RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF638 (Homo sapiens)

Ensembl gene IDs: ENSG00000075292

Ensembl transcript IDs: ENST00000264447.9, ENST00000409407.4, ENST00000409544.5, ENST00000410075.5, ENST00000417778.5, ENST00000437658.2, ENST00000454122.1, ENST00000454278.5, ENST00000455226.5, ENST00000460310.1, ENST00000461991.3, ENST00000464375.5, ENST00000466330.5, ENST00000466975.5, ENST00000472758.5, ENST00000475743.1, ENST00000483421.7, ENST00000486494.1, ENST00000487638.5, ENST00000488126.2, ENST00000493576.6, ENST00000494241.5, ENST00000494621.5, ENST00000601581.3

Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTCTTTTCCCACCACCCTaGCTGATCTCCTACATCTCC +
Preference number: 2 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPLFPPP*LISYIS
Trigger: GGAGATGTAGGAGATCAGTCAGGGTGGTGGGAAAAG...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
3UTR-3UTR CCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTCTTTGCAAAACCTCCTaGACTTCCAAGAAGGTTTGC +
Preference number: 2 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPLCKTS*TSKKVC
Trigger: GCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAG...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
3UTR-3UTR TCA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCTCAGGTTTTGTTGATTaGAGAGTACAGATGTGCACA +
Preference number: 2 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLSGFVD*RVQMCT
Trigger: TGTGCACATCTGTACTCTTCAATCAACAAAACCTGA...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410075.5
3UTR-3UTR TCA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCTGCATCAGGTTTTGTTaGTTGAAGAGTACAGATGTG +
Preference number: 2 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLCIRFC*LKSTDV
Trigger: CACATCTGTACTCTTCAATCAACAAAACCTGATGCA...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410075.5
3UTR-3UTR CAA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCTTGCATCAGGTTTTGTaGATTGAAGAGTACAGATGT +
Preference number: 3 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSLHQVL*IEEYRC
Trigger: ACATCTGTACTCTTCAATCAACAAAACCTGATGCAA...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
3UTR GCA 72 bp AAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTaGGTCTCTCCTTATAACTTTTCCCACCACCCTGAC +
Preference number: 3 (lower is better)
Translates to: KLCKTSWTSKKV*VSPYNFSHHPD
Trigger: GTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCCGCGGCAGCCTGGGCTaGCGCCGGGGTGGTATTCCC +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARRGSLG*RRGGIP
Trigger: GGGAATACCACCCCGGCGGCAGCCCAGGCTGCCGCG...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCGCGGAATCCGGGCTCTaGGCGGCAGCCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARAESGL*AAAWAA
Trigger: GGCAGCCCAGGCTGCCGCGCAGAGCCCGGATTCCGC...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCTCTGCGCGGCAGCCTaGGCTGCCGCCGGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPALCAAA*AAAGVV
Trigger: TACCACCCCGGCGGCAGCCCAGGCTGCCGCGCAGAG...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGGGCTGCCGCCGGGGTaGTATTCCCGGCAGGAACGC +
Preference number: 4 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPGLPPG*YSRQER
Trigger: GCGTTCCTGCCGGGAATACCACCCCGGCGGCAGCCC...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTTCCCACCGGCTACCATaGGGCTTCCCCTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPSHRLP*GFPFFC
Trigger: ACAGAAGAAGGGGAAGCCTCATGGTAGCCGGTGGGA...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCGTCCAAAACCTGCGGTaGCCCGGCAGTCGCGGAATC +
Preference number: 4 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLVQNLR*PGSRGI
Trigger: GATTCCGCGACTGCCGGGGCACCGCAGGTTTTGGAC...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCCCTCATAAATGGTCCTaGAGGCCTCATCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSPHKWS*RPHPRR
Trigger: CCTTCTGGGATGAGGCCTCCAGGACCATTTATGAGG...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGTCCAGGCCTCATAAATaGTCCTGGAGGCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPASRPHK*SWRPHP
Trigger: GGGATGAGGCCTCCAGGACCATTTATGAGGCCTGGA...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCACGTGCTCTCCCTGCTaGGTAAAATCTTGGGAGACC +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARTCSPC*VKSWET
Trigger: GGTCTCCCAAGATTTTACCCAGCAGGGAGAGCACGT...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGGCTTTTGTGCTGGTaGATGTCCCTTATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSRLLCW*MSLISS
Trigger: GCTGCTGATAAGGGACATTCACCAGCACAAAAGCCT...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp CCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTCAGCGAGTCCAAAACCTaGGGTGCCCCGGCAGTCGCG +
Preference number: 4 (lower is better)
Translates to: PRRFASLLITFPTTLTDLSESKT*GAPAVA
Trigger: CGCGACTGCCGGGGCACCGCAGGTTTTGGACTCGCT...GAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCCAAAGGGAGACCGAATaGGAATGTCAGCCTGTGACT +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARQRETE*ECQPVT
Trigger: AGTCACAGGCTGACATTCCCATTCGGTCTCCCTTTG...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGACTGATGCAGATATATaGGGCTCATCATCCCACCGG +
Preference number: 4 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPATDADI*GSSSHR
Trigger: CCGGTGGGATGATGAGCCTCATATATCTGCATCAGT...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCCTGTTTCACTGCCACTaGTGCAGATATATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARLFHCH*CRYMRL
Trigger: GAGCCTCATATATCTGCATCAGTGGCAGTGAAACAG...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCCCTCTCAGGGCTAACTaGTCGAAAGCATTTTGGACT +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARPLRAN*SKAFWT
Trigger: AGTCCAAAATGCTTTCGATCAGTTAGCCCTGAGAGG...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTTCCACGTGCTCTCCCTaGTGGGTAAAATCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPSTCSP*WVKSWE
Trigger: CTCCCAAGATTTTACCCAGCAGGGAGAGCACGTGGA...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCTCGTGGCCTTTGAAGTaGAAAGTCTCCTCGAGGATT +
Preference number: 4 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSSWPLK*KVSSRI
Trigger: AATCCTCGAGGAGACTTTCCACTTCAAAGGCCACGA...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGAGGGTTAGGTGCTCGTaGCCTTTGAAGTGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPARVRCS*PLKWKV
Trigger: GACTTTCCACTTCAAAGGCCACGAGCACCTAACCCT...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCGGTGCTCGTGGCCTTTaGAGTGGAAAGTCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLGARGL*SGKSPR
Trigger: TCGAGGAGACTTTCCACTTCAAAGGCCACGAGCACC...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCTGTGGGATCCGCTCTTaGTGGCTTACAGATGAAATT +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARCGIRS*WLTDEI
Trigger: AATTTCATCTGTAAGCCAGCAAGAGCGGATCCCACA...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCACCTGGGTCTCGACATaGCTATTTTCAAGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARTWVST*LFSRKP
Trigger: AGGCTTTCTTGAAAATAGCCATGTCGAGACCCAGGT...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGTGCTGGGTAAAATCTTaGGAGACCCATAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPACWVKS*ETHRSR
Trigger: CCTGGATCTATGGGTCTCCCAAGATTTTACCCAGCA...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGAAAAGGACCGATTATTaGAGGACTCACCGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPAKRTDY*RTHRGS
Trigger: ACTTCCCCGGTGAGTCCTCCAATAATCGGTCCTTTT...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCATACATGTAATGCATTaGGCTTCGAGACCGACGGAA +
Preference number: 4 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSIHVMH*ASRPTE
Trigger: TTCCGTCGGTCTCGAAGCCCAATGCATTACATGTAT...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGAATGGTTTCTGTGTCTaGAGCAGGATTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPANGFCV*SRICSA
Trigger: GGCTGAGCAAATCCTGCTCCAGACACAGAAACCATT...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCCTTTGCAAAACCTCCTaGACTTCCAAGAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSLCKTS*TSKKVC
Trigger: GCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAG...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGACCGACGGAATCTGTaGCTTGAGCTTGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPDRRNL*LELDLL
Trigger: TAGAAGATCAAGCTCAAGTCACAGATTCCGTCGGTC...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCCGAACCATAATGCAATaGCTGTTCTTTCCGAAGCTT +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARRTIMQ*LFFPKL
Trigger: AAGCTTCGGAAAGAACAGTCATTGCATTATGGTTCG...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCCGACTCAGCAGAAGTTaGAGTAACAATTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARRLSRS*SNNFNS
Trigger: GCTGTTGAAATTGTTACTTCAACTTCTGCTGAGTCG...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp CCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTCTCCCACCACCCTGACTaGTCTCCTACATCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: PRRFASLLITFPTTLTDLSHHPD*SPTSPP
Trigger: AGGGGGAGATGTAGGAGATCAGTCAGGGTGGTGGGA...GAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCTGGGCCCAACAGAAGTaGGTTTGCAATGCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLWAQQK*VCNAQV
Trigger: AACCTGGGCATTGCAAACCCACTTCTGTTGGGCCCA...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTAAAGTGCAAAGGAGATaGGCCCAACAGAAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPKVQRR*AQQKWV
Trigger: AACCCACTTCTGTTGGGCCCATCTCCTTTGCACTTT...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCGTCTGGCTAACTGTTTaGTTAATGGATTGGTTGACG +
Preference number: 4 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSVWLTV*LMDWLT
Trigger: CGTCAACCAATCCATTAACCAAACAGTTAGCCAGAC...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGGGTTCCACTCTCAACTaGGAAAAAGGACCGATTATT +
Preference number: 4 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPAGSTLN*EKGPII
Trigger: AATAATCGGTCCTTTTTCTCAGTTGAGAGTGGAACC...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCTCAGGTTTTGTTGATTaGAGAGTACAGATGTGCACA +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARSGFVD*RVQMCT
Trigger: TGTGCACATCTGTACTCTTCAATCAACAAAACCTGA...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGAAGTGGGTTTGCAATaGCCAGGTTCAAGGAATTCA +
Preference number: 4 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPEVGLQ*PGSRNS
Trigger: TGAATTCCTTGAACCTGGGCATTGCAAACCCACTTC...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp CCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTCCCCAGAAGGGTTAGGTaGTCGTGGCCTTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PRRFASLLITFPTTLTDLPRRVR*SWPLKW
Trigger: CCACTTCAAAGGCCACGAGCACCTAACCCTTCTGGG...GAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGGTAGCCATATTTGCTTaGATGCCCATAATCGATCAC +
Preference number: 4 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPAVAIFA*MPIIDH
Trigger: GTGATCGATTATGGGCATGCAAGCAAATATGGCTAC...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTTCCGACGAAAAAGGTTaGTGGTTCATAGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPSDEKG*WFIDGG
Trigger: TCCTCCATCTATGAACCAGCAACCTTTTTCGTCGGA...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCAACATTCATTCTCTGTaGCCCCATGTTCTGATAAGA +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARNIHSL*PHVLIR
Trigger: TCTTATCAGAACATGGGGCCACAGAGAATGAATGTT...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGGACGAAAAAGGTTGCTaGTTCATAGATGGAGGAATC +
Preference number: 4 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPADEKGC*FIDGGI
Trigger: GATTCCTCCATCTATGAACCAGCAACCTTTTTCGTC...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGATCGATCACATTACTTaGAACTGCTTCACTACCAAG +
Preference number: 4 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPAIDHIT*NCFTTK
Trigger: CTTGGTAGTGAAGCAGTTTCAAGTAATGTGATCGAT...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTATGTTCTGCTGTGACTaGAATTCATTCTCGACCTCA +
Preference number: 4 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPMFCCD*NSFSTS
Trigger: TGAGGTCGAGAATGAATTTCAGTCACAGCAGAACAT...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp CCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTCCTAGGACTGGGGGAATaGGAACGTCTTCGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: PRRFASLLITFPTTLTDLLGLGE*ERLRGV
Trigger: AACTCCACGAAGACGTTCTCATTCCCCCAGTCCTAG...GAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp CCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTCCTTTTCCCACCACCCTaGCTGATCTCCTACATCTCC +
Preference number: 4 (lower is better)
Translates to: PRRFASLLITFPTTLTDLLFPPP*LISYIS
Trigger: GGAGATGTAGGAGATCAGTCAGGGTGGTGGGAAAAG...GAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCCAACAGAAGTGGGTTTaGAATGCCCAGGTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLQQKWV*NAQVQG
Trigger: TCCTTGAACCTGGGCATTGCAAACCCACTTCTGTTG...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTTGTACTTTGGGACTCTaGTCTGTAACCTGTGTTACA +
Preference number: 4 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPCTLGL*SVTCVT
Trigger: TGTAACACAGGTTACAGAGCAGAGTCCCAAAGTACA...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTCTGTGTAGCCATATTTaGTTGCATGCCCATAATCGA +
Preference number: 4 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPLCSHI*LHAHNR
Trigger: TCGATTATGGGCATGCAAGCAAATATGGCTACACAG...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCAATACGTACTTCAAGTaGATCTTCTGTGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARNTYFK*IFCVAI
Trigger: TATGGCTACACAGAAGATCCACTTGAAGTACGTATT...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCCTCGACCTCATCAGTTaGAATTTCAGGATCATAAAT +
Preference number: 4 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARLDLIS*NFRIIN
Trigger: ATTTATGATCCTGAAATTCCAACTGATGAGGTCGAG...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCGTTTGGTTAATGGATTaGTTGACGGATTTTATGGGT +
Preference number: 4 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSVWLMD*LTDFMG
Trigger: ACCCATAAAATCCGTCAACCAATCCATTAACCAAAC...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCCTAGAAATGAAACGATaGCAAATTCTTGGACTTCGA +
Preference number: 4 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSLEMKR*QILGLR
Trigger: TCGAAGTCCAAGAATTTGCCATCGTTTCATTTCTAG...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTTTCCGAAGCTTTCGCTaGAGAGAAACAGCTTTATCA +
Preference number: 4 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPFRSFR*RETALS
Trigger: TGATAAAGCTGTTTCTCTCCAGCGAAAGCTTCGGAA...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCGGCCTCTTCACCTTTTaGTGGTTCTGTCACAACAGC +
Preference number: 4 (lower is better)
Translates to: SFLSPNHLELLSSASFCSGLFTF*WFCHNS
Trigger: GCTGTTGTGACAGAACCAGCAAAAGGTGAAGAGGCC...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR CCA 90 bp CTTCCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATGCCAGCAAATCTGTGTaGAATTCCACGTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LPRRFASLLITFPTTLTDASKSV*NSTCSP
Trigger: GGGAGAGCACGTGGAATTCCACACAGATTTGCTGGC...ATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGTTCTTTGGTCAATCTTaGATCAGTTCTGTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPAFFGQS*ISSVLS
Trigger: ACTCAACACAGAACTGATCCAAGATTGACCAAAGAA...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCGTAAGCCTGACATCTTaGTTCCACTCTCAACTGAGA +
Preference number: 4 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLVSLTS*FHSQLR
Trigger: TCTCAGTTGAGAGTGGAACCAAGATGTCAGGCTTAC...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTTTGCTGGTTCATAGATaGAGGAATCAGAGATTGACT +
Preference number: 4 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPLLVHR*RNQRLT
Trigger: AGTCAATCTCTGATTCCTCCATCTATGAACCAGCAA...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTCATCATAGAAGGAGTTaGAAGTCTCTTCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPHHRRS*KSLHLL
Trigger: CAGAAGATGAAGAGACTTCCAACTCCTTCTATGATG...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCCTCATTTCTTCTCGATaGGAGGATCTCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLLISSR*EDLRIP
Trigger: TGGAATCCTGAGATCCTCCCATCGAGAAGAAATGAG...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCATGAGAACGTCTTCGTaGAGTTTCATTTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSMRTSS*SFIFFS
Trigger: AGAAAAGAAAATGAAACTCCACGAAGACGTTCTCAT...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCTGGACTACCTCTAAATaGATTTCTAATTCGATATGG +
Preference number: 4 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSWTTSK*ISNSIW
Trigger: CCATATCGAATTAGAAATCCATTTAGAGGTAGTCCA...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp CCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTCCAATCAGGATACTGTTaGCGTAACTGTCGACAGCTC +
Preference number: 4 (lower is better)
Translates to: PRRFASLLITFPTTLTDLQSGYC*RNCRQL
Trigger: GAGCTGTCGACAGTTACGTCAACAGTATCCTGATTG...GAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp CTTCCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATGTGTGGAATTCCACGTaGTCTCCCTGCTGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LPRRFASLLITFPTTLTDVWNST*SPCWVK
Trigger: TTTTACCCAGCAGGGAGAGCACGTGGAATTCCACAC...ATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTCACGATGGCAAATTCTTaGACTTCGACTTCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: PRRFASLLITFPTTLTDLTMANS*TSTSRP
Trigger: AGGCCGAGAAGTCGAAGTCCAAGAATTTGCCATCGT...GAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp CCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTCTCTAATTCGATATGGTaGACGGGATCTGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: PRRFASLLITFPTTLTDLSNSIW*TGSGSG
Trigger: TCCAGATCCAGATCCCGTTCACCATATCGAATTAGA...GAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCTTAAATTCTGTCCCATaGCCAGATCGTTGTACTACA +
Preference number: 4 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLLNSVP*PDRCTT
Trigger: TGTAGTACAACGATCTGGGCATGGGACAGAATTTAA...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCAGTCTTCAGTCTTCTTaGGTTTTCGCTCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SFLSPNHLELLSSASFCSSLQSS*VFALVL
Trigger: CAGAACCAGAGCGAAAACGCAAGAAGACTGAAGACT...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR CCA 90 bp CTTCCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCCGGGGAAGTCCATTTaGCGAAATACGTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: LPRRFASLLITFPTTLTDPGKSI*RNTSST
Trigger: TGTTGAAGACGTATTTCGCCAAATGGACTTCCCCGG...ATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp CTTCCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATGGAGGAATCAGAGATTaGCTCATTGTCTGGCTAACT +
Preference number: 4 (lower is better)
Translates to: LPRRFASLLITFPTTLTDGGIRD*LIVWLT
Trigger: AGTTAGCCAGACAATGAGTCAATCTCTGATTCCTCC...ATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR GCA 90 bp CTAGTGAATTCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCACAGACGCCACTGATTTaGCTGAAGAAGAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LVNSFLSPNHLELLSSASQTPLI*LKKSLQ
Trigger: CTGAAGACTCTTCTTCAGGCAAATCAGTGGCGTCTG...TGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGAATTCACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR GCA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCTCTTCAGCCTCATTCTaGTCCTTTTCCTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SFLSPNHLELLSSASFCSSSASF*SFSFLC
Trigger: GCAAAGAAAGGAAAAGGAGCAGAATGAGGCTGAAGA...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR CCA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCAACATTCTCATTTACTaGACCCACTTGGGACAAGGA +
Preference number: 4 (lower is better)
Translates to: SFLSPNHLELLSSASFCSNILIY*THLGQG
Trigger: TCCTTGTCCCAAGTGGGTCCAGTAAATGAGAATGTT...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR CCA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCCTCTTCACCTTTTGCTaGTTCTGTCACAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: SFLSPNHLELLSSASFCSLFTFC*FCHNSF
Trigger: AAAGCTGTTGTGACAGAACCAGCAAAAGGTGAAGAG...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR CCA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCGAAGAGGGAACAAATTaGACAGAAGAATCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SFLSPNHLELLSSASFCSEEGTN*TEESSL
Trigger: AAGGCTGGATTCTTCTGTCCAATTTGTTCCCTCTTC...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR TCA 90 bp CTTCCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATGGGAATGTCAGCCTGTaGCTGGTAATTCTTTTTACT +
Preference number: 4 (lower is better)
Translates to: LPRRFASLLITFPTTLTDGNVSL*LVILFT
Trigger: AGTAAAAAGAATTACCAGTCACAGGCTGACATTCCC...ATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp CTTCCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATGCTTGTAGGTTTAACTaGTGGTTTTGTTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LPRRFASLLITFPTTLTDACRFN*WFCSTA
Trigger: AGCAGTGGAACAAAACCATCAGTTAAACCTACAAGC...ATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCCATTGCTTTTTCACCTaGGTAGAAGAGGGAACAAAT +
Preference number: 4 (lower is better)
Translates to: SFLSPNHLELLSSASFCSHCFFT*VEEGTN
Trigger: ATTTGTTCCCTCTTCTACTCAGGTGAAAAAGCAATG...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR GCA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCATGAGACTAGTGATCTaGAGAATCTACTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SFLSPNHLELLSSASFCSMRLVI*RIYSGK
Trigger: TTTGCCAGAGTAGATTCTGCAGATCACTAGTCTCAT...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR CCA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCATTACATATCACATTTaGATTGGGAACAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLITYHI*IGNRCR
Trigger: TCTGCATCTGTTCCCAATCCAAATGTGATATGTAAT...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCTTTACTGGACCCACTTaGGACAAGGATTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SFLSPNHLELLSSASFCSFTGPT*DKDSSF
Trigger: AAAACTTGAATCCTTGTCCCAAGTGGGTCCAGTAAA...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR TCA 90 bp CCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTCCTTTTTACTTCCTCTTaGTCCAACATGTACGTTAGA +
Preference number: 4 (lower is better)
Translates to: PRRFASLLITFPTTLTDLLFTSS*SNMYVR
Trigger: TCTAACGTACATGTTGGATCAAGAGGAAGTAAAAAG...GAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR TCA 90 bp CTAGTGAATTCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCACACAACAGCTTTTTCTaGTGGCAGAGTTTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LVNSFLSPNHLELLSSASHNSFF*WQSFPN
Trigger: ATTGGGAAAACTCTGCCATCAGAAAAAGCTGTTGTG...TGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGAATTCACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR GCA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCTATGACGTGTACTCTTaGAGTGATTTGTCATTGCTT +
Preference number: 4 (lower is better)
Translates to: SFLSPNHLELLSSASFCSYDVYS*SDLSLL
Trigger: AAGCAATGACAAATCACTGCAAGAGTACACGTCATA...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR CCA 90 bp CCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTCCAAGGAATTCACAAGTaGTGCGAAATTTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PRRFASLLITFPTTLTDLQGIHK*CEIFQE
Trigger: TTCTTGGAAAATTTCGCACCACTTGTGAATTCCTTG...GAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CTAGTGAATTCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATCAACTTCACTCATCTaGAAGGCCTCTTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: LVNSFLSPNHLELLSSASSTSLI*KASSPF
Trigger: AAAAGGTGAAGAGGCCTTCCAGATGAGTGAAGTTGA...TGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGAATTCACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR TCA 90 bp CTTCCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATATCCAATCCTTCAAATaGCTACATTCTACGTTACAC +
Preference number: 4 (lower is better)
Translates to: LPRRFASLLITFPTTLTDIQSFK*LHSTLH
Trigger: GTGTAACGTAGAATGTAGTCATTTGAAGGATTGGAT...ATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CCA 90 bp CTAGTGAATTCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCACTGCAGAATCTACTCTaGCAAATGTTGCTCAGTATT +
Preference number: 4 (lower is better)
Translates to: LVNSFLSPNHLELLSSASLQNLL*QMLLSI
Trigger: AATACTGAGCAACATTTGCCAGAGTAGATTCTGCAG...TGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGAATTCACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS CCA 90 bp TGCGGTGCCCCGGCAGTCGCGGAATCCGGGCTCTGCGCGGCAGCCTaGGCTGCCGCCGGGGTGGTATTCCCGGCAGGAACGCCGTCCCGG +
Preference number: 5 (lower is better)
Translates to: CGAPAVAESGLCAAA*AAAGVVFPAGTPSR
Trigger: CCGGGACGGCGTTCCTGCCGGGAATACCACCCCGGCGGCAGCCCAGGCTGCCGCGCAGAGCCCGGATTCCGCGACTGCCGGGGCACCGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410075.5
ENST00000466975.5
ENST00000494621.5
CDS GCA 90 bp CAGCCTCCAGTCTCGACGCCGAAAACGCTACCGCCTCCAAAGAGCTaGACGCATGCGCGCCTCCCAGCTCCTGCGAGCCCTCGTAGGCTC +
Preference number: 5 (lower is better)
Translates to: QPPVSTPKTLPPPKS*THARLPAPASPRRL
Trigger: GAGCCTACGAGGGCTCGCAGGAGCTGGGAGGCGCGCATGCGTGCAGCTCTTTGGAGGCGGTAGCGTTTTCGGCGTCGAGACTGGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437658.2
CDS GCA 90 bp AGGATTCCAATCAGGATACCGCTTCAGCGAGTCCAAAACCTGCGGTaGCCCGGCAGTCGCGGAATCCGGGCTCTGCGCGGCAGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: RIPIRIPLQRVQNLR*PGSRGIRALRGSLG
Trigger: GCCCAGGCTGCCGCGCAGAGCCCGGATTCCGCGACTGCCGGGGCACCGCAGGTTTTGGACTCGCTGAAGCGGTATCCTGATTGGAATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466975.5
CDS GCA 90 bp TTTGATGCTGAATCCAATCCGCTTCAGCGAGTCCAAAACCTGCGGTaGCCCGGCAGTCGCGGAATCCGGGCTCTGCGCGGCAGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: FDAESNPLQRVQNLR*PGSRGIRALRGSLG
Trigger: GCCCAGGCTGCCGCGCAGAGCCCGGATTCCGCGACTGCCGGGGCACCGCAGGTTTTGGACTCGCTGAAGCGGATTGGATTCAGCATCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466330.5
ENST00000494621.5
CDS TCA 90 bp GGTCCTGGAGGCCTCATCCCAGAAGGGTTAGGTGCTCGTGGCCTTTaGAGTGGAAAGTCTCCTCGAGGATTAAACCTGGGTCTCGACATG +
Preference number: 5 (lower is better)
Translates to: GPGGLIPEGLGARGL*SGKSPRGLNLGLDM
Trigger: CATGTCGAGACCCAGGTTTAATCCTCGAGGAGACTTTCCACTTCAAAGGCCACGAGCACCTAACCCTTCTGGGATGAGGCCTCCAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS-3UTR CAA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCACCGGGGAAGTCCATTaGGCGAAATACGTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARTGEVH*AKYVFN
Trigger: GTTGAAGACGTATTTCGCCAAATGGACTTCCCCGGT...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS CCA 90 bp TGCTGGGTAAAATCTTGGGAGACCCATAGATCCAGGCCTCATAAATaGTCCTGGAGGCCTCATCCCAGAAGGGTTAGGTGCTCGTGGCCT +
Preference number: 5 (lower is better)
Translates to: CWVKSWETHRSRPHK*SWRPHPRRVRCSWP
Trigger: AGGCCACGAGCACCTAACCCTTCTGGGATGAGGCCTCCAGGACCATTTATGAGGCCTGGATCTATGGGTCTCCCAAGATTTTACCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454278.5
ENST00000455226.5
CDS-3UTR CAA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCTGTAAGCCTGACATCTaGGTTCCACTCTCAACTGAG +
Preference number: 5 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSCKPDI*VPLSTE
Trigger: CTCAGTTGAGAGTGGAACCAAGATGTCAGGCTTACA...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS CCA 90 bp TGGAGGCCTCATCCCAGAAGGGTTAGGTGCTCGTGGCCTTTGAAGTaGAAAGTCTCCTCGAGGATTAAACCTGGGTCTCGACATGGCTAT +
Preference number: 5 (lower is better)
Translates to: WRPHPRRVRCSWPLK*KVSSRIKPGSRHGY
Trigger: ATAGCCATGTCGAGACCCAGGTTTAATCCTCGAGGAGACTTTCCACTTCAAAGGCCACGAGCACCTAACCCTTCTGGGATGAGGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000417778.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS-3UTR CAA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGAAGTATAAGGTGGTGTaGAACCATGTGAGGCAACGG +
Preference number: 5 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPAKYKVV*NHVRQR
Trigger: CCGTTGCCTCACATGGTTCAACACCACCTTATACTT...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCAGGTGCTCGTGGCCTTaGAAGTGGAAAGTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLRCSWP*KWKVSS
Trigger: CGAGGAGACTTTCCACTTCAAAGGCCACGAGCACCT...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCTTGAGGCACTCTCTTTaGTATAGCGGCTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSLRHSL*YSGSVL
Trigger: AAGTACAGAGCCGCTATACAAAAGAGAGTGCCTCAA...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGTTCCGACGAAAAAGGTaGCTGGTTCATAGATGGAGG +
Preference number: 5 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPAFRRKR*LVHRWR
Trigger: CCTCCATCTATGAACCAGCAACCTTTTTCGTCGGAA...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCCAGCATGTGAAAACTTaGGTAGCCAGGATGCTTTCA +
Preference number: 5 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARQHVKT*VARMLS
Trigger: TGAAAGCATCCTGGCTACCAAAGTTTTCACATGCTG...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS GCA 90 bp AGGCCTCATAAATGGTCCTGGAGGCCTCATCCCAGAAGGGTTAGGTaGTCGTGGCCTTTGAAGTGGAAAGTCTCCTCGAGGATTAAACCT +
Preference number: 5 (lower is better)
Translates to: RPHKWSWRPHPRRVR*SWPLKWKVSSRIKP
Trigger: AGGTTTAATCCTCGAGGAGACTTTCCACTTCAAAGGCCACGAGCACCTAACCCTTCTGGGATGAGGCCTCCAGGACCATTTATGAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS CCA 90 bp CATAAATGGTCCTGGAGGCCTCATCCCAGAAGGGTTAGGTGCTCGTaGCCTTTGAAGTGGAAAGTCTCCTCGAGGATTAAACCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: HKWSWRPHPRRVRCS*PLKWKVSSRIKPGS
Trigger: AGACCCAGGTTTAATCCTCGAGGAGACTTTCCACTTCAAAGGCCACGAGCACCTAACCCTTCTGGGATGAGGCCTCCAGGACCATTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS CCA 90 bp GTAAAATCTTGGGAGACCCATAGATCCAGGCCTCATAAATGGTCCTaGAGGCCTCATCCCAGAAGGGTTAGGTGCTCGTGGCCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: VKSWETHRSRPHKWS*RPHPRRVRCSWPLK
Trigger: CTTCAAAGGCCACGAGCACCTAACCCTTCTGGGATGAGGCCTCCAGGACCATTTATGAGGCCTGGATCTATGGGTCTCCCAAGATTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454278.5
ENST00000455226.5
CDS-3UTR CAA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCTGTCTGGCTAACTGTTaGGTTAATGGATTGGTTGAC +
Preference number: 5 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARCLANC*VNGLVD
Trigger: GTCAACCAATCCATTAACCAAACAGTTAGCCAGACA...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp CCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTCTTCCGTCGTGATCCCTaGCAGTGTTCCTCACGAGGG +
Preference number: 5 (lower is better)
Translates to: PRRFASLLITFPTTLTDLFRRDP*QCSSRG
Trigger: CCCTCGTGAGGAACACTGCAAGGGATCACGACGGAA...GAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS CCA 90 bp AAATCTGTGTGGAATTCCACGTGCTCTCCCTGCTGGGTAAAATCTTaGGAGACCCATAGATCCAGGCCTCATAAATGGTCCTGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: KSVWNSTCSPCWVKS*ETHRSRPHKWSWRP
Trigger: AGGCCTCCAGGACCATTTATGAGGCCTGGATCTATGGGTCTCCCAAGATTTTACCCAGCAGGGAGAGCACGTGGAATTCCACACAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454278.5
ENST00000455226.5
CDS CCA 90 bp CTGTGGCCCCATGTTCTGATAAGATTCATGGCCAGCAAATCTGTGTaGAATTCCACGTGCTCTCCCTGCTGGGTAAAATCTTGGGAGACC +
Preference number: 5 (lower is better)
Translates to: LWPHVLIRFMASKSV*NSTCSPCWVKSWET
Trigger: GGTCTCCCAAGATTTTACCCAGCAGGGAGAGCACGTGGAATTCCACACAGATTTGCTGGCCATGAATCTTATCAGAACATGGGGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
CDS-3UTR CAA 90 bp GGCCTGGAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCTTTCTTTGGTCAATCTaGGATCAGTTCTGTGTTGAG +
Preference number: 5 (lower is better)
Translates to: GLEPTQSVGNCHPHRLGSFLWSI*DQFCVE
Trigger: CTCAACACAGAACTGATCCAAGATTGACCAAAGAAA...GCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCTGTTTGGTTAATGGATaGGTTGACGGATTTTATGGG +
Preference number: 5 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARCLVNG*VDGFYG
Trigger: CCCATAAAATCCGTCAACCAATCCATTAACCAAACA...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS CCA 90 bp TTCATGGCCAGCAAATCTGTGTGGAATTCCACGTGCTCTCCCTGCTaGGTAAAATCTTGGGAGACCCATAGATCCAGGCCTCATAAATGG +
Preference number: 5 (lower is better)
Translates to: FMASKSVWNSTCSPC*VKSWETHRSRPHKW
Trigger: CCATTTATGAGGCCTGGATCTATGGGTCTCCCAAGATTTTACCCAGCAGGGAGAGCACGTGGAATTCCACACAGATTTGCTGGCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454278.5
ENST00000455226.5
CDS-3UTR CAA 90 bp CCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGTGGTTAATGGATTGGTaGACGGATTTTATGGGTTCA +
Preference number: 5 (lower is better)
Translates to: PTQSVGNCHPHRLGSSPAWLMDW*TDFMGS
Trigger: TGAACCCATAAAATCCGTCAACCAATCCATTAACCA...CGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCTATACATGTAATGCATaGGGCTTCGAGACCGACGGA +
Preference number: 5 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLYTCNA*GFETDG
Trigger: TCCGTCGGTCTCGAAGCCCAATGCATTACATGTATA...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp ACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTGCGCGCCAATTTCAACAGCTTTaGAAGCATCTGCATCTCTTT +
Preference number: 5 (lower is better)
Translates to: TQSVGNCHPHRLGSSPARQFQQL*KHLHLF
Trigger: AAAGAGATGCAGATGCTTCAAAAGCTGTTGAAATTG...GCGCGCAGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCTGTCTGGAGCAGGATTaGCTCAGCCTTGTAAGTTGT +
Preference number: 5 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLCLEQD*LSLVSC
Trigger: ACAACTTACAAGGCTGAGCAAATCCTGCTCCAGACA...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS TCA 90 bp ACTCTGCTCTGTAACCTGTGTTACAGAACTCTGTTTCACTGCCACTaGTGCAGATATATGAGGCTCATCATCCCACCGGCTACCATGAGG +
Preference number: 5 (lower is better)
Translates to: TLLCNLCYRTLFHCH*CRYMRLIIPPATMR
Trigger: CCTCATGGTAGCCGGTGGGATGATGAGCCTCATATATCTGCATCAGTGGCAGTGAAACAGAGTTCTGTAACACAGGTTACAGAGCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
CDS GCA 90 bp AGATTCATGGCCAGCAAATCTGTGTGGAATTCCACGTGCTCTCCCTaGTGGGTAAAATCTTGGGAGACCCATAGATCCAGGCCTCATAAA +
Preference number: 5 (lower is better)
Translates to: RFMASKSVWNSTCSP*WVKSWETHRSRPHK
Trigger: TTTATGAGGCCTGGATCTATGGGTCTCCCAAGATTTTACCCAGCAGGGAGAGCACGTGGAATTCCACACAGATTTGCTGGCCATGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454278.5
ENST00000455226.5
CDS GCA 90 bp GTTCTGATAAGATTCATGGCCAGCAAATCTGTGTGGAATTCCACGTaGTCTCCCTGCTGGGTAAAATCTTGGGAGACCCATAGATCCAGG +
Preference number: 5 (lower is better)
Translates to: VLIRFMASKSVWNST*SPCWVKSWETHRSR
Trigger: CCTGGATCTATGGGTCTCCCAAGATTTTACCCAGCAGGGAGAGCACGTGGAATTCCACACAGATTTGCTGGCCATGAATCTTATCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
CDS CCA 90 bp CTGAAGCGCCAACTGAGTCTTAATCTGAGCAAAGTGCAAAGGAGATaGGCCCAACAGAAGTGGGTTTGCAATGCCCAGGTTCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: LKRQLSLNLSKVQRR*AQQKWVCNAQVQGI
Trigger: AATTCCTTGAACCTGGGCATTGCAAACCCACTTCTGTTGGGCCCATCTCCTTTGCACTTTGCTCAGATTAAGACTCAGTTGGCGCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000417778.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS-3UTR CAA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCTGGAGGAATCAGAGATaGACTCATTGTCTGGCTAAC +
Preference number: 5 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLWRNQR*THCLAN
Trigger: GTTAGCCAGACAATGAGTCAATCTCTGATTCCTCCA...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS TCA 90 bp TGTTATATCTCTGTAATCCAGTTTAGAAAGCTTGCCTTGCAGGGCTaGGATCCTTCCACTGCCTCCTCTGGTAAGACTGCTCTGAGTAGG +
Preference number: 5 (lower is better)
Translates to: CYISVIQFRKLALQG*DPSTASSGKTALSR
Trigger: CCTACTCAGAGCAGTCTTACCAGAGGAGGCAGTGGAAGGATCTCAGCCCTGCAAGGCAAGCTTTCTAAACTGGATTACAGAGATATAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS GCA 90 bp GAGCAAAGTGCAAAGGAGATGGGCCCAACAGAAGTGGGTTTGCAATaGCCAGGTTCAAGGAATTCACAAGTGGTGCGAAATTTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: EQSAKEMGPTEVGLQ*PGSRNSQVVRNFPR
Trigger: TCTTGGAAAATTTCGCACCACTTGTGAATTCCTTGAACCTGGGCATTGCAAACCCACTTCTGTTGGGCCCATCTCCTTTGCACTTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000417778.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS CCA 90 bp AGTCTTAATCTGAGCAAAGTGCAAAGGAGATGGGCCCAACAGAAGTaGGTTTGCAATGCCCAGGTTCAAGGAATTCACAAGTGGTGCGAA +
Preference number: 5 (lower is better)
Translates to: SLNLSKVQRRWAQQK*VCNAQVQGIHKWCE
Trigger: TTCGCACCACTTGTGAATTCCTTGAACCTGGGCATTGCAAACCCACTTCTGTTGGGCCCATCTCCTTTGCACTTTGCTCAGATTAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000417778.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS CCA 90 bp GGTGACAAGTTTTTCATCGGGACTCCTTTAAACTACTACAATTTCTaGTCCTGGCCCCAAACTTCGCCTATGCCTACCCGACTAACAGCT +
Preference number: 5 (lower is better)
Translates to: GDKFFIGTPLNYYNF*SWPQTSPMPTRLTA
Trigger: AGCTGTTAGTCGGGTAGGCATAGGCGAAGTTTGGGGCCAGGACCAGAAATTGTAGTAGTTTAAAGGAGTCCCGATGAAAAACTTGTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417778.5
CDS CCA 90 bp TTCCGGCTTTGCATCACCAGAGAGCAGAGCAAGGAACAAATTATCTaGAGTGAATGGTTTCTGTGTCTGGAGCAGGATTTGCTCAGCCTT +
Preference number: 5 (lower is better)
Translates to: FRLCITREQSKEQII*SEWFLCLEQDLLSL
Trigger: AAGGCTGAGCAAATCCTGCTCCAGACACAGAAACCATTCACTCCAGATAATTTGTTCCTTGCTCTGCTCTCTGGTGATGCAAAGCCGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp GAGCCAACACAATCTGTAGGTAATTGTCACCCCCACCGCCTTGGGAGCAGTCCTAATCGATCACATTACTaGAAACTGCTTCACTACCAA +
Preference number: 5 (lower is better)
Translates to: EPTQSVGNCHPHRLGSSPNRSHY*KLLHYQ
Trigger: TTGGTAGTGAAGCAGTTTCAAGTAATGTGATCGATT...AGGACTGCTCCCAAGGCGGTGGGGGTGACAATTACCTACAGATTGTGTTGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp CTTCCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATAACGATGGCAAATTCTaGGACTTCGACTTCTCGGCC +
Preference number: 5 (lower is better)
Translates to: LPRRFASLLITFPTTLTDNDGKF*DFDFSA
Trigger: GGCCGAGAAGTCGAAGTCCAAGAATTTGCCATCGTT...ATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCGAGTCTTCAGTCTTCTaGCGTTTTCGCTCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: SFLSPNHLELLSSASFCSESSVF*RFRSGS
Trigger: AGAACCAGAGCGAAAACGCAAGAAGACTGAAGACTC...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR CAA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCTCAGACGCCACTGATTaGCCTGAAGAAGAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SFLSPNHLELLSSASFCSSDATD*PEEESS
Trigger: TGAAGACTCTTCTTCAGGCAAATCAGTGGCGTCTGA...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR CAA 90 bp CTTCCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATTTCTCTCCCGAAGCTTaGCAAAACCTCCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: LPRRFASLLITFPTTLTDFSPEA*QNLLDF
Trigger: GAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAGAA...ATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS TCA 90 bp GCTTTGCATCACCAGAGAGCAGAGCAAGGAACAAATTATCTGGAGTaGATGGTTTCTGTGTCTGGAGCAGGATTTGCTCAGCCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: ALHHQRAEQGTNYLE*MVSVSGAGFAQPCK
Trigger: CTTACAAGGCTGAGCAAATCCTGCTCCAGACACAGAAACCATTCACTCCAGATAATTTGTTCCTTGCTCTGCTCTCTGGTGATGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS GCA 90 bp AATCTGAGCAAAGTGCAAAGGAGATGGGCCCAACAGAAGTGGGTTTaGAATGCCCAGGTTCAAGGAATTCACAAGTGGTGCGAAATTTTC +
Preference number: 5 (lower is better)
Translates to: NLSKVQRRWAQQKWV*NAQVQGIHKWCEIF
Trigger: GAAAATTTCGCACCACTTGTGAATTCCTTGAACCTGGGCATTGCAAACCCACTTCTGTTGGGCCCATCTCCTTTGCACTTTGCTCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000417778.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS CCA 90 bp CTGACATCTTGGTTCCACTCTCAACTGAGAAAAAGGACCGATTATTaGAGGACTCACCGGGGAAGTCCATTTGGCGAAATACGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: LTSWFHSQLRKRTDY*RTHRGSPFGEIRLQ
Trigger: TTGAAGACGTATTTCGCCAAATGGACTTCCCCGGTGAGTCCTCCAATAATCGGTCCTTTTTCTCAGTTGAGAGTGGAACCAAGATGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS-3UTR CAA 90 bp CTAGTGAATTCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCAAGGCCTCTTCACCTTTaGCTGGTTCTGTCACAACAG +
Preference number: 5 (lower is better)
Translates to: LVNSFLSPNHLELLSSASRPLHL*LVLSQQ
Trigger: CTGTTGTGACAGAACCAGCAAAAGGTGAAGAGGCCT...TGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGAATTCACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR CAA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCAGAAGAGGGAACAAATaGGACAGAAGAATCCAGCCT +
Preference number: 5 (lower is better)
Translates to: SFLSPNHLELLSSASFCSRRGNK*DRRIQP
Trigger: AGGCTGGATTCTTCTGTCCAATTTGTTCCCTCTTCT...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS GCA 90 bp GTACAAGAAAGTCTAATTCCTCAGGGACATCAGACGCCACTGATTTaGCTGAAGAAGAGTCTTCAGTCTTCTTGCGTTTTCGCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: VQESLIPQGHQTPLI*LKKSLQSSCVFALV
Trigger: AACCAGAGCGAAAACGCAAGAAGACTGAAGACTCTTCTTCAGGCAAATCAGTGGCGTCTGATGTCCCTGAGGAATTAGACTTTCTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000460310.1
ENST00000461991.3
ENST00000472758.5
ENST00000483421.7
ENST00000487638.5
ENST00000488126.2
ENST00000493576.6
CDS CCA 90 bp GTTCAAGGACTGACTGTCCTCCTGAAATGTGTAAGCCTGACATCTTaGTTCCACTCTCAACTGAGAAAAAGGACCGATTATTGGAGGACT +
Preference number: 5 (lower is better)
Translates to: VQGLTVLLKCVSLTS*FHSQLRKRTDYWRT
Trigger: AGTCCTCCAATAATCGGTCCTTTTTCTCAGTTGAGAGTGGAACCAAGATGTCAGGCTTACACATTTCAGGAGGACAGTCAGTCCTTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CCA 90 bp TGCATCACCAGAGAGCAGAGCAAGGAACAAATTATCTGGAGTGAATaGTTTCTGTGTCTGGAGCAGGATTTGCTCAGCCTTGTAAGTTGT +
Preference number: 5 (lower is better)
Translates to: CITREQSKEQIIWSE*FLCLEQDLLSLVSC
Trigger: ACAACTTACAAGGCTGAGCAAATCCTGCTCCAGACACAGAAACCATTCACTCCAGATAATTTGTTCCTTGCTCTGCTCTCTGGTGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp CTTCCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTTCCCCTTCTTCTGTaGTGCTTCATGAAAATCCAG +
Preference number: 5 (lower is better)
Translates to: LPRRFASLLITFPTTLTDLPLLL*CFMKIQ
Trigger: CTGGATTTTCATGAAGCACAACAGAAGAAGGGGAAG...ATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp CTCTCCCGAAGCTTTGCAAAACCTCCTGGACTTCCAAGAAGGTTTGCGTCTCTCAATTACATATCACATTaGGATTGGGAACAGATGCAG +
Preference number: 5 (lower is better)
Translates to: LSRSFAKPPGLPRRFASLNYISH*DWEQMQ
Trigger: CTGCATCTGTTCCCAATCCAAATGTGATATGTAATT...GAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS CCA 90 bp TCTTGGATCAGTTCTGTGTTGAGTTACCTGAACATTCATTCTCTGTaGCCCCATGTTCTGATAAGATTCATGGCCAGCAAATCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: SWISSVLSYLNIHSL*PHVLIRFMASKSVW
Trigger: CCACACAGATTTGCTGGCCATGAATCTTATCAGAACATGGGGCCACAGAGAATGAATGTTCAGGTAACTCAACACAGAACTGATCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
CDS-3UTR CAA 90 bp CTTCCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATTGTAGCCATATTTGCTaGCATGCCCATAATCGATCA +
Preference number: 5 (lower is better)
Translates to: LPRRFASLLITFPTTLTDCSHIC*HAHNRS
Trigger: TGATCGATTATGGGCATGCAAGCAAATATGGCTACA...ATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp CCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTCTCTCGACCTCATCAGTaGGAATTTCAGGATCATAAA +
Preference number: 5 (lower is better)
Translates to: PRRFASLLITFPTTLTDLSRPHQ*EFQDHK
Trigger: TTTATGATCCTGAAATTCCAACTGATGAGGTCGAGA...GAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp TCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATTCTGCTCCCCAATTCTAACTCTCTaGGTTGGAGTTTTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: SFLSPNHLELLSSASFCSPILTL*VGVLAV
Trigger: AACAGCTAAAACTCCAACCAAGAGAGTTAGAATTGG...GGAGCAGAATGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS TCA 90 bp AGTTACCAAGCGTTCCTGTTTGAGGAGATCTTGTTCTTCAGCCACTaGCAGAACAGTAACATCTTTAGGTTCACTGTGGGAAATGCAATC +
Preference number: 5 (lower is better)
Translates to: SYQAFLFEEILFFSH*QNSNIFRFTVGNAI
Trigger: GATTGCATTTCCCACAGTGAACCTAAAGATGTTACTGTTCTGTCAGTGGCTGAAGAACAAGATCTCCTCAAACAGGAACGCTTGGTAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000483421.7
ENST00000487638.5
CDS GCA 90 bp ATCATTAACTACAGCAGTTTCTCCTTATCCAAGACCCCTGGTGGATaGCTTGAAACCGTGCTCGTGCTGAACCCTATATATACTATGTTT +
Preference number: 5 (lower is better)
Translates to: IINYSSFSLSKTPGG*LETVLVLNPIYTMF
Trigger: AAACATAGTATATATAGGGTTCAGCACGAGCACGGTTTCAAGGCATCCACCAGGGGTCTTGGATAAGGAGAAACTGCTGTAGTTAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486494.1
CDS CCA 90 bp TCTGGATCTGGATCTGTATCTAGAAATGAAACGATGGCAAATTCTTaGACTTCGACTTCTCGGCCTATACATGTAATGCATTGGGCTTCG +
Preference number: 5 (lower is better)
Translates to: SGSGSVSRNETMANS*TSTSRPIHVMHWAS
Trigger: CGAAGCCCAATGCATTACATGTATAGGCCGAGAAGTCGAAGTCCAAGAATTTGCCATCGTTTCATTTCTAGATACAGATCCAGATCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000464375.5
ENST00000466330.5
ENST00000466975.5
ENST00000475743.1
ENST00000494621.5
CDS-3UTR CAA 90 bp CCAAGAAGGTTTGCGTCTCTCCTTATAACTTTTCCCACCACCCTGACTGATCTCAACTTGCTAAGATACTaGAGGCACTCTCTTTTGTAT +
Preference number: 5 (lower is better)
Translates to: PRRFASLLITFPTTLTDLNLLRY*RHSLLY
Trigger: ATACAAAAGAGAGTGCCTCAAGTATCTTAGCAAGTT...GAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS-3UTR CAA 90 bp CTAGTGAATTCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCAATTTACTGGACCCACTaGGGACAAGGATTCAAGTTT +
Preference number: 5 (lower is better)
Translates to: LVNSFLSPNHLELLSSASIYWTH*GQGFKF
Trigger: AAACTTGAATCCTTGTCCCAAGTGGGTCCAGTAAAT...TGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGAATTCACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS TCA 90 bp GAAGCGGATGCTACAAGAGGAATTTCTTCTTTGACCTCCTCTCCTTaGGTTTCAAGCTCCAAAGTTTCAACAGCAAAGTCAGAATCACAT +
Preference number: 5 (lower is better)
Translates to: EADATRGISSLTSSP*VSSSKVSTAKSESH
Trigger: ATGTGATTCTGACTTTGCTGTTGAAACTTTGGAGCTTGAAACTCAAGGAGAGGAGGTCAAAGAAGAAATTCCTCTTGTAGCATCCGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS TCA 90 bp CTTATGACGTGTACTCTTGCAGTGATTTGTCATTGCTTTTTCACCTaGGTAGAAGAGGGAACAAATTGGACAGAAGAATCCAGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: LMTCTLAVICHCFFT*VEEGTNWTEESSLR
Trigger: CCTAAGGCTGGATTCTTCTGTCCAATTTGTTCCCTCTTCTACTCAGGTGAAAAAGCAATGACAAATCACTGCAAGAGTACACGTCATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000460310.1
ENST00000461991.3
ENST00000472758.5
ENST00000483421.7
ENST00000487638.5
ENST00000488126.2
ENST00000493576.6
CDS GCA 90 bp TGTACGTTAGATGAATTAATCACAGGTTCATGTGGGATCCGCTCTTaGTGGCTTACAGATGAAATTAATTCCGACGAAAAAGGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: CTLDELITGSCGIRS*WLTDEINSDEKGCW
Trigger: CCAGCAACCTTTTTCGTCGGAATTAATTTCATCTGTAAGCCAGCAAGAGCGGATCCCACATGAACCTGTGATTAATTCATCTAACGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS GCA 90 bp TTAGGCTTTTGTGCTGGTGAATGTCCCTTATCAGCAGCTTCAAGATaGTTCTGTTTATTAAATTCTGTCCCATGCCCAGATCGTTGTACT +
Preference number: 5 (lower is better)
Translates to: LGFCAGECPLSAASR*FCLLNSVPCPDRCT
Trigger: AGTACAACGATCTGGGCATGGGACAGAATTTAATAAACAGAAGCATCTTGAAGCTGCTGATAAGGGACATTCACCAGCACAAAAGCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000466330.5
ENST00000494621.5
ENST00000601581.3
CDS GCA 90 bp TCTTCAAGCTCATTAGGTTTAACAGAGGGACTATCAGTTGCTGTTTaGACCTCACTTTCATCAATTGGACTGTTTTTCAAGCCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: SSSSLGLTEGLSVAV*TSLSSIGLFFKPGL
Trigger: AAGCCCTGGCTTGAAAAACAGTCCAATTGATGAAAGTGAGGTGCAAACAGCAACTGATAGTCCCTCTGTTAAACCTAATGAGCTTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS CCA 90 bp GAGAAAAAGGACCGATTATTGGAGGACTCACCGGGGAAGTCCATTTaGCGAAATACGTCTTCAACAGGAAACATAGAATTACATATCACA +
Preference number: 5 (lower is better)
Translates to: EKKDRLLEDSPGKSI*RNTSSTGNIELHIT
Trigger: TGTGATATGTAATTCTATGTTTCCTGTTGAAGACGTATTTCGCCAAATGGACTTCCCCGGTGAGTCCTCCAATAATCGGTCCTTTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CCA 90 bp ACGTTAGATGAATTAATCACAGGTTCATGTGGGATCCGCTCTTGCTaGCTTACAGATGAAATTAATTCCGACGAAAAAGGTTGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: TLDELITGSCGIRSC*LTDEINSDEKGCWF
Trigger: GAACCAGCAACCTTTTTCGTCGGAATTAATTTCATCTGTAAGCCAGCAAGAGCGGATCCCACATGAACCTGTGATTAATTCATCTAACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS-3UTR CAA 90 bp CTAGTGAATTCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATGCAGTGATTTGTCATaGCTTTTTCACCTGAGTAGA +
Preference number: 5 (lower is better)
Translates to: LVNSFLSPNHLELLSSASCSDLS*LFHLSR
Trigger: TCTACTCAGGTGAAAAAGCAATGACAAATCACTGCA...TGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGAATTCACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR CAA 90 bp CTAGTGAATTCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCATACTCTTGCAGTGATTaGTCATTGCTTTTTCACCTG +
Preference number: 5 (lower is better)
Translates to: LVNSFLSPNHLELLSSASYSCSD*SLLFHL
Trigger: CAGGTGAAAAAGCAATGACAAATCACTGCAAGAGTA...TGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGAATTCACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS-3UTR CAA 90 bp CTAGTGAATTCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCACTACTCTGGCAAATGTaGCTCAGTATTTTGCTTATG +
Preference number: 5 (lower is better)
Translates to: LVNSFLSPNHLELLSSASLLWQM*LSILLM
Trigger: CATAAGCAAAATACTGAGCAACATTTGCCAGAGTAG...TGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGAATTCACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS TCA 90 bp TTTCTTCCATATTTAGTTCTTCTTCATCAATTACTTCATCCACAGTaGCTAGAGCTTGTGCTAGATGTGCAGCTGCATCTTCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: FLPYLVLLHQLLHPQ*LELVLDVQLHLPLP
Trigger: GGGAAGAGGAAGATGCAGCTGCACATCTAGCACAAGCTCTAGTCACTGTGGATGAAGTAATTGATGAAGAAGAACTAAATATGGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000483421.7
ENST00000487638.5
CDS TCA 90 bp TGTATTTCATCTACAGTAACTAAAGTAGAAGGGTCTTCGGGCACCTaGGAAGAAATGAAGCCAATGGAATCCCTTACAGTATCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: CISSTVTKVEGSSGT*EEMKPMESLTVSPS
Trigger: TGAAGGAGATACTGTAAGGGATTCCATTGGCTTCATTTCTTCTCAGGTGCCCGAAGACCCTTCTACTTTAGTTACTGTAGATGAAATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000483421.7
ENST00000487638.5
ENST00000493576.6
CDS-3UTR CAA 90 bp CTAGTGAATTCTTTCCTTTCCCCCAATCACCTAGAGCTTCTTTCTTCAGCCTCAATGTTGCTCAGTATTTaGCTTATGACGTGTACTCTT +
Preference number: 5 (lower is better)
Translates to: LVNSFLSPNHLELLSSASMLLSI*LMTCTL
Trigger: AAGAGTACACGTCATAAGCAAAATACTGAGCAACAT...TGAGGCTGAAGAAAGAAGCTCTAGGTGATTGGGGGAAAGGAAAGAATTCACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS TCA 90 bp ACATATCACATTTGGATTGGGAACAGATGCAGAAATGTTCTGCTGTaGCTGAAATTCATTCTCGACCTCATCAGTTGGAATTTCAGGATC +
Preference number: 5 (lower is better)
Translates to: TYHIWIGNRCRNVLL*LKFILDLISWNFRI
Trigger: GATCCTGAAATTCCAACTGATGAGGTCGAGAATGAATTTCAGTCACAGCAGAACATTTCTGCATCTGTTCCCAATCCAAATGTGATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CCA 90 bp GACCTCATCAGTTGGAATTTCAGGATCATAAATACGTACTTCAAGTaGATCTTCTGTGTAGCCATATTTGCTTGCATGCCCATAATCGAT +
Preference number: 5 (lower is better)
Translates to: DLISWNFRIINTYFK*IFCVAIFACMPIID
Trigger: ATCGATTATGGGCATGCAAGCAAATATGGCTACACAGAAGATCCACTTGAAGTACGTATTTATGATCCTGAAATTCCAACTGATGAGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS TCA 90 bp TTACTTGAAACTGCTTCACTACCAAGTGTTTCTTTATTTCTGCTCTaGGAAGGTAAATTAGGTAATCGGCGCCCCATTTTTCGCATTCTT +
Preference number: 5 (lower is better)
Translates to: LLETASLPSVSLFLL*EGKLGNRRPIFRIL
Trigger: AAGAATGCGAAAAATGGGGCGCCGATTACCTAATTTACCTTCTCAGAGCAGAAATAAAGAAACACTTGGTAGTGAAGCAGTTTCAAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS TCA 90 bp TGTGTAGCCATATTTGCTTGCATGCCCATAATCGATCACATTACTTaGAACTGCTTCACTACCAAGTGTTTCTTTATTTCTGCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: CVAIFACMPIIDHIT*NCFTTKCFFISALR
Trigger: TCTCAGAGCAGAAATAAAGAAACACTTGGTAGTGAAGCAGTTTCAAGTAATGTGATCGATTATGGGCATGCAAGCAAATATGGCTACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS GCA 90 bp GATCATAAATACGTACTTCAAGTGGATCTTCTGTGTAGCCATATTTaGTTGCATGCCCATAATCGATCACATTACTTGAAACTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: DHKYVLQVDLLCSHI*LHAHNRSHYLKLLH
Trigger: GTGAAGCAGTTTCAAGTAATGTGATCGATTATGGGCATGCAAGCAAATATGGCTACACAGAAGATCCACTTGAAGTACGTATTTATGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CCA 90 bp AAGAACCCTGCAAGAAACAGCCCTATACTCATCTTTGTATGTCCATaGAATTACTATGGGGGCAAATTCTTAGATATGGACTTGATGTAT +
Preference number: 5 (lower is better)
Translates to: KNPARNSPILIFVCP*NYYGGKFLDMDLMY
Trigger: ATACATCAAGTCCATATCTAAGAATTTGCCCCCATAGTAATTCCATGGACATACAAAGATGAGTATAGGGCTGTTTCTTGCAGGGTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487638.5
CDS TCA 90 bp AAAGCATTTTGGACTACCTCTAAATGGATTTCTAATTCGATATGGTaGACGGGATCTGGATCTGGATCTGTATCTAGAAATGAAACGATG +
Preference number: 5 (lower is better)
Translates to: KAFWTTSKWISNSIW*TGSGSGSVSRNETM
Trigger: CATCGTTTCATTTCTAGATACAGATCCAGATCCAGATCCCGTTCACCATATCGAATTAGAAATCCATTTAGAGGTAGTCCAAAATGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000464375.5
ENST00000466330.5
ENST00000466975.5
ENST00000475743.1
ENST00000494621.5
CDS TCA 90 bp ATAATTTCTGCCCCTTTCTTCTCCAAGTCACTGTTAAACATCTGCTaGTTTAAAGCACACTCCTCGGCATTTTCAGTGAATTGTTCAATA +
Preference number: 5 (lower is better)
Translates to: IISAPFFSKSLLNIC*FKAHSSAFSVNCSI
Trigger: TATTGAACAATTCACTGAAAATGCCGAGGAGTGTGCTTTAAATCAGCAGATGTTTAACAGTGACTTGGAGAAGAAAGGGGCAGAAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS TCA 90 bp ACAGCCAGAATACTAGTTTTACTAGTTTCATCAGGCTTATTAGCCTaGCCCACTCCTTTATTTGGGTATGCCTTGAATAAAGTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: TARILVLLVSSGLLA*PTPLFGYALNKVFS
Trigger: AGAAAACACTTTATTCAAGGCATACCCAAATAAAGGAGTGGGTCAGGCTAATAAGCCTGATGAAACTAGTAAAACTAGTATTCTGGCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS GCA 90 bp AAACTTCTTTCTACCCAGAGGAAGCCAAAATGGATTCAAAGTAGCTaGATTCTGGAGACAATCATGTTACATACAAAGAGTCACTATACA +
Preference number: 5 (lower is better)
Translates to: KLLSTQRKPKWIQSS*ILETIMLHTKSHYT
Trigger: TGTATAGTGACTCTTTGTATGTAACATGATTGTCTCCAGAATGCAGCTACTTTGAATCCATTTTGGCTTCCTCTGGGTAGAAAGAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409407.4
CDS CCA 90 bp TACCTTTTTCTTTCTCAGGGAAAACCTCCCTTTGTTAATCCCATCTaGCCATTCTTTGCACAATATTCTCCAAGATTCTTTAATGTAAGG +
Preference number: 5 (lower is better)
Translates to: YLFLSQGKPPFVNPI*PFFAQYSPRFFNVR
Trigger: CCTTACATTAAAGAATCTTGGAGAATATTGTGCAAAGAATGGCCAGATGGGATTAACAAAGGGAGGTTTTCCCTGAGAAAGAAAAAGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488126.2
CDS TCA 90 bp AGAGACTATAACAGCCTTGATGCTTGGTTTACTGCTAGATACATCTaGTACAGCCAGAATACTAGTTTTACTAGTTTCATCAGGCTTATT +
Preference number: 5 (lower is better)
Translates to: RDYNSLDAWFTARYI*YSQNTSFTSFIRLI
Trigger: AATAAGCCTGATGAAACTAGTAAAACTAGTATTCTGGCTGTATCAGATGTATCTAGCAGTAAACCAAGCATCAAGGCTGTTATAGTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS TCA 90 bp TCACAACAGACAAAGGGAGAAGCAACCCAACTGTCCATCAATGGATaGGTGGATATAAAAATGTGTTACATGCGTAAAACAGAATTATTA +
Preference number: 5 (lower is better)
Translates to: SQQTKGEATQLSING*VDIKMCYMRKTELL
Trigger: TAATAATTCTGTTTTACGCATGTAACACATTTTTATATCCACTCATCCATTGATGGACAGTTGGGTTGCTTCTCCCTTTGTCTGTTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409407.4
CDS GCA 90 bp CAGTTTCTTACTTTAATAATGGAGTGTCATATGAGACTAGTGATCTaGAGAATCTACTCTGGCAAATGTTGCTGTTCAAGGAAAAGGAAT +
Preference number: 5 (lower is better)
Translates to: QFLTLIMECHMRLVI*RIYSGKCCCSRKRN
Trigger: ATTCCTTTTCCTTGAACAGCAACATTTGCCAGAGTAGATTCTGCAGATCACTAGTCTCATATGACACTCCATTATTAAAGTAAGAAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460310.1
CDS GCA 90 bp CTCAGCCAAAGTCTTTCTTTTTCTAATTCTGGGTCATGCTCAATTTaGACCTGTAATATAATCAGCATTTTATTAGAGGCTATTCCACTG +
Preference number: 5 (lower is better)
Translates to: LSQSLSFSNSGSCSI*TCNIISILLEAIPL
Trigger: CAGTGGAATAGCCTCTAATAAAATGCTGATTATATTACAGGTGCAAATTGAGCATGACCCAGAATTAGAAAAAGAAAGACTTTGGCTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483421.7
CDS CCA 90 bp TACTCAGCTTTAAAAATGAAGAAAAATCTGACACATGCTGCAACATaGATGAACCTTAGAGACATTATACTAAGTGACATGAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: YSALKMKKNLTHAAT*MNLRDIILSDMSQS
Trigger: TGACTGGCTCATGTCACTTAGTATAATGTCTCTAAGGTTCATCCATGTTGCAGCATGTGTCAGATTTTTCTTCATTTTTAAAGCTGAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409407.4
CDS CCA 90 bp TTTCTACCCAGAGGAAGCCAAAATGGATTCAAAGTAGCTGCATTCTaGAGACAATCATGTTACATACAAAGAGTCACTATACACAAAAAT +
Preference number: 5 (lower is better)
Translates to: FLPRGSQNGFKVAAF*RQSCYIQRVTIHKN
Trigger: ATTTTTGTGTATAGTGACTCTTTGTATGTAACATGATTGTCTCCAGAATGCAGCTACTTTGAATCCATTTTGGCTTCCTCTGGGTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409407.4
CDS TCA 90 bp AGCTTCCTCATCTTTTATATTCATGTTTTCAGGAGCCATACTTATTaGGAGTTGATTTCCATCCATCAATACTGGGAAGCAGGTATAAAA +
Preference number: 5 (lower is better)
Translates to: SFLIFYIHVFRSHTY*ELISIHQYWEAGIK
Trigger: TTTTATACCTGCTTCCCAGTATTGATGGATGGAAATCAACTCTCAATAAGTATGGCTCCTGAAAACATGAATATAAAAGATGAGGAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000487638.5
ENST00000494241.5
CDS GCA 90 bp TACGTTACACAGAGAACACAAATGTGGAAATATTCTTGGAGATGCTaGATAATAATCATTCATCATAGAAGGAGTTGGAAGTCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: YVTQRTQMWKYSWRC*IIIIHHRRSWKSLH
Trigger: ATGAAGAGACTTCCAACTCCTTCTATGATGAATGATTATTATGCAGCATCTCCAAGAATATTTCCACATTTGTGTTCTCTGTGTAACGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CCA 90 bp ACCTCTGGTAAGTCTATCTTTGGAGATAATGAGCAGGTCAACATATaGTCACCAATATTTTGTGGATTTTGTTTCAGAAAGCTATACATT +
Preference number: 5 (lower is better)
Translates to: TSGKSIFGDNEQVNI*SPIFCGFCFRKLYI
Trigger: AATGTATAGCTTTCTGAAACAAAATCCACAAAATATTGGTGACCATATGTTGACCTGCTCATTATCTCCAAAGATAGACTTACCAGAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
ENST00000494241.5
CDS CCA 90 bp TGTTCTTCAGCCACTGACAGAACAGTAACATCTTTAGGTTCACTGTaGGAAATGCAATCATCTTGGTCAATTAATTCATCTAATGTAAAA +
Preference number: 5 (lower is better)
Translates to: CSSATDRTVTSLGSL*EMQSSWSINSSNVK
Trigger: TTTTACATTAGATGAATTAATTGACCAAGATGATTGCATTTCCCACAGTGAACCTAAAGATGTTACTGTTCTGTCAGTGGCTGAAGAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000483421.7
ENST00000487638.5
CDS CCA 72 bp CCGGCAGTCGCGGAATCCGGGCTCTGCGCGGCAGCCTaGGCTGCCGCCGGGGTGGTATTCCCGGCAGGAACG +
Preference number: 6 (lower is better)
Translates to: PAVAESGLCAAA*AAAGVVFPAGT
Trigger: CGTTCCTGCCGGGAATACCACCCCGGCGGCAGCCCAGGCTGCCGCGCAGAGCCCGGATTCCGCGACTGCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410075.5
ENST00000466330.5
ENST00000466975.5
ENST00000494621.5
CDS GCA 72 bp AGTCGCGGAATCCGGGCTCTGCGCGGCAGCCTGGGCTaGCGCCGGGGTGGTATTCCCGGCAGGAACGCCGTC +
Preference number: 6 (lower is better)
Translates to: SRGIRALRGSLG*RRGGIPGRNAV
Trigger: GACGGCGTTCCTGCCGGGAATACCACCCCGGCGGCAGCCCAGGCTGCCGCGCAGAGCCCGGATTCCGCGACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410075.5
ENST00000466330.5
ENST00000466975.5
ENST00000494621.5
CDS GCA 72 bp ACGGCGCGCGCGGCTCTCTACGCGCCTCACACGCCTTaGACGCCGCCGCTTGAGCCTCAAGGCGCAGGACTC +
Preference number: 6 (lower is better)
Translates to: TARAALYAPHTP*TPPLEPQGAGL
Trigger: GAGTCCTGCGCCTTGAGGCTCAAGCGGCGGCGTGCAAGGCGTGTGAGGCGCGTAGAGAGCCGCGCGCGCCGT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494621.5
CDS GCA 72 bp GTCTCGACGCCGAAAACGCTACCGCCTCCAAAGAGCTaGACGCATGCGCGCCTCCCAGCTCCTGCGAGCCCT +
Preference number: 6 (lower is better)
Translates to: VSTPKTLPPPKS*THARLPAPASP
Trigger: AGGGCTCGCAGGAGCTGGGAGGCGCGCATGCGTGCAGCTCTTTGGAGGCGGTAGCGTTTTCGGCGTCGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437658.2
CDS GCA 72 bp GAATCCAATCCGCTTCAGCGAGTCCAAAACCTGCGGTaGCCCGGCAGTCGCGGAATCCGGGCTCTGCGCGGC +
Preference number: 6 (lower is better)
Translates to: ESNPLQRVQNLR*PGSRGIRALRG
Trigger: GCCGCGCAGAGCCCGGATTCCGCGACTGCCGGGGCACCGCAGGTTTTGGACTCGCTGAAGCGGATTGGATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466330.5
ENST00000494621.5
CDS GCA 72 bp ATCAGGATACCGCTTCAGCGAGTCCAAAACCTGCGGTaGCCCGGCAGTCGCGGAATCCGGGCTCTGCGCGGC +
Preference number: 6 (lower is better)
Translates to: IRIPLQRVQNLR*PGSRGIRALRG
Trigger: GCCGCGCAGAGCCCGGATTCCGCGACTGCCGGGGCACCGCAGGTTTTGGACTCGCTGAAGCGGTATCCTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466975.5
CDS GCA 72 bp ATGCTGAATCCAATCCGCTTCAGCGAGTCCAAAACCTaGGGTGCCCCGGCAGTCGCGGAATCCGGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: MLNPIRFSESKT*GAPAVAESGLC
Trigger: GCAGAGCCCGGATTCCGCGACTGCCGGGGCACCGCAGGTTTTGGACTCGCTGAAGCGGATTGGATTCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466330.5
ENST00000494621.5
CDS GCA 72 bp TTCCAATCAGGATACCGCTTCAGCGAGTCCAAAACCTaGGGTGCCCCGGCAGTCGCGGAATCCGGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: FQSGYRFSESKT*GAPAVAESGLC
Trigger: GCAGAGCCCGGATTCCGCGACTGCCGGGGCACCGCAGGTTTTGGACTCGCTGAAGCGGTATCCTGATTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466975.5
CDS GCA 72 bp AAGAATAACACAAAGCGCTTCAGCGAGTCCAAAACCTaGGGTGCCCCGGCAGTCGCGGAATCCGGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: KNNTKRFSESKT*GAPAVAESGLC
Trigger: GCAGAGCCCGGATTCCGCGACTGCCGGGGCACCGCAGGTTTTGGACTCGCTGAAGCGCTTTGTGTTATTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS CCA 72 bp TGGGAGACCCATAGATCCAGGCCTCATAAATGGTCCTaGAGGCCTCATCCCAGAAGGGTTAGGTGCTCGTGG +
Preference number: 6 (lower is better)
Translates to: WETHRSRPHKWS*RPHPRRVRCSW
Trigger: CCACGAGCACCTAACCCTTCTGGGATGAGGCCTCCAGGACCATTTATGAGGCCTGGATCTATGGGTCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454278.5
ENST00000455226.5
CDS GCA 72 bp AAATGGTCCTGGAGGCCTCATCCCAGAAGGGTTAGGTaGTCGTGGCCTTTGAAGTGGAAAGTCTCCTCGAGG +
Preference number: 6 (lower is better)
Translates to: KWSWRPHPRRVR*SWPLKWKVSSR
Trigger: CCTCGAGGAGACTTTCCACTTCAAAGGCCACGAGCACCTAACCCTTCTGGGATGAGGCCTCCAGGACCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS CAA 90 bp TGGTCCTGGAGGCCTCATCCCAGAAGGGTTAGGTGCTCGTGGCCTTaGAAGTGGAAAGTCTCCTCGAGGATTAAACCTGGGTCTCGACAT +
Preference number: 6 (lower is better)
Translates to: WSWRPHPRRVRCSWP*KWKVSSRIKPGSRH
Trigger: ATGTCGAGACCCAGGTTTAATCCTCGAGGAGACTTTCCACTTCAAAGGCCACGAGCACCTAACCCTTCTGGGATGAGGCCTCCAGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS TCA 72 bp GGCCTCATCCCAGAAGGGTTAGGTGCTCGTGGCCTTTaGAGTGGAAAGTCTCCTCGAGGATTAAACCTGGGT +
Preference number: 6 (lower is better)
Translates to: GLIPEGLGARGL*SGKSPRGLNLG
Trigger: ACCCAGGTTTAATCCTCGAGGAGACTTTCCACTTCAAAGGCCACGAGCACCTAACCCTTCTGGGATGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000417778.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS CCA 72 bp CCTAGCCACGCCATGGTATGGTCTGATGCATCGTACTaGAATCCAAAGAGGGCTGACTGCACAGTCTCTTCG +
Preference number: 6 (lower is better)
Translates to: PSHAMVWSDASY*NPKRADCTVSS
Trigger: CGAAGAGACTGTGCAGTCAGCCCTCTTTGGATTCCAGTACGATGCATCAGACCATACCATGGCGTGGCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS CAA 72 bp AGGCCTCATCCCAGAAGGGTTAGGTGCTCGTGGCCTTaGAAGTGGAAAGTCTCCTCGAGGATTAAACCTGGG +
Preference number: 6 (lower is better)
Translates to: RPHPRRVRCSWP*KWKVSSRIKPG
Trigger: CCCAGGTTTAATCCTCGAGGAGACTTTCCACTTCAAAGGCCACGAGCACCTAACCCTTCTGGGATGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000417778.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS GCA 72 bp GCCAGCAAATCTGTGTGGAATTCCACGTGCTCTCCCTaGTGGGTAAAATCTTGGGAGACCCATAGATCCAGG +
Preference number: 6 (lower is better)
Translates to: ASKSVWNSTCSP*WVKSWETHRSR
Trigger: CCTGGATCTATGGGTCTCCCAAGATTTTACCCAGCAGGGAGAGCACGTGGAATTCCACACAGATTTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454278.5
ENST00000455226.5
CDS CCA 72 bp AAATCTTGGGAGACCCATAGATCCAGGCCTCATAAATaGTCCTGGAGGCCTCATCCCAGAAGGGTTAGGTGC +
Preference number: 6 (lower is better)
Translates to: KSWETHRSRPHK*SWRPHPRRVRC
Trigger: GCACCTAACCCTTCTGGGATGAGGCCTCCAGGACCATTTATGAGGCCTGGATCTATGGGTCTCCCAAGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454278.5
ENST00000455226.5
CDS CCA 72 bp TGGAATTCCACGTGCTCTCCCTGCTGGGTAAAATCTTaGGAGACCCATAGATCCAGGCCTCATAAATGGTCC +
Preference number: 6 (lower is better)
Translates to: WNSTCSPCWVKS*ETHRSRPHKWS
Trigger: GGACCATTTATGAGGCCTGGATCTATGGGTCTCCCAAGATTTTACCCAGCAGGGAGAGCACGTGGAATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454278.5
ENST00000455226.5
CDS CCA 72 bp AGCAAATCTGTGTGGAATTCCACGTGCTCTCCCTGCTaGGTAAAATCTTGGGAGACCCATAGATCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: SKSVWNSTCSPC*VKSWETHRSRP
Trigger: AGGCCTGGATCTATGGGTCTCCCAAGATTTTACCCAGCAGGGAGAGCACGTGGAATTCCACACAGATTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454278.5
ENST00000455226.5
CDS CCA 72 bp CCTGCAGGATCATTTCCTTCACTTCTGGTACTGTGTTaGGTCCTAGCCACGCCATGGTATGGTCTGATGCAT +
Preference number: 6 (lower is better)
Translates to: PAGSFPSLLVLC*VLATPWYGLMH
Trigger: ATGCATCAGACCATACCATGGCGTGGCTAGGACCCAACACAGTACCAGAAGTGAAGGAAATGATCCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS CAA 72 bp TCCTGCAGGATCATTTCCTTCACTTCTGGTACTGTGTaGGGTCCTAGCCACGCCATGGTATGGTCTGATGCA +
Preference number: 6 (lower is better)
Translates to: SCRIISFTSGTV*GPSHAMVWSDA
Trigger: TGCATCAGACCATACCATGGCGTGGCTAGGACCCAACACAGTACCAGAAGTGAAGGAAATGATCCTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS TCA 72 bp TCTGTAATCCAGTTTAGAAAGCTTGCCTTGCAGGGCTaGGATCCTTCCACTGCCTCCTCTGGTAAGACTGCT +
Preference number: 6 (lower is better)
Translates to: SVIQFRKLALQG*DPSTASSGKTA
Trigger: AGCAGTCTTACCAGAGGAGGCAGTGGAAGGATCTCAGCCCTGCAAGGCAAGCTTTCTAAACTGGATTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS GCA 72 bp GCAAAGGAGATGGGCCCAACAGAAGTGGGTTTGCAATaGCCAGGTTCAAGGAATTCACAAGTGGTGCGAAAT +
Preference number: 6 (lower is better)
Translates to: AKEMGPTEVGLQ*PGSRNSQVVRN
Trigger: ATTTCGCACCACTTGTGAATTCCTTGAACCTGGGCATTGCAAACCCACTTCTGTTGGGCCCATCTCCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000417778.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS GCA 72 bp AAAGTGCAAAGGAGATGGGCCCAACAGAAGTGGGTTTaGAATGCCCAGGTTCAAGGAATTCACAAGTGGTGC +
Preference number: 6 (lower is better)
Translates to: KVQRRWAQQKWV*NAQVQGIHKWC
Trigger: GCACCACTTGTGAATTCCTTGAACCTGGGCATTGCAAACCCACTTCTGTTGGGCCCATCTCCTTTGCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000417778.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS GCA 72 bp AGATTCATGGCCAGCAAATCTGTGTGGAATTCCACGTaGTCTCCCTGCTGGGTAAAATCTTGGGAGACCCAT +
Preference number: 6 (lower is better)
Translates to: RFMASKSVWNST*SPCWVKSWETH
Trigger: ATGGGTCTCCCAAGATTTTACCCAGCAGGGAGAGCACGTGGAATTCCACACAGATTTGCTGGCCATGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
ENST00000454278.5
ENST00000455226.5
CDS CCA 72 bp CTGAGCAAAGTGCAAAGGAGATGGGCCCAACAGAAGTaGGTTTGCAATGCCCAGGTTCAAGGAATTCACAAG +
Preference number: 6 (lower is better)
Translates to: LSKVQRRWAQQK*VCNAQVQGIHK
Trigger: CTTGTGAATTCCTTGAACCTGGGCATTGCAAACCCACTTCTGTTGGGCCCATCTCCTTTGCACTTTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000417778.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS CAA 72 bp CAAAGTGCAAAGGAGATGGGCCCAACAGAAGTGGGTTaGCAATGCCCAGGTTCAAGGAATTCACAAGTGGTG +
Preference number: 6 (lower is better)
Translates to: QSAKEMGPTEVG*QCPGSRNSQVV
Trigger: CACCACTTGTGAATTCCTTGAACCTGGGCATTGCAAACCCACTTCTGTTGGGCCCATCTCCTTTGCACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000417778.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS CAA 72 bp TTGGACTTCGACTTCTCGGCCTATACATGTAATGCATaGGGCTTCGAGACCGACGGAATCTGTGACTTGAGC +
Preference number: 6 (lower is better)
Translates to: LDFDFSAYTCNA*GFETDGICDLS
Trigger: GCTCAAGTCACAGATTCCGTCGGTCTCGAAGCCCAATGCATTACATGTATAGGCCGAGAAGTCGAAGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000464375.5
ENST00000466330.5
ENST00000466975.5
ENST00000475743.1
ENST00000494621.5
CDS TCA 72 bp CCAAGTCTGACCTGCAGACTCAGGCTGAGCGACGGATaGAAAAAGTACACAGACACAGGTATTTTGCATGAG +
Preference number: 6 (lower is better)
Translates to: PSLTCRLRLSDG*KKYTDTGILHE
Trigger: CTCATGCAAAATACCTGTGTCTGTGTACTTTTTTCATCCGTCGCTCAGCCTGAGTCTGCAGGTCAGACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487638.5
CDS CCA 72 bp CAACTGAGTCTTAATCTGAGCAAAGTGCAAAGGAGATaGGCCCAACAGAAGTGGGTTTGCAATGCCCAGGTT +
Preference number: 6 (lower is better)
Translates to: QLSLNLSKVQRR*AQQKWVCNAQV
Trigger: AACCTGGGCATTGCAAACCCACTTCTGTTGGGCCCATCTCCTTTGCACTTTGCTCAGATTAAGACTCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000417778.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS CCA 72 bp ATCGGGACTCCTTTAAACTACTACAATTTCTGGTCCTaGCCCCAAACTTCGCCTATGCCTACCCGACTAACA +
Preference number: 6 (lower is better)
Translates to: IGTPLNYYNFWS*PQTSPMPTRLT
Trigger: TGTTAGTCGGGTAGGCATAGGCGAAGTTTGGGGCCAGGACCAGAAATTGTAGTAGTTTAAAGGAGTCCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417778.5
CDS CAA 90 bp CCTGACATCTTGGTTCCACTCTCAACTGAGAAAAAGGACCGATTATaGGAGGACTCACCGGGGAAGTCCATTTGGCGAAATACGTCTTCA +
Preference number: 6 (lower is better)
Translates to: PDILVPLSTEKKDRL*EDSPGKSIWRNTSS
Trigger: TGAAGACGTATTTCGCCAAATGGACTTCCCCGGTGAGTCCTCCAATAATCGGTCCTTTTTCTCAGTTGAGAGTGGAACCAAGATGTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CAA 90 bp GGCAAATTCTTGGACTTCGACTTCTCGGCCTATACATGTAATGCATaGGGCTTCGAGACCGACGGAATCTGTGACTTGAGCTTGATCTTC +
Preference number: 6 (lower is better)
Translates to: GKFLDFDFSAYTCNA*GFETDGICDLSLIF
Trigger: GAAGATCAAGCTCAAGTCACAGATTCCGTCGGTCTCGAAGCCCAATGCATTACATGTATAGGCCGAGAAGTCGAAGTCCAAGAATTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000464375.5
ENST00000466330.5
ENST00000466975.5
ENST00000475743.1
ENST00000494621.5
CDS CAA 90 bp GGTTCAAGGACTGACTGTCCTCCTGAAATGTGTAAGCCTGACATCTaGGTTCCACTCTCAACTGAGAAAAAGGACCGATTATTGGAGGAC +
Preference number: 6 (lower is better)
Translates to: GSRTDCPPEMCKPDI*VPLSTEKKDRLLED
Trigger: GTCCTCCAATAATCGGTCCTTTTTCTCAGTTGAGAGTGGAACCAAGATGTCAGGCTTACACATTTCAGGAGGACAGTCAGTCCTTGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CAA 90 bp GGTACAAGAAAGTCTAATTCCTCAGGGACATCAGACGCCACTGATTaGCCTGAAGAAGAGTCTTCAGTCTTCTTGCGTTTTCGCTCTGGT +
Preference number: 6 (lower is better)
Translates to: GTRKSNSSGTSDATD*PEEESSVFLRFRSG
Trigger: ACCAGAGCGAAAACGCAAGAAGACTGAAGACTCTTCTTCAGGCAAATCAGTGGCGTCTGATGTCCCTGAGGAATTAGACTTTCTTGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000460310.1
ENST00000461991.3
ENST00000472758.5
ENST00000483421.7
ENST00000487638.5
ENST00000488126.2
ENST00000493576.6
CDS TCA 72 bp TGTAACCTGTGTTACAGAACTCTGTTTCACTGCCACTaGTGCAGATATATGAGGCTCATCATCCCACCGGCT +
Preference number: 6 (lower is better)
Translates to: CNLCYRTLFHCH*CRYMRLIIPPA
Trigger: AGCCGGTGGGATGATGAGCCTCATATATCTGCATCAGTGGCAGTGAAACAGAGTTCTGTAACACAGGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000437658.2
CDS TCA 72 bp CAGTTTCTCCTTATCCAAGACCCCTGGTGGATGCCTTaGAACCGTGCTCGTGCTGAACCCTATATATACTAT +
Preference number: 6 (lower is better)
Translates to: QFLLIQDPWWMP*NRARAEPYIYY
Trigger: ATAGTATATATAGGGTTCAGCACGAGCACGGTTTCAAGGCATCCACCAGGGGTCTTGGATAAGGAGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486494.1
CDS CCA 72 bp TGGTTCCACTCTCAACTGAGAAAAAGGACCGATTATTaGAGGACTCACCGGGGAAGTCCATTTGGCGAAATA +
Preference number: 6 (lower is better)
Translates to: WFHSQLRKRTDY*RTHRGSPFGEI
Trigger: TATTTCGCCAAATGGACTTCCCCGGTGAGTCCTCCAATAATCGGTCCTTTTTCTCAGTTGAGAGTGGAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CCA 72 bp TTTTTCATCGGGACTCCTTTAAACTACTACAATTTCTaGTCCTGGCCCCAAACTTCGCCTATGCCTACCCGA +
Preference number: 6 (lower is better)
Translates to: FFIGTPLNYYNF*SWPQTSPMPTR
Trigger: TCGGGTAGGCATAGGCGAAGTTTGGGGCCAGGACCAGAAATTGTAGTAGTTTAAAGGAGTCCCGATGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417778.5
CDS CAA 72 bp TTGGTTCCACTCTCAACTGAGAAAAAGGACCGATTATaGGAGGACTCACCGGGGAAGTCCATTTGGCGAAAT +
Preference number: 6 (lower is better)
Translates to: LVPLSTEKKDRL*EDSPGKSIWRN
Trigger: ATTTCGCCAAATGGACTTCCCCGGTGAGTCCTCCAATAATCGGTCCTTTTTCTCAGTTGAGAGTGGAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CAA 72 bp TTGTCAGGCGTAGCGATTACTGCTCGTATTCCGGCTTaGCATCACCAGAGAGCAGAGCAAGGAACAAATTAT +
Preference number: 6 (lower is better)
Translates to: LSGVAITARIPA*HHQRAEQGTNY
Trigger: ATAATTTGTTCCTTGCTCTGCTCTCTGGTGATGCAAAGCCGGAATACGAGCAGTAATCGCTACGCCTGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS TCA 72 bp GCGTTCCTGTTTGAGGAGATCTTGTTCTTCAGCCACTaGCAGAACAGTAACATCTTTAGGTTCACTGTGGGA +
Preference number: 6 (lower is better)
Translates to: AFLFEEILFFSH*QNSNIFRFTVG
Trigger: TCCCACAGTGAACCTAAAGATGTTACTGTTCTGTCAGTGGCTGAAGAACAAGATCTCCTCAAACAGGAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000483421.7
ENST00000487638.5
CDS TCA 72 bp CTCCAATTTCATCCACAGTTACCAAGCGTTCCTGTTTaGGGAGATCTTGTTCTTCAGCCACTGACAGAACAG +
Preference number: 6 (lower is better)
Translates to: LQFHPQLPSVPV*GDLVLQPLTEQ
Trigger: CTGTTCTGTCAGTGGCTGAAGAACAAGATCTCCTCAAACAGGAACGCTTGGTAACTGTGGATGAAATTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000483421.7
ENST00000487638.5
ENST00000493576.6
CDS CCA 72 bp TGCATCACCAGAGAGCAGAGCAAGGAACAAATTATCTaGAGTGAATGGTTTCTGTGTCTGGAGCAGGATTTG +
Preference number: 6 (lower is better)
Translates to: CITREQSKEQII*SEWFLCLEQDL
Trigger: CAAATCCTGCTCCAGACACAGAAACCATTCACTCCAGATAATTTGTTCCTTGCTCTGCTCTCTGGTGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410075.5
CDS CAA 72 bp GGACCGATTATTGGAGGACTCACCGGGGAAGTCCATTaGGCGAAATACGTCTTCAACAGGAAACATAGAATT +
Preference number: 6 (lower is better)
Translates to: GPIIGGLTGEVH*AKYVFNRKHRI
Trigger: AATTCTATGTTTCCTGTTGAAGACGTATTTCGCCAAATGGACTTCCCCGGTGAGTCCTCCAATAATCGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CAA 72 bp GTCTCTTCATCTTCTGGGCATCAGCATGTGAAAACTTaGGTAGCCAGGATGCTTTCACAATACCAAAGGGAG +
Preference number: 6 (lower is better)
Translates to: VSSSSGHQHVKT*VARMLSQYQRE
Trigger: CTCCCTTTGGTATTGTGAAAGCATCCTGGCTACCAAAGTTTTCACATGCTGATGCCCAGAAGATGAAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS GCA 72 bp CCACTGATTTGCCTGAAGAAGAGTCTTCAGTCTTCTTaGGTTTTCGCTCTGGTTCTGAATCCTTTAATCCAG +
Preference number: 6 (lower is better)
Translates to: PLICLKKSLQSS*VFALVLNPLIQ
Trigger: CTGGATTAAAGGATTCAGAACCAGAGCGAAAACGCAAGAAGACTGAAGACTCTTCTTCAGGCAAATCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000460310.1
ENST00000461991.3
ENST00000472758.5
ENST00000483421.7
ENST00000487638.5
ENST00000488126.2
ENST00000493576.6
CDS CCA 72 bp CTGACTGTCCTCCTGAAATGTGTAAGCCTGACATCTTaGTTCCACTCTCAACTGAGAAAAAGGACCGATTAT +
Preference number: 6 (lower is better)
Translates to: LTVLLKCVSLTS*FHSQLRKRTDY
Trigger: ATAATCGGTCCTTTTTCTCAGTTGAGAGTGGAACCAAGATGTCAGGCTTACACATTTCAGGAGGACAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CAA 72 bp ACTGACTGTCCTCCTGAAATGTGTAAGCCTGACATCTaGGTTCCACTCTCAACTGAGAAAAAGGACCGATTA +
Preference number: 6 (lower is better)
Translates to: TDCPPEMCKPDI*VPLSTEKKDRL
Trigger: TAATCGGTCCTTTTTCTCAGTTGAGAGTGGAACCAAGATGTCAGGCTTACACATTTCAGGAGGACAGTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CAA 72 bp TCTCCAATTTCATCCACAGTTACCAAGCGTTCCTGTTaGAGGAGATCTTGTTCTTCAGCCACTGACAGAACA +
Preference number: 6 (lower is better)
Translates to: SPISSTVTKRSC*RRSCSSATDRT
Trigger: TGTTCTGTCAGTGGCTGAAGAACAAGATCTCCTCAAACAGGAACGCTTGGTAACTGTGGATGAAATTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000483421.7
ENST00000487638.5
ENST00000493576.6
CDS CAA 72 bp GCCACTGATTTGCCTGAAGAAGAGTCTTCAGTCTTCTaGCGTTTTCGCTCTGGTTCTGAATCCTTTAATCCA +
Preference number: 6 (lower is better)
Translates to: ATDLPEEESSVF*RFRSGSESFNP
Trigger: TGGATTAAAGGATTCAGAACCAGAGCGAAAACGCAAGAAGACTGAAGACTCTTCTTCAGGCAAATCAGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000460310.1
ENST00000461991.3
ENST00000472758.5
ENST00000483421.7
ENST00000487638.5
ENST00000488126.2
ENST00000493576.6
CDS CAA 72 bp AAGTCTAATTCCTCAGGGACATCAGACGCCACTGATTaGCCTGAAGAAGAGTCTTCAGTCTTCTTGCGTTTT +
Preference number: 6 (lower is better)
Translates to: KSNSSGTSDATD*PEEESSVFLRF
Trigger: AAAACGCAAGAAGACTGAAGACTCTTCTTCAGGCAAATCAGTGGCGTCTGATGTCCCTGAGGAATTAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000460310.1
ENST00000461991.3
ENST00000472758.5
ENST00000483421.7
ENST00000487638.5
ENST00000488126.2
ENST00000493576.6
CDS CAA 90 bp TCTTCCACTTCTCCAATTTCATCCACAGTTACCAAGCGTTCCTGTTaGAGGAGATCTTGTTCTTCAGCCACTGACAGAACAGTAACATCT +
Preference number: 6 (lower is better)
Translates to: SSTSPISSTVTKRSC*RRSCSSATDRTVTS
Trigger: AGATGTTACTGTTCTGTCAGTGGCTGAAGAACAAGATCTCCTCAAACAGGAACGCTTGGTAACTGTGGATGAAATTGGAGAAGTGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000483421.7
ENST00000487638.5
ENST00000493576.6
CDS TCA 72 bp GCCCCTTTCTTCTCCAAGTCACTGTTAAACATCTGCTaGTTTAAAGCACACTCCTCGGCATTTTCAGTGAAT +
Preference number: 6 (lower is better)
Translates to: APFFSKSLLNIC*FKAHSSAFSVN
Trigger: ATTCACTGAAAATGCCGAGGAGTGTGCTTTAAATCAGCAGATGTTTAACAGTGACTTGGAGAAGAAAGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS GCA 72 bp TGTGCTGGTGAATGTCCCTTATCAGCAGCTTCAAGATaGTTCTGTTTATTAAATTCTGTCCCATGCCCAGAT +
Preference number: 6 (lower is better)
Translates to: CAGECPLSAASR*FCLLNSVPCPD
Trigger: ATCTGGGCATGGGACAGAATTTAATAAACAGAAGCATCTTGAAGCTGCTGATAAGGGACATTCACCAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000464375.5
ENST00000466330.5
ENST00000494621.5
ENST00000601581.3
CDS CCA 72 bp GATCTGGATCTGGATCTGTATCTAGAAATGAAACGATaGCAAATTCTTGGACTTCGACTTCTCGGCCTATAC +
Preference number: 6 (lower is better)
Translates to: DLDLDLYLEMKR*QILGLRLLGLY
Trigger: GTATAGGCCGAGAAGTCGAAGTCCAAGAATTTGCCATCGTTTCATTTCTAGATACAGATCCAGATCCAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000464375.5
ENST00000466330.5
ENST00000466975.5
ENST00000475743.1
ENST00000494621.5
CDS CCA 72 bp AGAGCTCGTTGGAAAAAGTACTTGAACATAAATCGCTaGATCCTGGTGACAAGTTTTTCATCGGGACTCCTT +
Preference number: 6 (lower is better)
Translates to: RARWKKYLNINR*ILVTSFSSGLL
Trigger: AAGGAGTCCCGATGAAAAACTTGTCACCAGGATCCAGCGATTTATGTTCAAGTACTTTTTCCAACGAGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417778.5
CDS CAA 72 bp CTCATTGTCTGGCTAACTGTTTGGTTAATGGATTGGTaGACGGATTTTATGGGTTCAAGGACTGACTGTCCT +
Preference number: 6 (lower is better)
Translates to: LIVWLTVWLMDW*TDFMGSRTDCP
Trigger: AGGACAGTCAGTCCTTGAACCCATAAAATCCGTCAACCAATCCATTAACCAAACAGTTAGCCAGACAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CAA 72 bp GGTCATGCTCAATTTGCACCTCTGGTAAGTCTATCTTaGGAGATAATGAGCAGGTCAACATATGGTCACCAA +
Preference number: 6 (lower is better)
Translates to: GHAQFAPLVSLS*EIMSRSTYGHQ
Trigger: TTGGTGACCATATGTTGACCTGCTCATTATCTCCAAAGATAGACTTACCAGAGGTGCAAATTGAGCATGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000487638.5
ENST00000494241.5
CDS CAA 72 bp CTCACAAGGCTCTTCCTGCTGTACCAAAGTTTCTGTTaGAATGCTGGGAGTACTTTCTTCTTCAAGCTCATT +
Preference number: 6 (lower is better)
Translates to: LTRLFLLYQSFC*NAGSTFFFKLI
Trigger: AATGAGCTTGAAGAAGAAAGTACTCCCAGCATTCAAACAGAAACTTTGGTACAGCAGGAAGAGCCTTGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS CAA 72 bp GCTCCAAAGTTTCAACAGCAAAGTCAGAATCACATGTaGCTTTTTCAGCTTCTTCCTCACAAGGCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: APKFQQQSQNHM*LFQLLPHKALP
Trigger: AGGAAGAGCCTTGTGAGGAAGAAGCTGAAAAAGCAACATGTGATTCTGACTTTGCTGTTGAAACTTTGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS CAA 72 bp GGAAACATTTTTCCCCTTCTCTTTGGCATATCCAAATaGCCAGCATCACCATACTTGCACTTTAGGGCCATT +
Preference number: 6 (lower is better)
Translates to: GNIFPLLFGISK*PASPYLHFRAI
Trigger: AATGGCCCTAAAGTGCAAGTATGGTGATGCTGGCAATTTGGATATGCCAAAGAGAAGGGGAAAAATGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486494.1
CDS CAA 90 bp TTCTTCAAGCTCATTAGGTTTAACAGAGGGACTATCAGTTGCTGTTaGCACCTCACTTTCATCAATTGGACTGTTTTTCAAGCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: FFKLIRFNRGTISCC*HLTFINWTVFQARA
Trigger: AGCCCTGGCTTGAAAAACAGTCCAATTGATGAAAGTGAGGTGCAAACAGCAACTGATAGTCCCTCTGTTAAACCTAATGAGCTTGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS TCA 72 bp GGATTGGGAACAGATGCAGAAATGTTCTGCTGTGACTaGAATTCATTCTCGACCTCATCAGTTGGAATTTCA +
Preference number: 6 (lower is better)
Translates to: GLGTDAEMFCCD*NSFSTSSVGIS
Trigger: TGAAATTCCAACTGATGAGGTCGAGAATGAATTTCAGTCACAGCAGAACATTTCTGCATCTGTTCCCAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS TCA 72 bp CTCCTCGGCATTTTCAGTGAATTGTTCAATACTGACTaGAGCGGATGCTACAAGAGGAATTTCTTCTTTGAC +
Preference number: 6 (lower is better)
Translates to: LLGIFSELFNTD*SGCYKRNFFFD
Trigger: GTCAAAGAAGAAATTCCTCTTGTAGCATCCGCTTCAGTCAGTATTGAACAATTCACTGAAAATGCCGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS TCA 72 bp AGTTTGAGGAGACAAAAGTTCACAAATGGATGGTGGTaGTGGTTGCACAATGTGAAGGTGCTGAATATCAGT +
Preference number: 6 (lower is better)
Translates to: SLRRQKFTNGWW*WLHNVKVLNIS
Trigger: ACTGATATTCAGCACCTTCACATTGTGCAACCATCACCACCATCCATTTGTGAACTTTTGTCTCCTCAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409407.4
CDS GCA 72 bp TTCAAGCCAGGGCTTTCTTTTTCTAATTCTGGGTCATaGTCAATTTGCACCTCTGGTAAGTCTATCTTTGGA +
Preference number: 6 (lower is better)
Translates to: FKPGLSFSNSGS*SICTSGKSIFG
Trigger: TCCAAAGATAGACTTACCAGAGGTGCAAATTGAGCATGACCCAGAATTAGAAAAAGAAAGCCCTGGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000487638.5
CDS GCA 72 bp TTCAAGCCAGGGCTTTCTTTTTCTAATTCTGGGTCATaGTCAATTTGCACCTCTGATATCAGCATACAATGG +
Preference number: 6 (lower is better)
Translates to: FKPGLSFSNSGS*SICTSDISIQW
Trigger: CCATTGTATGCTGATATCAGAGGTGCAAATTGAGCATGACCCAGAATTAGAAAAAGAAAGCCCTGGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409407.4
CDS CCA 72 bp GAATTAATCACAGGTTCATGTGGGATCCGCTCTTGCTaGCTTACAGATGAAATTAATTCCGACGAAAAAGGT +
Preference number: 6 (lower is better)
Translates to: ELITGSCGIRSC*LTDEINSDEKG
Trigger: ACCTTTTTCGTCGGAATTAATTTCATCTGTAAGCCAGCAAGAGCGGATCCCACATGAACCTGTGATTAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CCA 72 bp AGAAAACTTCAGTTTGAGGAGACAAAAGTTCACAAATaGATGGTGGTGATGGTTGCACAATGTGAAGGTGCT +
Preference number: 6 (lower is better)
Translates to: RKLQFEETKVHK*MVVMVAQCEGA
Trigger: AGCACCTTCACATTGTGCAACCATCACCACCATCCATTTGTGAACTTTTGTCTCCTCAAACTGAAGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409407.4
CDS CAA 72 bp TCAAGAAAGCCTGATTTAATAAAGTATAAGGTGGTGTaGAACCATGTGAGGCAACGGCATTCAGCTGCTGAA +
Preference number: 6 (lower is better)
Translates to: SRKPDLIKYKVV*NHVRQRHSAAE
Trigger: TTCAGCAGCTGAATGCCGTTGCCTCACATGGTTCAACACCACCTTATACTTTATTAAATCAGGCTTTCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000417778.5
ENST00000437658.2
ENST00000454122.1
ENST00000454278.5
ENST00000455226.5
CDS CAA 72 bp ACTTCTACCAGTAGTGCTTTTAGGATTCTTAGTGTTTaGCTCAGCCAAAGTCTTATTGTTGCTGTCATCCCG +
Preference number: 6 (lower is better)
Translates to: TSTSSAFRILSV*LSQSLIVAVIP
Trigger: CGGGATGACAGCAACAATAAGACTTTGGCTGAGCAAAACACTAAGAATCCTAAAAGCACTACTGGTAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS CAA 72 bp GAGACTAGTGATCTGCAGAATCTACTCTGGCAAATGTaGCTCAGTATTTTGCTTATGACGTGTACTCTTGCA +
Preference number: 6 (lower is better)
Translates to: ETSDLQNLLWQM*LSILLMTCTLA
Trigger: TGCAAGAGTACACGTCATAAGCAAAATACTGAGCAACATTTGCCAGAGTAGATTCTGCAGATCACTAGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS CAA 72 bp GAAAGAACCCTGCAAGAAACAGCCCTATACTCATCTTaGTATGTCCATGGAATTACTATGGGGGCAAATTCT +
Preference number: 6 (lower is better)
Translates to: ERTLQETALYSS*YVHGITMGANS
Trigger: AGAATTTGCCCCCATAGTAATTCCATGGACATACAAAGATGAGTATAGGGCTGTTTCTTGCAGGGTTCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487638.5
CDS CAA 90 bp CTGTGTAGCCATATTTGCTTGCATGCCCATAATCGATCACATTACTaGAAACTGCTTCACTACCAAGTGTTTCTTTATTTCTGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: LCSHICLHAHNRSHY*KLLHYQVFLYFCSE
Trigger: CTCAGAGCAGAAATAAAGAAACACTTGGTAGTGAAGCAGTTTCAAGTAATGTGATCGATTATGGGCATGCAAGCAAATATGGCTACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CAA 90 bp GCTCAGTATTTTGCTTATGACGTGTACTCTTGCAGTGATTTGTCATaGCTTTTTCACCTGAGTAGAAGAGGGAACAAATTGGACAGAAGA +
Preference number: 6 (lower is better)
Translates to: AQYFAYDVYSCSDLS*LFHLSRRGNKLDRR
Trigger: TCTTCTGTCCAATTTGTTCCCTCTTCTACTCAGGTGAAAAAGCAATGACAAATCACTGCAAGAGTACACGTCATAAGCAAAATACTGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS CAA 90 bp CCTCAGTATTTTGCTTATGACGTGTACTCTTGCAGTGATTTGTCATaGCTTTTTCACCTGAGTAGAAGAGGGAACAAATTGGACAGAAGA +
Preference number: 6 (lower is better)
Translates to: PQYFAYDVYSCSDLS*LFHLSRRGNKLDRR
Trigger: TCTTCTGTCCAATTTGTTCCCTCTTCTACTCAGGTGAAAAAGCAATGACAAATCACTGCAAGAGTACACGTCATAAGCAAAATACTGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460310.1
CDS TCA 72 bp ACTGCTTCACTACCAAGTGTTTCTTTATTTCTGCTCTaGGAAGGTAAATTAGGTAATCGGCGCCCCATTTTT +
Preference number: 6 (lower is better)
Translates to: TASLPSVSLFLL*EGKLGNRRPIF
Trigger: AAAAATGGGGCGCCGATTACCTAATTTACCTTCTCAGAGCAGAAATAAAGAAACACTTGGTAGTGAAGCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS GCA 72 bp GATGAATTAATCACAGGTTCATGTGGGATCCGCTCTTaGTGGCTTACAGATGAAATTAATTCCGACGAAAAA +
Preference number: 6 (lower is better)
Translates to: DELITGSCGIRS*WLTDEINSDEK
Trigger: TTTTTCGTCGGAATTAATTTCATCTGTAAGCCAGCAAGAGCGGATCCCACATGAACCTGTGATTAATTCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS GCA 72 bp TCTACCCAGAGGAAGCCAAAATGGATTCAAAGTAGCTaGATTCTGGAGACAATCATGTTACATACAAAGAGT +
Preference number: 6 (lower is better)
Translates to: STQRKPKWIQSS*ILETIMLHTKS
Trigger: ACTCTTTGTATGTAACATGATTGTCTCCAGAATGCAGCTACTTTGAATCCATTTTGGCTTCCTCTGGGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409407.4
CDS GCA 72 bp CTCAGCCAAAGTCTTTCTTTTTCTAATTCTGGGTCATaGTCAATTTGCACCTCTGGTAAGTCTATCTTTGGA +
Preference number: 6 (lower is better)
Translates to: LSQSLSFSNSGS*SICTSGKSIFG
Trigger: TCCAAAGATAGACTTACCAGAGGTGCAAATTGAGCATGACCCAGAATTAGAAAAAGAAAGACTTTGGCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494241.5
CDS CCA 72 bp AGTTGGAATTTCAGGATCATAAATACGTACTTCAAGTaGATCTTCTGTGTAGCCATATTTGCTTGCATGCCC +
Preference number: 6 (lower is better)
Translates to: SWNFRIINTYFK*IFCVAIFACMP
Trigger: GGGCATGCAAGCAAATATGGCTACACAGAAGATCCACTTGAAGTACGTATTTATGATCCTGAAATTCCAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CCA 72 bp GGATCTGTATCTAGAAATGAAACGATGGCAAATTCTTaGACTTCGACTTCTCGGCCTATACATGTAATGCAT +
Preference number: 6 (lower is better)
Translates to: GSVSRNETMANS*TSTSRPIHVMH
Trigger: ATGCATTACATGTATAGGCCGAGAAGTCGAAGTCCAAGAATTTGCCATCGTTTCATTTCTAGATACAGATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000464375.5
ENST00000466330.5
ENST00000466975.5
ENST00000475743.1
ENST00000494621.5
CDS CCA 72 bp AAATATTCTTTTTGTCCACTGTCTTCTCATCCCCAGTaGGAATTCCTGGTACTAACGTCACAATACAAGTTG +
Preference number: 6 (lower is better)
Translates to: KYSFCPLSSHPQ*EFLVLTSQYKL
Trigger: CAACTTGTATTGTGACGTTAGTACCAGGAATTCCCACTGGGGATGAGAAGACAGTGGACAAAAAGAATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS CAA 72 bp GTACTTCAAGTGGATCTTCTGTGTAGCCATATTTGCTaGCATGCCCATAATCGATCACATTACTTGAAACTG +
Preference number: 6 (lower is better)
Translates to: VLQVDLLCSHIC*HAHNRSHYLKL
Trigger: CAGTTTCAAGTAATGTGATCGATTATGGGCATGCAAGCAAATATGGCTACACAGAAGATCCACTTGAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CAA 72 bp AGGAATCAGAGATTGACTCATTGTCTGGCTAACTGTTaGGTTAATGGATTGGTTGACGGATTTTATGGGTTC +
Preference number: 6 (lower is better)
Translates to: RNQRLTHCLANC*VNGLVDGFYGF
Trigger: GAACCCATAAAATCCGTCAACCAATCCATTAACCAAACAGTTAGCCAGACAATGAGTCAATCTCTGATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CAA 72 bp CTGCAGAATCTACTCTGGCAAATGTTGCTCAGTATTTaGCTTATGACGTGTACTCTTGCAGTGATTTGTCAT +
Preference number: 6 (lower is better)
Translates to: LQNLLWQMLLSI*LMTCTLAVICH
Trigger: ATGACAAATCACTGCAAGAGTACACGTCATAAGCAAAATACTGAGCAACATTTGCCAGAGTAGATTCTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS CAA 90 bp CATAAATACGTACTTCAAGTGGATCTTCTGTGTAGCCATATTTGCTaGCATGCCCATAATCGATCACATTACTTGAAACTGCTTCACTAC +
Preference number: 6 (lower is better)
Translates to: HKYVLQVDLLCSHIC*HAHNRSHYLKLLHY
Trigger: GTAGTGAAGCAGTTTCAAGTAATGTGATCGATTATGGGCATGCAAGCAAATATGGCTACACAGAAGATCCACTTGAAGTACGTATTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CAA 90 bp TCTCAGTATTTTGCTTATGACGTGTACTCTTGCAGTGATTTGTCATaGCTTTTTCACCTGAGTAGAAGAGGGAACAAATTGGACAGAAGA +
Preference number: 6 (lower is better)
Translates to: SQYFAYDVYSCSDLS*LFHLSRRGNKLDRR
Trigger: TCTTCTGTCCAATTTGTTCCCTCTTCTACTCAGGTGAAAAAGCAATGACAAATCACTGCAAGAGTACACGTCATAAGCAAAATACTGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000472758.5
ENST00000483421.7
ENST00000487638.5
ENST00000488126.2
ENST00000493576.6
CDS CAA 90 bp ACTAGTGATCTGCAGAATCTACTCTGGCAAATGTTGCTCAGTATTTaGCTTATGACGTGTACTCTTGCAGTGATTTGTCATTGCTTTTTC +
Preference number: 6 (lower is better)
Translates to: TSDLQNLLWQMLLSI*LMTCTLAVICHCFF
Trigger: GAAAAAGCAATGACAAATCACTGCAAGAGTACACGTCATAAGCAAAATACTGAGCAACATTTGCCAGAGTAGATTCTGCAGATCACTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS TCA 72 bp TGGACTACCTCTAAATGGATTTCTAATTCGATATGGTaGACGGGATCTGGATCTGGATCTGTATCTAGAAAT +
Preference number: 6 (lower is better)
Translates to: WTTSKWISNSIW*TGSGSGSVSRN
Trigger: ATTTCTAGATACAGATCCAGATCCAGATCCCGTTCACCATATCGAATTAGAAATCCATTTAGAGGTAGTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
ENST00000464375.5
ENST00000466330.5
ENST00000466975.5
ENST00000475743.1
ENST00000494621.5
CDS TCA 72 bp ACAAAGGGAGAAGCAACCCAACTGTCCATCAATGGATaGGTGGATATAAAAATGTGTTACATGCGTAAAACA +
Preference number: 6 (lower is better)
Translates to: TKGEATQLSING*VDIKMCYMRKT
Trigger: TGTTTTACGCATGTAACACATTTTTATATCCACTCATCCATTGATGGACAGTTGGGTTGCTTCTCCCTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409407.4
CDS GCA 72 bp TACGTACTTCAAGTGGATCTTCTGTGTAGCCATATTTaGTTGCATGCCCATAATCGATCACATTACTTGAAA +
Preference number: 6 (lower is better)
Translates to: YVLQVDLLCSHI*LHAHNRSHYLK
Trigger: TTTCAAGTAATGTGATCGATTATGGGCATGCAAGCAAATATGGCTACACAGAAGATCCACTTGAAGTACGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS GCA 72 bp TCATTAGGTTTAACAGAGGGACTATCAGTTGCTGTTTaGACCTCACTTTCATCAATTGGACTGTTTTTCAAG +
Preference number: 6 (lower is better)
Translates to: SLGLTEGLSVAV*TSLSSIGLFFK
Trigger: CTTGAAAAACAGTCCAATTGATGAAAGTGAGGTGCAAACAGCAACTGATAGTCCCTCTGTTAAACCTAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS GCA 72 bp ACTTTAATAATGGAGTGTCATATGAGACTAGTGATCTaGAGAATCTACTCTGGCAAATGTTGCTGTTCAAGG +
Preference number: 6 (lower is better)
Translates to: TLIMECHMRLVI*RIYSGKCCCSR
Trigger: CCTTGAACAGCAACATTTGCCAGAGTAGATTCTGCAGATCACTAGTCTCATATGACACTCCATTATTAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460310.1
CDS CAA 72 bp TCTGGTATAGTCACAGGTTTGTTAGAGTCTTTGTTTTaGACATTCCCAGTCTTTTTGGCTTCTAGAGACTTC +
Preference number: 6 (lower is better)
Translates to: SGIVTGLLESLF*TFPVFLASRDF
Trigger: GAAGTCTCTAGAAGCCAAAAAGACTGGGAATGTCAAAAACAAAGACTCTAACAAACCTGTGACTATACCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000487638.5
CDS CAA 72 bp CTCATTAGGTTTAACAGAGGGACTATCAGTTGCTGTTaGCACCTCACTTTCATCAATTGGACTGTTTTTCAA +
Preference number: 6 (lower is better)
Translates to: LIRFNRGTISCC*HLTFINWTVFQ
Trigger: TTGAAAAACAGTCCAATTGATGAAAGTGAGGTGCAAACAGCAACTGATAGTCCCTCTGTTAAACCTAATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS CAA 72 bp TTTGCTTATGACGTGTACTCTTGCAGTGATTTGTCATaGCTTTTTCACCTGAGTAGAAGAGGGAACAAATTG +
Preference number: 6 (lower is better)
Translates to: FAYDVYSCSDLS*LFHLSRRGNKL
Trigger: CAATTTGTTCCCTCTTCTACTCAGGTGAAAAAGCAATGACAAATCACTGCAAGAGTACACGTCATAAGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000460310.1
ENST00000461991.3
ENST00000472758.5
ENST00000483421.7
ENST00000487638.5
ENST00000488126.2
ENST00000493576.6
CDS CAA 72 bp TTTGTGCAAAATTCCAGAGCTCGTTGGAAAAAGTACTaGAACATAAATCGCTGGATCCTGGTGACAAGTTTT +
Preference number: 6 (lower is better)
Translates to: FVQNSRARWKKY*NINRWILVTSF
Trigger: AAAACTTGTCACCAGGATCCAGCGATTTATGTTCAAGTACTTTTTCCAACGAGCTCTGGAATTTTGCACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417778.5
CDS CAA 90 bp GAAATGAAATCTTCTGCTTCAGATGGAGATTCTTCTAGAATTCCTTaGAGGTTCCTTTCTTCTGCAAACACACTGTCAGATGGTAACAAT +
Preference number: 6 (lower is better)
Translates to: EMKSSASDGDSSRIP*RFLSSANTLSDGNN
Trigger: ATTGTTACCATCTGACAGTGTGTTTGCAGAAGAAAGGAACCTCAAAGGAATTCTAGAAGAATCTCCATCTGAAGCAGAAGATTTCATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS CAA 90 bp CATTGGATAATTCTTACCTTTTTCTTTCTCAGGGAAAACCTCCCTTaGTTAATCCCATCTGGCCATTCTTTGCACAATATTCTCCAAGAT +
Preference number: 6 (lower is better)
Translates to: HWIILTFFFLRENLP*LIPSGHSLHNILQD
Trigger: ATCTTGGAGAATATTGTGCAAAGAATGGCCAGATGGGATTAACAAAGGGAGGTTTTCCCTGAGAAAGAAAAAGGTAAGAATTATCCAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488126.2
CDS GCA 72 bp TTAAAAGTCAACCTAGCAATAATTTCGAAAGAACCCTaGAAGAAACAGCCCTATACTCATCTTTGTATGTCC +
Preference number: 6 (lower is better)
Translates to: LKVNLAIISKEP*KKQPYTHLCMS
Trigger: GGACATACAAAGATGAGTATAGGGCTGTTTCTTGCAGGGTTCTTTCGAAATTATTGCTAGGTTGACTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487638.5
CDS CCA 72 bp AGAGGAAGCCAAAATGGATTCAAAGTAGCTGCATTCTaGAGACAATCATGTTACATACAAAGAGTCACTATA +
Preference number: 6 (lower is better)
Translates to: RGSQNGFKVAAF*RQSCYIQRVTI
Trigger: TATAGTGACTCTTTGTATGTAACATGATTGTCTCCAGAATGCAGCTACTTTGAATCCATTTTGGCTTCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409407.4
CDS CAA 72 bp ATTCTTACCTTTTTCTTTCTCAGGGAAAACCTCCCTTaGTTAATCCCATCTGGCCATTCTTTGCACAATATT +
Preference number: 6 (lower is better)
Translates to: ILTFFFLRENLP*LIPSGHSLHNI
Trigger: AATATTGTGCAAAGAATGGCCAGATGGGATTAACAAAGGGAGGTTTTCCCTGAGAAAGAAAAAGGTAAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460310.1
ENST00000488126.2
CDS CAA 90 bp TATGGTCACCAATATTTTGTGGATTTTGTTTCAGAAAGCTATACATaGACTGAGCAGATTCAGGACTATCTAACTGAAGAATTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: YGHQYFVDFVSESYT*TEQIQDYLTEELPC
Trigger: ACAAGGCAATTCTTCAGTTAGATAGTCCTGAATCTGCTCAGTCAATGTATAGCTTTCTGAAACAAAATCCACAAAATATTGGTGACCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000487638.5
ENST00000494241.5
CDS CAA 90 bp TATGGTCACCAATATTTTGTGGATTTTGTTTCAGAAAGCTATACATaGACTGAGCAGATTCAGGACTATCTAACTGAAGAATTGCCTTTG +
Preference number: 6 (lower is better)
Translates to: YGHQYFVDFVSESYT*TEQIQDYLTEELPL
Trigger: CAAAGGCAATTCTTCAGTTAGATAGTCCTGAATCTGCTCAGTCAATGTATAGCTTTCTGAAACAAAATCCACAAAATATTGGTGACCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409407.4
CDS TCA 72 bp ATACTAGTTTTACTAGTTTCATCAGGCTTATTAGCCTaGCCCACTCCTTTATTTGGGTATGCCTTGAATAAA +
Preference number: 6 (lower is better)
Translates to: ILVLLVSSGLLA*PTPLFGYALNK
Trigger: TTTATTCAAGGCATACCCAAATAAAGGAGTGGGTCAGGCTAATAAGCCTGATGAAACTAGTAAAACTAGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264447.9
ENST00000409407.4
ENST00000409544.5
ENST00000487638.5
CDS CAA 72 bp CATATTTGCTTGCATGCCCATAATCGATCACATTACTaGAAACTGCTTCACTACCAAGTGTTTCTTTATTTC +
Preference number: 6 (lower is better)
Translates to: HICLHAHNRSHY*KLLHYQVFLYF
Trigger: GAAATAAAGAAACACTTGGTAGTGAAGCAGTTTCAAGTAATGTGATCGATTATGGGCATGCAAGCAAATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS CAA 72 bp CCTAAAAGGAATGAAAGCCGATACTTAAACATGTATTaGTACACCCATGTTCACAGAAGCATTATTCACAAC +
Preference number: 6 (lower is better)
Translates to: PKRNESRYLNMY*YTHVHRSIIHN
Trigger: GTTGTGAATAATGCTTCTGTGAACATGGGTGTACAAATACATGTTTAAGTATCGGCTTTCATTCCTTTTAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409407.4
CDS TCA 72 bp ATATTTGCTTGCATGCCCATAATCGATCACATTACTTaGAACTGCTTCACTACCAAGTGTTTCTTTATTTCT +
Preference number: 6 (lower is better)
Translates to: IFACMPIIDHIT*NCFTTKCFFIS
Trigger: AGAAATAAAGAAACACTTGGTAGTGAAGCAGTTTCAAGTAATGTGATCGATTATGGGCATGCAAGCAAATAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264447.9
ENST00000409544.5
ENST00000410075.5
CDS GCA 72 bp TTTTTAATAATGGAGTGTCATATGAGACTAGTGATCTaGAGAATCTACTCTGGCAAATGTTGCTCAGTATTT +
Preference number: 6 (lower is better)
Translates to: FLIMECHMRLVI*RIYSGKCCSVF
Trigger: AAATACTGAGCAACATTTGCCAGAGTAGATTCTGCAGATCACTAGTCTCATATGACACTCCATTATTAAAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461991.3
CDS GCA 72 bp CTCAGCCAAAGTCTTTCTTTTTCTAATTCTGGGTCATaGTCAATTTGCACCTGTAATATAATCAGCATTTTA +
Preference number: 6 (lower is better)
Translates to: LSQSLSFSNSGS*SICTCNIISIL
Trigger: TAAAATGCTGATTATATTACAGGTGCAAATTGAGCATGACCCAGAATTAGAAAAAGAAAGACTTTGGCTGAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483421.7