCTGAGTAT...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATGGGCTGCATGGCAAGTaGGCATTCATCCCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHGLHGK*AFIPKV
Trigger: AACTTTGGGGATGAATGCCCACTTGCCATGCAGCCC...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCCGCTGCTGTCTGTTCTaGAAGCATTTCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVRCCLF*KHFCCR
Trigger: TCTGCAGCAGAAATGCTTTCAGAACAGACAGCAGCG...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CTGGAACTCTCTGAGGCAGAGGAGGGATTAAACGAACATGGAATGATGATGTCCTCTCCTCCTTCTAGTTaGGAAAGCATGTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LELSEAEEGLNEHGMMMSSPPSS*ESMSSL
Trigger: CAAACTGGACATGCTTTCTCAACTAGAAGGAGGAGA...GGACATCATCATTCCATGTTCGTTTAATCCCTCCTCTGCCTCAGAGAGTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546874.1
CDS-3UTR TCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTTACCCTGCAGCAGCTaGAAAGCTAAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: NPILSYSLGHLLILILKCLPCSS*KAKPQP
Trigger: TGGCTGTGGCTTAGCTTTTCAGCTGCTGCAGGGTAA...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGAAATGCTCCTGTTTCTaGGAAGCTAGGGCAAGACCT +
Preference number: 4 (lower is better)
Translates to: SPSSFTELRVEEDLATKGKCSCF*EARARP
Trigger: AGGTCTTGCCCTAGCTTCTCAGAAACAGGAGCATTT...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACTCCTTCCCGAGTTTCTaGTTCAGTAGTTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENSFPSF*FSSSPG
Trigger: CCCAGGAGAACTACTGAATCAGAAACTCGGGAAGGA...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAATTGGCCAGAAGCTTaGAGAGATAAACTAGAATGG +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRNWPEA*RDKLEW
Trigger: CCATTCTAGTTTATCTCTTCAAGCTTCTGGCCAATT...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGAGCAAGGGTCACATTTaGTCTCCCAGGCCTGAAATT +
Preference number: 4 (lower is better)
Translates to: SPSSFTELRVEEDLATKGSKGHI*SPRPEI
Trigger: AATTTCAGGCCTGGGAGATCAAATGTGACCCTTGCT...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGCAGAGGAGGGATTAAACGAACATGGAATGATGATGTCCCGAACTGTGAAGGATGTGAAGGAAGTGGCTaGAAGCCTATTCTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GRGGIKRTWNDDVPNCEGCEGSG*KPILGS
Trigger: AGAACCTAGAATAGGCTTTCAGCCACTTCCTTCACA...TCCTTCACAGTTCGGGACATCATCATTCCATGTTCGTTTAATCCCTCCTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546874.1
CDS-3UTR GCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATGCATTCCTCTGGAGCTaGTGGGCATGGAATCCCAGC +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNAFLWS*WAWNPS
Trigger: GCTGGGATTCCATGCCCAGCAGCTCCAGAGGAATGC...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGGGGAATCCATCTCTGTaGTACACAGCAGGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRGNPSL*YTAGLR
Trigger: TCTCAAACCTGCTGTGTAGCACAGAGATGGATTCCC...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGTGGCCAGATGGGAGTTaGATCGGAAATTCTTACCAC +
Preference number: 4 (lower is better)
Translates to: SPSSFTELRVEEDLATKGWPDGS*IGNSYH
Trigger: GTGGTAAGAATTTCCGATGCAACTCCCATCTGGCCA...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCACTGGTGGGGCACGCTaGCGTTTCCTTGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFTGGAR*RFLVPG
Trigger: CCCTGGCACAAGGAAACGGCAGCGTGCCCCACCAGT...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACTGTCTCACAAGGTGGTaGCTTCGGCCAAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RTNALGRACYCSVRTKQNCLTRW*LRPKLF
Trigger: GAAGAGCTTTGGCCGAAGGCACCACCTTGTGAGACA...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTAAATGCTCTGGCCATTaGTGGGACCTCATCTTTCTA +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFKCSGH*WDLIFL
Trigger: TAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTT...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGAACTGGTGAGAAATaGTCTGGCCATTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENRTGEK*SGHCWD
Trigger: GTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCT...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCATTTCAGCCATAAACTaGCAGTACCACTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: WISAINCQYHSPLENSSGISAIN*QYHSPL
Trigger: AAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAAT...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATTTTCTATGTGCCTCTTaGCTGAAATCAACAAGAAAC +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYFLCAS*LKSTRN
Trigger: GTTTCTTGTTGATTTCAGGCAAGAGGCACATAGAAA...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGTACAAAGTTTCTATGTaGCTCTTGCCTGAAATCAAC +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILYKVSM*LLPEIN
Trigger: GTTGATTTCAGGCAAGAGGCACATAGAAACTTTGTA...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGCAGGAGCTTGGTAGTTaGCCCACCATAGTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SPSSFTELRVEEDLATKGQELGS*PTIVSD
Trigger: ATCAGAAACTATGGTGGGGCAACTACCAAGCTCCTG...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACGATGCCCACTCCACCTaGCTCTTATTAGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENDAHST*LLLEEP
Trigger: TGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGCATC...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCGGAAGGGCATGTTATTaGTCAGTCAGAACAAAGCAA +
Preference number: 4 (lower is better)
Translates to: WISAINCQYHSPLENSSGGRACY*SVRTKQ
Trigger: TTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCC...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTAGGTGGCTGATGAACTaGTATAGCCAAGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFRWLMN*YSQAKN
Trigger: ATTCTTGGCTTGGCTATAGCAGTTCATCAGCCACCT...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTTCCTGGAAGAGGATaGCCAGGTGCCTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSFPGRG*PGAWWQ
Trigger: TTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAA...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGCTTCCCCTTTCCACCTaGGGCTCTGCTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLLPLST*GSAPSS
Trigger: GCTGGATGGAGCAGAGCCCCAGGTGGAAAGGGGAAG...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCTGGTACTGTTCTCCATaGCCGCTCTTCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSWYCSP*PLFLAS
Trigger: GGAAGCCAGGAAGAGCGGCCATGGAGAACAGTACCA...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CAAATCCACAAAGTGCCTGCTACATCATTCTATTACACTCCCTTGCTTTTGAAGCTCTCCTCTAAGTCCTaGGGGTCAGGGACCCATTGT +
Preference number: 4 (lower is better)
Translates to: QIHKVPATSFYYTPLLLKLSSKS*GSGTHC
Trigger: ACAATGGGTCCCTGACCCCCAGGACTTAGAGGAGAG...CTTCAAAAGCAAGGGAGTGTAATAGAATGATGTAGCAGGCACTTTGTGGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546874.1
CDS-3UTR CCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCCTCTGGAGCTGCTaGGCATGGAATCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSFLWSC*AWNPSS
Trigger: AGAGCTGGGATTCCATGCCCAGCAGCTCCAGAGGAA...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCTTCCTCTGGAGCTGCTaGGCATGGAATCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSFLWSC*AWNPSS
Trigger: AGAGCTGGGATTCCATGCCCAGCAGCTCCAGAGGAA...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTAACTGTTTCCCACACTaGGGGCATGTGTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCNCFPH*GHVWGL
Trigger: AAGACCCCACACATGCCCCCAGTGTGGGAAACAGTT...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACGTGTTTGTTGATGCCTaGCAAGGTGGGAACCCCATA +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENVFVDA*QGGNPI
Trigger: TATGGGGTTCCCACCTTGCCAGGCATCAACAAACAC...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTACTCAGAGCACCTGCTaGTCTTGTCATGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCTQSTC*SCHVGG
Trigger: CCCACCTACATGACAAGACCAGCAGGTGCTCTGAGT...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATCTCTCTCCAACCTCTTaGCCTTTGCAGGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHLSPTS*PLQDLP
Trigger: AGGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAG...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTACACTTTGGCACTGGTaGGGCACGCTGCCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTTLWHW*GTLPFP
Trigger: AGGAAACGGCAGCGTGCCCCACCAGTGCCAAAGTGT...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGTGACACTTTGGCACTaGTGGGGCACGCTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTVTLWH*WGTLPF
Trigger: AAACGGCAGCGTGCCCCACCAGTGCCAAAGTGTCAC...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTGCTCTGGCCATTGCTaGGACCTCATCTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: NPILSYSLGHLLILILKCCSGHC*DLIFLG
Trigger: CCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCA...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACTGCTCTGGCCATTGCTaGGACCTCATCTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: RTNALGRACYCSVRTKQNCSGHC*DLIFLG
Trigger: CCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCA...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCACACCTTTCCAGAATTaGAAGGAAAACCAACCAGAA +
Preference number: 4 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSTPFQN*KENQPE
Trigger: TTCTGGTTGGTTTTCCTTCCAATTCTGGAAAGGTGT...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTATGATGCCTTTCAGCTaGGTGCTATACTTGCACCTA +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFMMPFS*VLYLHL
Trigger: TAGGTGCAAGTATAGCACCCAGCTGAAAGGCATCAT...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATTTTGTCCAAGAGAGGTaGTGTTGGACCGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHFVQER*CWTEVE
Trigger: CTCTACCTCGGTCCAACACCACCTCTCTTGGACAAA...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGTCCAGTTTGGGAATTaGAAATCCATTGATGATCAT +
Preference number: 4 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILVQFGN*KSIDDH
Trigger: ATGATCATCAATGGATTTCCAATTCCCAAACTGGAC...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448928.7
CDS-3UTR CCA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTAAATTATCACCTCTTTaGTTCTCTGAAGCCATAACA +
Preference number: 4 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGKLSPL*FSEAIT
Trigger: TGTTATGGCTTCAGAGAACCAAAGAGGTGATAATTT...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGAGAGATGGAAAGAACTaGCCTTCTGGCCTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SPSSFTELRVEEDLATKGRDGKN*PSGLCR
Trigger: CCTACAAAGGCCAGAAGGCCAGTTCTTTCCATCTCT...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCTTGAGAGCCACAGTTTaGTATGGCTCACAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCLRATV*YGSQGK
Trigger: TTTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAA...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGGAATAGGTAGTAAGTaGACTCATGATGGAATAGAA +
Preference number: 4 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYGIGSK*THDGIE
Trigger: TTCTATTCCATCATGAGTCCACTTACTACCTATTCC...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CAA 72 bp CAGAACACAGCCCCTAGAAAACCTAGCTTGTACAGTTaGCACATAGCATGCTGTCTTCAAAGACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: QNTAPRKPSLYS*HIACCLQRPCT
Trigger: TGTGCAGGGTCTTTGAAGACAGCATGCTATGTGCAAACTGTACAAGCTAGGTTTTCTAGGGGCTGTGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR CAA 72 bp GTGAAGATCCATCCGAAAAGGGTGAGGTACCACTGCTaGAAATATGAATCCCCTAGCCAGTGGTTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: VKIHPKRVRYHC*KYESPSQWFSN
Trigger: GTTTGAGAACCACTGGCTAGGGGATTCATATTTCAAGCAGTGGTACCTCACCCTTTTCGGATGGATCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATCTGAGAGAAGCACAGTaGCACATCCTTGATGGTTAC +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHLREAQ*HILDGY
Trigger: GTAACCATCAAGGATGTGTCACTGTGCTTCTCTCAG...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCCCAGTGTGTGTTTGTTaGTGCCTGGCAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSPVCVC*CLARWE
Trigger: TTCCCACCTTGCCAGGCATCAACAAACACACACTGG...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCTATGTGCCTCTTGCCTaGAATCAACAAGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCYVPLA*NQQETA
Trigger: AGCTGTTTCTTGTTGATTTCAGGCAAGAGGCACATA...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCTTACCCTGCAGCAGCTaGAAAGCTAAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSLPCSS*KAKPQP
Trigger: TGGCTGTGGCTTAGCTTTTCAGCTGCTGCAGGGTAA...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACGGAACTCCCTTTCTTTaGAGGCAGTTTAGGGATTCC +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENGTPFL*RQFRDS
Trigger: GGAATCCCTAAACTGCCTTCAAAGAAAGGGAGTTCC...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATATACAAAGGCAGCAGTaGTGGGACCACAGGAGACGC +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNIQRQQ*WDHRRR
Trigger: GCGTCTCCTGTGGTCCCATCACTGCTGCCTTTGTAT...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448928.7
CDS-3UTR TCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGGGAAATAGGAAACAGTaGTTTGATTGCAGGAATGTT +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRGNRKQ*FDCRNV
Trigger: AACATTCCTGCAATCAAATCACTGTTTCCTATTTCC...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTCCCAGCTCTCATCATaGTCCGGGTTCCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSSQLSS*SGFQRT
Trigger: TGTTCTCTGGAACCCGGAGCATGATGAGAGCTGGGA...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTGTCTCACAAGGTGGTaGCTTCGGCCAAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSCLTRW*LRPKLF
Trigger: GAAGAGCTTTGGCCGAAGGCACCACCTTGTGAGACA...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACGCTAAACTAAATTGGTaGAATTCACTTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDAKLNW*NSLPLA
Trigger: GGCAAGAGGAAGTGAATTGCACCAATTTAGTTTAGC...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATCCCACTCCCATTCAGTaGATGCATCCTAATTCAGAG +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHPTPIQ*MHPNSE
Trigger: CTCTGAATTAGGATGCATGCACTGAATGGGAGTGGG...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCCCCAAGTATCCTCAGTaGCCATATTGGAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSPKYPQ*PYWKPQ
Trigger: CTGGGGCTTCCAATATGGGCACTGAGGATACTTGGG...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTGGTACTGTTCTCCATaGCCGCTCTTCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNWYCSP*PLFLAS
Trigger: GGAAGCCAGGAAGAGCGGCCATGGAGAACAGTACCA...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCAACTGTTTCCCACACTaGGGGCATGTGTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSNCFPH*GHVWGL
Trigger: AAGACCCCACACATGCCCCCAGTGTGGGAAACAGTT...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAAAATAGAACCTTCAGTTaGGTCTACTGCAGAAATTTT +
Preference number: 4 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGENRTFS*VYCRNF
Trigger: AAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATT...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGAGATGGAAAGAACTaGCCTTCTGGCCTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENRDGKN*PSGLCR
Trigger: CCTACAAAGGCCAGAAGGCCAGTTCTTTCCATCTCT...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAAATCCTAATTCAGAGATaGAAAGAACTGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LAQRPNFESHSLVWLTREILIQR*KELAFW
Trigger: CCAGAAGGCCAGTTCTTTCCATCTCTGAATTAGGAT...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGGAATCCCCTAGCCAGTaGTTCTCAAACTTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRESPSQ*FSNFSL
Trigger: CAAGCTAAAGTTTGAGAACCACTGGCTAGGGGATTC...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCTGGTGGGGGAGGGCTTaGCTGAAGAACACACTGAGA +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQAWWGRA*LKNTLR
Trigger: TCTCAGTGTGTTCTTCAGCCAAGCCCTCCCCCACCA...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTCTCTGAGGCAGAGGAGGGATTAAACGAACATGGAATGATGATGTCCCGAACTGGGATTAAACGAACATaGAATGATGATGTCCCGAAC +
Preference number: 4 (lower is better)
Translates to: LSEAEEGLNEHGMMMSRTGIKRT*NDDVPN
Trigger: GTTCGGGACATCATCATTCCATGTTCGTTTAATCCC...AGTTCGGGACATCATCATTCCATGTTCGTTTAATCCCTCCTCTGCCTCAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546874.1
3UTR CAA 72 bp GTCTCCTATGCAAGGGATTCTTTGAAAGATACTATGTaGGGGTGGAAAGGGGAGGATACTCAGAATAGGGTG +
Preference number: 4 (lower is better)
Translates to: VSYARDSLKDTM*GWKGEDTQNRV
Trigger: CACCCTATTCTGAGTATCCTCCCCTTTCCACCCCAACATAGTATCTTTCAAAGAATCCCTTGCATAGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCCGCTGCTGTCTGTTCTaGAAGCATTTCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSRCCLF*KHFCCR
Trigger: TCTGCAGCAGAAATGCTTTCAGAACAGACAGCAGCG...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATCAGCTGTACATTCATTaGTTCCCATCCTGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDQLYIH*FPSCPQ
Trigger: CTGGGGACAGGATGGGAATCAATGAATGTACAGCTG...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATCCAGTGTGTGTTTGTTaGTGCCTGGCAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNPVCVC*CLARWE
Trigger: TTCCCACCTTGCCAGGCATCAACAAACACACACTGG...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCTTGAGTCCAGGACTCTaGGGAGCTGTGATTCACCCA +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQALSPGL*GAVIHP
Trigger: TGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAA...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCGCATTCCAGGAAGAATaGAGGAAGAAGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSAFQEE*RKKEGC
Trigger: GCAGCCTTCCTTCTTCCTTCATTCTTCCTGGAATGC...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACCCATCCTTATACCACTaGTGCCTCTGGTACCTTAAT +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENPSLYH*CLWYLN
Trigger: ATTAAGGTACCAGAGGCATCAGTGGTATAAGGATGG...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACGTGGTAAGTATGAATTaGCCCCTGCTTAGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENVVSMN*PLLSRL
Trigger: AAGCCTACTAAGCAGGGGTCAATTCATACTTACCAC...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGCTGTGGGAGTGTGTATaGGAAAGGGGCAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLLWECV*ERGRVV
Trigger: CACCACTCTGCCCCTTTCTCATACACACTCCCACAG...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTTCCCAGCTCTCATCATaGTCCGGGTTCCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTSQLSS*SGFQRT
Trigger: TGTTCTCTGGAACCCGGAGCATGATGAGAGCTGGGA...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCGCATTCCTCTGGAGCTaGTGGGCATGGAATCCCAGC +
Preference number: 4 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFAFLWS*WAWNPS
Trigger: GCTGGGATTCCATGCCCAGCAGCTCCAGAGGAATGC...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTGGGAATCCATCTCTGTaGTACACAGCAGGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCGNPSL*YTAGLR
Trigger: TCTCAAACCTGCTGTGTAGCACAGAGATGGATTCCC...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCCACACTCAGAGCACCTaGTGGTCTTGTCATGTAGGT +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSHTQST*WSCHVG
Trigger: ACCTACATGACAAGACCAGCAGGTGCTCTGAGTGTG...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATGCAGGATTTGCCTTCTaGATGCACTCTCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNAGFAF*MHSLVA
Trigger: AGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGC...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTCAACCTCTTGGCCTTTaGAGGATTTGCCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCQPLGL*RICLLH
Trigger: ATGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTG...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGTTTGCACATAGCATaGTGTCTTCAAAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENSLHIA*CLQRPC
Trigger: GCAGGGTCTTTGAAGACAGCATGCTATGTGCAAACT...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAATCCCTAACCCCGAACTaGTCTTACATACAAGATAAT +
Preference number: 4 (lower is better)
Translates to: LAQRPNFESHSLVWLTRESLTPN*SYIQDN
Trigger: ATTATCTTGTATGTAAGAGCAGTTCGGGGTTAGGGA...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACCAATTCACTTCCTCTTaGCTCTCTGGTTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENQFTSS*LSGSFH
Trigger: GTGGAATGAACCAGAGAGGCAAGAGGAAGTGAATTG...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCGCTAAACTAAATTGGTaGAATTCACTTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCAKLNW*NSLPLA
Trigger: GGCAAGAGGAAGTGAATTGCACCAATTTAGTTTAGC...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCATAAGCAAGAGAACTaGATTCCAGGAAGAATGAAG +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFHKQEN*IPGRMK
Trigger: CTTCATTCTTCCTGGAATGCAGTTCTCTTGCTTATG...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGATATTTAGTGACCCTTaGCTTCTAATTCTTGACACA +
Preference number: 4 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRIFSDP*LLILDT
Trigger: TGTGTCAAGAATTAGAAGGCAAGGGTCACTAAATAT...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTCAGGAGCTTGGTAGTTaGCCCACCATAGTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCQELGS*PTIVSD
Trigger: ATCAGAAACTATGGTGGGGCAACTACCAAGCTCCTG...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACGTTGGAGAGAACAAATaGCCTTGGAAGGGCATGTTA +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENVGENK*PWKGML
Trigger: TAACATGCCCTTCCAAGGGCATTTGTTCTCTCCAAC...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTTCTTCTTGTCACAGTaGCCCTGGAAAGGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: NPILSYSLGHLLILILKCFFLSQ*PWKGSD
Trigger: ATCTGACCCTTTCCAGGGGCACTGTGACAAGAAGAA...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS-3UTR CCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCCTCCTGAAGGGACTGTaGCTCCTCTTCAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQALLKGL*LLFKVT
Trigger: TGTGACCTTGAAGAGGAGCCACAGTCCCTTCAGGAG...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGCAGAGGAGGGATTAAACGAACATGGAATGATGATGTCCCGAACTGTGAAGGAAAAGCATGTCCAGTTTaGGAATTGGAAATCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GRGGIKRTWNDDVPNCEGKACPV*ELEISE
Trigger: CTCTGAGATTTCCAATTCCCAAACTGGACATGCTTT...TCCTTCACAGTTCGGGACATCATCATTCCATGTTCGTTTAATCCCTCCTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546874.1
CDS-3UTR CCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGCACTGGGGGCATGTGTaGGGTCTTAACAGGGAATCC +
Preference number: 4 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLHWGHV*GLNRES
Trigger: GGATTCCCTGTTAAGACCCCACACATGCCCCCAGTG...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCACTCAGAGCACCTGCTaGTCTTGTCATGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQATQSTC*SCHVGG
Trigger: CCCACCTACATGACAAGACCAGCAGGTGCTCTGAGT...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTTGGTGGCTGGCCAGATaGGAGTTGCATCGGAAATTC +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTWWLAR*ELHRKF
Trigger: GAATTTCCGATGCAACTCCCATCTGGCCAGCCACCA...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCGCATGCACTCTCTGGTaGCTGGCCAGATGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFACTLW*LARWEL
Trigger: CAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGC...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCCTCTCTCCAACCTCTTaGCCTTTGCAGGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSLSPTS*PLQDLP
Trigger: AGGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAG...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCCTCTCTCCAACCTCTTaGCCTTTGCAGGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSLSPTS*PLQDLP
Trigger: AGGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAG...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCTATGATTCTGGCCACTaGGGTTCAGGAGAACGGCAG +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQAYDSGH*GSGERQ
Trigger: CTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATA...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACTTCCTCTTGCCTCTCTaGTTCATTCCACCAATTGTG +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENFLLPL*FIPPIV
Trigger: CACAATTGGTGGAATGAACCAGAGAGGCAAGAGGAA...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATATGATGCCTTTCAGCTaGGTGCTATACTTGCACCTA +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHMMPFS*VLYLHL
Trigger: TAGGTGCAAGTATAGCACCCAGCTGAAAGGCATCAT...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACAGCCACAGTTTGGTATaGCTCACAAGGGAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RTNALGRACYCSVRTKQNSHSLV*LTREKR
Trigger: CCTCTTTTCCCTTGTGAGCCATACCAAACTGTGGCT...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCTTGAGAGCCACAGTTTaGTATGGCTCACAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVLRATV*YGSQGK
Trigger: TTTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAA...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATGGGTTCTTAAGGGCTTaGCATGGTAGGCCTTACTCT +
Preference number: 4 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDGFLRA*HGRPYS
Trigger: AGAGTAAGGCCTACCATGCCAAGCCCTTAAGAACCC...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCGGGTTCTTAAGGGCTTaGCATGGTAGGCCTTACTCT +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSGFLRA*HGRPYS
Trigger: AGAGTAAGGCCTACCATGCCAAGCCCTTAAGAACCC...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGTCCATGGCCCCTCGTTaGTCTCTAATCCAATTTTTA +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRSMAPR*SLIQFL
Trigger: TAAAAATTGGATTAGAGACCAACGAGGGGCCATGGA...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACGCCAAGCCAAGAATTTaGAGGATGAGAGTGGTAAGT +
Preference number: 4 (lower is better)
Translates to: QSEWISAINCQYHSPLENAKPRI*RMRVVS
Trigger: ACTTACCACTCTCATCCTCCAAATTCTTGGCTTGGC...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTATCCCCAAAGTTTCCTaGAAGAGGATGCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTIPKVS*KRMPRC
Trigger: GCACCTGGGCATCCTCTTCCAGGAAACTTTGGGGAT...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CAA 72 bp AAGAAAGTCTCAGCCTTGGGGTCTAATCTTTTGACCTaGGAGAAGACCTGTGGGCAGATTTATAACTGTCAG +
Preference number: 4 (lower is better)
Translates to: KKVSALGSNLLT*EKTCGQIYNCQ
Trigger: CTGACAGTTATAAATCTGCCCACAGGTCTTCTCCAAGGTCAAAAGATTAGACCCCAAGGCTGAGACTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
3UTR CAA 72 bp TCTTTTATTCAACTGACAGGGACCATAAGTCCCCTGTaGGGTAACCCAAGGAAGTTCACAGTTCATCAGAAG +
Preference number: 4 (lower is better)
Translates to: SFIQLTGTISPL*GNPRKFTVHQK
Trigger: CTTCTGATGAACTGTGAACTTCCTTGGGTTACCCAACAGGGGACTTATGGTCCCTGTCAGTTGAATAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCTGCAGACCCAAATTGTaGCCTGTCCTCAGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQACRPKL*PVLSLH
Trigger: ATGCAAGCTGAGGACAGGTCACAATTTGGGTCTGCA...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301042.7
ENST00000544117.6
CDS-3UTR TCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATCGCTGCTGTCTGTTCTaGAAGCATTTCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNRCCLF*KHFCCR
Trigger: TCTGCAGCAGAAATGCTTTCAGAACAGACAGCAGCG...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCCTGAGAGAAGCACAGTaGCACATCCTTGATGGTTAC +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSLREAQ*HILDGY
Trigger: GTAACCATCAAGGATGTGTCACTGTGCTTCTCTCAG...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTTGGATTTCACTTTTCTaGTATTGCCCAGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTWISLF*YCPAPP
Trigger: GGGTGGGGCTGGGCAATATCAGAAAAGTGAAATCCA...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTAAACAAGTTTCCAGGTaGTATTTATGCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCKQVSR*YLCCWP
Trigger: GGGCCAGCAGCATAAATATCACCTGGAAACTTGTTT...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCGATTTGCCTTCTGCATaGACTCTCTGGTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFDLPSA*TLWWLA
Trigger: GGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATC...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATGGCCTTTGCAGGATTTaGCTTCTGCATGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNGLCRI*LLHALS
Trigger: AGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCC...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGGCCTTTGCAGGATTTaGCTTCTGCATGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTGLCRI*LLHALS
Trigger: AGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCC...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCTCTTCCCACATTCAGTaGACACGTGACACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSSSHIQ*TRDTLA
Trigger: TGCCAAAGTGTCACGTGTGCACTGAATGTGGGAAGA...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGTTCAGTTGGGTCTACTaGAGAAATTTTCAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRFSWVY*RNFQSL
Trigger: AAGGCTCTGAAAATTTCTGCAGTAGACCCAACTGAA...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCAAAGGGGGCTCTGGATaGCTGATCACTATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSKGGSG*LITISC
Trigger: ACAAGAGATAGTGATCAGGCATCCAGAGCCCCCTTT...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTAGTTTGCACATAGCATaGTGTCTTCAAAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCSLHIA*CLQRPC
Trigger: GCAGGGTCTTTGAAGACAGCATGCTATGTGCAAACT...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCAGGGCAAAAGCAATCTaGAGCCCAGAGATTCAAACC +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSRAKAI*SPEIQT
Trigger: GGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCT...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTTTTCTATGTGCCTCTTaGCTGAAATCAACAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFFLCAS*LKSTRN
Trigger: GTTTCTTGTTGATTTCAGGCAAGAGGCACATAGAAA...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCGTGATGGCAACAACTTaGAAACACGTAATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: NPILSYSLGHLLILILKCVMATT*KHVIPA
Trigger: GGCAGGAATTACGTGTTTGCAAGTTGTTGCCATCAC...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCAATAACCCAAAGGATTaGCCCTTCTGTAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSNNPKD*PFCRRP
Trigger: GGGCCTTCTACAGAAGGGGCAATCCTTTGGGTTATT...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCATGCCCACTGCAGTGTaGGTTCTAGGGCTTTCATTT +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSMPTAV*VLGLSF
Trigger: AAATGAAAGCCCTAGAACCCACACTGCAGTGGGCAT...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301042.7
ENST00000544117.6
CDS-3UTR CCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATGTCCAGTTTGGGAATTaGAAATCTCAGAGAGACTAC +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHVQFGN*KSQRDY
Trigger: GTAGTCTCTCTGAGATTTCCAATTCCCAAACTGGAC...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCCGCTGGATAACATTCTaGGAGGTTCTGCTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: NPILSYSLGHLLILILKCRWITF*EVLLLV
Trigger: AACTAGAAGCAGAACCTCCCAGAATGTTATCCAGCG...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCGTGTTTGTTGATGCCTaGCAAGGTGGGAACCCCATA +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQAVFVDA*QGGNPI
Trigger: TATGGGGTTCCCACCTTGCCAGGCATCAACAAACAC...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTGTCGCTAAACTAAATTaGTGCAATTCACTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFVAKLN*CNSLPL
Trigger: AAGAGGAAGTGAATTGCACCAATTTAGTTTAGCGAC...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATCAAGAGAGGTGGTGTTaGACCGAGGTAGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNQERWC*TEVEKT
Trigger: TGTCTTCTCTACCTCGGTCCAACACCACCTCTCTTG...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGGAGGCTGATTCCCTGTaGGAAAAATCATTCAAATCT +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRREADSL*EKSFKS
Trigger: AGATTTGAATGATTTTTCCCACAGGGAATCAGCCTC...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCATCCTAATTCAGAGATaGAAAGAACTGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVILIQR*KELAFW
Trigger: CCAGAAGGCCAGTTCTTTCCATCTCTGAATTAGGAT...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGTTATGTTGGAAAACTTaGGTTCTTAAGGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRLCWKT*VLKGLA
Trigger: TGCCAAGCCCTTAAGAACCCAAGTTTTCCAACATAA...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCGGGTATGCCAAATCATaGTTAGAAATCCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVGYAKS*LEIPSM
Trigger: CATGGAAGGGATTTCTAACCATGATTTGGCATACCC...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCGAGAACAAATGCCCTTaGAAGGGCATGTTATTGCTC +
Preference number: 4 (lower is better)
Translates to: NPILSYSLGHLLILILKCENKCP*KGMLLL
Trigger: GAGCAATAACATGCCCTTCCAAGGGCATTTGTTCTC...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTCTTAGCCTTGTAGTGTaGTCTCTCAGCTGGATATAT +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCLSLVV*SLSWIY
Trigger: ATATATCCAGCTGAGAGATCACACTACAAGGCTAAG...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGGACTCTGAGGAGCTGTaGTTCACCCAGTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLDSEEL*FTQFFL
Trigger: CAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTC...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGGCATTCCAGGAAGAATaGAGGAAGAAGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLAFQEE*RKKEGC
Trigger: GCAGCCTTCCTTCTTCCTTCATTCTTCCTGGAATGC...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATCCATCCTTATACCACTaGTGCCTCTGGTACCTTAAT +
Preference number: 4 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDPSLYH*CLWYLN
Trigger: ATTAAGGTACCAGAGGCATCAGTGGTATAAGGATGG...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTTTCCTCCCCACAGCCTaGATCTGTCAGAATCTTCTA +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTFLPTA*ICQNLL
Trigger: TAGAAGATTCTGACAGATTCAGGCTGTGGGGAGGAA...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTTGGGGTCTAATCTTTTaGCCTTGGAGAAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTWGLIF*PWRRPV
Trigger: CACAGGTCTTCTCCAAGGTCAAAAGATTAGACCCCA...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTTGGCCAGATGGGAGTTaGATCGGAAATTCTTACCAC +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTWPDGS*IGNSYH
Trigger: GTGGTAAGAATTTCCGATGCAACTCCCATCTGGCCA...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCTCTTCCCACATTCAGTaGACACGTGACACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQASSHIQ*TRDTLA
Trigger: TGCCAAAGTGTCACGTGTGCACTGAATGTGGGAAGA...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATAAATGCTCTGGCCATTaGTGGGACCTCATCTTTCTA +
Preference number: 4 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDKCSGH*WDLIFL
Trigger: TAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTT...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTACATTTAGGAAACACTaGCTTAATAGAACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFTFRKH*LNRTFS
Trigger: ACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATAAAGGGGGCTCTGGATaGCTGATCACTATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNKGGSG*LITISC
Trigger: ACAAGAGATAGTGATCAGGCATCCAGAGCCCCCTTT...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCCTGGATATATGTATGTaGAGGATGAAGGGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: NPILSYSLGHLLILILKCLDICM*RMKGVG
Trigger: TCCTACTCCCTTCATCCTGCACATACATATATCCAG...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCCAAACACGTAATTCCTaGCCTAATTTTCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVQTRNS*PNFPAL
Trigger: AAGTGCTGGAAAATTAGGGCAGGAATTACGTGTTTG...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCCAATTCACTTCCTCTTaGCTCTCTGGTTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSQFTSS*LSGSFH
Trigger: GTGGAATGAACCAGAGAGGCAAGAGGAAGTGAATTG...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTAAAGACCAGCCATTTTaGCTTATTCATAGGATCATA +
Preference number: 4 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFKDQPF*LIHRII
Trigger: TATGATCCTATGAATAAGGCAAAATGGCTGGTCTTT...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGTACCTTTGTGCTAGATaGCCACTCCACCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLYLCAR*PLHLPL
Trigger: AAGAGGCAGGTGGAGTGGGCATCTAGCACAAAGGTA...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGGTGTTTGTTGATGCCTaGCAAGGTGGGAACCCCATA +
Preference number: 4 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLVFVDA*QGGNPI
Trigger: TATGGGGTTCCCACCTTGCCAGGCATCAACAAACAC...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTTAAGGGTCTTAGTGTaGACACCTTTCCAGAATTGG +
Preference number: 4 (lower is better)
Translates to: NPILSYSLGHLLILILKCLRVLV*TPFQNW
Trigger: CCAATTCTGGAAAGGTGTCCACACTAAGACCCTTAA...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTAGCCACAGTTTGGTATaGCTCACAAGGGAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTSHSLV*LTREKR
Trigger: CCTCTTTTCCCTTGTGAGCCATACCAAACTGTGGCT...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTTTTTCTTCACACATATaGGTAGCAAGGGACCTGCAA +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCFSSHI*VARDLQ
Trigger: TTGCAGGTCCCTTGCTACCCATATGTGTGAAGAAAA...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS-3UTR CCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCTTGTCACAGTGCCCCTaGAAAGGGTCAGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQALSQCP*KGSDFR
Trigger: TCTGAAATCTGACCCTTTCCAGGGGCACTGTGACAA...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS-3UTR TCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGCTGAGAGAAGCACAGTaGCACATCCTTGATGGTTAC +
Preference number: 4 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLLREAQ*HILDGY
Trigger: GTAACCATCAAGGATGTGTCACTGTGCTTCTCTCAG...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCAACTCATCAATGGGCTaGTGCGAAAGCAATACAAAG +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSNSSMG*CESNTK
Trigger: CTTTGTATTGCTTTCGCATCAGCCCATTGATGAGTT...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448928.7
CDS-3UTR TCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCCCAAAGACCAAATTTTaGGAGCCACAGTTTGGTATG +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSPKTKF*EPQFGM
Trigger: CATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGG...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCGTGGTAAGTATGAATTaGCCCCTGCTTAGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQAVVSMN*PLLSRL
Trigger: AAGCCTACTAAGCAGGGGTCAATTCATACTTACCAC...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCCACACTCAGAGCACCTaGTGGTCTTGTCATGTAGGT +
Preference number: 4 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFHTQST*WSCHVG
Trigger: ACCTACATGACAAGACCAGCAGGTGCTCTGAGTGTG...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTAAATGCTCTGGCCATTaGTGGGACCTCATCTTTCTA +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTKCSGH*WDLIFL
Trigger: TAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTT...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACTTCAGTTGGGTCTACTaGAGAAATTTTCAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RTNALGRACYCSVRTKQNFSWVY*RNFQSL
Trigger: AAGGCTCTGAAAATTTCTGCAGTAGACCCAACTGAA...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCCTGGATATATGTATGTaGAGGATGAAGGGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSLDICM*RMKGVG
Trigger: TCCTACTCCCTTCATCCTGCACATACATATATCCAG...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTCAAACACGTAATTCCTaGCCTAATTTTCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCQTRNS*PNFPAL
Trigger: AAGTGCTGGAAAATTAGGGCAGGAATTACGTGTTTG...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCGAAAATATCCCACTTTaGTCCTCTTCCTCCCTAACC +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQAENIPL*SSSSLT
Trigger: GGTTAGGGAGGAAGAGGAGCAAAGTGGGATATTTTC...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTCAATTCACTTCCTCTTaGCTCTCTGGTTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTQFTSS*LSGSFH
Trigger: GTGGAATGAACCAGAGAGGCAAGAGGAAGTGAATTG...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCCATAAGCAAGAGAACTaGATTCCAGGAAGAATGAAG +
Preference number: 4 (lower is better)
Translates to: NPILSYSLGHLLILILKCHKQEN*IPGRMK
Trigger: CTTCATTCTTCCTGGAATGCAGTTCTCTTGCTTATG...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACCAGGTTCTGAACCATTaGTTATGCAGAGCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: RTNALGRACYCSVRTKQNQVLNH*LCRAFS
Trigger: ACTAAAAGCTCTGCATAAGCAATGGTTCAGAACCTG...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACCTTGCCCATAGGGTATaGCAAATCATGGTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: RTNALGRACYCSVRTKQNLAHRV*QIMVRN
Trigger: ATTTCTAACCATGATTTGGCATACCCTATGGGCAAG...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCGTATATACTGCTGATTaGCATAAGGAAGACAGACCC +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSVYTAD*HKEDRP
Trigger: GGGTCTGTCTTCCTTATGCCAATCAGCAGTATATAC...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCATGATGCCTTTCAGCTaGGTGCTATACTTGCACCTA +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQAMMPFS*VLYLHL
Trigger: TAGGTGCAAGTATAGCACCCAGCTGAAAGGCATCAT...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATGTCCTTTCAGATTTCTaGACCCAAGTATCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNVLSDF*TQVSSV
Trigger: CACTGAGGATACTTGGGTCCAGAAATCTGAAAGGAC...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATGAGAACAAATGCCCTTaGAAGGGCATGTTATTGCTC +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNENKCP*KGMLLL
Trigger: GAGCAATAACATGCCCTTCCAAGGGCATTTGTTCTC...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCTATGTGCCTCTTGCCTaGAATCAACAAGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQAYVPLA*NQQETA
Trigger: AGCTGTTTCTTGTTGATTTCAGGCAAGAGGCACATA...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTGTCCAGATTTATCACTaGACCCAATACTTTCTTACT +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCVQIYH*TQYFLT
Trigger: AGTAAGAAAGTATTGGGTTCAGTGATAAATCTGGAC...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCATCTATTCACTCATCTaGTGGCTGTTGCTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: NPILSYSLGHLLILILKCIYSLI*WLLLVL
Trigger: TAAAACAAGCAACAGCCATCAGATGAGTGAATAGAT...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATACTTTGGAAGTTACCTaGTTGGAAGAAGAACCTCTA +
Preference number: 4 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDTLEVT*LEEEPL
Trigger: TAGAGGTTCTTCTTCCAATCAGGTAACTTCCAAAGT...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTTCAGCCCATGTAGGATaGATTGCTTCCCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTSAHVG*IASQKF
Trigger: AAACTTTTGGGAAGCAATGCATCCTACATGGGCTGA...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATATTTCAGCCATAAACTaGCAGTACCACTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNISAIN*QYHSPL
Trigger: AAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAAT...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATACATTTAGGAAACACTaGCTTAATAGAACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHTFRKH*LNRTFS
Trigger: ACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTTTTCTATGTGCCTCTTaGCTGAAATCAACAAGAAAC +
Preference number: 4 (lower is better)
Translates to: ILSYSLGHLLILILKCSCFLCAS*LKSTRN
Trigger: GTTTCTTGTTGATTTCAGGCAAGAGGCACATAGAAA...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGGTGATGGCAACAACTTaGAAACACGTAATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLVMATT*KHVIPA
Trigger: GGCAGGAATTACGTGTTTGCAAGTTGTTGCCATCAC...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATGGAAGGGCATGTTATTaGTCAGTCAGAACAAAGCAA +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNGRACY*SVRTKQ
Trigger: TTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCC...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TCAAATCCACAAAGTGCCTGCTACATCATTCTATTACACTCCCTTGCTTTTGAAGTCCAGTTTGGGAATTaGAAATCTCAGAGAGACTAC +
Preference number: 4 (lower is better)
Translates to: SNPQSACYIILLHSLAFEVQFGN*KSQRDY
Trigger: GTAGTCTCTCTGAGATTTCCAATTCCCAAACTGGAC...TTCAAAAGCAAGGGAGTGTAATAGAATGATGTAGCAGGCACTTTGTGGATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546874.1
CDS-3UTR CCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTTTAAGGGTCTTAGTGTaGACACCTTTCCAGAATTGG +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTLRVLV*TPFQNW
Trigger: CCAATTCTGGAAAGGTGTCCACACTAAGACCCTTAA...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATAGATTTGTGAGGAGCTaGATTTGTCAGCATGTCAGA +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNRFVRS*ICQHVR
Trigger: TCTGACATGCTGACAAATCCAGCTCCTCACAAATCT...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCAGATTTGTGAGGAGCTaGATTTGTCAGCATGTCAGA +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQARFVRS*ICQHVR
Trigger: TCTGACATGCTGACAAATCCAGCTCCTCACAAATCT...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCGAGGCTGATTCCCTGTaGGAAAAATCATTCAAATCT +
Preference number: 4 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSEADSL*EKSFKS
Trigger: AGATTTGAATGATTTTTCCCACAGGGAATCAGCCTC...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTATGTTGGAAAACTTaGGTTCTTAAGGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSLCWKT*VLKGLA
Trigger: TGCCAAGCCCTTAAGAACCCAAGTTTTCCAACATAA...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGGGTATGCCAAATCATaGTTAGAAATCCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTGYAKS*LEIPSM
Trigger: CATGGAAGGGATTTCTAACCATGATTTGGCATACCC...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCAGAGATAAACTAGAATaGAAGAAGGAATGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSRDKLE*KKEWGL
Trigger: CAACCCCCATTCCTTCTTCCATTCTAGTTTATCTCT...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCGGAATAGGTAGTAAGTaGACTCATGATGGAATAGAA +
Preference number: 4 (lower is better)
Translates to: NPILSYSLGHLLILILKCGIGSK*THDGIE
Trigger: TTCTATTCCATCATGAGTCCACTTACTACCTATTCC...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATGAAATTGCCAGTGCCTaGCACATAATAAGGACACAA +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNEIASA*HIIRTQ
Trigger: TTGTGTCCTTATTATGTGCCAGGCACTGGCAATTTC...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCTCTCCTCCTTCTAGTTaGGAAAGCATGTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFSPPSS*ESMSSL
Trigger: CAAACTGGACATGCTTTCTCAACTAGAAGGAGGAGA...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCCCATCCTTATACCACTaGTGCCTCTGGTACCTTAAT +
Preference number: 4 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFPSLYH*CLWYLN
Trigger: ATTAAGGTACCAGAGGCATCAGTGGTATAAGGATGG...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATATCTATTCACTCATCTaGTGGCTGTTGCTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDIYSLI*WLLLVL
Trigger: TAAAACAAGCAACAGCCATCAGATGAGTGAATAGAT...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCGGAAATAGGAAACAGTaGTTTGATTGCAGGAATGTT +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSGNRKQ*FDCRNV
Trigger: AACATTCCTGCAATCAAATCACTGTTTCCTATTTCC...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCACTTTGGAAGTTACCTaGTTGGAAGAAGAACCTCTA +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQATLEVT*LEEEPL
Trigger: TAGAGGTTCTTCTTCCAATCAGGTAACTTCCAAAGT...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTTTCAGTTGGGTCTACTaGAGAAATTTTCAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTFSWVY*RNFQSL
Trigger: AAGGCTCTGAAAATTTCTGCAGTAGACCCAACTGAA...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTCCCTAACCCCGAACTaGTCTTACATACAAGATAAT +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNSLTPN*SYIQDN
Trigger: ATTATCTTGTATGTAAGAGCAGTTCGGGGTTAGGGA...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCGAAAATATCCCACTTTaGTCCTCTTCCTCCCTAACC +
Preference number: 4 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFENIPL*SSSSLT
Trigger: GGTTAGGGAGGAAGAGGAGCAAAGTGGGATATTTTC...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACAAAGACCAGCCATTTTaGCTTATTCATAGGATCATA +
Preference number: 4 (lower is better)
Translates to: RTNALGRACYCSVRTKQNKDQPF*LIHRII
Trigger: TATGATCCTATGAATAAGGCAAAATGGCTGGTCTTT...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCCAGGTTCTGAACCATTaGTTATGCAGAGCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQAQVLNH*LCRAFS
Trigger: ACTAAAAGCTCTGCATAAGCAATGGTTCAGAACCTG...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTCAGGTTCTGAACCATTaGTTATGCAGAGCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTQVLNH*LCRAFS
Trigger: ACTAAAAGCTCTGCATAAGCAATGGTTCAGAACCTG...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCCTTGCCCATAGGGTATaGCAAATCATGGTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQALAHRV*QIMVRN
Trigger: ATTTCTAACCATGATTTGGCATACCCTATGGGCAAG...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCGAGGCTGATTCCCTGTaGGAAAAATCATTCAAATCT +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQAEADSL*EKSFKS
Trigger: AGATTTGAATGATTTTTCCCACAGGGAATCAGCCTC...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTATACTCAGAATAGGGTaGAGGTACCAGATGGAAAAA +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTILRIG*RYQMEK
Trigger: TTTTTCCATCTGGTACCTCCACCCTATTCTGAGTAT...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTAGAGATAAACTAGAATaGAAGAAGGAATGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTRDKLE*KKEWGL
Trigger: CAACCCCCATTCCTTCTTCCATTCTAGTTTATCTCT...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATGTCCAGATTTATCACTaGACCCAATACTTTCTTACT +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNVQIYH*TQYFLT
Trigger: AGTAAGAAAGTATTGGGTTCAGTGATAAATCTGGAC...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR TCA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCATCTATTCACTCATCTaGTGGCTGTTGCTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: RETMTNSLANDARILMQAIYSLI*WLLLVL
Trigger: TAAAACAAGCAACAGCCATCAGATGAGTGAATAGAT...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCATTTCAGCCATAAACTaGCAGTACCACTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFISAIN*QYHSPL
Trigger: AAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAAT...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGTTCAGTTGGGTCTACTaGAGAAATTTTCAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLFSWVY*RNFQSL
Trigger: AAGGCTCTGAAAATTTCTGCAGTAGACCCAACTGAA...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCATATTTAGTGACCCTTaGCTTCTAATTCTTGACACA +
Preference number: 4 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSIFSDP*LLILDT
Trigger: TGTGTCAAGAATTAGAAGGCAAGGGTCACTAAATAT...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGTCGCTAAACTAAATTaGTGCAATTCACTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTVAKLN*CNSLPL
Trigger: AAGAGGAAGTGAATTGCACCAATTTAGTTTAGCGAC...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
3UTR CAA 72 bp ATGGAAATAGGAAACAGTGATTTGATTGCAGGAATGTaGGAAAGGGAGGAATTTTGTCCCAAATTATCACCT +
Preference number: 4 (lower is better)
Translates to: MEIGNSDLIAGM*EREEFCPKLSP
Trigger: AGGTGATAATTTGGGACAAAATTCCTCCCTTTCCAACATTCCTGCAATCAAATCACTGTTTCCTATTTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTACATTTAGGAAACACTaGCTTAATAGAACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTTFRKH*LNRTFS
Trigger: ACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATAAAGACCAGCCATTTTaGCTTATTCATAGGATCATA +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNKDQPF*LIHRII
Trigger: TATGATCCTATGAATAAGGCAAAATGGCTGGTCTTT...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR GCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCCGGGGGCTAAGAATTTaGATTTCAAACAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFRGLRI*ISNKFP
Trigger: TGGAAACTTGTTTGAAATGCAAATTCTTAGCCCCCG...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATAATAGAACCTTCAGTTaGGTCTACTGCAGAAATTTT +
Preference number: 4 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNNRTFS*VYCRNF
Trigger: AAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATT...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CCA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCGTCGCTAAACTAAATTaGTGCAATTCACTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFVAKLN*CNSLPL
Trigger: AAGAGGAAGTGAATTGCACCAATTTAGTTTAGCGAC...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS CCA 90 bp GCCCAAGGGCACACGGACGAGTTGGCTCCGTCCATCAGAGAACCCTaGCCCCTGCCACGGGTAGGGCATGGGCGGGACGGGAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: AQGHTDELAPSIREP*PLPRVGHGRDGSLL
Trigger: GAGCAGGCTCCCGTCCCGCCCATGCCCTACCCGTGGCAGGGGCCAGGGTTCTCTGATGGACGGAGCCAACTCGTCCGTGTGCCCTTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000550342.1
CDS-3UTR CAA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACGCTGTTCCGGGGACTTaGTCCCTGGTGGGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: GLMILATGVQENGSPGSDAVPGT*SLVGEQ
Trigger: CTGCTCACCCACCAGGGACAAAGTCCCCGGAACAGC...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CCA 90 bp ACTGGGCCTCCCACGGAGTTCTGTCCTCAGGGTTCGTCAATTACCTaGAATTGCGTAACCGCCCGTTACAGGCCAGACCGAGGCCGAGAG +
Preference number: 5 (lower is better)
Translates to: TGPPTEFCPQGSSIT*NCVTARYRPDRGRE
Trigger: CTCTCGGCCTCGGTCTGGCCTGTAACGGGCGGTTACGCAATTCCAGGTAATTGACGAACCCTGAGGACAGAACTCCGTGGGAGGCCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550181.5
CDS-3UTR CAA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCTGTAGAATTGAGAGTTaGGGCTGGGCGCGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: GMGSGLMILATGVQENGSCRIES*GWARWL
Trigger: GAGCCACCGCGCCCAGCCCAAACTCTCAATTCTACA...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS CCA 90 bp CTGTGGCTCCTCTTCAAGGTCACAGCACAGGTGCTCCAGAGGTCCTaGTACTGTTCTCCATGGCCGCTCTTCCTGGCTTCCCCTTTCCAC +
Preference number: 5 (lower is better)
Translates to: LWLLFKVTAQVLQRS*YCSPWPLFLASPFH
Trigger: GTGGAAAGGGGAAGCCAGGAAGAGCGGCCATGGAGAACAGTACCAGGACCTCTGGAGCACCTGTGCTGTGACCTTGAAGAGGAGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
ENST00000548932.5
ENST00000549125.5
ENST00000550181.5
ENST00000550342.1
CDS-3UTR CAA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCAAGAGAGGTGGTGTaGGACCGAGGTAGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: GMGSGLMILATGVQENGSPREVV*DRGRED
Trigger: GTCTTCTCTACCTCGGTCCAACACCACCTCTCTTGG...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS GCA 90 bp GCCAGGGCTCTCTCCAACCTCTTGGCCTTTGCAGGATTTGCCTTCTaGATGCACTCTCTGGTGGCTGGCCAGATGGGAGTTGCATCGGAA +
Preference number: 5 (lower is better)
Translates to: ARALSNLLAFAGFAF*MHSLVAGQMGVASE
Trigger: TTCCGATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAGCCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS GCA 90 bp ACACGTGACACTTTGGCACTGGTGGGGCACGCTGCCGTTTCCTTGTaGCAGGGCTCTCTCCAACCTCTTGGCCTTTGCAGGATTTGCCTT +
Preference number: 5 (lower is better)
Translates to: TRDTLALVGHAAVSL*QGSLQPLGLCRICL
Trigger: AAGGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAGCCCTGGCACAAGGAAACGGCAGCGTGCCCCACCAGTGCCAAAGTGTCACGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS GCA 90 bp CCTCCCACGGAGTTCTGTCCTCAGGGTTCGTCAATTACCTGGAATTaGGTAACCGCCCGTTACAGGCCAGACCGAGGCCGAGAGCGATTT +
Preference number: 5 (lower is better)
Translates to: PPTEFCPQGSSITWN*VTARYRPDRGRERF
Trigger: AAATCGCTCTCGGCCTCGGTCTGGCCTGTAACGGGCGGTTACGCAATTCCAGGTAATTGACGAACCCTGAGGACAGAACTCCGTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550181.5
CDS-3UTR CAA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCCCAGCTGTACATTCATaGATTCCCATCCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: GSGLMILATGVQENGSPGPAVHS*IPILSP
Trigger: TGGGGACAGGATGGGAATCAATGAATGTACAGCTGG...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCATCCCCTCCTGGGGAATaGCAGGAACCCAGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSSPPGE*QEPREQ
Trigger: CTGCTCCCTGGGTTCCTGCAATTCCCCAGGAGGGGA...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACTGGCCTTTGCAGGATTaGCCTTCTGCATGCACTCTC +
Preference number: 5 (lower is better)
Translates to: GLMILATGVQENGSPGSDWPLQD*PSACTL
Trigger: GAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCCA...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCCCAACCTCTTGGCCTTaGCAGGATTTGCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPPTSWP*QDLPSA
Trigger: TGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTGG...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCGCTCTCTCCAACCTCTaGGCCTTTGCAGGATTTGCC +
Preference number: 5 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGALSNL*AFAGFA
Trigger: GGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAGC...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCATGTTCCTGCTGCCCTaGCCCATAGGGTATGCCAAA +
Preference number: 5 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPMFLLP*PIGYAK
Trigger: TTTGGCATACCCTATGGGCAAGGGCAGCAGGAACAT...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATCACGCTGCCGTTTCCTaGTGCCAGGGCTCTCTCCAA +
Preference number: 5 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYHAAVS*CQGSLQ
Trigger: TTGGAGAGAGCCCTGGCACAAGGAAACGGCAGCGTG...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGCACGCTGCCGTTTCCTaGTGCCAGGGCTCTCTCCAA +
Preference number: 5 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEHAAVS*CQGSLQ
Trigger: TTGGAGAGAGCCCTGGCACAAGGAAACGGCAGCGTG...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCACCGGCTGATAGACTaGACCATAGCTGTAGTGGAA +
Preference number: 5 (lower is better)
Translates to: GMGSGLMILATGVQENGSHRLID*TIAVVE
Trigger: TTCCACTACAGCTATGGTCAAGTCTATCAGCCGGTG...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGACAGTACCACTCTCCTCTaGAGAACAGCTCAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: GLMILATGVQENGSPGSDSTTLL*RTAQAE
Trigger: TTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTACT...GTCACTGCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCAGTACCACTCTCCTCTaGAGAACAGCTCAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: GMGSGLMILATGVQENGSSTTLL*RTAQAE
Trigger: TTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTACT...GCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCGAGTGGAAGAAGACCTaGCAACTAAGGGGAATGGAA +
Preference number: 5 (lower is better)
Translates to: GSGLMILATGVQENGSPGEWKKT*QLRGME
Trigger: TTCCATTCCCCTTAGTTGCAAGGTCTTCTTCCACTC...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGGGGCACACGGACGAGTaGGCTCCGTCCATCAGAGAA +
Preference number: 5 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEGHTDE*APSIRE
Trigger: TTCTCTGATGGACGGAGCCAACTCGTCCGTGTGCCC...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS GCA 90 bp GGGCTCTCTCCAACCTCTTGGCCTTTGCAGGATTTGCCTTCTGCATaGACTCTCTGGTGGCTGGCCAGATGGGAGTTGCATCGGAAATTC +
Preference number: 5 (lower is better)
Translates to: GLSPTSWPLQDLPSA*TLWWLARWELHRKF
Trigger: GAATTTCCGATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCCCAGCTGTACATTCATaGATTCCCATCCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGPAVHS*IPILSP
Trigger: TGGGGACAGGATGGGAATCAATGAATGTACAGCTGG...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCGCTGTTCCGGGGACTTaGTCCCTGGTGGGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: WISAINCQYHSPLENSSGAVPGT*SLVGEQ
Trigger: CTGCTCACCCACCAGGGACAAAGTCCCCGGAACAGC...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCAGTGATGGCAACAACTaGCAAACACGTAATTCCTGC +
Preference number: 5 (lower is better)
Translates to: GSGLMILATGVQENGSPGSDGNN*QTRNSC
Trigger: GCAGGAATTACGTGTTTGCAAGTTGTTGCCATCACT...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGGCTTGAAAGATACTATGTaGGGGTGGAAAGGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: GSGLMILATGVQENGSPGLKDTM*GWKGED
Trigger: ATCCTCCCCTTTCCACCCCAACATAGTATCTTTCAA...GCCAGGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCAGCCAAGCCAAGAATTaGGAGGATGAGAGTGGTAAG +
Preference number: 5 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPSQAKN*EDESGK
Trigger: CTTACCACTCTCATCCTCCAAATTCTTGGCTTGGCT...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCGTAGAGGGGCCAGATTaGGCAGTACTAGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSVEGPD*AVLGRG
Trigger: CCCCCTGCCTAGTACTGCCAAATCTGGCCCCTCTAC...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS TCA 90 bp CCAACTCATCAATGGGCTGATGCGAAAGCAATACAAAGGCAGCAGTaGTGGGACCACAGGAGACGCCAAGGGAAGCAGAGCTCACCTGTG +
Preference number: 5 (lower is better)
Translates to: PTHQWADAKAIQRQQ*WDHRRRQGKQSSPV
Trigger: CACAGGTGAGCTCTGCTTCCCTTGGCGTCTCCTGTGGTCCCATCACTGCTGCCTTTGTATTGCTTTCGCATCAGCCCATTGATGAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448928.7
CDS-3UTR CAA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCTCCCCTCCTGGGGAATaGCAGGAACCCAGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCSPPGE*QEPREQ
Trigger: CTGCTCCCTGGGTTCCTGCAATTCCCCAGGAGGGGA...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAAGCTCTCTCCAACCTCTaGGCCTTTGCAGGATTTGCC +
Preference number: 5 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGEALSNL*AFAGFA
Trigger: GGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAGC...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCACCAAGAGAGGTGGTGTaGGACCGAGGTAGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSPREVV*DRGRED
Trigger: GTCTTCTCTACCTCGGTCCAACACCACCTCTCTTGG...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGTCCTCAGTGCCCATATaGGAAGCCCCAGCCCCAATG +
Preference number: 5 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRSSVPI*EAPAPM
Trigger: CATTGGGGCTGGGGCTTCCAATATGGGCACTGAGGA...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCATAGGCACGGAGCAGTaGGGCTGCATGGCAAGTGGG +
Preference number: 5 (lower is better)
Translates to: WISAINCQYHSPLENSSGIGTEQ*GCMASG
Trigger: CCCACTTGCCATGCAGCCCAACTGCTCCGTGCCTAT...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS GCA 90 bp AGCATTCCTCTGGAGCTGCTGGGCATGGAATCCCAGCTCTCATCATaGTCCGGGTTCCAGAGAACAGTATCTTCAGACACGCTGGATAAC +
Preference number: 5 (lower is better)
Translates to: SIPLELLGMESQLSS*SGFQRTVSSDTLDN
Trigger: GTTATCCAGCGTGTCTGAAGATACTGTTCTCTGGAACCCGGAGCATGATGAGAGCTGGGATTCCATGCCCAGCAGCTCCAGAGGAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
ENST00000549512.1
CDS CCA 90 bp GTCCTCAGCTTGCATTTCCTAAGATATTCACGCAGAGCCAGCACCTaGGCGGTTAAGGTGGTAGCCCTAACCTCGTTTCTCCTGGTTCCA +
Preference number: 5 (lower is better)
Translates to: VLSLHFLRYSRRAST*AVKVVALTSFLLVP
Trigger: TGGAACCAGGAGAAACGAGGTTAGGGCTACCACCTTAACCGCCCAGGTGCTGGCTCTGCGTGAATATCTTAGGAAATGCAAGCTGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000548932.5
CDS CCA 90 bp TTGCAGGATTTGCCTTCTGCATGCACTCTCTGGTGGCTGGCCAGATaGGAGTTGCATCGGAAATTCTTACCACACTCAGAGCACCTGCTG +
Preference number: 5 (lower is better)
Translates to: LQDLPSACTLWWLAR*ELHRKFLPHSEHLL
Trigger: CAGCAGGTGCTCTGAGTGTGGTAAGAATTTCCGATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CCA 90 bp CCAACCTCTTGGCCTTTGCAGGATTTGCCTTCTGCATGCACTCTCTaGTGGCTGGCCAGATGGGAGTTGCATCGGAAATTCTTACCACAC +
Preference number: 5 (lower is better)
Translates to: PTSWPLQDLPSACTL*WLARWELHRKFLPH
Trigger: GTGTGGTAAGAATTTCCGATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCGAAAGCATGTCCAGTTaGGGAATTGGAAATCTCAGA +
Preference number: 5 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPESMSS*GIGNLR
Trigger: TCTGAGATTTCCAATTCCCAAACTGGACATGCTTTC...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTTGCACACGTGACACTTaGGCACTGGTGGGGCACGCT +
Preference number: 5 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFCTRDT*ALVGHA
Trigger: AGCGTGCCCCACCAGTGCCAAAGTGTCACGTGTGCA...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCTGCACACGTGACACTTaGGCACTGGTGGGGCACGCT +
Preference number: 5 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCCTRDT*ALVGHA
Trigger: AGCGTGCCCCACCAGTGCCAAAGTGTCACGTGTGCA...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGTGGGCCAGGGCTATTaGGGGGTATTAGATCATCTC +
Preference number: 5 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYVGQGY*GVLDHL
Trigger: GAGATGATCTAATACCCCCAAATAGCCCTGGCCCAC...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCAATAACTCTTGCCCCTaGATGAGGCAGTCAAATTCA +
Preference number: 5 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPNNSCP*MRQSNS
Trigger: TGAATTTGACTGCCTCATCAAGGGGCAAGAGTTATT...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCGACACCTTTCCAGAATaGGAAGGAAAACCAACCAGA +
Preference number: 5 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGDTFPE*EGKPTR
Trigger: TCTGGTTGGTTTTCCTTCCAATTCTGGAAAGGTGTC...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAATTCACTTTTCTGATATaGCCCAGCCCCACCCACTCC +
Preference number: 5 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGEFTFLI*PSPTHS
Trigger: GGAGTGGGTGGGGCTGGGCAATATCAGAAAAGTGAA...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CCCCAAAGTTTCCTGGAAGAGGATGCCCAGGTGCCTGGTGGCAAGAGACAAGGCTTGGGGTCTAATCTTTaGACCTTGGAGAAGACCTGT +
Preference number: 5 (lower is better)
Translates to: PQSFLEEDAQVPGGKRQGLGSNL*TLEKTC
Trigger: ACAGGTCTTCTCCAAGGTCAAAAGATTAGACCCCAA...GCCTTGTCTCTTGCCACCAGGCACCTGGGCATCCTCTTCCAGGAAACTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGAAGAATGCTGCCTGTaGGGAAAAAGGAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYEECCL*GKRRWW
Trigger: CCACCACCTCCTTTTTCCCAACAGGCAGCATTCTTC...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGAAGAATGCTGCCTGTaGGGAAAAAGGAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSEECCL*GKRRWW
Trigger: CCACCACCTCCTTTTTCCCAACAGGCAGCATTCTTC...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCTGTAGAATTGAGAGTTaGGGCTGGGCGCGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: WISAINCQYHSPLENSSGCRIES*GWARWL
Trigger: GAGCCACCGCGCCCAGCCCAAACTCTCAATTCTACA...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS GCA 90 bp ATTTGCCTTCTGCATGCACTCTCTGGTGGCTGGCCAGATGGGAGTTaGATCGGAAATTCTTACCACACTCAGAGCACCTGCTGGTCTTGT +
Preference number: 5 (lower is better)
Translates to: ICLLHALSGGWPDGS*IGNSYHTQSTCWSC
Trigger: ACAAGACCAGCAGGTGCTCTGAGTGTGGTAAGAATTTCCGATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CCA 90 bp CCTCGTTTCTCCTGGTTCCAGGATGATCCCATGCCCACTGCAGTGTaGGTTCTAGGGCTTTCATTTCCCCCTTTTCTTCACACATATGGG +
Preference number: 5 (lower is better)
Translates to: PRFSWFQDDPMPTAV*VLGLSFPPFLHTYG
Trigger: CCCATATGTGTGAAGAAAAGGGGGAAATGAAAGCCCTAGAACCCACACTGCAGTGGGCATGGGATCATCCTGGAACCAGGAGAAACGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000548932.5
ENST00000550342.1
CDS CCA 90 bp ACCTCTTGGCCTTTGCAGGATTTGCCTTCTGCATGCACTCTCTGGTaGCTGGCCAGATGGGAGTTGCATCGGAAATTCTTACCACACTCA +
Preference number: 5 (lower is better)
Translates to: TSWPLQDLPSACTLW*LARWELHRKFLPHS
Trigger: TGAGTGTGGTAAGAATTTCCGATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCACTGGCCAGATGGGAGTaGCATCGGAAATTCTTACCA +
Preference number: 5 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSLARWE*HRKFLP
Trigger: TGGTAAGAATTTCCGATGCAACTCCCATCTGGCCAG...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCCCAACCTCTTGGCCTTaGCAGGATTTGCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSPTSWP*QDLPSA
Trigger: TGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTGG...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGCCCCAGTTCTTTTACTGAGTTAAGAGTGGAAGAAGACCTTGCAACTAAGGGGTGCACACGTGACACTTaGGCACTGGTGGGGCACGCT +
Preference number: 5 (lower is better)
Translates to: SPSSFTELRVEEDLATKGCTRDT*ALVGHA
Trigger: AGCGTGCCCCACCAGTGCCAAAGTGTCACGTGTGCA...CCCCTTAGTTGCAAGGTCTTCTTCCACTCTTAACTCAGTAAAAGAACTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATAGTACCACTCTCCTCTaGAGAACAGCTCAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYSTTLL*RTAQAE
Trigger: TTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTACT...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CCA 90 bp CCGGGTTCCAGAGAACAGTATCTTCAGACACGCTGGATAACATTCTaGGAGGTTCTGCTTCTAGTTCAGGGGTATCCCCCTCATGTTCAC +
Preference number: 5 (lower is better)
Translates to: PGSREQYLQTRWITF*EVLLLVQGYPPHVH
Trigger: GTGAACATGAGGGGGATACCCCTGAACTAGAAGCAGAACCTCCCAGAATGTTATCCAGCGTGTCTGAAGATACTGTTCTCTGGAACCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
ENST00000549512.1
CDS CCA 90 bp TACAGGCCAGACCGAGGCCGAGAGCGATTTCTCCAGACAACAGTCTaGAATTCCTCAAGGAGCGTACCCTCTAGTTTTCACGATAGGATA +
Preference number: 5 (lower is better)
Translates to: YRPDRGRERFLQTTV*NSSRSVPSSFHDRI
Trigger: TATCCTATCGTGAAAACTAGAGGGTACGCTCCTTGAGGAATTCCAGACTGTTGTCTGGAGAAATCGCTCTCGGCCTCGGTCTGGCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550181.5
CDS-3UTR CAA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACTGGCCTTTGCAGGATTaGCCTTCTGCATGCACTCTC +
Preference number: 5 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDWPLQD*PSACTL
Trigger: GAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCCA...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTGCTCTCTCCAACCTCTaGGCCTTTGCAGGATTTGCC +
Preference number: 5 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFALSNL*AFAGFA
Trigger: GGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAGC...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCGCTGTTCCGGGGACTTaGTCCCTGGTGGGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: NPILSYSLGHLLILILKCAVPGT*SLVGEQ
Trigger: CTGCTCACCCACCAGGGACAAAGTCCCCGGAACAGC...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAACGGCAGCCCTGCTTCCCAAAAGTTTaGCCCAAAGAACTCTATTTT +
Preference number: 5 (lower is better)
Translates to: DGVRAYDSGHWGSGERQPCFPKV*PKELYF
Trigger: AAAATAGAGTTCTTTGGGCAAAACTTTTGGGAAGCA...GGGCTGCCGTTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGGCAATTCACTTCCTCTaGCCTCTCTGGTTCATTCCA +
Preference number: 5 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEAIHFL*PLWFIP
Trigger: TGGAATGAACCAGAGAGGCAAGAGGAAGTGAATTGC...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAAGTGAAACATGAACATTaGAGGCTGATTCCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGEVKHEH*RLIPCG
Trigger: CCCACAGGGAATCAGCCTCAAATGTTCATGTTTCAC...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAATTTGAGAGCCACAGTTaGGTATGGCTCACAAGGGAA +
Preference number: 5 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGEFESHS*VWLTRE
Trigger: TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAA...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGTGAGGTACCACTGCTaGAAATATGAATCCCCTAGC +
Preference number: 5 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILVRYHC*KYESPS
Trigger: GCTAGGGGATTCATATTTCAAGCAGTGGTACCTCAC...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAAGTGAGGTACCACTGCTaGAAATATGAATCCCCTAGC +
Preference number: 5 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGEVRYHC*KYESPS
Trigger: GCTAGGGGATTCATATTTCAAGCAGTGGTACCTCAC...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGAGTGGAAGAAGACCTaGCAACTAAGGGGAATGGAA +
Preference number: 5 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYEWKKT*QLRGME
Trigger: TTCCATTCCCCTTAGTTGCAAGGTCTTCTTCCACTC...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCATGTTCCTGCTGCCCTaGCCCATAGGGTATGCCAAA +
Preference number: 5 (lower is better)
Translates to: WISAINCQYHSPLENSSGMFLLP*PIGYAK
Trigger: TTTGGCATACCCTATGGGCAAGGGCAGCAGGAACAT...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACATAGGCACGGAGCAGTaGGGCTGCATGGCAAGTGGG +
Preference number: 5 (lower is better)
Translates to: QSEWISAINCQYHSPLENIGTEQ*GCMASG
Trigger: CCCACTTGCCATGCAGCCCAACTGCTCCGTGCCTAT...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS CCA 90 bp TCTCATCATGCTCCGGGTTCCAGAGAACAGTATCTTCAGACACGCTaGATAACATTCTGGGAGGTTCTGCTTCTAGTTCAGGGGTATCCC +
Preference number: 5 (lower is better)
Translates to: SHHAPGSREQYLQTR*ITFWEVLLLVQGYP
Trigger: GGGATACCCCTGAACTAGAAGCAGAACCTCCCAGAATGTTATCCAGCGTGTCTGAAGATACTGTTCTCTGGAACCCGGAGCATGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
ENST00000549512.1
CDS-3UTR CAA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCCCAGCTGTACATTCATaGATTCCCATCCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: WISAINCQYHSPLENSSGPAVHS*IPILSP
Trigger: TGGGGACAGGATGGGAATCAATGAATGTACAGCTGG...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTGTCCAGTTTGGGAATaGGAAATCTCAGAGAGACTA +
Preference number: 5 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGCPVWE*EISERL
Trigger: TAGTCTCTCTGAGATTTCCAATTCCCAAACTGGACA...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCCTGGCCAGATGGGAGTaGCATCGGAAATTCTTACCA +
Preference number: 5 (lower is better)
Translates to: WISAINCQYHSPLENSSGLARWE*HRKFLP
Trigger: TGGTAAGAATTTCCGATGCAACTCCCATCTGGCCAG...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCCAACCTCTTGGCCTTaGCAGGATTTGCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFPTSWP*QDLPSA
Trigger: TGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTGG...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATGCTGTTCCGGGGACTTaGTCCCTGGTGGGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDAVPGT*SLVGEQ
Trigger: CTGCTCACCCACCAGGGACAAAGTCCCCGGAACAGC...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCGAAATGCTCTGGCCATaGCTGGGACCTCATCTTTCT +
Preference number: 5 (lower is better)
Translates to: WISAINCQYHSPLENSSGEMLWP*LGPHLS
Trigger: AGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTC...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACGAAATGCTCTGGCCATaGCTGGGACCTCATCTTTCT +
Preference number: 5 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDEMLWP*LGPHLS
Trigger: AGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTC...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATCCTAGCTTGTACAGTTaGCACATAGCATGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: MLWPLLGPHLSRDGVRAYPSLYS*HIACCL
Trigger: AAGACAGCATGCTATGTGCAAACTGTACAAGCTAGG...ATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCCCTGTTTTACATTTaGCCCAAAGAGAACACAGAG +
Preference number: 5 (lower is better)
Translates to: GPHLSRDGVRAYDSGHWGSLFYI*PKENTE
Trigger: CTCTGTGTTCTCTTTGGGCAAAATGTAAAACAGGGA...ACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CCTTTCAGATTTCTGGACCCAAGTATCCTCAGTGCCCATATTGGAAGCCCCAGCTTTGAGAGCCACAGTTaGGTATGGCTCACAAGGGAA +
Preference number: 5 (lower is better)
Translates to: PFRFLDPSILSAHIGSPSFESHS*VWLTRE
Trigger: TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAA...GCTGGGGCTTCCAATATGGGCACTGAGGATACTTGGGTCCAGAAATCTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGTTCCATGGCCCCTCGTaGGTCTCTAATCCAATTTTT +
Preference number: 5 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEFHGPS*VSNPIF
Trigger: AAAAATTGGATTAGAGACCAACGAGGGGCCATGGAA...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGTGGAAGGGCATGTTATaGCTCAGTCAGAACAAAGCA +
Preference number: 5 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILWKGML*LSQNKA
Trigger: TGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCA...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACAGCTCAGGCACCATAAGTCCCCTGTaGGGTAACCCAAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: WISAINCQYHSPLENSSGTISPL*GNPRKF
Trigger: GAACTTCCTTGGGTTACCCAACAGGGGACTTATGGT...GCCTGAGCTGTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGAAAGCATGTCCAGTTaGGGAATTGGAAATCTCAGA +
Preference number: 5 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSESMSS*GIGNLR
Trigger: TCTGAGATTTCCAATTCCCAAACTGGACATGCTTTC...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTGGCCAGATGGGAGTaGCATCGGAAATTCTTACCA +
Preference number: 5 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFLARWE*HRKFLP
Trigger: TGGTAAGAATTTCCGATGCAACTCCCATCTGGCCAG...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACGCTCTCTCCAACCTCTaGGCCTTTGCAGGATTTGCC +
Preference number: 5 (lower is better)
Translates to: QSEWISAINCQYHSPLENALSNL*AFAGFA
Trigger: GGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAGC...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCCACGCTGCCGTTTCCTaGTGCCAGGGCTCTCTCCAA +
Preference number: 5 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSHAAVS*CQGSLQ
Trigger: TTGGAGAGAGCCCTGGCACAAGGAAACGGCAGCGTG...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCACCGGCTGATAGACTaGACCATAGCTGTAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFHRLID*TIAVVE
Trigger: TTCCACTACAGCTATGGTCAAGTCTATCAGCCGGTG...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGAAGACAGTGGTACACCAGAAATAACCCAAAGGATTGCCCCTTCTGTAGAAGGGTGGGCCAGGGCTATTaGGGGGTATTAGATCATCTC +
Preference number: 5 (lower is better)
Translates to: RRQWYTRNNPKDCPFCRRVGQGY*GVLDHL
Trigger: GAGATGATCTAATACCCCCAAATAGCCCTGGCCCAC...CCTTCTACAGAAGGGGCAATCCTTTGGGTTATTTCTGGTGTACCACTGTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAAGGTTCATTCCACCAATaGTGGTTGAGAAACACATCT +
Preference number: 5 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGEGSFHQ*WLRNTS
Trigger: AGATGTGTTTCTCAACCACAATTGGTGGAATGAACC...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCCCAAGAGAGGTGGTGTaGGACCGAGGTAGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVPREVV*DRGRED
Trigger: GTCTTCTCTACCTCGGTCCAACACCACCTCTCTTGG...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGAAAGCATGTCCAGTTaGGGAATTGGAAATCCATTG +
Preference number: 5 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSESMSS*GIGNPL
Trigger: CAATGGATTTCCAATTCCCAAACTGGACATGCTTTC...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448928.7
CDS-3UTR CAA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGCCCAAAGACCAAATTTaGAGAGCCACAGTTTGGTAT +
Preference number: 5 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEEPKDQI*RATVWY
Trigger: ATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGG...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTTCCTCAGTGCCCATATaGGAAGCCCCAGCCCCAATG +
Preference number: 5 (lower is better)
Translates to: ILSYSLGHLLILILKCSCSSVPI*EAPAPM
Trigger: CATTGGGGCTGGGGCTTCCAATATGGGCACTGAGGA...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAACTTCTTCCCTTCTTCTaGTCACAGTGCCCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LAQRPNFESHSLVWLTRELLPFF*SQCPWK
Trigger: TTTCCAGGGGCACTGTGACAAGAAGAAGGGAAGAAG...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS-3UTR CAA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACCACAGTGACACATCCTaGATGGTTACCAGGCCCTGT +
Preference number: 5 (lower is better)
Translates to: QSEWISAINCQYHSPLENHSDTS*MVTRPC
Trigger: ACAGGGCCTGGTAACCATCAAGGATGTGTCACTGTG...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGGAAAGCATGTCCAGTTaGGGAATTGGAAATCTCAGA +
Preference number: 5 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRESMSS*GIGNLR
Trigger: TCTGAGATTTCCAATTCCCAAACTGGACATGCTTTC...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCTGGCCTTTGCAGGATTaGCCTTCTGCATGCACTCTC +
Preference number: 5 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVWPLQD*PSACTL
Trigger: GAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCCA...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTTGCACACGTGACACTTaGGCACTGGTGGGGCACGCT +
Preference number: 5 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTCTRDT*ALVGHA
Trigger: AGCGTGCCCCACCAGTGCCAAAGTGTCACGTGTGCA...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGTTTCTATGTGCCTCTaGCCTGAAATCAACAAGAAA +
Preference number: 5 (lower is better)
Translates to: GHCWDLIFLGMGSGLMILVSMCL*PEINKK
Trigger: TTTCTTGTTGATTTCAGGCAAGAGGCACATAGAAAC...CAGAATCATAAGCCCTGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCGCAATTCACTTCCTCTaGCCTCTCTGGTTCATTCCA +
Preference number: 5 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCAIHFL*PLWFIP
Trigger: TGGAATGAACCAGAGAGGCAAGAGGAAGTGAATTGC...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTGCAATTCACTTCCTCTaGCCTCTCTGGTTCATTCCA +
Preference number: 5 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFAIHFL*PLWFIP
Trigger: TGGAATGAACCAGAGAGGCAAGAGGAAGTGAATTGC...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCAGCCAAGCCAAGAATTaGGAGGATGAGAGTGGTAAG +
Preference number: 5 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCSQAKN*EDESGK
Trigger: CTTACCACTCTCATCCTCCAAATTCTTGGCTTGGCT...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATGTAGAGGGGCCAGATTaGGCAGTACTAGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNVEGPD*AVLGRG
Trigger: CCCCCTGCCTAGTACTGCCAAATCTGGCCCCTCTAC...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTCTTTCTCTGCCAGGGCAAAAGCAATCTGCAGCCCAGAGATTCAAACCTAGACTGTCCAGTTTGGGAATaGGAAATCTCAGAGAGACTA +
Preference number: 5 (lower is better)
Translates to: LFLCQGKSNLQPRDSNLDCPVWE*EISERL
Trigger: TAGTCTCTCTGAGATTTCCAATTCCCAAACTGGACA...GTCTAGGTTTGAATCTCTGGGCTGCAGATTGCTTTTGCCCTGGCAGAGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCCCAACCTCTTGGCCTTaGCAGGATTTGCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: NPILSYSLGHLLILILKCPTSWP*QDLPSA
Trigger: TGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTGG...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACCACCGGCTGATAGACTaGACCATAGCTGTAGTGGAA +
Preference number: 5 (lower is better)
Translates to: QSEWISAINCQYHSPLENHRLID*TIAVVE
Trigger: TTCCACTACAGCTATGGTCAAGTCTATCAGCCGGTG...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTTTCTAGGGATGGGGTCAGGGCTTATGATTCTGGCCACTGGGGTTCAGGAGAATGCTTCCCAAAAGTTTaGCCCAAAGAACTCTATTTT +
Preference number: 5 (lower is better)
Translates to: LSRDGVRAYDSGHWGSGECFPKV*PKELYF
Trigger: AAAATAGAGTTCTTTGGGCAAAACTTTTGGGAAGCA...TTCTCCTGAACCCCAGTGGCCAGAATCATAAGCCCTGACCCCATCCCTAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GCCCACTCCACCTGCCTCTTATTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGCCTGATCACTATCTCTaGTTTCCTTGTTACTCTCTA +
Preference number: 5 (lower is better)
Translates to: AHSTCLLLEEPVKRTRQRPDHYL*FPCYSL
Trigger: TAGAGAGTAACAAGGAAACAAGAGATAGTGATCAGG...CCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAATAAGAGGCAGGTGGAGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTAGGGATGGGGTCATGCTTGTTTTATTTTTaGTCCAAGAGAGGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: GEKCSGHCWDLIFLGMGSCLFYF*SKRGGV
Trigger: AACACCACCTCTCTTGGACAAAAAATAAAACAAGCA...TGACCCCATCCCTAGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGCAGTTGGGCTGCATGGCAAGTGGGCATTCATCCCCAAAGTTTCCTGGAAGAGTGCTTGTTTTATTTTTaGTCCAAGAGAGGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: SSWAAWQVGIHPQSFLEECLFYF*SKRGGV
Trigger: AACACCACCTCTCTTGGACAAAAAATAAAACAAGCA...CTCTTCCAGGAAACTTTGGGGATGAATGCCCACTTGCCATGCAGCCCAACTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACTTCACTTTTCTGATATaGCCCAGCCCCACCCACTCC +
Preference number: 5 (lower is better)
Translates to: RTNALGRACYCSVRTKQNFTFLI*PSPTHS
Trigger: GGAGTGGGTGGGGCTGGGCAATATCAGAAAAGTGAA...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAAGCGGGGGCTAAGAATTaGCATTTCAAACAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: LAQRPNFESHSLVWLTREAGAKN*HFKQVS
Trigger: GGAAACTTGTTTGAAATGCAAATTCTTAGCCCCCGC...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCAGAGAACAAATGCCCTaGGAAGGGCATGTTATTGCT +
Preference number: 5 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCREQMP*EGHVIA
Trigger: AGCAATAACATGCCCTTCCAAGGGCATTTGTTCTCT...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTCTCTGAGGCAGAGGAGGGATTAAACGAACATGGAATGATGATGTCCCGAACTGAAAGCATGTCCAGTTaGGGAATTGGAAATCTCAGA +
Preference number: 5 (lower is better)
Translates to: LSEAEEGLNEHGMMMSRTESMSS*GIGNLR
Trigger: TCTGAGATTTCCAATTCCCAAACTGGACATGCTTTC...AGTTCGGGACATCATCATTCCATGTTCGTTTAATCCCTCCTCTGCCTCAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546874.1
CDS-3UTR CAA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTCTATCTCTTGTTTCCTaGTTACTCTCTAACCCAGTG +
Preference number: 5 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFLSLVS*LLSNPV
Trigger: CACTGGGTTAGAGAGTAACAAGGAAACAAGAGATAG...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTGGTTCATTCCACCAATaGTGGTTGAGAAACACATCT +
Preference number: 5 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFGSFHQ*WLRNTS
Trigger: AGATGTGTTTCTCAACCACAATTGGTGGAATGAACC...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAATTCCACAGATGGGCTTaGAACCTGCTAAATGTGTAT +
Preference number: 5 (lower is better)
Translates to: LAQRPNFESHSLVWLTREFHRWA*NLLNVY
Trigger: ATACACATTTAGCAGGTTCAAAGCCCATCTGTGGAA...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTAGCTGGGTGCTATACTaGCACCTAACTCTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTSWVLY*HLTLGA
Trigger: AGCCCCCAGAGTTAGGTGCAAGTATAGCACCCAGCT...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATAGCTGGGTGCTATACTaGCACCTAACTCTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNSWVLY*HLTLGA
Trigger: AGCCCCCAGAGTTAGGTGCAAGTATAGCACCCAGCT...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTGGAAAGGGAGGAATTTaGTCCCAAATTATCACCTCT +
Preference number: 5 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFGKGGI*SQIITS
Trigger: AGAGGTGATAATTTGGGACAAAATTCCTCCCTTTCC...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAAGGAAAGGGAGGAATTTaGTCCCAAATTATCACCTCT +
Preference number: 5 (lower is better)
Translates to: LAQRPNFESHSLVWLTREGKGGI*SQIITS
Trigger: AGAGGTGATAATTTGGGACAAAATTCCTCCCTTTCC...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CAATCAGAATGGATTTCAGCCATAAACTGCCAGTACCACTCTCCTCTTGAGAACTCTAATCTTTTGACCTaGGAGAAGACCTGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: QSEWISAINCQYHSPLENSNLLT*EKTCGQ
Trigger: CTGCCCACAGGTCTTCTCCAAGGTCAAAAGATTAGA...GTTCTCAAGAGGAGAGTGGTACTGGCAGTTTATGGCTGAAATCCATTCTGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATCACAGTGACACATCCTaGATGGTTACCAGGCCCTGT +
Preference number: 5 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNHSDTS*MVTRPC
Trigger: ACAGGGCCTGGTAACCATCAAGGATGTGTCACTGTG...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTGGCCCAAAGACCAAATTTTGAGAGCCACAGTTTGGTATGGCTCACAAGGGAACCTGATCACTATCTCTaGTTTCCTTGTTACTCTCTA +
Preference number: 5 (lower is better)
Translates to: LAQRPNFESHSLVWLTREPDHYL*FPCYSL
Trigger: TAGAGAGTAACAAGGAAACAAGAGATAGTGATCAGG...TTCCCTTGTGAGCCATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTGTTTCTATGTGCCTCTaGCCTGAAATCAACAAGAAA +
Preference number: 5 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFVSMCL*PEINKK
Trigger: TTTCTTGTTGATTTCAGGCAAGAGGCACATAGAAAC...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATTCTAGTTGAGTCCAGGACTCTGAGGAGCTGTGATTCACCCAGTTTTTCCTGCGTTTCTATGTGCCTCTaGCCTGAAATCAACAAGAAA +
Preference number: 5 (lower is better)
Translates to: ILVESRTLRSCDSPSFSCVSMCL*PEINKK
Trigger: TTTCTTGTTGATTTCAGGCAAGAGGCACATAGAAAC...GCAGGAAAAACTGGGTGAATCACAGCTCCTCAGAGTCCTGGACTCAACTAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCTGTGAGGAGCTGGATTaGTCAGCATGTCAGATCTTT +
Preference number: 5 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVCEELD*SACQIF
Trigger: AAAGATCTGACATGCTGACAAATCCAGCTCCTCACA...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATGCGGGGGCTAAGAATTaGCATTTCAAACAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHAGAKN*HFKQVS
Trigger: GGAAACTTGTTTGAAATGCAAATTCTTAGCCCCCGC...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCTTGGGGTCTAATCTTTaGACCTTGGAGAAGACCTGT +
Preference number: 5 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVLGSNL*TLEKTC
Trigger: ACAGGTCTTCTCCAAGGTCAAAAGATTAGACCCCAA...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TTAGAAGAGCCAGTGAAAAGGACAAGGCAAAGGAGAATCATTTCCTCGGATGTCAAGAAAGTCTCAGCCTaGGGGTCTAATCTTTTGACC +
Preference number: 5 (lower is better)
Translates to: LEEPVKRTRQRRIISSDVKKVSA*GSNLLT
Trigger: GGTCAAAAGATTAGACCCCAAGGCTGAGACTTTCTT...GACATCCGAGGAAATGATTCTCCTTTGCCTTGTCCTTTTCACTGGCTCTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCACCATAAGTCCCCTGTaGGGTAACCCAAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSTISPL*GNPRKF
Trigger: GAACTTCCTTGGGTTACCCAACAGGGGACTTATGGT...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGCACAGTGACACATCCTaGATGGTTACCAGGCCCTGT +
Preference number: 5 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLHSDTS*MVTRPC
Trigger: ACAGGGCCTGGTAACCATCAAGGATGTGTCACTGTG...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCCTGGCCAGATGGGAGTaGCATCGGAAATTCTTACCA +
Preference number: 5 (lower is better)
Translates to: RETMTNSLANDARILMQALARWE*HRKFLP
Trigger: TGGTAAGAATTTCCGATGCAACTCCCATCTGGCCAG...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGAAATGCTCTGGCCATaGCTGGGACCTCATCTTTCT +
Preference number: 5 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTEMLWP*LGPHLS
Trigger: AGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTC...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTAGTGATGGCAACAACTaGCAAACACGTAATTCCTGC +
Preference number: 5 (lower is better)
Translates to: ILSYSLGHLLILILKCSCSDGNN*QTRNSC
Trigger: GCAGGAATTACGTGTTTGCAAGTTGTTGCCATCACT...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATTTCCACAGATGGGCTTaGAACCTGCTAAATGTGTAT +
Preference number: 5 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHFHRWA*NLLNVY
Trigger: ATACACATTTAGCAGGTTCAAAGCCCATCTGTGGAA...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCAGCTGGGTGCTATACTaGCACCTAACTCTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFSWVLY*HLTLGA
Trigger: AGCCCCCAGAGTTAGGTGCAAGTATAGCACCCAGCT...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTTGCTTGTTTTATTTTTaGTCCAAGAGAGGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFCLFYF*SKRGGV
Trigger: AACACCACCTCTCTTGGACAAAAAATAAAACAAGCA...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTTGAAAGATACTATGTaGGGGTGGAAAGGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: NPILSYSLGHLLILILKCLKDTM*GWKGED
Trigger: ATCCTCCCCTTTCCACCCCAACATAGTATCTTTCAA...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp CTATCTCACAGAACTGGTGAGAAATGCTCTGGCCATTGCTGGGACCTCATCTTTATAGGAAACAGTGATTaGATTGCAGGAATGTTGGAA +
Preference number: 5 (lower is better)
Translates to: LSHRTGEKCSGHCWDLIFIGNSD*IAGMLE
Trigger: TTCCAACATTCCTGCAATCAAATCACTGTTTCCTAT...AAAGATGAGGTCCCAGCAATGGCCAGAGCATTTCTCACCAGTTCTGTGAGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCAGTCAGGACCTGCCCTaGATGGAAATAGGAAACAGT +
Preference number: 5 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSSQDLP*MEIGNS
Trigger: ACTGTTTCCTATTTCCATCAAGGGCAGGTCCTGACT...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTAGAGAACAAATGCCCTaGGAAGGGCATGTTATTGCT +
Preference number: 5 (lower is better)
Translates to: ILSYSLGHLLILILKCSCREQMP*EGHVIA
Trigger: AGCAATAACATGCCCTTCCAAGGGCATTTGTTCTCT...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTGCTCAGGGGTAAGGTaGCTTCTTCCCTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNCSGVR*LLPFFL
Trigger: CAAGAAGAAGGGAAGAAGCAACCTTACCCCTGAGCA...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS-3UTR CAA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCTGGCCTTTGCAGGATTaGCCTTCTGCATGCACTCTC +
Preference number: 5 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFWPLQD*PSACTL
Trigger: GAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCCA...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGAGTACCACTCTCCTCTaGAGAACAGCTCAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLSTTLL*RTAQAE
Trigger: TTCAGCCTGAGCTGTTCTCAAGAGGAGAGTGGTACT...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AACCCAATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCCTATCTCTTGTTTCCTaGTTACTCTCTAACCCAGTG +
Preference number: 5 (lower is better)
Translates to: NPILSYSLGHLLILILKCLSLVS*LLSNPV
Trigger: CACTGGGTTAGAGAGTAACAAGGAAACAAGAGATAG...GCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTATTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCCCTAGCTTGTACAGTTaGCACATAGCATGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSPSLYS*HIACCL
Trigger: AAGACAGCATGCTATGTGCAAACTGTACAAGCTAGG...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGAACAAATGCCCTTGGAAGGGCATGTTATTGCTCAGTCAGAACAAAGCAAAACAATAACTCTTGCCCCTaGATGAGGCAGTCAAATTCA +
Preference number: 5 (lower is better)
Translates to: RTNALGRACYCSVRTKQNNNSCP*MRQSNS
Trigger: TGAATTTGACTGCCTCATCAAGGGGCAAGAGTTATT...GTTTTGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCAAGGGCATTTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCGACACCTTTCCAGAATaGGAAGGAAAACCAACCAGA +
Preference number: 5 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSDTFPE*EGKPTR
Trigger: TCTGGTTGGTTTTCCTTCCAATTCTGGAAAGGTGTC...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCCATGGCCCCTCGTaGGTCTCTAATCCAATTTTT +
Preference number: 5 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSFHGPS*VSNPIF
Trigger: AAAAATTGGATTAGAGACCAACGAGGGGCCATGGAA...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTCTAATCTTTTGACCTaGGAGAAGACCTGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNSNLLT*EKTCGQ
Trigger: CTGCCCACAGGTCTTCTCCAAGGTCAAAAGATTAGA...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCGAAATGCTCTGGCCATaGCTGGGACCTCATCTTTCT +
Preference number: 5 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFEMLWP*LGPHLS
Trigger: AGAAAGATGAGGTCCCAGCAATGGCCAGAGCATTTC...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GTGAGAGGTGATGTATATACTGCTGATTGGCATAAGGAAGACAGACCCACACATTGCTTCCCAAAAGTTTaGCCCAAAGAACTCTATTTT +
Preference number: 5 (lower is better)
Translates to: VRGDVYTADWHKEDRPTHCFPKV*PKELYF
Trigger: AAAATAGAGTTCTTTGGGCAAAACTTTTGGGAAGCA...ATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCCTATCTCTTGTTTCCTaGTTACTCTCTAACCCAGTG +
Preference number: 5 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSLSLVS*LLSNPV
Trigger: CACTGGGTTAGAGAGTAACAAGGAAACAAGAGATAG...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATCCTAGAAAACCTAGCTaGTACAGTTTGCACATAGCA +
Preference number: 5 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDPRKPS*YSLHIA
Trigger: TGCTATGTGCAAACTGTACAAGCTAGGTTTTCTAGG...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTTTCAGAGCAATAACTCTTGCCCCTaGATGAGGCAGTCAAATTCA +
Preference number: 5 (lower is better)
Translates to: KHCLNRTFSWVYCRNFQSNNSCP*MRQSNS
Trigger: TGAATTTGACTGCCTCATCAAGGGGCAAGAGTTATT...GCTCTGAAAATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATGACACCTTTCCAGAATaGGAAGGAAAACCAACCAGA +
Preference number: 5 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNDTFPE*EGKPTR
Trigger: TCTGGTTGGTTTTCCTTCCAATTCTGGAAAGGTGTC...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCCACAGATGGGCTTaGAACCTGCTAAATGTGTAT +
Preference number: 5 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSFHRWA*NLLNVY
Trigger: ATACACATTTAGCAGGTTCAAAGCCCATCTGTGGAA...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTGTGAGGAGCTGGATTaGTCAGCATGTCAGATCTTT +
Preference number: 5 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNCEELD*SACQIF
Trigger: AAAGATCTGACATGCTGACAAATCCAGCTCCTCACA...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGGTGAAACATGAACATTaGAGGCTGATTCCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLVKHEH*RLIPCG
Trigger: CCCACAGGGAATCAGCCTCAAATGTTCATGTTTCAC...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TGTAGTTATAAGGGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCCCCAAAGACCAAATTTaGAGAGCCACAGTTTGGTAT +
Preference number: 5 (lower is better)
Translates to: CSYKGRDLIVRNITSHKSPKDQI*RATVWY
Trigger: ATACCAAACTGTGGCTCTCAAAATTTGGTCTTTGGG...GGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCCCTTATAACTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTTGGAAGGGCATGTTATaGCTCAGTCAGAACAAAGCA +
Preference number: 5 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTWKGML*LSQNKA
Trigger: TGCTTTGTTCTGACTGAGCAATAACATGCCCTTCCA...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTGCAGAAATTGTCCAGTTTGGGAATaGGAAATCTCAGAGAGACTA +
Preference number: 5 (lower is better)
Translates to: TFRKHCLNRTFSWVYCRNCPVWE*EISERL
Trigger: TAGTCTCTCTGAGATTTCCAATTCCCAAACTGGACA...ATTTCTGCAGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TCAAATCCACAAAGTGCCTGCTACATCATTCTATTACACTCCCTTGCTTTTGAATGTCCAGTTTGGGAATaGGAAATCTCAGAGAGACTA +
Preference number: 5 (lower is better)
Translates to: SNPQSACYIILLHSLAFECPVWE*EISERL
Trigger: TAGTCTCTCTGAGATTTCCAATTCCCAAACTGGACA...TTCAAAAGCAAGGGAGTGTAATAGAATGATGTAGCAGGCACTTTGTGGATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546874.1
CDS-3UTR CAA 90 bp GGGCGTGATCTAATAGTAAGGAATATCACTTCCCACAAGTCCTTCAAACAAGATCCTGATCACTATCTCTaGTTTCCTTGTTACTCTCTA +
Preference number: 5 (lower is better)
Translates to: GRDLIVRNITSHKSFKQDPDHYL*FPCYSL
Trigger: TAGAGAGTAACAAGGAAACAAGAGATAGTGATCAGG...ATCTTGTTTGAAGGACTTGTGGGAAGTGATATTCCTTACTATTAGATCACGCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGAGAAACAATGACCAACTCATTAGCTAACGATGCTAGAATACTTATGCAAGCCCCTAGAAAACCTAGCTaGTACAGTTTGCACATAGCA +
Preference number: 5 (lower is better)
Translates to: RETMTNSLANDARILMQAPRKPS*YSLHIA
Trigger: TGCTATGTGCAAACTGTACAAGCTAGGTTTTCTAGG...GGCTTGCATAAGTATTCTAGCATCGTTAGCTAATGAGTTGGTCATTGTTTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGTGTGAGGAGCTGGATTaGTCAGCATGTCAGATCTTT +
Preference number: 5 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLCEELD*SACQIF
Trigger: AAAGATCTGACATGCTGACAAATCCAGCTCCTCACA...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp ATACTTTCTTACTCCCTGGGGCATCTCCTAATACTGATCCTAAAATGCTCCTGTATAGGAAACAGTGATTaGATTGCAGGAATGTTGGAA +
Preference number: 5 (lower is better)
Translates to: ILSYSLGHLLILILKCSCIGNSD*IAGMLE
Trigger: TTCCAACATTCCTGCAATCAAATCACTGTTTCCTAT...ACAGGAGCATTTTAGGATCAGTATTAGGAGATGCCCCAGGGAGTAAGAAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCAGTCAGGACCTGCCCTaGATGGAAATAGGAAACAGT +
Preference number: 5 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFSQDLP*MEIGNS
Trigger: ACTGTTTCCTATTTCCATCAAGGGCAGGTCCTGACT...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AGGAAGTTCACAGTTCATCAGAAGGAACCAATTCAGATAATAGCTAGAAATCTGAAGAAAGTCTCAGCCTaGGGGTCTAATCTTTTGACC +
Preference number: 5 (lower is better)
Translates to: RKFTVHQKEPIQIIARNLKKVSA*GSNLLT
Trigger: GGTCAAAAGATTAGACCCCAAGGCTGAGACTTTCTT...CAGATTTCTAGCTATTATCTGAATTGGTTCCTTCTGATGAACTGTGAACTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp TCAAATCCACAAAGTGCCTGCTACATCATTCTATTACACTCCCTTGCTTTTGAAAAATCTCTAAACCTTTaGTCTCTGGAACTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SNPQSACYIILLHSLAFEKSLNL*SLELSE
Trigger: CTCAGAGAGTTCCAGAGACAAAAGGTTTAGAGATTT...TTCAAAAGCAAGGGAGTGTAATAGAATGATGTAGCAGGCACTTTGTGGATTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546874.1
CDS-3UTR CAA 90 bp GGTCAAATACATTTAGGAAACACTGCCTTAATAGAACCTTCAGTTGGGTCTACTTGCTTCCCAAAAGTTTaGCCCAAAGAACTCTATTTT +
Preference number: 5 (lower is better)
Translates to: GQIHLGNTALIEPSVGSTCFPKV*PKELYF
Trigger: AAAATAGAGTTCTTTGGGCAAAACTTTTGGGAAGCA...AGTAGACCCAACTGAAGGTTCTATTAAGGCAGTGTTTCCTAAATGTATTTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS-3UTR CAA 90 bp AAACATGAACATTTGAGGCTGATTCCCTGTGGGAAAAATCATTCAAATCTATTCCCTAGAAAACCTAGCTaGTACAGTTTGCACATAGCA +
Preference number: 5 (lower is better)
Translates to: KHEHLRLIPCGKNHSNLFPRKPS*YSLHIA
Trigger: TGCTATGTGCAAACTGTACAAGCTAGGTTTTCTAGG...GAATAGATTTGAATGATTTTTCCCACAGGGAATCAGCCTCAAATGTTCATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000547026.6
CDS CCA 72 bp CACACGGACGAGTTGGCTCCGTCCATCAGAGAACCCTaGCCCCTGCCACGGGTAGGGCATGGGCGGGACGGG +
Preference number: 6 (lower is better)
Translates to: HTDELAPSIREP*PLPRVGHGRDG
Trigger: CCCGTCCCGCCCATGCCCTACCCGTGGCAGGGGCCAGGGTTCTCTGATGGACGGAGCCAACTCGTCCGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544117.6
ENST00000550342.1
CDS GCA 72 bp ACTTTGGCACTGGTGGGGCACGCTGCCGTTTCCTTGTaGCAGGGCTCTCTCCAACCTCTTGGCCTTTGCAGG +
Preference number: 6 (lower is better)
Translates to: TLALVGHAAVSL*QGSLQPLGLCR
Trigger: CCTGCAAAGGCCAAGAGGTTGGAGAGAGCCCTGGCACAAGGAAACGGCAGCGTGCCCCACCAGTGCCAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CCA 72 bp CCCACATTCAGTGCACACGTGACACTTTGGCACTGGTaGGGCACGCTGCCGTTTCCTTGTGCCAGGGCTCTC +
Preference number: 6 (lower is better)
Translates to: PTFSAHVTLWHW*GTLPFPCARAL
Trigger: GAGAGCCCTGGCACAAGGAAACGGCAGCGTGCCCCACCAGTGCCAAAGTGTCACGTGTGCACTGAATGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS GCA 72 bp AGGGACTGTGGCTCCTCTTCAAGGTCACAGCACAGGTaGTCCAGAGGTCCTGGTACTGTTCTCCATGGCCGC +
Preference number: 6 (lower is better)
Translates to: RDCGSSSRSQHR*SRGPGTVLHGR
Trigger: GCGGCCATGGAGAACAGTACCAGGACCTCTGGAGCACCTGTGCTGTGACCTTGAAGAGGAGCCACAGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
ENST00000548932.5
ENST00000549125.5
ENST00000550181.5
ENST00000550342.1
CDS CCA 72 bp CTTCCCACATTCAGTGCACACGTGACACTTTGGCACTaGTGGGGCACGCTGCCGTTTCCTTGTGCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: LPTFSAHVTLWH*WGTLPFPCARA
Trigger: AGCCCTGGCACAAGGAAACGGCAGCGTGCCCCACCAGTGCCAAAGTGTCACGTGTGCACTGAATGTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CAA 90 bp CGCTGCCGTTTCCTTGTGCCAGGGCTCTCTCCAACCTCTTGGCCTTaGCAGGATTTGCCTTCTGCATGCACTCTCTGGTGGCTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: RCRFLVPGLSPTSWP*QDLPSACTLWWLAR
Trigger: TCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAGCCCTGGCACAAGGAAACGGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CAA 90 bp GCCTCCCACGGAGTTCTGTCCTCAGGGTTCGTCAATTACCTGGAATaGCGTAACCGCCCGTTACAGGCCAGACCGAGGCCGAGAGCGATT +
Preference number: 6 (lower is better)
Translates to: ASHGVLSSGFVNYLE*RNRPLQARPRPRAI
Trigger: AATCGCTCTCGGCCTCGGTCTGGCCTGTAACGGGCGGTTACGCAATTCCAGGTAATTGACGAACCCTGAGGACAGAACTCCGTGGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550181.5
CDS CCA 72 bp CTCTTCAAGGTCACAGCACAGGTGCTCCAGAGGTCCTaGTACTGTTCTCCATGGCCGCTCTTCCTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: LFKVTAQVLQRS*YCSPWPLFLAS
Trigger: GGAAGCCAGGAAGAGCGGCCATGGAGAACAGTACCAGGACCTCTGGAGCACCTGTGCTGTGACCTTGAAGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
ENST00000548932.5
ENST00000549125.5
ENST00000550181.5
ENST00000550342.1
CDS CAA 72 bp CCAGGGCTCTCTCCAACCTCTTGGCCTTTGCAGGATTaGCCTTCTGCATGCACTCTCTGGTGGCTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: PGLSPTSWPLQD*PSACTLWWLAR
Trigger: TCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CAA 72 bp GGAGTTCTGTCCTCAGGGTTCGTCAATTACCTGGAATaGCGTAACCGCCCGTTACAGGCCAGACCGAGGCCG +
Preference number: 6 (lower is better)
Translates to: GVLSSGFVNYLE*RNRPLQARPRP
Trigger: CGGCCTCGGTCTGGCCTGTAACGGGCGGTTACGCAATTCCAGGTAATTGACGAACCCTGAGGACAGAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550181.5
CDS GCA 72 bp CAGGGCTCTCTCCAACCTCTTGGCCTTTGCAGGATTTaGCTTCTGCATGCACTCTCTGGTGGCTGGCCAGAT +
Preference number: 6 (lower is better)
Translates to: QGSLQPLGLCRI*LLHALSGGWPD
Trigger: ATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAGAGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS GCA 72 bp GAGTTCTGTCCTCAGGGTTCGTCAATTACCTGGAATTaGGTAACCGCCCGTTACAGGCCAGACCGAGGCCGA +
Preference number: 6 (lower is better)
Translates to: EFCPQGSSITWN*VTARYRPDRGR
Trigger: TCGGCCTCGGTCTGGCCTGTAACGGGCGGTTACGCAATTCCAGGTAATTGACGAACCCTGAGGACAGAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550181.5
CDS CCA 72 bp CCCACGGAGTTCTGTCCTCAGGGTTCGTCAATTACCTaGAATTGCGTAACCGCCCGTTACAGGCCAGACCGA +
Preference number: 6 (lower is better)
Translates to: PTEFCPQGSSIT*NCVTARYRPDR
Trigger: TCGGTCTGGCCTGTAACGGGCGGTTACGCAATTCCAGGTAATTGACGAACCCTGAGGACAGAACTCCGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550181.5
CDS CAA 90 bp GGGACGGGAGCCTGCTCAGGGGTAAGGTTGCTTCTTCCCTTCTTCTaGTCACAGTGCCCCTGGAAAGGGTCAGATTTCAGAGAATCCGAG +
Preference number: 6 (lower is better)
Translates to: GTGACSGVRLLLPFF*SQCPWKGSDFRESE
Trigger: CTCGGATTCTCTGAAATCTGACCCTTTCCAGGGGCACTGTGACAAGAAGAAGGGAAGAAGCAACCTTACCCCTGAGCAGGCTCCCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS GCA 72 bp CTGGAGCTGCTGGGCATGGAATCCCAGCTCTCATCATaGTCCGGGTTCCAGAGAACAGTATCTTCAGACACG +
Preference number: 6 (lower is better)
Translates to: LELLGMESQLSS*SGFQRTVSSDT
Trigger: CGTGTCTGAAGATACTGTTCTCTGGAACCCGGAGCATGATGAGAGCTGGGATTCCATGCCCAGCAGCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
ENST00000549512.1
CDS GCA 72 bp CCAACCTCTTGGCCTTTGCAGGATTTGCCTTCTGCATaGACTCTCTGGTGGCTGGCCAGATGGGAGTTGCAT +
Preference number: 6 (lower is better)
Translates to: PTSWPLQDLPSA*TLWWLARWELH
Trigger: ATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS GCA 72 bp CTCTCCAACCTCTTGGCCTTTGCAGGATTTGCCTTCTaGATGCACTCTCTGGTGGCTGGCCAGATGGGAGTT +
Preference number: 6 (lower is better)
Translates to: LSNLLAFAGFAF*MHSLVAGQMGV
Trigger: AACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGGCCAAGAGGTTGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CAA 72 bp TCTGCATGCACTCTCTGGTGGCTGGCCAGATGGGAGTaGCATCGGAAATTCTTACCACACTCAGAGCACCTG +
Preference number: 6 (lower is better)
Translates to: SACTLWWLARWE*HRKFLPHSEHL
Trigger: CAGGTGCTCTGAGTGTGGTAAGAATTTCCGATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CAA 90 bp GATTTGCCTTCTGCATGCACTCTCTGGTGGCTGGCCAGATGGGAGTaGCATCGGAAATTCTTACCACACTCAGAGCACCTGCTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: DLPSACTLWWLARWE*HRKFLPHSEHLLVL
Trigger: CAAGACCAGCAGGTGCTCTGAGTGTGGTAAGAATTTCCGATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CCA 72 bp TATGTGACCCTCAGAATGTCCCTCTCCTCTAAGTCCTaGGGGTCAGGGACCCATTGTTCTTCTCCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: YVTLRMSLSSKS*GSGTHCSSPPS
Trigger: AGAAGGAGGAGAAGAACAATGGGTCCCTGACCCCCAGGACTTAGAGGAGAGGGACATTCTGAGGGTCACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000546874.1
ENST00000547026.6
ENST00000549512.1
CDS CCA 72 bp TTGCCTTCTGCATGCACTCTCTGGTGGCTGGCCAGATaGGAGTTGCATCGGAAATTCTTACCACACTCAGAG +
Preference number: 6 (lower is better)
Translates to: LPSACTLWWLAR*ELHRKFLPHSE
Trigger: CTCTGAGTGTGGTAAGAATTTCCGATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CCA 72 bp TGCAGGATTTGCCTTCTGCATGCACTCTCTGGTGGCTaGCCAGATGGGAGTTGCATCGGAAATTCTTACCAC +
Preference number: 6 (lower is better)
Translates to: CRICLLHALSGG*PDGSCIGNSYH
Trigger: GTGGTAAGAATTTCCGATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CAA 72 bp GCCTGCTCAGGGGTAAGGTTGCTTCTTCCCTTCTTCTaGTCACAGTGCCCCTGGAAAGGGTCAGATTTCAGA +
Preference number: 6 (lower is better)
Translates to: ACSGVRLLLPFF*SQCPWKGSDFR
Trigger: TCTGAAATCTGACCCTTTCCAGGGGCACTGTGACAAGAAGAAGGGAAGAAGCAACCTTACCCCTGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544117.6
CDS CCA 72 bp TTGCATTTCCTAAGATATTCACGCAGAGCCAGCACCTaGGCGGTTAAGGTGGTAGCCCTAACCTCGTTTCTC +
Preference number: 6 (lower is better)
Translates to: LHFLRYSRRAST*AVKVVALTSFL
Trigger: GAGAAACGAGGTTAGGGCTACCACCTTAACCGCCCAGGTGCTGGCTCTGCGTGAATATCTTAGGAAATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000548932.5
CDS CCA 72 bp CCTTTGCAGGATTTGCCTTCTGCATGCACTCTCTGGTaGCTGGCCAGATGGGAGTTGCATCGGAAATTCTTA +
Preference number: 6 (lower is better)
Translates to: PLQDLPSACTLW*LARWELHRKFL
Trigger: TAAGAATTTCCGATGCAACTCCCATCTGGCCAGCCACCAGAGAGTGCATGCAGAAGGCAAATCCTGCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CAA 72 bp CGGAAATTCTTACCACACTCAGAGCACCTGCTGGTCTaGTCATGTAGGTGGGTTTTCTGGTGCCTGATGAGG +
Preference number: 6 (lower is better)
Translates to: RKFLPHSEHLLV*SCRWVFWCLMR
Trigger: CCTCATCAGGCACCAGAAAACCCACCTACATGACAAGACCAGCAGGTGCTCTGAGTGTGGTAAGAATTTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS GCA 72 bp AGTTGCATCGGAAATTCTTACCACACTCAGAGCACCTaGTGGTCTTGTCATGTAGGTGGGTTTTCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: SCIGNSYHTQST*WSCHVGGFSGA
Trigger: GGCACCAGAAAACCCACCTACATGACAAGACCAGCAGGTGCTCTGAGTGTGGTAAGAATTTCCGATGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
CDS CCA 72 bp GCTCCGGGTTCCAGAGAACAGTATCTTCAGACACGCTaGATAACATTCTGGGAGGTTCTGCTTCTAGTTCAG +
Preference number: 6 (lower is better)
Translates to: APGSREQYLQTR*ITFWEVLLLVQ
Trigger: CTGAACTAGAAGCAGAACCTCCCAGAATGTTATCCAGCGTGTCTGAAGATACTGTTCTCTGGAACCCGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
ENST00000549512.1
CDS CCA 72 bp AGAGAACAGTATCTTCAGACACGCTGGATAACATTCTaGGAGGTTCTGCTTCTAGTTCAGGGGTATCCCCCT +
Preference number: 6 (lower is better)
Translates to: REQYLQTRWITF*EVLLLVQGYPP
Trigger: AGGGGGATACCCCTGAACTAGAAGCAGAACCTCCCAGAATGTTATCCAGCGTGTCTGAAGATACTGTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301042.7
ENST00000448928.7
ENST00000544117.6
ENST00000547026.6
ENST00000549512.1
CDS CCA 72 bp CTTCTCCTCCTTCTAGTTGAGAAAGCATGTCCAGTTTaGGAATTGGAAATCTCAGAGAGACTACTATCCCAC +
Preference number: 6 (lower is better)
Translates to: LLLLLVEKACPV*ELEISERLLSH
Trigger: GTGGGATAGTAGTCTCTCTGAGATTTCCAATTCCCAAACTGGACATGCTTTCTCAACTAGAAGGAGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301042.7
ENST00000544117.6
ENST00000546874.1
ENST00000547026.6