Pregenerated sensors for ZNF628-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000269859Ensembl transcript IDs: ENST00000596646.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGCAGCGTCTGGATGAGCGTGCACGAAGCACACGCCCGAAAATCCTaGGCACGTGGCTCTACCGAGGGACTGGAAGCGCTCCAGGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: CSVWMSVHEAHARKS*ARGSTEGLEALQAS Trigger: CGAGGCCTGGAGCGCTTCCAGTCCCTCGGTAGAGCCACGTGCTCAGGATTTTCGGGCGTGTGCTTCGTGCACGCTCATCCAGACGCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596646.1 |
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| CDS CCA 90 bp | CTGGATGAGCGTGCACGAAGCACACGCCCGAAAATCCTGAGCACGTaGCTCTACCGAGGGACTGGAAGCGCTCCAGGCCTCGTTTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: LDERARSTRPKILST*LYRGTGSAPGLVFP Trigger: CGGGAAAACGAGGCCTGGAGCGCTTCCAGTCCCTCGGTAGAGCCACGTGCTCAGGATTTTCGGGCGTGTGCTTCGTGCACGCTCATCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596646.1 |
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| CDS CCA 90 bp | AAGCACACGCCCGAAAATCCTGAGCACGTGGCTCTACCGAGGGACTaGAAGCGCTCCAGGCCTCGTTTTCCCGCTGGAGCGATTACACCC | + |
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Preference number: 5 (lower is better) Translates to: KHTPENPEHVALPRD*KRSRPRFPAGAITP Trigger: GGGTGTAATCGCTCCAGCGGGAAAACGAGGCCTGGAGCGCTTCCAGTCCCTCGGTAGAGCCACGTGCTCAGGATTTTCGGGCGTGTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596646.1 |
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| CDS TCA 90 bp | AACAGACCTTTGCCCAGCAGGAACCAGGTTTCTGCAGCGTCTGGATaGGCGTGCACGAAGCACACGCCCGAAAATCCTGAGCACGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: NRPLPSRNQVSAASG*ACTKHTPENPEHVA Trigger: AGCCACGTGCTCAGGATTTTCGGGCGTGTGCTTCGTGCACGCTCATCCAGACGCTGCAGAAACCTGGTTCCTGCTGGGCAAAGGTCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596646.1 |
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| CDS CCA 72 bp | CCCGAAAATCCTGAGCACGTGGCTCTACCGAGGGACTaGAAGCGCTCCAGGCCTCGTTTTCCCGCTGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: PENPEHVALPRD*KRSRPRFPAGA Trigger: CGCTCCAGCGGGAAAACGAGGCCTGGAGCGCTTCCAGTCCCTCGGTAGAGCCACGTGCTCAGGATTTTCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596646.1 |
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| CDS CCA 72 bp | CGTGCACGAAGCACACGCCCGAAAATCCTGAGCACGTaGCTCTACCGAGGGACTGGAAGCGCTCCAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RARSTRPKILST*LYRGTGSAPGL Trigger: GAGGCCTGGAGCGCTTCCAGTCCCTCGGTAGAGCCACGTGCTCAGGATTTTCGGGCGTGTGCTTCGTGCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596646.1 |
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| CDS TCA 72 bp | TGGATGAGCGTGCACGAAGCACACGCCCGAAAATCCTaGGCACGTGGCTCTACCGAGGGACTGGAAGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: WMSVHEAHARKS*ARGSTEGLEAL Trigger: GAGCGCTTCCAGTCCCTCGGTAGAGCCACGTGCTCAGGATTTTCGGGCGTGTGCTTCGTGCACGCTCATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596646.1 |
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| CDS GCA 72 bp | GCAGATGAGAGGGAATCGGGATTAATAAGGGGAACTTaGGACCCCGCGTCTCGAGCTGGCCGTCCCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: ADERESGLIRGT*DPASRAGRPWP Trigger: AGGCCAGGGACGGCCAGCTCGAGACGCGGGGTCGCAAGTTCCCCTTATTAATCCCGATTCCCTCTCATCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596646.1 |
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| CDS TCA 72 bp | TTGCCCAGCAGGAACCAGGTTTCTGCAGCGTCTGGATaGGCGTGCACGAAGCACACGCCCGAAAATCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LPSRNQVSAASG*ACTKHTPENPE Trigger: CTCAGGATTTTCGGGCGTGTGCTTCGTGCACGCTCATCCAGACGCTGCAGAAACCTGGTTCCTGCTGGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596646.1 |
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| CDS CCA 72 bp | ACCTTTGCCCAGCAGGAACCAGGTTTCTGCAGCGTCTaGATGAGCGTGCACGAAGCACACGCCCGAAAATCC | + |
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Preference number: 6 (lower is better) Translates to: TFAQQEPGFCSV*MSVHEAHARKS Trigger: GGATTTTCGGGCGTGTGCTTCGTGCACGCTCATCCAGACGCTGCAGAAACCTGGTTCCTGCTGGGCAAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596646.1 |
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| CDS CCA 72 bp | TCTCCCACTAAAACCCTAGGCCCCACAAGGAGTCTGTaGATTCCAGCCTCCCAGAACAGACCTTTGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPTKTLGPTRSL*IPASQNRPLPS Trigger: GCTGGGCAAAGGTCTGTTCTGGGAGGCTGGAATCCACAGACTCCTTGTGGGGCCTAGGGTTTTAGTGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596646.1 |
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