RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF621 (Homo sapiens)

Ensembl gene IDs: ENSG00000172888

Ensembl transcript IDs: ENST00000310898.5, ENST00000339296.10, ENST00000403205.6, ENST00000431278.5, ENST00000462161.5, ENST00000490457.5, ENST00000492098.1

Found 424 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCGAACTCAAGTTGGCTCCATATGTTCTCATTCTAGCACGGGGCTaGAGGCGCAGCCACTTTCTGGAGCTTGCTGTTCTCTCGCCGAAG +
Preference number: 1 (lower is better)
Translates to: SELKLAPYVLILARG*RRSHFLELAVLSPK
Trigger: CTTCGGCGAGAGAACAGCAAGCTCCAGAAAGTGGCTGCGCCTTCAGCCCCGTGCTAGAATGAGAACATATGGAGCCAACTTGAGTTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CCA 90 bp AGGCACCAGCAGCTGCTGAGTTTCCACTGGAACCACTTGGTTCTGTaGTTGGTCATTTTTCCTGGCTTCTGCCTATGTGGCATCCCAGCT +
Preference number: 1 (lower is better)
Translates to: RHQQLLSFHWNHLVL*LVIFPGFCLCGIPA
Trigger: AGCTGGGATGCCACATAGGCAGAAGCCAGGAAAAATGACCAACCACAGAACCAAGTGGTTCCAGTGGAAACTCAGCAGCTGCTGGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CCA 90 bp GCAAAGGTGGAGGGTGCTGGACGATTGGCAGGCAGCACTTGGGACTaGATTCCTGGGATGAGACAGAATGAGAGCAGTAGCAGAATAAAG +
Preference number: 1 (lower is better)
Translates to: AKVEGAGRLAGSTWD*IPGMRQNESSSRIK
Trigger: CTTTATTCTGCTACTGCTCTCATTCTGTCTCATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAATCGTCCAGCACCCTCCACCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CCA 90 bp ACATCTGTTTTACAACAAGAAATAGGTGGCAAAGGTGGAGGGTGCTaGACGATTGGCAGGCAGCACTTGGGACTGGATTCCTGGGATGAG +
Preference number: 1 (lower is better)
Translates to: TSVLQQEIGGKGGGC*TIGRQHLGLDSWDE
Trigger: CTCATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAATCGTCCAGCACCCTCCACCTTTGCCACCTATTTCTTGTTGTAAAACAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR GCA 90 bp CAAACATCTGTTTTACAACAAGAAATAGGTGGCAAAGGTGGAGGGTaGTGGACGATTGGCAGGCAGCACTTGGGACTGGATTCCTGGGAT +
Preference number: 1 (lower is better)
Translates to: QTSVLQQEIGGKGGG*WTIGRQHLGLDSWD
Trigger: ATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAATCGTCCAGCACCCTCCACCTTTGCCACCTATTTCTTGTTGTAAAACAGATGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR TCA 90 bp TTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTTaGACCCCTCAAGATCATCCATCAGGGTTGAGGTCAATGTCTTCT +
Preference number: 1 (lower is better)
Translates to: LLFPPHLQLLRPLKS*TPQDHPSGLRSMSS
Trigger: AGAAGACATTGACCTCAACCCTGATGGATGATCTTGAGGGGTTCAAGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR CCA 90 bp CTTGGACATACATATATAACCAACTCCCACCGAGCAGGTACACCCTaGCTGAAGACAGAAGACCCTACCAAAATGATTGTAGGGGTATTT +
Preference number: 1 (lower is better)
Translates to: LGHTYITNSHRAGTP*LKTEDPTKMIVGVF
Trigger: AAATACCCCTACAATCATTTTGGTAGGGTCTTCTGTCTTCAGCCAGGGTGTACCTGCTCGGTGGGAGTTGGTTATATATGTATGTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CCA 90 bp TCAAACTTTCCTGCAGCTTCCTCACTTCTCTCAGCCTTCATACAATaGCAGTTATGGCCTTGCTCTGGATTAGGTTTTGGCTTAAGGGAA +
Preference number: 1 (lower is better)
Translates to: SNFPAASSLLSAFIQ*QLWPCSGLGFGLRE
Trigger: TTCCCTTAAGCCAAAACCTAATCCAGAGCAAGGCCATAACTGCCATTGTATGAAGGCTGAGAGAAGTGAGGAAGCTGCAGGAAAGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR GCA 90 bp CTTCTTAAACCTCATGAACCAACCTCTGCTAGCTTCAAACTTTCCTaGAGCTTCCTCACTTCTCTCAGCCTTCATACAATGGCAGTTATG +
Preference number: 1 (lower is better)
Translates to: LLKPHEPTSASFKLS*SFLTSLSLHTMAVM
Trigger: CATAACTGCCATTGTATGAAGGCTGAGAGAAGTGAGGAAGCTGCAGGAAAGTTTGAAGCTAGCAGAGGTTGGTTCATGAGGTTTAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CCA 90 bp AGGAACCAGAAGTGGGTTACTGAGTGTGACAGAACCTTAAAACACTaGCACTGTTTAGTGGAAGTGACTGAGAATACGGTGGTGAAGAAT +
Preference number: 1 (lower is better)
Translates to: RNQKWVTECDRTLKH*HCLVEVTENTVVKN
Trigger: ATTCTTCACCACCGTATTCTCAGTCACTTCCACTAAACAGTGCCAGTGTTTTAAGGTTCTGTCACACTCAGTAACCCACTTCTGGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR TCA 90 bp GAAACGTTAAGGGCCTCCATGAAGTTACTGGTCATGAATTTAAAGTaGCAGTTCAGCCTGGTAATATGCTTTCTCCTGATCATTTTTGGT +
Preference number: 1 (lower is better)
Translates to: ETLRASMKLLVMNLK*QFSLVICFLLIIFG
Trigger: ACCAAAAATGATCAGGAGAAAGCATATTACCAGGCTGAACTGTCACTTTAAATTCATGACCAGTAACTTCATGGAGGCCCTTAACGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR TCA 90 bp CTATGGCAGCCACAGCCTTACAAAATGTATTCCTTAAATAATACTTaGAAGTCAAAATTACTCCTTGACCCATGGAGTAATGGATCCTGC +
Preference number: 1 (lower is better)
Translates to: LWQPQPYKMYSLNNT*KSKLLLDPWSNGSC
Trigger: GCAGGATCCATTACTCCATGGGTCAAGGAGTAATTTTGACTTTCAAGTATTATTTAAGGAATACATTTTGTAAGGCTGTGGCTGCCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR GCA 90 bp TTCACATTATCTTTTTCACAGATGTATGAGATTCTCAAAGATCTGTaGCAAGGGCAACATAACTTCAACTGTATTAATACCCCACCTAGC +
Preference number: 1 (lower is better)
Translates to: FTLSFSQMYEILKDL*QGQHNFNCINTPPS
Trigger: GCTAGGTGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAATCTCATACATCTGTGAAAAAGATAATGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
3UTR TCA 90 bp AATATTTTATTGCTAAAAGATGTTAACGATAATCTAAGTCTTCAGTaGGTCTTTGTTGCTGGAAGACAGTCTTGCCTCACTGTTGATGGC +
Preference number: 1 (lower is better)
Translates to: NILLLKDVNDNLSLQ*VFVAGRQSCLTVDG
Trigger: GCCATCAACAGTGAGGCAAGACTGTCTTCCAGCAACAAAGACTCACTGAAGACTTAGATTATCGTTAACATCTTTTAGCAATAAAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR CCA 90 bp GGCGAAACGAGGTGGCCACAGCCCTTCCGAACTCAAGTTGGCTCCATATGTTCTCAGGCTGAAGCACAGTaGTGCAACCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: GETRWPQPFRTQVGSICSQAEAQ*CNLSSL
Trigger: CAGTGAGCTGAGGTTGCACCACTGTGCTTCAGCCTG...AGAACATATGGAGCCAACTTGAGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR GCA 90 bp TTGGCAGGCAGCACTTGGGACTGGATTCCTGGGATGAGACAGAATGAGAGCAGTGCTGGAAGACAGTCTTaGCTCACTGTTGATGGCTGC +
Preference number: 2 (lower is better)
Translates to: LAGSTWDWIPGMRQNESSAGRQS*LTVDGC
Trigger: GCAGCCATCAACAGTGAGGCAAGACTGTCTTCCAGC...ACTGCTCTCATTCTGTCTCATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CCA 90 bp TTGGCAGGCAGCACTTGGGACTGGATTCCTGGGATGAGACAGAATGAGAGCAGTAAGGTGAAAAGTAGATaGGCGAAACGAGGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: LAGSTWDWIPGMRQNESSKVKSR*AKRGGH
Trigger: GTGGCCACCTCGTTTCGCCCATCTACTTTTCACCTT...ACTGCTCTCATTCTGTCTCATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CCA 90 bp CAAGGGCAACATAACTTCAACTGTATTAATACCCCACCTAGCCATGGGCCCACTTGTTTGAGACCAGCCTaGCCAAGATGGCGAAACCCC +
Preference number: 2 (lower is better)
Translates to: QGQHNFNCINTPPSHGPTCLRPA*PRWRNP
Trigger: GGGGTTTCGCCATCTTGGCCAGGCTGGTCTCAAACA...AGTGGGCCCATGGCTAGGTGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
3UTR-3UTR CCA 90 bp TTGGCAGGCAGCACTTGGGACTGGATTCCTGGGATGAGACAGAATGAGAGCAGTTCTCCTGATCATTTTTaGTGCAGGAACAGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: LAGSTWDWIPGMRQNESSSPDHF*CRNREG
Trigger: GCCTTCTCTGTTCCTGCACCAAAAATGATCAGGAGA...ACTGCTCTCATTCTGTCTCATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CCA 90 bp GGCGAAACGAGGTGGCCACAGCCCTTCCGAACTCAAGTTGGCTCCATATGTTCTCTGAGAGGGATGCTTTaGAAGTTACAGAAGAGAGAA +
Preference number: 2 (lower is better)
Translates to: GETRWPQPFRTQVGSICSLRGML*KLQKRE
Trigger: TTCTCTCTTCTGTAACTTCCAAAGCATCCCTCTCAG...AGAACATATGGAGCCAACTTGAGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR TCA 90 bp GAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATATAATTCTAGCACGGGGCTaGAGGCGCAGCCACTTTCTG +
Preference number: 2 (lower is better)
Translates to: ESKTCISQKPLQLGHTYIILARG*RRSHFL
Trigger: CAGAAAGTGGCTGCGCCTTCAGCCCCGTGCTAGAAT...TATATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CAA 90 bp CTTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTaGAACCCCTCAAGATCATCCATCAGGGTTGAGGTCAATGTCTTC +
Preference number: 2 (lower is better)
Translates to: LAISTTSAVTSSTEV*NPSRSSIRVEVNVF
Trigger: GAAGACATTGACCTCAACCCTGATGGATGATCTTGAGGGGTTCAAGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR TCA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCACTGTTGTTCAAGCCTaGAAGGGACCAATGCAAAGG +
Preference number: 2 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVTVVQA*KGPMQR
Trigger: CCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGT...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
3UTR-3UTR GCA 90 bp CCCACTAAACAATCTCCATTAATCTCTACAGTCCATTGTTGGAAGCTTATTCCACCAGGAGGGGGAGGTTaGAGTGAGCCAAGATCACAC +
Preference number: 2 (lower is better)
Translates to: PTKQSPLISTVHCWKLIPPGGGG*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAACCTCCCCCTCCTGG...TGGAATAAGCTTCCAACAATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
3UTR-3UTR CCA 90 bp TTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACATGTTTGAGACCAGCCTaGCCAAGATGGCGAAACCCC +
Preference number: 2 (lower is better)
Translates to: FPEGFQVTLYRTTTMAATCLRPA*PRWRNP
Trigger: GGGGTTTCGCCATCTTGGCCAGGCTGGTCTCAAACA...TGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CCA 90 bp TTGGCAGGCAGCACTTGGGACTGGATTCCTGGGATGAGACAGAATGAGAGCAGTTCTACAGTCCATTGTTaGAAGCTTATTCCAATTCTC +
Preference number: 2 (lower is better)
Translates to: LAGSTWDWIPGMRQNESSSTVHC*KLIPIL
Trigger: GAGAATTGGAATAAGCTTCCAACAATGGACTGTAGA...ACTGCTCTCATTCTGTCTCATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAATGGCTTCTGCCTATGTaGCATCCCAGCTTAGCTCCT +
Preference number: 2 (lower is better)
Translates to: GFQVTLYRTTTMAATALQWLLPM*HPSLAP
Trigger: AGGAGCTAAGCTGGGATGCCACATAGGCAGAAGCCA...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CCA 90 bp AGTGGGCTTAAAATATTCAGTAATCCATGCTGTAAACAGATGTGCTGTCATCCAAGGGTGCTGGACGATTaGCAGGCAGCACTTGGGACT +
Preference number: 2 (lower is better)
Translates to: SGLKIFSNPCCKQMCCHPRVLDD*QAALGT
Trigger: AGTCCCAAGTGCTGCCTGCCAATCGTCCAGCACCCT...TGGATGACAGCACATCTGTTTACAGCATGGATTACTGAATATTTTAAGCCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR GCA 90 bp AATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACAGCAACCTCAGCTCACTaGAACCTCTGCCTCTGGATT +
Preference number: 2 (lower is better)
Translates to: NLYSPLLEAYSNSLPVATATSAH*NLCLWI
Trigger: AATCCAGAGGCAGAGGTTGCAGTGAGCTGAGGTTGC...TGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR GCA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTGCTGAAGCACAGTGGTaGAACCTCAGCTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: FICSMCCCWIAFYPQWNIAEAQW*NLSSLQ
Trigger: TTGCAGTGAGCTGAGGTTGCACCACTGTGCTTCAGC...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR GCA 90 bp AATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACACCAGCAACCCCACGATaGAGATACAGCCACTGTTGT +
Preference number: 2 (lower is better)
Translates to: NLYSPLLEAYSNSLPVATPATPR*RYSHCC
Trigger: ACAACAGTGGCTGTATCTGCATCGTGGGGTTGCTGG...TGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
3UTR-3UTR CCA 90 bp TGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAGACCGTGAAACGACCTTCCTaGTGGTCCAGTCTCTTCAAT +
Preference number: 2 (lower is better)
Translates to: CSGLGFGLREFVVGLIQTVKRPS*WSSLFN
Trigger: ATTGAAGAGACTGGACCACCAGGAAGGTCGTTTCAC...GGTCTGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CCA 90 bp GCCTTGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAACAACAAGAAATAGGTaGCAAAGGTGGAGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: ALLWIRFWLKGICGWFDPTTRNR*QRWRVL
Trigger: CAGCACCCTCCACCTTTGCCACCTATTTCTTGTTGT...TGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR GCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAGCTCACTGCAACCTCTaGCTCTGGATTCAAGCAATT +
Preference number: 2 (lower is better)
Translates to: GFQVTLYRTTTMAATALQAHCNL*LWIQAI
Trigger: AATTGCTTGAATCCAGAGGCAGAGGTTGCAGTGAGC...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR GCA 90 bp CTAGTTATCTTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTGCTCACTGCAACCTCTaGCTCTGGATTCAAGCAATT +
Preference number: 2 (lower is better)
Translates to: LVILLFPPHLQLLRPLKSAHCNL*LWIQAI
Trigger: AATTGCTTGAATCCAGAGGCAGAGGTTGCAGTGAGC...AGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAGATAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR GCA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTGCAACCTCAGCTCACTaGAACCTCTGCCTCTGGATT +
Preference number: 2 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVATSAH*NLCLWI
Trigger: AATCCAGAGGCAGAGGTTGCAGTGAGCTGAGGTTGC...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR CCA 90 bp CTAGTTATCTTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTTGCAACCTCTGCCTCTaGATTCAAGCAATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: LVILLFPPHLQLLRPLKSCNLCL*IQAILL
Trigger: CAGGAGAATTGCTTGAATCCAGAGGCAGAGGTTGCA...AGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAGATAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR CCA 90 bp AGCAGACATAAAAACATTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTGCAGGCTGAAGCACAGTaGTGCAACCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SRHKNINLFVHLHQNSWVQAEAQ*CNLSSL
Trigger: CAGTGAGCTGAGGTTGCACCACTGTGCTTCAGCCTG...CACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR CCA 90 bp GAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATATAAAACGACCTTCCTGGTaGTCCAGTCTCTTCAATGGG +
Preference number: 2 (lower is better)
Translates to: ESKTCISQKPLQLGHTYIKRPSW*SSLFNG
Trigger: CCCATTGAAGAGACTGGACCACCAGGAAGGTCGTTT...TATATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR GCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAATCAGAGATGAGGTTTTaGCAAGCGAGCATGACAAAG +
Preference number: 2 (lower is better)
Translates to: GFQVTLYRTTTMAATALQSEMRF*QASMTK
Trigger: CTTTGTCATGCTCGCTTGGCAAAACCTCATCTCTGA...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CCA 90 bp AGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACATTACTCCTTGACCCATaGAGTAATGGATCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: RFSSYFVQNNHYGSHSLTLLLDP*SNGSCR
Trigger: TCTGCAGGATCCATTACTCCATGGGTCAAGGAGTAA...TGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR CCA 90 bp CTAGTTATCTTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTTTACTCCTTGACCCATaGAGTAATGGATCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: LVILLFPPHLQLLRPLKSLLLDP*SNGSCR
Trigger: TCTGCAGGATCCATTACTCCATGGGTCAAGGAGTAA...AGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAGATAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR CCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAAGCATGTGTTGCTGTTaGATAGCCTTTTACCCACAG +
Preference number: 2 (lower is better)
Translates to: GFQVTLYRTTTMAATALQSMCCC*IAFYPQ
Trigger: CTGTGGGTAAAAGGCTATCCAACAGCAACACATGCT...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR CAA 90 bp GCAATTCAGTCACATATGCAGGTTCCACTTCTAAGTCTAGTTATCTaGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCT +
Preference number: 2 (lower is better)
Translates to: AIQSHMQVPLLSLVI*LFPPHLQLLRPLKS
Trigger: AGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAGATAACTAGACTTAGAAGTGGAACCTGCATATGTGACTGAATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR TCA 90 bp TGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAGACCAATCTAAGTCTTCAGTaGGTCTTTGTTGCTGGAAGA +
Preference number: 2 (lower is better)
Translates to: CSGLGFGLREFVVGLIQTNLSLQ*VFVAGR
Trigger: TCTTCCAGCAACAAAGACTCACTGAAGACTTAGATT...GGTCTGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR TCA 90 bp TATGTTTCTCCCAGGCTGCTTATCTCTAATCATAATGGCCTAATACAGGGATATACTGTTGTTCAAGCCTaGAAGGGACCAATGCAAAGG +
Preference number: 2 (lower is better)
Translates to: YVSPRLLISNHNGLIQGYTVVQA*KGPMQR
Trigger: CCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGT...ATATCCCTGTATTAGGCCATTATGATTAGAGATAAGCAGCCTGGGAGAAACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
3UTR-3UTR TCA 90 bp AGTGGGCTTAAAATATTCAGTAATCCATGCTGTAAACAGATGTGCTGTCATCCATCTTCAGTCTACTGCTaGTCACTGACACGGAATGAG +
Preference number: 2 (lower is better)
Translates to: SGLKIFSNPCCKQMCCHPSSVYC*SLTRNE
Trigger: CTCATTCCGTGTCAGTGATCAGCAGTAGACTGAAGA...TGGATGACAGCACATCTGTTTACAGCATGGATTACTGAATATTTTAAGCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CCA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACTGCAACCTCTGCCTCTaGATTCAAGCAATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: FLSERFICSMCCCWIAFYCNLCL*IQAILL
Trigger: CAGGAGAATTGCTTGAATCCAGAGGCAGAGGTTGCA...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR TCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAAATTTGTGGTTGGTTTaGTCCAGACCCCTAAAACTT +
Preference number: 2 (lower is better)
Translates to: GFQVTLYRTTTMAATALQNLWLV*SRPLKL
Trigger: AAGTTTTAGGGGTCTGGATCAAACCAACCACAAATT...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR GCA 90 bp TGGTCTAATTTCAATACTGTTGTGTCTGAGAGAATAGTGAGGTCTGAGGAGAGGATCTGTAGCATGTGTTaGTGTTGGATAGCCTTTTAC +
Preference number: 2 (lower is better)
Translates to: WSNFNTVVSERIVRSEERICSMC*CWIAFY
Trigger: GTAAAAGGCTATCCAACAGCAACACATGCTACAGAT...CCTCTCCTCAGACCTCACTATTCTCTCAGACACAACAGTATTGAAATTAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CCA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTCTCCATCAGAACTCTTaGGTGACCAGACACATTATC +
Preference number: 2 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVLHQNS*VTRHII
Trigger: GATAATGTGTCTGGTCACCCAAGAGTTCTGATGGAG...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR CCA 90 bp AGTGGGCTTAAAATATTCAGTAATCCATGCTGTAAACAGATGTGCTGTCATCCAAGCATGTGTTGCTGTTaGATAGCCTTTTACCCACAG +
Preference number: 2 (lower is better)
Translates to: SGLKIFSNPCCKQMCCHPSMCCC*IAFYPQ
Trigger: CTGTGGGTAAAAGGCTATCCAACAGCAACACATGCT...TGGATGACAGCACATCTGTTTACAGCATGGATTACTGAATATTTTAAGCCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR TCA 90 bp GAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATATATCACGTTTAAAGACATaGTTACTCTCACTGCCATCA +
Preference number: 2 (lower is better)
Translates to: ESKTCISQKPLQLGHTYISRLKT*LLSLPS
Trigger: TGATGGCAGTGAGAGTAATCATGTCTTTAAACGTGA...TATATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAATGGTAAATGAGCATTaGCTTCAACTTAAAGTTACC +
Preference number: 2 (lower is better)
Translates to: GFQVTLYRTTTMAATALQMVNEH*LQLKVT
Trigger: GGTAACTTTAAGTTGAAGCCAATGCTCATTTACCAT...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR GCA 90 bp AGTGGGCTTAAAATATTCAGTAATCCATGCTGTAAACAGATGTGCTGTCATCCAGAGATATTGCAGGTTTaGTTCCAGACAACTGTAATA +
Preference number: 2 (lower is better)
Translates to: SGLKIFSNPCCKQMCCHPEILQV*FQTTVI
Trigger: TATTACAGTTGTCTGGAAGCAAACCTGCAATATCTC...TGGATGACAGCACATCTGTTTACAGCATGGATTACTGAATATTTTAAGCCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR GCA 90 bp ATTCTCAAAGATCTGTGCCAAGGGCAACATAACTTCAACTGTATTAATACCCCAATGTTTCTCCCAGGCTaGTTATCTCTAATCATAATG +
Preference number: 2 (lower is better)
Translates to: ILKDLCQGQHNFNCINTPMFLPG*LSLIIM
Trigger: CATTATGATTAGAGATAAGCAGCCTGGGAGAAACAT...TGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
3UTR CAA 90 bp AATTACTCCTTGACCCATGGAGTAATGGATCCTGCAGAATGGATGTaGTTTAGCAGACATAAAAACATTAATCTCTTTGTACATCTCCAT +
Preference number: 2 (lower is better)
Translates to: NYSLTHGVMDPAEWM*FSRHKNINLFVHLH
Trigger: ATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCTAAACAACATCCATTCTGCAGGATCCATTACTCCATGGGTCAAGGAGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR TCA 72 bp GGGGGTGGCAGTCCAGTAGCAGGCACCAGCAGCTGCTaGGTTTCCACTGGAACCACTTGGTTCTGTGGTTGG +
Preference number: 3 (lower is better)
Translates to: GGGSPVAGTSSC*VSTGTTWFCGW
Trigger: CCAACCACAGAACCAAGTGGTTCCAGTGGAAACTCAGCAGCTGCTGGTGCCTGCTACTGGACTGCCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR GCA 72 bp AGCACGGGGCTGAAGGCGCAGCCACTTTCTGGAGCTTaGTGTTCTCTCGCCGAAGGCAGAAACATAACCATC +
Preference number: 3 (lower is better)
Translates to: STGLKAQPLSGA*CSLAEGRNITI
Trigger: GATGGTTATGTTTCTGCCTTCGGCGAGAGAACAGCAAGCTCCAGAAAGTGGCTGCGCCTTCAGCCCCGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CAA 90 bp TTGGCAGGCAGCACTTGGGACTGGATTCCTGGGATGAGACAGAATGAGAGCAGTGAAACTCAAATTAGGTaGGAGGCTGGGCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: LAGSTWDWIPGMRQNESSETQIR*EAGHSG
Trigger: GCCACTGTGCCCAGCCTCCAACCTAATTTGAGTTTC...ACTGCTCTCATTCTGTCTCATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR TCA 72 bp AAGTTGGCTCCATATGTTCTCATTCTAGCACGGGGCTaGAGGCGCAGCCACTTTCTGGAGCTTGCTGTTCTC +
Preference number: 3 (lower is better)
Translates to: KLAPYVLILARG*RRSHFLELAVL
Trigger: GAGAACAGCAAGCTCCAGAAAGTGGCTGCGCCTTCAGCCCCGTGCTAGAATGAGAACATATGGAGCCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR TCA 72 bp GAAGACAGTCTTGCCTCACTGTTGATGGCTGCTGAATaGTCGGTGTGGTGGTTGCTGAAGGTTAGTGTGGCT +
Preference number: 3 (lower is better)
Translates to: EDSLASLLMAAE*SVWWLLKVSVA
Trigger: AGCCACACTAACCTTCAGCAACCACCACACCGATCATTCAGCAGCCATCAACAGTGAGGCAAGACTGTCTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR CCA 72 bp TCCAGTAGCAGGCACCAGCAGCTGCTGAGTTTCCACTaGAACCACTTGGTTCTGTGGTTGGTCATTTTTCCT +
Preference number: 3 (lower is better)
Translates to: SSSRHQQLLSFH*NHLVLWLVIFP
Trigger: AGGAAAAATGACCAACCACAGAACCAAGTGGTTCCAGTGGAAACTCAGCAGCTGCTGGTGCCTGCTACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CAA 90 bp ACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCATGAAACTCAAATTAGGTaGGAGGCTGGGCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: TPPSHGPTKQSPLISTVHETQIR*EAGHSG
Trigger: GCCACTGTGCCCAGCCTCCAACCTAATTTGAGTTTC...ATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
3UTR TCA 72 bp CCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTTaGACCCCTCAAGATCATCCATCAGGGTTGAGGTCA +
Preference number: 3 (lower is better)
Translates to: PPHLQLLRPLKS*TPQDHPSGLRS
Trigger: TGACCTCAACCCTGATGGATGATCTTGAGGGGTTCAAGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR CAA 90 bp AGTGGGCTTAAAATATTCAGTAATCCATGCTGTAAACAGATGTGCTGTCATCCAGAGGGTGCTGGACGATaGGCAGGCAGCACTTGGGAC +
Preference number: 3 (lower is better)
Translates to: SGLKIFSNPCCKQMCCHPEGAGR*AGSTWD
Trigger: GTCCCAAGTGCTGCCTGCCAATCGTCCAGCACCCTC...TGGATGACAGCACATCTGTTTACAGCATGGATTACTGAATATTTTAAGCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CAA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAATTGGCAGGCAGCACTaGGGACTGGATTCCTGGGAT +
Preference number: 3 (lower is better)
Translates to: GFQVTLYRTTTMAATALQIGRQH*GLDSWD
Trigger: ATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAAT...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CAA 90 bp ATTCTCAAAGATCTGTGCCAAGGGCAACATAACTTCAACTGTATTAATACCCCAAAGGAGGAGAATCGCTaGAACCCAGGAGGGGGAGGT +
Preference number: 3 (lower is better)
Translates to: ILKDLCQGQHNFNCINTPKEENR*NPGGGG
Trigger: ACCTCCCCCTCCTGGGTTCAAGCGATTCTCCTCCTT...TGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
3UTR GCA 72 bp CCTCATGAACCAACCTCTGCTAGCTTCAAACTTTCCTaGAGCTTCCTCACTTCTCTCAGCCTTCATACAATG +
Preference number: 3 (lower is better)
Translates to: PHEPTSASFKLS*SFLTSLSLHTM
Trigger: CATTGTATGAAGGCTGAGAGAAGTGAGGAAGCTGCAGGAAAGTTTGAAGCTAGCAGAGGTTGGTTCATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CCA 72 bp ATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTaGACATACATATATAACCAACTCCCACCGAGCAGG +
Preference number: 3 (lower is better)
Translates to: IQNLYFPEAPAT*TYIYNQLPPSR
Trigger: CCTGCTCGGTGGGAGTTGGTTATATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CCA 72 bp CACAACTTGACTGTTTGGCAGAAGCAGTCTAGCTTTTaGCCTATCTCAGCTGTTGACATTAGCCTTCCTCAC +
Preference number: 3 (lower is better)
Translates to: HNLTVWQKQSSF*PISAVDISLPH
Trigger: GTGAGGAAGGCTAATGTCAACAGCTGAGATAGGCCAAAAGCTAGACTGCTTCTGCCAAACAGTCAAGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CAA 90 bp TTTTTACTACAGAATGTGAAACGACCTTCCTGGTGGTCCAGTCTCTTCAATGGGTTCAGTGAGTCTTTGTaGCTGGAAGACAGTCTTGCC +
Preference number: 3 (lower is better)
Translates to: FLLQNVKRPSWWSSLFNGFSESL*LEDSLA
Trigger: GGCAAGACTGTCTTCCAGCAACAAAGACTCACTGAA...CCCATTGAAGAGACTGGACCACCAGGAAGGTCGTTTCACATTCTGTAGTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR TCA 72 bp CCCCACGATGCAGATACAGCCACTGTTGTTCAAGCCTaGAAGGGACCAATGCAAAGGTTAAGTATTTCCATT +
Preference number: 3 (lower is better)
Translates to: PHDADTATVVQA*KGPMQRLSISI
Trigger: AATGGAAATACTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCATCGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
3UTR TCA 72 bp TGGAGCAAATCTAAGGTAGATTCTTCAGTCTACTGCTaGTCACTGACACGGAATGAGGAACCAGAAGTGGGT +
Preference number: 3 (lower is better)
Translates to: WSKSKVDSSVYC*SLTRNEEPEVG
Trigger: ACCCACTTCTGGTTCCTCATTCCGTGTCAGTGATCAGCAGTAGACTGAAGAATCTACCTTAGATTTGCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CCA 72 bp TCTGTGGTTGGTCATTTTTCCTGGCTTCTGCCTATGTaGCATCCCAGCTTAGCTCCTCTTAGACATTTTGTA +
Preference number: 3 (lower is better)
Translates to: SVVGHFSWLLPM*HPSLAPLRHFV
Trigger: TACAAAATGTCTAAGAGGAGCTAAGCTGGGATGCCACATAGGCAGAAGCCAGGAAAAATGACCAACCACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CCA 72 bp ACATATATAACCAACTCCCACCGAGCAGGTACACCCTaGCTGAAGACAGAAGACCCTACCAAAATGATTGTA +
Preference number: 3 (lower is better)
Translates to: TYITNSHRAGTP*LKTEDPTKMIV
Trigger: TACAATCATTTTGGTAGGGTCTTCTGTCTTCAGCCAGGGTGTACCTGCTCGGTGGGAGTTGGTTATATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CCA 72 bp CTCAGCCTTCATACAATGGCAGTTATGGCCTTGCTCTaGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGG +
Preference number: 3 (lower is better)
Translates to: LSLHTMAVMALL*IRFWLKGICGW
Trigger: CCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCAAGGCCATAACTGCCATTGTATGAAGGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CAA 90 bp GAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATATACAGATACAGCCACTGTaGTTCAAGCCTGAAAGGGAC +
Preference number: 3 (lower is better)
Translates to: ESKTCISQKPLQLGHTYIQIQPL*FKPERD
Trigger: GTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTG...TATATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR TCA 72 bp AACCTTAAAACACTGGCACTGTTTAGTGGAAGTGACTaGGAATACGGTGGTGAAGAATCAGATACGGCAAGG +
Preference number: 3 (lower is better)
Translates to: NLKTLALFSGSD*EYGGEESDTAR
Trigger: CCTTGCCGTATCTGATTCTTCACCACCGTATTCTCAGTCACTTCCACTAAACAGTGCCAGTGTTTTAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR GCA 72 bp CTTCTCTCAGCCTTCATACAATGGCAGTTATGGCCTTaGTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTG +
Preference number: 3 (lower is better)
Translates to: LLSAFIQWQLWP*SGLGFGLREFV
Trigger: CACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCAAGGCCATAACTGCCATTGTATGAAGGCTGAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CCA 72 bp TTAGAAACAAACATCTGTTTTACAACAAGAAATAGGTaGCAAAGGTGGAGGGTGCTGGACGATTGGCAGGCA +
Preference number: 3 (lower is better)
Translates to: LETNICFTTRNR*QRWRVLDDWQA
Trigger: TGCCTGCCAATCGTCCAGCACCCTCCACCTTTGCCACCTATTTCTTGTTGTAAAACAGATGTTTGTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CCA 72 bp ACAATGGCAGTTATGGCCTTGCTCTGGATTAGGTTTTaGCTTAAGGGAATTTGTGGTTGGTTTGATCCAGAC +
Preference number: 3 (lower is better)
Translates to: TMAVMALLWIRF*LKGICGWFDPD
Trigger: GTCTGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCAAGGCCATAACTGCCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CAA 90 bp TATGTTTCTCCCAGGCTGCTTATCTCTAATCATAATGGCCTAATACAGGGATATCAGATACAGCCACTGTaGTTCAAGCCTGAAAGGGAC +
Preference number: 3 (lower is better)
Translates to: YVSPRLLISNHNGLIQGYQIQPL*FKPERD
Trigger: GTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTG...ATATCCCTGTATTAGGCCATTATGATTAGAGATAAGCAGCCTGGGAGAAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
3UTR GCA 72 bp CAGCCTGGTAATATGCTTTCTCCTGATCATTTTTGGTaGAGGAACAGAGAAGGCAAAGAACTGCATTTAGTC +
Preference number: 3 (lower is better)
Translates to: QPGNMLSPDHFW*RNREGKELHLV
Trigger: GACTAAATGCAGTTCTTTGCCTTCTCTGTTCCTGCACCAAAAATGATCAGGAGAAAGCATATTACCAGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CAA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCGGTTTTCAAGTTACTTaGTACAGAACAACCACTATG +
Preference number: 3 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVGFQVT*YRTTTM
Trigger: CATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR GCA 72 bp ACACACACATCAACTAAGCTCACTGTCTTAGATGGATaGAGTCTGTGGCACCCCAAAACAATTACAATAGAA +
Preference number: 3 (lower is better)
Translates to: THTSTKLTVLDG*SLWHPKTITIE
Trigger: TTCTATTGTAATTGTTTTGGGGTGCCACAGACTGCATCCATCTAAGACAGTGAGCTTAGTTGATGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR GCA 72 bp GGTCTCAACAGTGGGCTTAAAATATTCAGTAATCCATaGTGTAAACAGATGTGCTGTCATCCAGGCTTTGAT +
Preference number: 3 (lower is better)
Translates to: GLNSGLKIFSNP*CKQMCCHPGFD
Trigger: ATCAAAGCCTGGATGACAGCACATCTGTTTACAGCATGGATTACTGAATATTTTAAGCCCACTGTTGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CAA 90 bp TGGTCTAATTTCAATACTGTTGTGTCTGAGAGAATAGTGAGGTCTGAGGAGAGGGTGGGCATTTTCTGTTaGAAGCATATCTCTCAAAGT +
Preference number: 3 (lower is better)
Translates to: WSNFNTVVSERIVRSEERVGIFC*KHISQS
Trigger: ACTTTGAGAGATATGCTTCAAACAGAAAATGCCCAC...CCTCTCCTCAGACCTCACTATTCTCTCAGACACAACAGTATTGAAATTAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CAA 90 bp AGTGGGCTTAAAATATTCAGTAATCCATGCTGTAAACAGATGTGCTGTCATCCACTAGATCTGGATAAATaGCTACAGCTTCTACACCAG +
Preference number: 3 (lower is better)
Translates to: SGLKIFSNPCCKQMCCHPLDLDK*LQLLHQ
Trigger: CTGGTGTAGAAGCTGTAGCAATTTATCCAGATCTAG...TGGATGACAGCACATCTGTTTACAGCATGGATTACTGAATATTTTAAGCCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR GCA 72 bp TGGATAAATTGCTACAGCTTCTACACCAGCACTTGCTaGTTCACCTTGCACTTTTATGATAAGATGACTTCT +
Preference number: 3 (lower is better)
Translates to: WINCYSFYTSTC*FTLHFYDKMTS
Trigger: AGAAGTCATCTTATCATAAAAGTGCAAGGTGAAGCAGCAAGTGCTGGTGTAGAAGCTGTAGCAATTTATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR GCA 72 bp ATCTGGATAAATTGCTACAGCTTCTACACCAGCACTTaGTGCTTCACCTTGCACTTTTATGATAAGATGACT +
Preference number: 3 (lower is better)
Translates to: IWINCYSFYTST*CFTLHFYDKMT
Trigger: AGTCATCTTATCATAAAAGTGCAAGGTGAAGCAGCAAGTGCTGGTGTAGAAGCTGTAGCAATTTATCCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CCA 72 bp CAGGGATTAACTTCTCTTCTCCATGAAAGTCCTAGATaGTTTCTTCTTCCAAAAGAAGGCTGTTTGGAATAC +
Preference number: 3 (lower is better)
Translates to: QGLTSLLHESPR*FLLPKEGCLEY
Trigger: GTATTCCAAACAGCCTTCTTTTGGAAGAAGAAACCATCTAGGACTTTCATGGAGAAGAGAAGTTAATCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CAA 90 bp CCCACTAAACAATCTCCATTAATCTCTACAGTCCATTGTTGGAAGCTTATTCCACTAAGTCTAGTTATCTaGCTATTTCCACCACATCTG +
Preference number: 3 (lower is better)
Translates to: PTKQSPLISTVHCWKLIPLSLVI*LFPPHL
Trigger: CAGATGTGGTGGAAATAGCAAGATAACTAGACTTAG...TGGAATAAGCTTCCAACAATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR-3UTR CAA 90 bp AGTGGGCTTAAAATATTCAGTAATCCATGCTGTAAACAGATGTGCTGTCATCCAAAATACAGGCATATCTaGGAGATATTGCAGGTTTGC +
Preference number: 3 (lower is better)
Translates to: SGLKIFSNPCCKQMCCHPKYRHI*EILQVC
Trigger: GCAAACCTGCAATATCTCCAAGATATGCCTGTATTT...TGGATGACAGCACATCTGTTTACAGCATGGATTACTGAATATTTTAAGCCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR TCA 72 bp TTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTaGCCAGACACATTATCAACGAGCAGTAATATTTGG +
Preference number: 3 (lower is better)
Translates to: LISLYISIRTLG*PDTLSTSSNIW
Trigger: CCAAATATTACTGCTCGTTGATAATGTGTCTGGTCACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR-3UTR CAA 90 bp AGTGGGCTTAAAATATTCAGTAATCCATGCTGTAAACAGATGTGCTGTCATCCAAGCCAAAATCAGAATTaGTGCAAGAGAGAAAACTCT +
Preference number: 3 (lower is better)
Translates to: SGLKIFSNPCCKQMCCHPSQNQN*CKRENS
Trigger: AGAGTTTTCTCTCTTGCACAAATTCTGATTTTGGCT...TGGATGACAGCACATCTGTTTACAGCATGGATTACTGAATATTTTAAGCCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR TCA 72 bp GTTTCTTCTTCCAAAAGAAGGCTGTTTGGAATACACTaGAAATCTCGTGGTGTAGCAACTTCATCAATTAAC +
Preference number: 3 (lower is better)
Translates to: VSSSKRRLFGIH*KSRGVATSSIN
Trigger: GTTAATTGATGAAGTTGCTACACCACGAGATTTTCAGTGTATTCCAAACAGCCTTCTTTTGGAAGAAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR TCA 72 bp GGATTTAGCATAATTCTTATGGGCCCTAGGATTTTCTaGATGGTAAATGAGCATTGGCTTCAACTTAAAGTT +
Preference number: 3 (lower is better)
Translates to: GFSIILMGPRIF*MVNEHWLQLKV
Trigger: AACTTTAAGTTGAAGCCAATGCTCATTTACCATTCAGAAAATCCTAGGGCCCATAAGAATTATGCTAAATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR GCA 72 bp TCTTTTTCACAGATGTATGAGATTCTCAAAGATCTGTaGCAAGGGCAACATAACTTCAACTGTATTAATACC +
Preference number: 3 (lower is better)
Translates to: SFSQMYEILKDL*QGQHNFNCINT
Trigger: GGTATTAATACAGTTGAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAATCTCATACATCTGTGAAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
3UTR CCA 72 bp AAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATaGCAGCCACAGCCTTACAAAATGTATTCCTTAAAT +
Preference number: 3 (lower is better)
Translates to: KVFKLLCTEQPL*QPQPYKMYSLN
Trigger: ATTTAAGGAATACATTTTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp GGCGAAACGAGGTGGCCACAGCCCTTCCGAACTCAAGTTGGCTCCATATGTTCTAGGATCAGGCCTCGGTaGCAAAGGGCTGGACACGGG +
Preference number: 4 (lower is better)
Translates to: GETRWPQPFRTQVGSICSRIRPR*QRAGHG
Trigger: CCCGTGTCCAGCCCTTTGCCACCGAGGCCTGATCCT...AGAACATATGGAGCCAACTTGAGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAATGCCCACGGTCCGGGTaGAGGAGGGGCGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GFQVTLYRTTTMAATALQCPRSG*RRGGPP
Trigger: TGGCGGCCCGCCCCTCCTTCACCCGGACCGTGGGCA...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp TTGGCAGGCAGCACTTGGGACTGGATTCCTGGGATGAGACAGAATGAGAGCAGTGGGACTGACCAGGGATaGCCCAAGGACCTTGACTGG +
Preference number: 4 (lower is better)
Translates to: LAGSTWDWIPGMRQNESSGTDQG*PKDLDW
Trigger: CCAGTCAAGGTCCTTGGGCCATCCCTGGTCAGTCCC...ACTGCTCTCATTCTGTCTCATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp GGCGAAACGAGGTGGCCACAGCCCTTCCGAACTCAAGTTGGCTCCATATGTTCTGGCTCCCCGAAGTGCTaGGATTCTAGGTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GETRWPQPFRTQVGSICSGSPKC*DSRCQP
Trigger: TGGCTGACACCTAGAATCCCAGCACTTCGGGGAGCC...AGAACATATGGAGCCAACTTGAGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAATCTCGGTCGCCCCGTaGCCAGACCCGCCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: RFSSYFVQNNHYGSHSLTISVAP*PDPPRL
Trigger: AAGGCGGGGCGGGTCTGGCCACGGGGCGACCGAGAT...TGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310898.5
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGATCTCGGTCGCCCCGTaGCCAGACCCGCCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKISVAP*PDPPRL
Trigger: AAGGCGGGGCGGGTCTGGCCACGGGGCGACCGAGAT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403205.6
CDS-3UTR CCA 90 bp ACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCATAGGATCAGGCCTCGGTaGCAAAGGGCTGGACACGGG +
Preference number: 4 (lower is better)
Translates to: TPPSHGPTKQSPLISTVHRIRPR*QRAGHG
Trigger: CCCGTGTCCAGCCCTTTGCCACCGAGGCCTGATCCT...ATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp GGCGAAACGAGGTGGCCACAGCCCTTCCGAACTCAAGTTGGCTCCATATGTTCTATCCTCAAAGGTCACTaGCTCCTGAGGCCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: GETRWPQPFRTQVGSICSILKGH*LLRPSC
Trigger: ACAACTTGGCCTCAGGAGTCAGTGACCTTTGAGGAT...AGAACATATGGAGCCAACTTGAGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp TGCAGATACAGCCACTGTTGTTCAAGCCTGAAAGGGACCAATGCAAAGGTTAAGAGGAGCACTGGGGACTaGCCAGGGATGGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: CRYSHCCSSLKGTNAKVKRSTGD*PGMAQG
Trigger: TCCTTGGGCCATCCCTGGTCAGTCCCCAGTGCTCCT...CTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp TGCAGATACAGCCACTGTTGTTCAAGCCTGAAAGGGACCAATGCAAAGGTTAAGGGCACCGGGCGGACCTaGCACGTAGAACTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: CRYSHCCSSLKGTNAKVKGTGRT*HVELAE
Trigger: TTCAGCGAGTTCTACGTGCCAGGTCCGCCCGGTGCC...CTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp GGCGAAACGAGGTGGCCACAGCCCTTCCGAACTCAAGTTGGCTCCATATGTTCTAAGGTGAAAAGTAGATaGGCGAAACGAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GETRWPQPFRTQVGSICSKVKSR*AKRGGH
Trigger: GTGGCCACCTCGTTTCGCCCATCTACTTTTCACCTT...AGAACATATGGAGCCAACTTGAGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp GGCGAAACGAGGTGGCCACAGCCCTTCCGAACTCAAGTTGGCTCCATATGTTCTCTGCTGAGTTTCCACTaGAACCACTTGGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GETRWPQPFRTQVGSICSLLSFH*NHLVLW
Trigger: CCACAGAACCAAGTGGTTCCAGTGGAAACTCAGCAG...AGAACATATGGAGCCAACTTGAGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CAA 72 bp AGGCACCAGCAGCTGCTGAGTTTCCACTGGAACCACTaGGTTCTGTGGTTGGTCATTTTTCCTGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RHQQLLSFHWNH*VLWLVIFPGFC
Trigger: GCAGAAGCCAGGAAAAATGACCAACCACAGAACCAAGTGGTTCCAGTGGAAACTCAGCAGCTGCTGGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCCGAGCAGCCACCTTaGCGGCTTCGGCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: FLSERFICSMCCCWIAFYPEQPP*RLRRGP
Trigger: TGGGCCTCGCCGAAGCCGTCAAGGTGGCTGCTCGGG...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp ATTCTCAAAGATCTGTGCCAAGGGCAACATAACTTCAACTGTATTAATACCCCACCCGAGCAGCCACCTTaGCGGCTTCGGCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ILKDLCQGQHNFNCINTPPEQPP*RLRRGP
Trigger: TGGGCCTCGCCGAAGCCGTCAAGGTGGCTGCTCGGG...TGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp TTGGCAGGCAGCACTTGGGACTGGATTCCTGGGATGAGACAGAATGAGAGCAGTTCTACTGCTGATCACTaGCACGGAATGAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: LAGSTWDWIPGMRQNESSSTADH*HGMRNQ
Trigger: CTGGTTCCTCATTCCGTGTCAGTGATCAGCAGTAGA...ACTGCTCTCATTCTGTCTCATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp AGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAGCCGGAAGGGCGAGTaGACGCCCAGGGTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: RFSSYFVQNNHYGSHSLTSRKGE*TPRVPL
Trigger: TAGAGGGACCCTGGGCGTGCACTCGCCCTTCCGGCT...TGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310898.5
CDS-3UTR GCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGAGCCGGAAGGGCGAGTaGACGCCCAGGGTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKSRKGE*TPRVPL
Trigger: TAGAGGGACCCTGGGCGTGCACTCGCCCTTCCGGCT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp GGCGAAACGAGGTGGCCACAGCCCTTCCGAACTCAAGTTGGCTCCATATGTTCTACAACAAGAAATAGGTaGCAAAGGTGGAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GETRWPQPFRTQVGSICSTTRNR*QRWRVL
Trigger: CAGCACCCTCCACCTTTGCCACCTATTTCTTGTTGT...AGAACATATGGAGCCAACTTGAGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp AGCAGACATAAAAACATTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTGCCCGAGCAGCCACCTTaGCGGCTTCGGCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SRHKNINLFVHLHQNSWVPEQPP*RLRRGP
Trigger: TGGGCCTCGCCGAAGCCGTCAAGGTGGCTGCTCGGG...CACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp ACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCATCCCGTGTGTAATCTCTaGTGCTGCAGGTATGCCGCA +
Preference number: 4 (lower is better)
Translates to: TPPSHGPTKQSPLISTVHPVCNL*CCRYAA
Trigger: TGCGGCATACCTGCAGCATCAGAGATTACACACGGG...ATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGAGGAGCACTGGGGACTaGCCAGGGATGGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKRSTGD*PGMAQG
Trigger: TCCTTGGGCCATCCCTGGTCAGTCCCCAGTGCTCCT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR TCA 90 bp TGCAGATACAGCCACTGTTGTTCAAGCCTGAAAGGGACCAATGCAAAGGTTAAGAGGCACAGCTACGGCTaGAGCAGAACAGGATCCCTG +
Preference number: 4 (lower is better)
Translates to: CRYSHCCSSLKGTNAKVKRHSYG*SRTGSL
Trigger: CAGGGATCCTGTTCTGCTTCAGCCGTAGCTGTGCCT...CTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR GCA 90 bp TGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAGACCCTGAAACCCACGCTCTaGAGAACGCCGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CSGLGFGLREFVVGLIQTLKPTL*RTPRSW
Trigger: CCAGCTCCTCGGCGTTCTGCAGAGCGTGGGTTTCAG...GGTCTGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp TGCAGATACAGCCACTGTTGTTCAAGCCTGAAAGGGACCAATGCAAAGGTTAAGCCAGGAGGGGGAGGTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: CRYSHCCSSLKGTNAKVKPGGGG*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAACCTCCCCCTCCTGG...CTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGGCTGGAGAGGAGCACTaGGGACTGACCAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKAGEEH*GLTRDG
Trigger: GCCATCCCTGGTCAGTCCCCAGTGCTCCTCTCCAGC...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR TCA 90 bp TGCAGATACAGCCACTGTTGTTCAAGCCTGAAAGGGACCAATGCAAAGGTTAAGCCCGTGTGTAATCTCTaGTGCTGCAGGTATGCCGCA +
Preference number: 4 (lower is better)
Translates to: CRYSHCCSSLKGTNAKVKPVCNL*CCRYAA
Trigger: TGCGGCATACCTGCAGCATCAGAGATTACACACGGG...CTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR GCA 90 bp CCCACTAAACAATCTCCATTAATCTCTACAGTCCATTGTTGGAAGCTTATTCCAAGCCGGAAGGGCGAGTaGACGCCCAGGGTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: PTKQSPLISTVHCWKLIPSRKGE*TPRVPL
Trigger: TAGAGGGACCCTGGGCGTGCACTCGCCCTTCCGGCT...TGGAATAAGCTTCCAACAATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431278.5
CDS-3UTR GCA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCTGATGCTGCAGGTATaGCGCACTCCTACGGAAAGC +
Preference number: 4 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVLMLQV*RTPTES
Trigger: GCTTTCCGTAGGAGTGCGGCATACCTGCAGCATCAG...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp TTGGCAGGCAGCACTTGGGACTGGATTCCTGGGATGAGACAGAATGAGAGCAGTACTGTCTTCTGGGTTTaGACAAGCAAGATCCTCAAG +
Preference number: 4 (lower is better)
Translates to: LAGSTWDWIPGMRQNESSTVFWV*TSKILK
Trigger: CTTGAGGATCTTGCTTGTCCAAACCCAGAAGACAGT...ACTGCTCTCATTCTGTCTCATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGGGGACTGACCAGGGATaGCCCAAGGACCTTGACTGG +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKGTDQG*PKDLDW
Trigger: CCAGTCAAGGTCCTTGGGCCATCCCTGGTCAGTCCC...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCGAAGAACAGGAGGTATaGCTGGAGAGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVEEQEV*LERSTG
Trigger: CCCAGTGCTCCTCTCCAGCCATACCTCCTGTTCTTC...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCTGTTTGAGACCAGCCTaGCCAAGATGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVCLRPA*PRWRNP
Trigger: GGGGTTTCGCCATCTTGGCCAGGCTGGTCTCAAACA...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp CAAGGGCAACATAACTTCAACTGTATTAATACCCCACCTAGCCATGGGCCCACTAATAGGTGGCAAAGGTaGAGGGTGCTGGACGATTGG +
Preference number: 4 (lower is better)
Translates to: QGQHNFNCINTPPSHGPTNRWQR*RVLDDW
Trigger: CCAATCGTCCAGCACCCTCCACCTTTGCCACCTATT...AGTGGGCCCATGGCTAGGTGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CAA 72 bp TCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTaGAACCCCTCAAGATCATCCATCAGGGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: STTSAVTSSTEV*NPSRSSIRVEV
Trigger: GACCTCAACCCTGATGGATGATCTTGAGGGGTTCAAGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR CAA 72 bp CTGCTGAGTTTCCACTGGAACCACTTGGTTCTGTGGTaGGTCATTTTTCCTGGCTTCTGCCTATGTGGCATC +
Preference number: 4 (lower is better)
Translates to: LLSFHWNHLVLW*VIFPGFCLCGI
Trigger: GATGCCACATAGGCAGAAGCCAGGAAAAATGACCAACCACAGAACCAAGTGGTTCCAGTGGAAACTCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCAGGACTCACCACCTTaGCTGATGCCTCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVQDSPP*LMPLRI
Trigger: GATTCTGAGAGGCATCAGTCAAGGTGGTGAGTCCTG...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp TATGTTTCTCCCAGGCTGCTTATCTCTAATCATAATGGCCTAATACAGGGATATAGGAGCACTGGGGACTaGCCAGGGATGGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: YVSPRLLISNHNGLIQGYRSTGD*PGMAQG
Trigger: TCCTTGGGCCATCCCTGGTCAGTCCCCAGTGCTCCT...ATATCCCTGTATTAGGCCATTATGATTAGAGATAAGCAGCCTGGGAGAAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp AGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAGGCACAGCTACGGCTaGAGCAGAACAGGATCCCTG +
Preference number: 4 (lower is better)
Translates to: RFSSYFVQNNHYGSHSLTRHSYG*SRTGSL
Trigger: CAGGGATCCTGTTCTGCTTCAGCCGTAGCTGTGCCT...TGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGAGGCACAGCTACGGCTaGAGCAGAACAGGATCCCTG +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKRHSYG*SRTGSL
Trigger: CAGGGATCCTGTTCTGCTTCAGCCGTAGCTGTGCCT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR TCA 90 bp TTGGCAGGCAGCACTTGGGACTGGATTCCTGGGATGAGACAGAATGAGAGCAGTTTTAGTGGAAGTGACTaGGAATACGGTGGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LAGSTWDWIPGMRQNESSFSGSD*EYGGEE
Trigger: TTCTTCACCACCGTATTCTCAGTCACTTCCACTAAA...ACTGCTCTCATTCTGTCTCATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGCCAGGAGGGGGAGGTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKPGGGG*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAACCTCCCCCTCCTGG...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp GGCGAAACGAGGTGGCCACAGCCCTTCCGAACTCAAGTTGGCTCCATATGTTCTGGCCCTTCTCCAATGTaGTTTTTCTCATGTACAATA +
Preference number: 4 (lower is better)
Translates to: GETRWPQPFRTQVGSICSGPSPM*FFSCTI
Trigger: TATTGTACATGAGAAAAACCACATTGGAGAAGGGCC...AGAACATATGGAGCCAACTTGAGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACAGGGACTGACCAGGGATaGCCCAAGGACCTTGACTGG +
Preference number: 4 (lower is better)
Translates to: NLYSPLLEAYSNSLPVATGTDQG*PKDLDW
Trigger: CCAGTCAAGGTCCTTGGGCCATCCCTGGTCAGTCCC...TGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp TATGTTTCTCCCAGGCTGCTTATCTCTAATCATAATGGCCTAATACAGGGATATGCTGGAGAGGAGCACTaGGGACTGACCAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: YVSPRLLISNHNGLIQGYAGEEH*GLTRDG
Trigger: GCCATCCCTGGTCAGTCCCCAGTGCTCCTCTCCAGC...ATATCCCTGTATTAGGCCATTATGATTAGAGATAAGCAGCCTGGGAGAAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp ACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCATAGGGGTGAGAATAACTaGGGAAGGTTTCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: TPPSHGPTKQSPLISTVHRGENN*GRFHSG
Trigger: CCCACTGTGAAACCTTCCCCAGTTATTCTCACCCCT...ATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp CAGAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATAGGCGCAGCCACTTTCTaGAGCTTGCTGTTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: QNPKPVFPRSPCNLDIHIGAATF*SLLFSR
Trigger: GCGAGAGAACAGCAAGCTCCAGAAAGTGGCTGCGCC...TATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGGCACGTAGAACTCGCTaGAACCCACGCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKARRTR*NPRSAE
Trigger: TTCTGCAGAGCGTGGGTTTCAGCGAGTTCTACGTGC...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGCCCGTGTGTAATCTCTaGTGCTGCAGGTATGCCGCA +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKPVCNL*CCRYAA
Trigger: TGCGGCATACCTGCAGCATCAGAGATTACACACGGG...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGATGGCCCAAGGACCTTaGCTGGCTTCTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKMAQGP*LASSPQ
Trigger: CTGTGGAGAAGAAGCCAGTCAAGGTCCTTGGGCCAT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR TCA 90 bp ACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCATACTGTTGTTCAAGCCTaGAAGGGACCAATGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TPPSHGPTKQSPLISTVHTVVQA*KGPMQR
Trigger: CCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGT...ATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp TGGTCTAATTTCAATACTGTTGTGTCTGAGAGAATAGTGAGGTCTGAGGAGAGGAACCTACCTAGCCACTaGCCCACTACACAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: WSNFNTVVSERIVRSEERNLPSH*PTTQLP
Trigger: AGGGAGCTGTGTAGTGGGTCAGTGGCTAGGTAGGTT...CCTCTCCTCAGACCTCACTATTCTCTCAGACACAACAGTATTGAAATTAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp GGCGAAACGAGGTGGCCACAGCCCTTCCGAACTCAAGTTGGCTCCATATGTTCTTGGGCATTTTCTGTTTaGAGCATATCTCTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: GETRWPQPFRTQVGSICSWAFSV*SISLKV
Trigger: TACTTTGAGAGATATGCTTCAAACAGAAAATGCCCA...AGAACATATGGAGCCAACTTGAGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCTGAAACCCACGCTCTaGAGAACGCCGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FLSERFICSMCCCWIAFYLKPTL*RTPRSW
Trigger: CCAGCTCCTCGGCGTTCTGCAGAGCGTGGGTTTCAG...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR GCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGCTGATGCTGCAGGTATaGCGCACTCCTACGGAAAGC +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKLMLQV*RTPTES
Trigger: GCTTTCCGTAGGAGTGCGGCATACCTGCAGCATCAG...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR GCA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTGGCAAAGGTGGAGGGTaGTGGACGATTGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVGKGGG*WTIGRQ
Trigger: CTGCCTGCCAATCGTCCAGCACCCTCCACCTTTGCC...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AGCAGACATAAAAACATTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTGAGGATCAGGCCTCGGTaGCAAAGGGCTGGACACGGG +
Preference number: 4 (lower is better)
Translates to: SRHKNINLFVHLHQNSWVRIRPR*QRAGHG
Trigger: CCCGTGTCCAGCCCTTTGCCACCGAGGCCTGATCCT...CACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAACCCAAGGACCTTGACTaGCTTCTTCTCCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: GFQVTLYRTTTMAATALQPKDLD*LLLHRV
Trigger: CACCCTGTGGAGAAGAAGCCAGTCAAGGTCCTTGGG...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGCCCAAGGACCTTGACTaGCTTCTTCTCCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKPKDLD*LLLHRV
Trigger: CACCCTGTGGAGAAGAAGCCAGTCAAGGTCCTTGGG...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGGAAGAACAGGAGGTATaGCTGGAGAGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKEEQEV*LERSTG
Trigger: CCCAGTGCTCCTCTCCAGCCATACCTCCTGTTCTTC...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCAGGGGTGAGAATAACTaGGGAAGGTTTCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVRGENN*GRFHSG
Trigger: CCCACTGTGAAACCTTCCCCAGTTATTCTCACCCCT...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGTGTTTGAGACCAGCCTaGCCAAGATGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKCLRPA*PRWRNP
Trigger: GGGGTTTCGCCATCTTGGCCAGGCTGGTCTCAAACA...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp TGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAGACCTGGCTTCTGCCTATGTaGCATCCCAGCTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: CSGLGFGLREFVVGLIQTWLLPM*HPSLAP
Trigger: AGGAGCTAAGCTGGGATGCCACATAGGCAGAAGCCA...GGTCTGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp GAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATATAGCACGTAGAACTCGCTaGAACCCACGCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ESKTCISQKPLQLGHTYIARRTR*NPRSAE
Trigger: TTCTGCAGAGCGTGGGTTTCAGCGAGTTCTACGTGC...TATATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGAAGGTCACTGACTCCTaGGGCCAAGTTGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKKVTDS*GQVVWS
Trigger: GCTCCAAACAACTTGGCCTCAGGAGTCAGTGACCTT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000403205.6
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGACTCACCACCTTGACTaGTGCCTCTCAGAATCTCGG +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKTHHLD*CLSESR
Trigger: CCGAGATTCTGAGAGGCATCAGTCAAGGTGGTGAGT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGCAGGACTCACCACCTTaGCTGATGCCTCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKQDSPP*LMPLRI
Trigger: GATTCTGAGAGGCATCAGTCAAGGTGGTGAGTCCTG...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGGCTGAGAAACGTTCCTaGGAAGTCCTCCTACTGGCA +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKAEKRS*EVLLLA
Trigger: TGCCAGTAGGAGGACTTCTCAGGAACGTTTCTCAGC...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR TCA 90 bp ACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCATAACTTCCATACCATTTaGAGGCTTTCCCACACACCT +
Preference number: 4 (lower is better)
Translates to: TPPSHGPTKQSPLISTVHNFHTI*RLSHTP
Trigger: AGGTGTGTGGGAAAGCCTTCAAATGGTATGGAAGTT...ATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp AATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACAATGGCCCAAGGACCTTaGCTGGCTTCTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: NLYSPLLEAYSNSLPVATMAQGP*LASSPQ
Trigger: CTGTGGAGAAGAAGCCAGTCAAGGTCCTTGGGCCAT...TGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp TGCAGATACAGCCACTGTTGTTCAAGCCTGAAAGGGACCAATGCAAAGGTTAAGACTGTTGTTCAAGCCTaGAAGGGACCAATGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CRYSHCCSSLKGTNAKVKTVVQA*KGPMQR
Trigger: CCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGT...CTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp TGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAGACCGCTGAGCATGAGAACTaGGAGGGATGCTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: CSGLGFGLREFVVGLIQTAEHEN*EGCFGS
Trigger: ACTTCCAAAGCATCCCTCTCAGTTCTCATGCTCAGC...GGTCTGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp CCCACTAAACAATCTCCATTAATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTAGCACGGGGCTaGAGGCGCAGCCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: PTKQSPLISTVHCWKLIPILARG*RRSHFL
Trigger: CAGAAAGTGGCTGCGCCTTCAGCCCCGTGCTAGAAT...TGGAATAAGCTTCCAACAATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp CAAGGGCAACATAACTTCAACTGTATTAATACCCCACCTAGCCATGGGCCCACTGACTTCTTCATACTATaGCTCTCTTCCCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: QGQHNFNCINTPPSHGPTDFFIL*LSSQAE
Trigger: TTCTGCCTGGGAAGAGAGTCATAGTATGAAGAAGTC...AGTGGGCCCATGGCTAGGTGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACGGTGGGTGGATCACTTaGGGCTGCCAGGAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: FLSERFICSMCCCWIAFYGGWIT*GCQEFK
Trigger: CTTGAACTCCTGGCAGCCTCAAGTGATCCACCCACC...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCGCTCACTGCAACCTCTaGCTCTGGATTCAAGCAATT +
Preference number: 4 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVAHCNL*LWIQAI
Trigger: AATTGCTTGAATCCAGAGGCAGAGGTTGCAGTGAGC...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp CTAGTTATCTTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTGCAACCTCAGCTCACTaGAACCTCTGCCTCTGGATT +
Preference number: 4 (lower is better)
Translates to: LVILLFPPHLQLLRPLKSATSAH*NLCLWI
Trigger: AATCCAGAGGCAGAGGTTGCAGTGAGCTGAGGTTGC...AGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAGATAACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR GCA 90 bp AGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAGCTGAAGCACAGTGGTaGAACCTCAGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: RFSSYFVQNNHYGSHSLTAEAQW*NLSSLQ
Trigger: TTGCAGTGAGCTGAGGTTGCACCACTGTGCTTCAGC...TGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR GCA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCATTTTTCCTGGCTTCTaGCTATGTGGCATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVIFPGF*LCGIPA
Trigger: AGCTGGGATGCCACATAGGCAGAAGCCAGGAAAAAT...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAGAACGCCGAGGAGCTaGTCACTAACTAAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: RFSSYFVQNNHYGSHSLTRTPRS*SLTKGR
Trigger: TCGGCCTTTAGTTAGTGACCAGCTCCTCGGCGTTCT...TGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGAGAACGCCGAGGAGCTaGTCACTAACTAAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKRTPRS*SLTKGR
Trigger: TCGGCCTTTAGTTAGTGACCAGCTCCTCGGCGTTCT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCAGGCACCGGGCGGACCTaGCACGTAGAACTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPGTGRT*HVELAE
Trigger: TTCAGCGAGTTCTACGTGCCAGGTCCGCCCGGTGCC...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp TCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCAGCAGGTTTGGGGAATaGAAACGCTACCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SRRFSSYFVQNNHYGSHSSRFGE*KRYQRS
Trigger: GCTTCTCTGGTAGCGTTTCCATTCCCCAAACCTGCT...GCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCGAGAAGTCCTCCTACTaGCATTCTGTGCAACTCTGT +
Preference number: 4 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVEKSSY*HSVQLC
Trigger: ACAGAGTTGCACAGAATGCCAGTAGGAGGACTTCTC...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTCAGGCTGAAGCACAGTaGTGCAACCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: FICSMCCCWIAFYPQWNIQAEAQ*CNLSSL
Trigger: CAGTGAGCTGAGGTTGCACCACTGTGCTTCAGCCTG...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCAGCTGGAGAGGAGCACTaGGGACTGACCAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPAGEEH*GLTRDG
Trigger: GCCATCCCTGGTCAGTCCCCAGTGCTCCTCTCCAGC...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTGAAGAACAGGAGGTATaGCTGGAGAGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: FICSMCCCWIAFYPQWNIEEQEV*LERSTG
Trigger: CCCAGTGCTCCTCTCCAGCCATACCTCCTGTTCTTC...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAGACCGCAGAACAGGATCCCTaGAGAAGAACAGGAGGTATG +
Preference number: 4 (lower is better)
Translates to: CSGLGFGLREFVVGLIQTAEQDP*RRTGGM
Trigger: CATACCTCCTGTTCTTCTCCAGGGATCCTGTTCTGC...GGTCTGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TATGTTTCTCCCAGGCTGCTTATCTCTAATCATAATGGCCTAATACAGGGATATATGGGCGAAACGAGGTaGCCACAGCCCTTCCGAACT +
Preference number: 4 (lower is better)
Translates to: YVSPRLLISNHNGLIQGYMGETR*PQPFRT
Trigger: AGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCCCAT...ATATCCCTGTATTAGGCCATTATGATTAGAGATAAGCAGCCTGGGAGAAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TGCAGATACAGCCACTGTTGTTCAAGCCTGAAAGGGACCAATGCAAAGGTTAAGGTGAAACGACCTTCCTaGTGGTCCAGTCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: CRYSHCCSSLKGTNAKVKVKRPS*WSSLFN
Trigger: ATTGAAGAGACTGGACCACCAGGAAGGTCGTTTCAC...CTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACAGGTCTTGTATGTTTCGGCAGCACTTGGGACTaGATTCCTGGGATGAGACAG +
Preference number: 4 (lower is better)
Translates to: LLEAYSNSLPVATGLVCFGSTWD*IPGMRQ
Trigger: CTGTCTCATCCCAGGAATCCAGTCCCAAGTGCTGCC...GAAACATACAAGACCTGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACGCACGTAGAACTCGCTaGAACCCACGCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FLSERFICSMCCCWIAFYARRTR*NPRSAE
Trigger: TTCTGCAGAGCGTGGGTTTCAGCGAGTTCTACGTGC...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp TATGTTTCTCCCAGGCTGCTTATCTCTAATCATAATGGCCTAATACAGGGATATGCACGTAGAACTCGCTaGAACCCACGCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: YVSPRLLISNHNGLIQGYARRTR*NPRSAE
Trigger: TTCTGCAGAGCGTGGGTTTCAGCGAGTTCTACGTGC...ATATCCCTGTATTAGGCCATTATGATTAGAGATAAGCAGCCTGGGAGAAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTAAGGTCACTGACTCCTaGGGCCAAGTTGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: FICSMCCCWIAFYPQWNIKVTDS*GQVVWS
Trigger: GCTCCAAACAACTTGGCCTCAGGAGTCAGTGACCTT...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp CTAGTTATCTTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTATCCTCAAAGGTCACTaGCTCCTGAGGCCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LVILLFPPHLQLLRPLKSILKGH*LLRPSC
Trigger: ACAACTTGGCCTCAGGAGTCAGTGACCTTTGAGGAT...AGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAGATAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGATCCTCAAAGGTCACTaGCTCCTGAGGCCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKILKGH*LLRPSC
Trigger: ACAACTTGGCCTCAGGAGTCAGTGACCTTTGAGGAT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000403205.6
CDS-3UTR TCA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTACTCACCACCTTGACTaGTGCCTCTCAGAATCTCGG +
Preference number: 4 (lower is better)
Translates to: FICSMCCCWIAFYPQWNITHHLD*CLSESR
Trigger: CCGAGATTCTGAGAGGCATCAGTCAAGGTGGTGAGT...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp TTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAACTCACCACCTTGACTaGTGCCTCTCAGAATCTCGG +
Preference number: 4 (lower is better)
Translates to: FPEGFQVTLYRTTTMAATTHHLD*CLSESR
Trigger: CCGAGATTCTGAGAGGCATCAGTCAAGGTGGTGAGT...TGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp TTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACACAGGACTCACCACCTTaGCTGATGCCTCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: FPEGFQVTLYRTTTMAATQDSPP*LMPLRI
Trigger: GATTCTGAGAGGCATCAGTCAAGGTGGTGAGTCCTG...TGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp TGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAGACCGGCTGCAACATCAACTaGCTCTTCCTTTCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: CSGLGFGLREFVVGLIQTGCNIN*LFLSER
Trigger: TCTTTCGGAAAGGAAGAGTCAGTTGATGTTGCAGCC...GGTCTGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp ATTCTCAAAGATCTGTGCCAAGGGCAACATAACTTCAACTGTATTAATACCCCAATGGCCCAAGGACCTTaGCTGGCTTCTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: ILKDLCQGQHNFNCINTPMAQGP*LASSPQ
Trigger: CTGTGGAGAAGAAGCCAGTCAAGGTCCTTGGGCCAT...TGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp GCCTTGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCATCAGATACGGCAAGGTaGAAAGTAGATGGGCGAAAC +
Preference number: 4 (lower is better)
Translates to: ALLWIRFWLKGICGWFDPSDTAR*KVDGRN
Trigger: GTTTCGCCCATCTACTTTTCACCTTGCCGTATCTGA...TGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp GCCTTGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCATCTTCAGTCTACTGCTaGTCACTGACACGGAATGAG +
Preference number: 4 (lower is better)
Translates to: ALLWIRFWLKGICGWFDPSSVYC*SLTRNE
Trigger: CTCATTCCGTGTCAGTGATCAGCAGTAGACTGAAGA...TGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp TTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGAGAATAGTGAGGTCTaGGGAGAGGGAGAGAGATGG +
Preference number: 4 (lower is better)
Translates to: FPEGFQVTLYRTTTMAATENSEV*GEGERW
Trigger: CCATCTCTCTCCCTCTCCTCAGACCTCACTATTCTC...TGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTGCAACCTCAGCTCACTaGAACCTCTGCCTCTGGATT +
Preference number: 4 (lower is better)
Translates to: FICSMCCCWIAFYPQWNIATSAH*NLCLWI
Trigger: AATCCAGAGGCAGAGGTTGCAGTGAGCTGAGGTTGC...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR GCA 90 bp ATTCTCAAAGATCTGTGCCAAGGGCAACATAACTTCAACTGTATTAATACCCCACTGATGCTGCAGGTATaGCGCACTCCTACGGAAAGC +
Preference number: 4 (lower is better)
Translates to: ILKDLCQGQHNFNCINTPLMLQV*RTPTES
Trigger: GCTTTCCGTAGGAGTGCGGCATACCTGCAGCATCAG...TGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR GCA 90 bp GCCTTGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCACTACTCTGTGTCCTTTaGCTCTCTATACACACACCC +
Preference number: 4 (lower is better)
Translates to: ALLWIRFWLKGICGWFDPLLCVL*LSIHTP
Trigger: GGGTGTGTGTATAGAGAGGCAAAGGACACAGAGTAG...TGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp AGTGGGCTTAAAATATTCAGTAATCCATGCTGTAAACAGATGTGCTGTCATCCACCGGGAGGTGTAGGTTaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: SGLKIFSNPCCKQMCCHPPGGVG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAACCTACACCTCCCGG...TGGATGACAGCACATCTGTTTACAGCATGGATTACTGAATATTTTAAGCCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCTCATGCACTGTCTTCTaGGTTTGGACAAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVSCTVF*VWTSKI
Trigger: GATCTTGCTTGTCCAAACCCAGAAGACAGTGCATGA...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp AGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAGCAGGTTTGGGGAATaGAAACGCTACCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RFSSYFVQNNHYGSHSLTSRFGE*KRYQRS
Trigger: GCTTCTCTGGTAGCGTTTCCATTCCCCAAACCTGCT...TGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGAGCAGGTTTGGGGAATaGAAACGCTACCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKSRFGE*KRYQRS
Trigger: GCTTCTCTGGTAGCGTTTCCATTCCCCAAACCTGCT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000403205.6
CDS-3UTR CCA 90 bp ATTCTCAAAGATCTGTGCCAAGGGCAACATAACTTCAACTGTATTAATACCCCACAGGCTGAAGCACAGTaGTGCAACCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ILKDLCQGQHNFNCINTPQAEAQ*CNLSSL
Trigger: CAGTGAGCTGAGGTTGCACCACTGTGCTTCAGCCTG...TGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TGCAGATACAGCCACTGTTGTTCAAGCCTGAAAGGGACCAATGCAAAGGTTAAGCTCCATCAGAACTCTTaGGTGACCAGACACATTATC +
Preference number: 4 (lower is better)
Translates to: CRYSHCCSSLKGTNAKVKLHQNS*VTRHII
Trigger: GATAATGTGTCTGGTCACCCAAGAGTTCTGATGGAG...CTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp ATTCTCAAAGATCTGTGCCAAGGGCAACATAACTTCAACTGTATTAATACCCCACCCAAGGACCTTGACTaGCTTCTTCTCCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: ILKDLCQGQHNFNCINTPPKDLD*LLLHRV
Trigger: CACCCTGTGGAGAAGAAGCCAGTCAAGGTCCTTGGG...TGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGGCAGAACAGGATCCCTaGAGAAGAACAGGAGGTATG +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKAEQDP*RRTGGM
Trigger: CATACCTCCTGTTCTTCTCCAGGGATCCTGTTCTGC...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGAGGGGTGAGAATAACTaGGGAAGGTTTCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKRGENN*GRFHSG
Trigger: CCCACTGTGAAACCTTCCCCAGTTATTCTCACCCCT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp CCCACTAAACAATCTCCATTAATCTCTACAGTCCATTGTTGGAAGCTTATTCCATGTTTGAGACCAGCCTaGCCAAGATGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: PTKQSPLISTVHCWKLIPCLRPA*PRWRNP
Trigger: GGGGTTTCGCCATCTTGGCCAGGCTGGTCTCAAACA...TGGAATAAGCTTCCAACAATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp TTTTTACTACAGAATGTGAAACGACCTTCCTGGTGGTCCAGTCTCTTCAATGGGTCCATGCTAAAGATCTaGCCATCACCACAGATAGCC +
Preference number: 4 (lower is better)
Translates to: FLLQNVKRPSWWSSLFNGSMLKI*PSPQIA
Trigger: GGCTATCTGTGGTGATGGCCAGATCTTTAGCATGGA...CCCATTGAAGAGACTGGACCACCAGGAAGGTCGTTTCACATTCTGTAGTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp CAAGGGCAACATAACTTCAACTGTATTAATACCCCACCTAGCCATGGGCCCACTCTTCCGAACTCAAGTTaGCTCCATATGTTCTCATTC +
Preference number: 4 (lower is better)
Translates to: QGQHNFNCINTPPSHGPTLPNSS*LHMFSF
Trigger: GAATGAGAACATATGGAGCCAACTTGAGTTCGGAAG...AGTGGGCCCATGGCTAGGTGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp ATTCTCAAAGATCTGTGCCAAGGGCAACATAACTTCAACTGTATTAATACCCCAATTAGCTGGGCGTGGTaGCACACACTACTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ILKDLCQGQHNFNCINTPISWAW*HTLLRR
Trigger: CCTCCTGAGTAGTGTGTGCCACCACGCCCAGCTAAT...TGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CAA 72 bp CTGCATGAACCCCTAACAAGAGAGACGAGCTGTCCTTaGATGCTTTTAAGCCAGGGATTAACTTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LHEPLTRETSCP*MLLSQGLTSLL
Trigger: GAGAAGAGAAGTTAATCCCTGGCTTAAAAGCATCAAAGGACAGCTCGTCTCTCTTGTTAGGGGTTCATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp ATTCTCAAAGATCTGTGCCAAGGGCAACATAACTTCAACTGTATTAATACCCCAACTCACCACCTTGACTaGTGCCTCTCAGAATCTCGG +
Preference number: 4 (lower is better)
Translates to: ILKDLCQGQHNFNCINTPTHHLD*CLSESR
Trigger: CCGAGATTCTGAGAGGCATCAGTCAAGGTGGTGAGT...TGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp CCCACTAAACAATCTCCATTAATCTCTACAGTCCATTGTTGGAAGCTTATTCCACAGGACTCACCACCTTaGCTGATGCCTCTCAGAATC +
Preference number: 4 (lower is better)
Translates to: PTKQSPLISTVHCWKLIPQDSPP*LMPLRI
Trigger: GATTCTGAGAGGCATCAGTCAAGGTGGTGAGTCCTG...TGGAATAAGCTTCCAACAATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGCTAGCCCTTCATTTTTaGTCCAGGACTCACCACCTT +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKLALHF*SRTHHL
Trigger: AAGGTGGTGAGTCCTGGATCAAAAATGAAGGGCTAG...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR TCA 90 bp CCCACTAAACAATCTCCATTAATCTCTACAGTCCATTGTTGGAAGCTTATTCCAGCTGAGAAACGTTCCTaGGAAGTCCTCCTACTGGCA +
Preference number: 4 (lower is better)
Translates to: PTKQSPLISTVHCWKLIPAEKRS*EVLLLA
Trigger: TGCCAGTAGGAGGACTTCTCAGGAACGTTTCTCAGC...TGGAATAAGCTTCCAACAATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp GTAGTTTCCATCTCAAGAAACCACTTTTGTGGCTCTTATATTAGAAGCAACTCCGTCTTGCCTCACTGTTaGTGGCTGCTGAATGATCGG +
Preference number: 4 (lower is better)
Translates to: VVSISRNHFCGSYIRSNSVLPHC*WLLNDR
Trigger: CCGATCATTCAGCAGCCATCAACAGTGAGGCAAGAC...GGAGTTGCTTCTAATATAAGAGCCACAAAAGTGGTTTCTTGAGATGGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp ACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCATAATCTAAGTCTTCAGTaGGTCTTTGTTGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TPPSHGPTKQSPLISTVHNLSLQ*VFVAGR
Trigger: TCTTCCAGCAACAAAGACTCACTGAAGACTTAGATT...ATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp AGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACACTGAGAATACGGTGGTaGAGAATCAGATACGGCAAG +
Preference number: 4 (lower is better)
Translates to: RFSSYFVQNNHYGSHSLTLRIRW*RIRYGK
Trigger: CTTGCCGTATCTGATTCTTCACCACCGTATTCTCAG...TGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp AGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAGCTCACTGCAACCTCTaGCTCTGGATTCAAGCAATT +
Preference number: 4 (lower is better)
Translates to: RFSSYFVQNNHYGSHSLTAHCNL*LWIQAI
Trigger: AATTGCTTGAATCCAGAGGCAGAGGTTGCAGTGAGC...TGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR GCA 90 bp TATGTTTCTCCCAGGCTGCTTATCTCTAATCATAATGGCCTAATACAGGGATATGCTGAAGCACAGTGGTaGAACCTCAGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: YVSPRLLISNHNGLIQGYAEAQW*NLSSLQ
Trigger: TTGCAGTGAGCTGAGGTTGCACCACTGTGCTTCAGC...ATATCCCTGTATTAGGCCATTATGATTAGAGATAAGCAGCCTGGGAGAAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACGCTGGAAGACAGTCTTaGCTCACTGTTGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: FLSERFICSMCCCWIAFYAGRQS*LTVDGC
Trigger: GCAGCCATCAACAGTGAGGCAAGACTGTCTTCCAGC...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR GCA 90 bp TCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCTCAGTGAGTCTTTGTTaGTGGAAGACAGTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SRRFSSYFVQNNHYGSHSSVSLC*WKTVLP
Trigger: AGGCAAGACTGTCTTCCAGCAACAAAGACTCACTGA...GCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR GCA 90 bp GTAGTTTCCATCTCAAGAAACCACTTTTGTGGCTCTTATATTAGAAGCAACTCCCCAGCAACCCCACGATaGAGATACAGCCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: VVSISRNHFCGSYIRSNSPATPR*RYSHCC
Trigger: ACAACAGTGGCTGTATCTGCATCGTGGGGTTGCTGG...GGAGTTGCTTCTAATATAAGAGCCACAAAAGTGGTTTCTTGAGATGGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp CCCACTAAACAATCTCCATTAATCTCTACAGTCCATTGTTGGAAGCTTATTCCACCAGCAACCCCACGATaGAGATACAGCCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: PTKQSPLISTVHCWKLIPPATPR*RYSHCC
Trigger: ACAACAGTGGCTGTATCTGCATCGTGGGGTTGCTGG...TGGAATAAGCTTCCAACAATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR GCA 90 bp CAAGGGCAACATAACTTCAACTGTATTAATACCCCACCTAGCCATGGGCCCACTATTCTCAAAGATCTGTaGCAAGGGCAACATAACTTC +
Preference number: 4 (lower is better)
Translates to: QGQHNFNCINTPPSHGPTILKDL*QGQHNF
Trigger: GAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAAT...AGTGGGCCCATGGCTAGGTGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR GCA 90 bp TCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCTCAGAGATGAGGTTTTaGCAAGCGAGCATGACAAAG +
Preference number: 4 (lower is better)
Translates to: SRRFSSYFVQNNHYGSHSSEMRF*QASMTK
Trigger: CTTTGTCATGCTCGCTTGGCAAAACCTCATCTCTGA...GCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp TTTTTACTACAGAATGTGAAACGACCTTCCTGGTGGTCCAGTCTCTTCAATGGGTTCTACACCAGCACTTaGTGCTTCACCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: FLLQNVKRPSWWSSLFNGFYTST*CFTLHF
Trigger: AAAGTGCAAGGTGAAGCAGCAAGTGCTGGTGTAGAA...CCCATTGAAGAGACTGGACCACCAGGAAGGTCGTTTCACATTCTGTAGTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAGAGAAGTCCTCCTACTaGCATTCTGTGCAACTCTGT +
Preference number: 4 (lower is better)
Translates to: RFSSYFVQNNHYGSHSLTEKSSY*HSVQLC
Trigger: ACAGAGTTGCACAGAATGCCAGTAGGAGGACTTCTC...TGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGGAGAAGTCCTCCTACTaGCATTCTGTGCAACTCTGT +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKEKSSY*HSVQLC
Trigger: ACAGAGTTGCACAGAATGCCAGTAGGAGGACTTCTC...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAATGCAACCTCTGCCTCTaGATTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GFQVTLYRTTTMAATALQCNLCL*IQAILL
Trigger: CAGGAGAATTGCTTGAATCCAGAGGCAGAGGTTGCA...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp TCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCTTACTCCTTGACCCATaGAGTAATGGATCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SRRFSSYFVQNNHYGSHSLLLDP*SNGSCR
Trigger: TCTGCAGGATCCATTACTCCATGGGTCAAGGAGTAA...GCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp TCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCAGCATGTGTTGCTGTTaGATAGCCTTTTACCCACAG +
Preference number: 4 (lower is better)
Translates to: SRRFSSYFVQNNHYGSHSSMCCC*IAFYPQ
Trigger: CTGTGGGTAAAAGGCTATCCAACAGCAACACATGCT...GCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp TGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAGACCAGCATGTGTTGCTGTTaGATAGCCTTTTACCCACAG +
Preference number: 4 (lower is better)
Translates to: CSGLGFGLREFVVGLIQTSMCCC*IAFYPQ
Trigger: CTGTGGGTAAAAGGCTATCCAACAGCAACACATGCT...GGTCTGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAATGGAGGCTATTTTCTaGGTGAAGGCTTTGCCACAC +
Preference number: 4 (lower is better)
Translates to: GFQVTLYRTTTMAATALQMEAIF*VKALPH
Trigger: GTGTGGCAAAGCCTTCACCCAGAAAATAGCCTCCAT...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGATGGAGGCTATTTTCTaGGTGAAGGCTTTGCCACAC +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKMEAIF*VKALPH
Trigger: GTGTGGCAAAGCCTTCACCCAGAAAATAGCCTCCAT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp AATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACAGCAGAACAGGATCCCTaGAGAAGAACAGGAGGTATG +
Preference number: 4 (lower is better)
Translates to: NLYSPLLEAYSNSLPVATAEQDP*RRTGGM
Trigger: CATACCTCCTGTTCTTCTCCAGGGATCCTGTTCTGC...TGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp AGCAGACATAAAAACATTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTGCGAGCAGGTACACCCTaGCTGAAGACAGAAGACCCT +
Preference number: 4 (lower is better)
Translates to: SRHKNINLFVHLHQNSWVRAGTP*LKTEDP
Trigger: AGGGTCTTCTGTCTTCAGCCAGGGTGTACCTGCTCG...CACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTAAAATTAGCTGGGCGTaGTGGCACACACTACTCAGG +
Preference number: 4 (lower is better)
Translates to: FICSMCCCWIAFYPQWNIKISWA*WHTLLR
Trigger: CCTGAGTAGTGTGTGCCACCACGCCCAGCTAATTTT...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCGATGGATGCAGTCTGTaGCACCCCAAAACAATTACA +
Preference number: 4 (lower is better)
Translates to: SRRFSSYFVQNNHYGSHSDGCSL*HPKTIT
Trigger: TGTAATTGTTTTGGGGTGCCACAGACTGCATCCATC...GCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGAAGATCCTCAAGAGCTaGCACGTAGAACTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKKILKS*HVELAE
Trigger: TTCAGCGAGTTCTACGTGCCAGCTCTTGAGGATCTT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403205.6
CDS-3UTR TCA 90 bp AGCAGACATAAAAACATTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTGAAGGTCACTGACTCCTaGGGCCAAGTTGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SRHKNINLFVHLHQNSWVKVTDS*GQVVWS
Trigger: GCTCCAAACAACTTGGCCTCAGGAGTCAGTGACCTT...CACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp AGCAGACATAAAAACATTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTGGCTGAGAAACGTTCCTaGGAAGTCCTCCTACTGGCA +
Preference number: 4 (lower is better)
Translates to: SRHKNINLFVHLHQNSWVAEKRS*EVLLLA
Trigger: TGCCAGTAGGAGGACTTCTCAGGAACGTTTCTCAGC...CACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp ACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCATATGGACAATAAAAAGTaGCCTACAACCGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: TPPSHGPTKQSPLISTVHMDNKK*PTTESF
Trigger: AAAGCTTTCGGTTGTAGGTCACTTTTTATTGTCCAT...ATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAAACTTCCATACCATTTaGAGGCTTTCCCACACACCT +
Preference number: 4 (lower is better)
Translates to: GFQVTLYRTTTMAATALQNFHTI*RLSHTP
Trigger: AGGTGTGTGGGAAAGCCTTCAAATGGTATGGAAGTT...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGAACTTCCATACCATTTaGAGGCTTTCCCACACACCT +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKNFHTI*RLSHTP
Trigger: AGGTGTGTGGGAAAGCCTTCAAATGGTATGGAAGTT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR TCA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCTCACGTTTAAAGACATaGTTACTCTCACTGCCATCA +
Preference number: 4 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVSRLKT*LLSLPS
Trigger: TGATGGCAGTGAGAGTAATCATGTCTTTAAACGTGA...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACAGGTACACCCTGGCTaGAGACAGAAGACCCTACCA +
Preference number: 4 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPQVHPG*RQKTLP
Trigger: TGGTAGGGTCTTCTGTCTTCAGCCAGGGTGTACCTG...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp AGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAGGCCCTAGGATTTTCTaGATGGTAAATGAGCATTGG +
Preference number: 4 (lower is better)
Translates to: RFSSYFVQNNHYGSHSLTGPRIF*MVNEHW
Trigger: CCAATGCTCATTTACCATTCAGAAAATCCTAGGGCC...TGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp ACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCATATGTTTCTCCCAGGCTaGTTATCTCTAATCATAATG +
Preference number: 4 (lower is better)
Translates to: TPPSHGPTKQSPLISTVHMFLPG*LSLIIM
Trigger: CATTATGATTAGAGATAAGCAGCCTGGGAGAAACAT...ATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR GCA 90 bp AATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACACTAGGTGTCAGCCACTaGACCTGGCCACTTTATTAT +
Preference number: 4 (lower is better)
Translates to: NLYSPLLEAYSNSLPVATLGVSH*TWPLYY
Trigger: ATAATAAAGTGGCCAGGTGCAGTGGCTGACACCTAG...TGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGACTGTCTTCTGGGTTTaGACAAGCAAGATCCTCAAG +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKTVFWV*TSKILK
Trigger: CTTGAGGATCTTGCTTGTCCAAACCCAGAAGACAGT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp AGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACATCATGCACTGTCTTCTaGGTTTGGACAAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: RFSSYFVQNNHYGSHSLTSCTVF*VWTSKI
Trigger: GATCTTGCTTGTCCAAACCCAGAAGACAGTGCATGA...TGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp CAGAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATATCATGCACTGTCTTCTaGGTTTGGACAAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: QNPKPVFPRSPCNLDIHISCTVF*VWTSKI
Trigger: GATCTTGCTTGTCCAAACCCAGAAGACAGTGCATGA...TATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGTCATGCACTGTCTTCTaGGTTTGGACAAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKSCTVF*VWTSKI
Trigger: GATCTTGCTTGTCCAAACCCAGAAGACAGTGCATGA...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp AATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACATGCAACCTCTGCCTCTaGATTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: NLYSPLLEAYSNSLPVATCNLCL*IQAILL
Trigger: CAGGAGAATTGCTTGAATCCAGAGGCAGAGGTTGCA...TGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCGGCCCTTCTCCAATGTaGTTTTTCTCATGTACAATA +
Preference number: 4 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVGPSPM*FFSCTI
Trigger: TATTGTACATGAGAAAAACCACATTGGAGAAGGGCC...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp AATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACAATGGAGGCTATTTTCTaGGTGAAGGCTTTGCCACAC +
Preference number: 4 (lower is better)
Translates to: NLYSPLLEAYSNSLPVATMEAIF*VKALPH
Trigger: GTGTGGCAAAGCCTTCACCCAGAAAATAGCCTCCAT...TGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp CAGAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATATCTCCTGATCATTTTTaGTGCAGGAACAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QNPKPVFPRSPCNLDIHISPDHF*CRNREG
Trigger: GCCTTCTCTGTTCCTGCACCAAAAATGATCAGGAGA...TATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CAA 72 bp ACTTCTCTCAGCCTTCATACAATGGCAGTTATGGCCTaGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGT +
Preference number: 4 (lower is better)
Translates to: TSLSLHTMAVMA*LWIRFWLKGIC
Trigger: ACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCAAGGCCATAACTGCCATTGTATGAAGGCTGAGAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp GTAGTTTCCATCTCAAGAAACCACTTTTGTGGCTCTTATATTAGAAGCAACTCCCTAGCCCTTCATTTTTaGTCCAGGACTCACCACCTT +
Preference number: 4 (lower is better)
Translates to: VVSISRNHFCGSYIRSNSLALHF*SRTHHL
Trigger: AAGGTGGTGAGTCCTGGATCAAAAATGAAGGGCTAG...GGAGTTGCTTCTAATATAAGAGCCACAAAAGTGGTTTCTTGAGATGGAAACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp CCCACTAAACAATCTCCATTAATCTCTACAGTCCATTGTTGGAAGCTTATTCCACTAGCCCTTCATTTTTaGTCCAGGACTCACCACCTT +
Preference number: 4 (lower is better)
Translates to: PTKQSPLISTVHCWKLIPLALHF*SRTHHL
Trigger: AAGGTGGTGAGTCCTGGATCAAAAATGAAGGGCTAG...TGGAATAAGCTTCCAACAATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCAGCTGAGAAACGTTCCTaGGAAGTCCTCCTACTGGCA +
Preference number: 4 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPAEKRS*EVLLLA
Trigger: TGCCAGTAGGAGGACTTCTCAGGAACGTTTCTCAGC...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTGGTCTCAAACTCCTaGCCTCAACTGATCCACCTC +
Preference number: 4 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPLVSNS*PQLIHL
Trigger: GAGGTGGATCAGTTGAGGTCAGGAGTTTGAGACCAG...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310898.5
CDS-3UTR TCA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTGGCTGCAACATCAACTaGCTCTTCCTTTCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVGCNIN*LFLSER
Trigger: TCTTTCGGAAAGGAAGAGTCAGTTGATGTTGCAGCC...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAACTTCACACAGTCCTCTaGATAGTTGTAAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: GFQVTLYRTTTMAATALQLHTVL*IVVKDP
Trigger: AGGATCCTTTACAACTATTCAGAGGACTGTGTGAAG...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp GAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATATACTGTCATCCAGGCTTTaGTCTTCCATTTCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: ESKTCISQKPLQLGHTYILSSRL*SSISRA
Trigger: TGCTCTAGAAATGGAAGATCAAAGCCTGGATGACAG...TATATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp CTAGTTATCTTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTTCTTCAGAGGCTTCCTaGTTTATAACTAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LVILLFPPHLQLLRPLKSSSEAS*FITSPS
Trigger: TGAAGGGCTAGTTATAAAGCAGGAAGCCTCTGAAGA...AGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAGATAACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR GCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGTCTTCAGAGGCTTCCTaGTTTATAACTAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKSSEAS*FITSPS
Trigger: TGAAGGGCTAGTTATAAAGCAGGAAGCCTCTGAAGA...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR GCA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTTCAGTGAGTCTTTGTTaGTGGAAGACAGTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: FICSMCCCWIAFYPQWNISVSLC*WKTVLP
Trigger: AGGCAAGACTGTCTTCCAGCAACAAAGACTCACTGA...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCAAGAACGCCGAGGAGCTaGTCACTAACTAAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPRTPRS*SLTKGR
Trigger: TCGGCCTTTAGTTAGTGACCAGCTCCTCGGCGTTCT...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTCTCCATCAGAACTCTTaGGTGACCAGACACATTATC +
Preference number: 4 (lower is better)
Translates to: FICSMCCCWIAFYPQWNILHQNS*VTRHII
Trigger: GATAATGTGTCTGGTCACCCAAGAGTTCTGATGGAG...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp GCCTTGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAAGAACCTTAAAACACTaGCACTGTTTAGTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ALLWIRFWLKGICGWFDPRTLKH*HCLVEV
Trigger: CACTTCCACTAAACAGTGCCAGTGTTTTAAGGTTCT...TGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACAGGTCTTGTATGTTTCATGAGGAACCAGAAGTaGGTTACTGAGTGTGACAGA +
Preference number: 4 (lower is better)
Translates to: LLEAYSNSLPVATGLVCFMRNQK*VTECDR
Trigger: TCTGTCACACTCAGTAACCCACTTCTGGTTCCTCAT...GAAACATACAAGACCTGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAACTTGGTTCTGTGGTTaGTCATTTTTCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GFQVTLYRTTTMAATALQTWFCG*SFFLAS
Trigger: AGAAGCCAGGAAAAATGACCAACCACAGAACCAAGT...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TGCAGATACAGCCACTGTTGTTCAAGCCTGAAAGGGACCAATGCAAAGGTTAAGCAAAAGAAGGCTGTTTaGAATACACTGAAAATCTCG +
Preference number: 4 (lower is better)
Translates to: CRYSHCCSSLKGTNAKVKQKKAV*NTLKIS
Trigger: CGAGATTTTCAGTGTATTCCAAACAGCCTTCTTTTG...CTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp AGCAGACATAAAAACATTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTGCTAGCCCTTCATTTTTaGTCCAGGACTCACCACCTT +
Preference number: 4 (lower is better)
Translates to: SRHKNINLFVHLHQNSWVLALHF*SRTHHL
Trigger: AAGGTGGTGAGTCCTGGATCAAAAATGAAGGGCTAG...CACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGGATTTGGATTTAGATTaGAAGTCTGCTTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKDLDLD*KSASVP
Trigger: AGGCACTGAAGCAGACTTTCAATCTAAATCCAAATC...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR TCA 90 bp CTAGTTATCTTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTAGAGATTTCTTTAAATaGGACAACAAGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LVILLFPPHLQLLRPLKSRDFFK*DNKEGC
Trigger: GCAGCCTTCCTTGTTGTCTCATTTAAAGAAATCTCT...AGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAGATAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp CAGAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATAAATTTGTGGTTGGTTTaGTCCAGACCCCTAAAACTT +
Preference number: 4 (lower is better)
Translates to: QNPKPVFPRSPCNLDIHINLWLV*SRPLKL
Trigger: AAGTTTTAGGGGTCTGGATCAAACCAACCACAAATT...TATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp AATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACATCTTCAGAGGCTTCCTaGTTTATAACTAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: NLYSPLLEAYSNSLPVATSSEAS*FITSPS
Trigger: TGAAGGGCTAGTTATAAAGCAGGAAGCCTCTGAAGA...TGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR GCA 90 bp GCCTTGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAATGTTTCTCCCAGGCTaGTTATCTCTAATCATAATG +
Preference number: 4 (lower is better)
Translates to: ALLWIRFWLKGICGWFDPMFLPG*LSLIIM
Trigger: CATTATGATTAGAGATAAGCAGCCTGGGAGAAACAT...TGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGATTCTCAAAGATCTGTaGCAAGGGCAACATAACTTC +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKILKDL*QGQHNF
Trigger: GAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAAT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACTTACTCCTTGACCCATaGAGTAATGGATCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FLSERFICSMCCCWIAFYLLLDP*SNGSCR
Trigger: TCTGCAGGATCCATTACTCCATGGGTCAAGGAGTAA...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGGGCCCTTCTCCAATGTaGTTTTTCTCATGTACAATA +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKGPSPM*FFSCTI
Trigger: TATTGTACATGAGAAAAACCACATTGGAGAAGGGCC...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp TGGTCTAATTTCAATACTGTTGTGTCTGAGAGAATAGTGAGGTCTGAGGAGAGGAAGACACGCACTATTTaGGCAGATGAAGAAGGTATT +
Preference number: 4 (lower is better)
Translates to: WSNFNTVVSERIVRSEERKTRTI*ADEEGI
Trigger: AATACCTTCTTCATCTGCCCAAATAGTGCGTGTCTT...CCTCTCCTCAGACCTCACTATTCTCTCAGACACAACAGTATTGAAATTAGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGAAGACACGCACTATTTaGGCAGATGAAGAAGGTATT +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKKTRTI*ADEEGI
Trigger: AATACCTTCTTCATCTGCCCAAATAGTGCGTGTCTT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CCA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCAAAACGACCTTCCTGGTaGTCCAGTCTCTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPKRPSW*SSLFNG
Trigger: CCCATTGAAGAGACTGGACCACCAGGAAGGTCGTTT...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGGAAGCCCCTGCAACTTaGACATACATATATAACCAA +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKEAPAT*TYIYNQ
Trigger: TTGGTTATATATGTATGTCCAAGTTGCAGGGGCTTC...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp GTAGTTTCCATCTCAAGAAACCACTTTTGTGGCTCTTATATTAGAAGCAACTCCAAGCAGTCTAGCTTTTaGCCTATCTCAGCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: VVSISRNHFCGSYIRSNSKQSSF*PISAVD
Trigger: GTCAACAGCTGAGATAGGCCAAAAGCTAGACTGCTT...GGAGTTGCTTCTAATATAAGAGCCACAAAAGTGGTTTCTTGAGATGGAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TGGTCTAATTTCAATACTGTTGTGTCTGAGAGAATAGTGAGGTCTGAGGAGAGGCGTTCATGTGTTCCCTaGAGAAGTACTTTTCATTTC +
Preference number: 4 (lower is better)
Translates to: WSNFNTVVSERIVRSEERRSCVP*RSTFHF
Trigger: GAAATGAAAAGTACTTCTCCAGGGAACACATGAACG...CCTCTCCTCAGACCTCACTATTCTCTCAGACACAACAGTATTGAAATTAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp AATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACAGATTTGGATTTAGATTaGAAGTCTGCTTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: NLYSPLLEAYSNSLPVATDLDLD*KSASVP
Trigger: AGGCACTGAAGCAGACTTTCAATCTAAATCCAAATC...TGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGATGGACAATAAAAAGTaGCCTACAACCGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKMDNKK*PTTESF
Trigger: AAAGCTTTCGGTTGTAGGTCACTTTTTATTGTCCAT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR TCA 90 bp GTAGTTTCCATCTCAAGAAACCACTTTTGTGGCTCTTATATTAGAAGCAACTCCTTTTACTACAGAATGTaGAACGACCTTCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VVSISRNHFCGSYIRSNSFYYRM*NDLPGG
Trigger: ACCACCAGGAAGGTCGTTTCACATTCTGTAGTAAAA...GGAGTTGCTTCTAATATAAGAGCCACAAAAGTGGTTTCTTGAGATGGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTCTGCTCAACATATTCTaGAAATCCCTTCCCCATTTT +
Preference number: 4 (lower is better)
Translates to: FICSMCCCWIAFYPQWNILLNIF*KSLPHF
Trigger: AAAATGGGGAAGGGATTTTCAGAATATGTTGAGCAG...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp CTAGTTATCTTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTAAAGTGAGAGGCATGTaGCTTTTTCACTTAAACACT +
Preference number: 4 (lower is better)
Translates to: LVILLFPPHLQLLRPLKSKVRGM*LFHLNT
Trigger: AGTGTTTAAGTGAAAAAGTCACATGCCTCTCACTTT...AGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAGATAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTTTTGCATTCACAACTTaGCTGTTTGGCAGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVFAFTT*LFGRSS
Trigger: ACTGCTTCTGCCAAACAGTCAAGTTGTGAATGCAAA...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp GTAGTTTCCATCTCAAGAAACCACTTTTGTGGCTCTTATATTAGAAGCAACTCCTCTTCAGAGGCTTCCTaGTTTATAACTAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: VVSISRNHFCGSYIRSNSSSEAS*FITSPS
Trigger: TGAAGGGCTAGTTATAAAGCAGGAAGCCTCTGAAGA...GGAGTTGCTTCTAATATAAGAGCCACAAAAGTGGTTTCTTGAGATGGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR GCA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTATCTGTAGCATGTGTTaGTGTTGGATAGCCTTTTAC +
Preference number: 4 (lower is better)
Translates to: FICSMCCCWIAFYPQWNIICSMC*CWIAFY
Trigger: GTAAAAGGCTATCCAACAGCAACACATGCTACAGAT...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR GCA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAATATCTTGGAGATATTaGAGGTTTGCTTCCAGACAA +
Preference number: 4 (lower is better)
Translates to: GFQVTLYRTTTMAATALQISWRY*RFASRQ
Trigger: TTGTCTGGAAGCAAACCTGCAATATCTCCAAGATAT...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR GCA 90 bp AGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAATATCTTGGAGATATTaGAGGTTTGCTTCCAGACAA +
Preference number: 4 (lower is better)
Translates to: RFSSYFVQNNHYGSHSLTISWRY*RFASRQ
Trigger: TTGTCTGGAAGCAAACCTGCAATATCTCCAAGATAT...TGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR GCA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCTGATCATTTTTGGTaGAGGAACAGAGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: FLSERFICSMCCCWIAFYPDHFW*RNREGK
Trigger: TTTGCCTTCTCTGTTCCTGCACCAAAAATGATCAGG...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp AGCAGACATAAAAACATTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTGAGCTTCAAACTTTCCTaGAGCTTCCTCACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SRHKNINLFVHLHQNSWVSFKLS*SFLTSL
Trigger: GAGAGAAGTGAGGAAGCTGCAGGAAAGTTTGAAGCT...CACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCAGAGAAGTCCTCCTACTaGCATTCTGTGCAACTCTGT +
Preference number: 4 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPEKSSY*HSVQLC
Trigger: ACAGAGTTGCACAGAATGCCAGTAGGAGGACTTCTC...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGTCTACAGTCCATTGTTaGAAGCTTATTCCAATTCTC +
Preference number: 4 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKSTVHC*KLIPIL
Trigger: GAGAATTGGAATAAGCTTCCAACAATGGACTGTAGA...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp CTAGTTATCTTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTATATCTCTCAAAGTATaGTCCATGCTAAAGATCTGG +
Preference number: 4 (lower is better)
Translates to: LVILLFPPHLQLLRPLKSISLKV*SMLKIW
Trigger: CCAGATCTTTAGCATGGACCATACTTTGAGAGATAT...AGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAGATAACTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp GAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATATAAGCAGGGGAGTTAAGTaGACTCCAAAAATTGTAGTA +
Preference number: 4 (lower is better)
Translates to: ESKTCISQKPLQLGHTYISRGVK*TPKIVV
Trigger: TACTACAATTTTTGGAGTCCACTTAACTCCCCTGCT...TATATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCTGAGAGGGATGCTTTaGAAGTTACAGAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: FLSERFICSMCCCWIAFYLRGML*KLQKRE
Trigger: TTCTCTCTTCTGTAACTTCCAAAGCATCCCTCTCAG...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TTTTTACTACAGAATGTGAAACGACCTTCCTGGTGGTCCAGTCTCTTCAATGGGATGGTAAATGAGCATTaGCTTCAACTTAAAGTTACC +
Preference number: 4 (lower is better)
Translates to: FLLQNVKRPSWWSSLFNGMVNEH*LQLKVT
Trigger: GGTAACTTTAAGTTGAAGCCAATGCTCATTTACCAT...CCCATTGAAGAGACTGGACCACCAGGAAGGTCGTTTCACATTCTGTAGTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CAA 72 bp AATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTaGTACAGAACAACCACTATGGCAGCCACAGCCTTA +
Preference number: 4 (lower is better)
Translates to: NDESFPEGFQVT*YRTTTMAATAL
Trigger: TAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
3UTR CAA 72 bp AAGCAACTCCTCATTTGTTCACGTTTTATCATGAGATaGCAGCAATTCAGTCACATATGCAGGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: KQLLICSRFIMR*QQFSHICRFHF
Trigger: GAAGTGGAACCTGCATATGTGACTGAATTGCTGCAATCTCATGATAAAACGTGAACAAATGAGGAGTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACGATTTGGATTTAGATTaGAAGTCTGCTTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: FLSERFICSMCCCWIAFYDLDLD*KSASVP
Trigger: AGGCACTGAAGCAGACTTTCAATCTAAATCCAAATC...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTAATCTAAGTCTTCAGTaGGTCTTTGTTGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVNLSLQ*VFVAGR
Trigger: TCTTCCAGCAACAAAGACTCACTGAAGACTTAGATT...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp AATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACAATGGACAATAAAAAGTaGCCTACAACCGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: NLYSPLLEAYSNSLPVATMDNKK*PTTESF
Trigger: AAAGCTTTCGGTTGTAGGTCACTTTTTATTGTCCAT...TGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR TCA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTTCACGTTTAAAGACATaGTTACTCTCACTGCCATCA +
Preference number: 4 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVSRLKT*LLSLPS
Trigger: TGATGGCAGTGAGAGTAATCATGTCTTTAAACGTGA...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp ATTCTCAAAGATCTGTGCCAAGGGCAACATAACTTCAACTGTATTAATACCCCAATCTGTAGCATGTGTTaGTGTTGGATAGCCTTTTAC +
Preference number: 4 (lower is better)
Translates to: ILKDLCQGQHNFNCINTPICSMC*CWIAFY
Trigger: GTAAAAGGCTATCCAACAGCAACACATGCTACAGAT...TGGGGTATTAATACAGTTGAAGTTATGTTGCCCTTGGCACAGATCTTTGAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp TTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACAGGTCTTGTATGTTTCGAGATATTGCAGGTTTaGTTCCAGACAACTGTAATA +
Preference number: 4 (lower is better)
Translates to: LLEAYSNSLPVATGLVCFEILQV*FQTTVI
Trigger: TATTACAGTTGTCTGGAAGCAAACCTGCAATATCTC...GAAACATACAAGACCTGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCAACTGTCTTCTGGGTTTaGACAAGCAAGATCCTCAAG +
Preference number: 4 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPTVFWV*TSKILK
Trigger: CTTGAGGATCTTGCTTGTCCAAACCCAGAAGACAGT...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACTTGTCATTTCAACAATaGTCACAGGATCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: FLSERFICSMCCCWIAFYLSFQQ*SQDLHQ
Trigger: CTGGTGAAGATCCTGTGACCATTGTTGAAATGACAA...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTTTGTCATTTCAACAATaGTCACAGGATCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVLSFQQ*SQDLHQ
Trigger: CTGGTGAAGATCCTGTGACCATTGTTGAAATGACAA...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp CCCACTAAACAATCTCCATTAATCTCTACAGTCCATTGTTGGAAGCTTATTCCAAAGACACGCACTATTTaGGCAGATGAAGAAGGTATT +
Preference number: 4 (lower is better)
Translates to: PTKQSPLISTVHCWKLIPKTRTI*ADEEGI
Trigger: AATACCTTCTTCATCTGCCCAAATAGTGCGTGTCTT...TGGAATAAGCTTCCAACAATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CCA 90 bp AATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACAAGATTCCCCTCGAGTTaGCTTTACACCATTATTTTT +
Preference number: 4 (lower is better)
Translates to: NLYSPLLEAYSNSLPVATRFPSS*LYTIIF
Trigger: AAAAATAATGGTGTAAAGCCAACTCGAGGGGAATCT...TGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCAAACCACTTGGTTCTGTaGTTGGTCATTTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPNHLVL*LVIFPG
Trigger: GCCAGGAAAAATGACCAACCACAGAACCAAGTGGTT...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCTCTGGATTAGGTTTTaGCTTAAGGGAATTTGTGGT +
Preference number: 4 (lower is better)
Translates to: FLSERFICSMCCCWIAFYLWIRF*LKGICG
Trigger: ACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAG...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR TCA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTGTCATGAATTTAAAGTaGCAGTTCAGCCTGGTAATA +
Preference number: 4 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVVMNLK*QFSLVI
Trigger: TATTACCAGGCTGAACTGTCACTTTAAATTCATGAC...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTGAGATATTGCAGGTTTaGTTCCAGACAACTGTAATA +
Preference number: 4 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVEILQV*FQTTVI
Trigger: TATTACAGTTGTCTGGAAGCAAACCTGCAATATCTC...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCAGATTTGGATTTAGATTaGAAGTCTGCTTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPDLDLD*KSASVP
Trigger: AGGCACTGAAGCAGACTTTCAATCTAAATCCAAATC...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR TCA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCAAGAGATTTCTTTAAATaGGACAACAAGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPRDFFK*DNKEGC
Trigger: GCAGCCTTCCTTGTTGTCTCATTTAAAGAAATCTCT...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CCA 90 bp GTAGTTTCCATCTCAAGAAACCACTTTTGTGGCTCTTATATTAGAAGCAACTCCCATGAAAGTCCTAGATaGTTTCTTCTTCCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: VVSISRNHFCGSYIRSNSHESPR*FLLPKE
Trigger: TTCTTTTGGAAGAAGAAACCATCTAGGACTTTCATG...GGAGTTGCTTCTAATATAAGAGCCACAAAAGTGGTTTCTTGAGATGGAAACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR GCA 90 bp AGCAGACATAAAAACATTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTGATATTCAGTAATCCATaGTGTAAACAGATGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRHKNINLFVHLHQNSWVIFSNP*CKQMCC
Trigger: ACAGCACATCTGTTTACAGCATGGATTACTGAATAT...CACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CCA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCATCTACAGTCCATTGTTaGAAGCTTATTCCAATTCTC +
Preference number: 4 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPSTVHC*KLIPIL
Trigger: GAGAATTGGAATAAGCTTCCAACAATGGACTGTAGA...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
3UTR CAA 72 bp ACTTTTGTGGCTCTTATATTAGAAGCAACTCCTCATTaGTTCACGTTTTATCATGAGATTGCAGCAATTCAG +
Preference number: 4 (lower is better)
Translates to: TFVALILEATPH*FTFYHEIAAIQ
Trigger: CTGAATTGCTGCAATCTCATGATAAAACGTGAACAAATGAGGAGTTGCTTCTAATATAAGAGCCACAAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS TCA 90 bp GCCACCTTGACGGCTTCGGCGAGGCCCAGATGCCCACGGTCCGGGTaGAGGAGGGGCGGGCCGCCATTGGGACCAAGTTCAGGGGTAGTG +
Preference number: 5 (lower is better)
Translates to: ATLTASARPRCPRSG*RRGGPPLGPSSGVV
Trigger: CACTACCCCTGAACTTGGTCCCAATGGCGGCCCGCCCCTCCTTCACCCGGACCGTGGGCATCTGGGCCTCGCCGAAGCCGTCAAGGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310898.5
ENST00000339296.10
ENST00000431278.5
ENST00000490457.5
CDS-3UTR CAA 90 bp TTTTTACTACAGAATGTGAAACGACCTTCCTGGTGGTCCAGTCTCTTCAATGGGGCCCGAGCAGCCACCTaGACGGCTTCGGCGAGGCCC +
Preference number: 5 (lower is better)
Translates to: FLLQNVKRPSWWSSLFNGARAAT*TASARP
Trigger: GGGCCTCGCCGAAGCCGTCAAGGTGGCTGCTCGGGC...CCCATTGAAGAGACTGGACCACCAGGAAGGTCGTTTCACATTCTGTAGTAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS CCA 90 bp AGAGGAGCACTGGGGACTGACCAGGGATGGCCCAAGGACCTTGACTaGCTTCTTCTCCACAGGGTGCAATTTCTGATGCTGAACAAAACT +
Preference number: 5 (lower is better)
Translates to: RGALGTDQGWPKDLD*LLLHRVQFLMLNKT
Trigger: AGTTTTGTTCAGCATCAGAAATTGCACCCTGTGGAGAAGAAGCCAGTCAAGGTCCTTGGGCCATCCCTGGTCAGTCCCCAGTGCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
ENST00000492098.1
CDS-3UTR CAA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTGCCCGAGCAGCCACCTaGACGGCTTCGGCGAGGCCC +
Preference number: 5 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVARAAT*TASARP
Trigger: GGGCCTCGCCGAAGCCGTCAAGGTGGCTGCTCGGGC...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp CAGAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATAAGGGGCGGGCCGCCATaGGGACCAAGTTCAGGGGTA +
Preference number: 5 (lower is better)
Translates to: QNPKPVFPRSPCNLDIHIRGGPP*GPSSGV
Trigger: TACCCCTGAACTTGGTCCCAATGGCGGCCCGCCCCT...TATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp TGCAGATACAGCCACTGTTGTTCAAGCCTGAAAGGGACCAATGCAAAGGTTAAGCTGAGGCCAAGTTGTTaGGAGCATGGCGGATGTCCC +
Preference number: 5 (lower is better)
Translates to: CRYSHCCSSLKGTNAKVKLRPSC*EHGGCP
Trigger: GGGACATCCGCCATGCTCCAAACAACTTGGCCTCAG...CTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CAA 90 bp CTAGTTATCTTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTGAGGGTGCTGGACGATaGGCAGGCAGCACTTGGGAC +
Preference number: 5 (lower is better)
Translates to: LVILLFPPHLQLLRPLKSEGAGR*AGSTWD
Trigger: GTCCCAAGTGCTGCCTGCCAATCGTCCAGCACCCTC...AGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAGATAACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp GCCTTGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAGACAGGGGTCTCACTTaGTGGCCCAAGCTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: ALLWIRFWLKGICGWFDPDRGLT*WPKLVS
Trigger: CGAGACCAGCTTGGGCCACAAAGTGAGACCCCTGTC...TGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp TATGTTTCTCCCAGGCTGCTTATCTCTAATCATAATGGCCTAATACAGGGATATAGGGGCGGGCCGCCATaGGGACCAAGTTCAGGGGTA +
Preference number: 5 (lower is better)
Translates to: YVSPRLLISNHNGLIQGYRGGPP*GPSSGV
Trigger: TACCCCTGAACTTGGTCCCAATGGCGGCCCGCCCCT...ATATCCCTGTATTAGGCCATTATGATTAGAGATAAGCAGCCTGGGAGAAACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CAA 90 bp TGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAGACCCTGAGGCCAAGTTGTTaGGAGCATGGCGGATGTCCC +
Preference number: 5 (lower is better)
Translates to: CSGLGFGLREFVVGLIQTLRPSC*EHGGCP
Trigger: GGGACATCCGCCATGCTCCAAACAACTTGGCCTCAG...GGTCTGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp TTTTTACTACAGAATGTGAAACGACCTTCCTGGTGGTCCAGTCTCTTCAATGGGAAGGAGGAGAATCGCTaGAACCCAGGAGGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: FLLQNVKRPSWWSSLFNGKEENR*NPGGGG
Trigger: ACCTCCCCCTCCTGGGTTCAAGCGATTCTCCTCCTT...CCCATTGAAGAGACTGGACCACCAGGAAGGTCGTTTCACATTCTGTAGTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS CCA 90 bp GGGGTGAGAATAACTGGGGAAGGTTTCACAGTGGGAGTAAGACCCTaGAAGACACGCACTATTTGGGCAGATGAAGAAGGTATTCCAGAT +
Preference number: 5 (lower is better)
Translates to: GVRITGEGFTVGVRP*KTRTIWADEEGIPD
Trigger: ATCTGGAATACCTTCTTCATCTGCCCAAATAGTGCGTGTCTTCCAGGGTCTTACTCCCACTGTGAAACCTTCCCCAGTTATTCTCACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CAA 90 bp AGCAGACATAAAAACATTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTGAGGGGCGGGCCGCCATaGGGACCAAGTTCAGGGGTA +
Preference number: 5 (lower is better)
Translates to: SRHKNINLFVHLHQNSWVRGGPP*GPSSGV
Trigger: TACCCCTGAACTTGGTCCCAATGGCGGCCCGCCCCT...CACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGCTGAGGCCAAGTTGTTaGGAGCATGGCGGATGTCCC +
Preference number: 5 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKLRPSC*EHGGCP
Trigger: GGGACATCCGCCATGCTCCAAACAACTTGGCCTCAG...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CAA 90 bp TGCAGATACAGCCACTGTTGTTCAAGCCTGAAAGGGACCAATGCAAAGGTTAAGCCAGGACTCACCACCTaGACTGATGCCTCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: CRYSHCCSSLKGTNAKVKPGLTT*TDASQN
Trigger: ATTCTGAGAGGCATCAGTCAAGGTGGTGAGTCCTGG...CTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CAA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGAAGGAGGAGAATCGCTaGAACCCAGGAGGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKKEENR*NPGGGG
Trigger: ACCTCCCCCTCCTGGGTTCAAGCGATTCTCCTCCTT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CAA 90 bp TGCAGATACAGCCACTGTTGTTCAAGCCTGAAAGGGACCAATGCAAAGGTTAAGGAAACTCAAATTAGGTaGGAGGCTGGGCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: CRYSHCCSSLKGTNAKVKETQIR*EAGHSG
Trigger: GCCACTGTGCCCAGCCTCCAACCTAATTTGAGTTTC...CTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS CCA 90 bp GAAGGTTTCACAGTGGGAGTAAGACCCTGGAAGACACGCACTATTTaGGCAGATGAAGAAGGTATTCCAGATGTAGGCAGCAGCATGAAA +
Preference number: 5 (lower is better)
Translates to: EGFTVGVRPWKTRTI*ADEEGIPDVGSSMK
Trigger: TTTCATGCTGCTGCCTACATCTGGAATACCTTCTTCATCTGCCCAAATAGTGCGTGTCTTCCAGGGTCTTACTCCCACTGTGAAACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CAA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGACTCCTGAGGCCAAGTaGTTTGGAGCATGGCGGATG +
Preference number: 5 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKTPEAK*FGAWRM
Trigger: CATCCGCCATGCTCCAAACAACTTGGCCTCAGGAGT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000403205.6
CDS-3UTR CAA 90 bp TCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCCAGGACTCACCACCTaGACTGATGCCTCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: SRRFSSYFVQNNHYGSHSPGLTT*TDASQN
Trigger: ATTCTGAGAGGCATCAGTCAAGGTGGTGAGTCCTGG...GCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp CAGAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATAGATGGCCCAAGGACCTaGACTGGCTTCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: QNPKPVFPRSPCNLDIHIDGPRT*TGFFST
Trigger: TGTGGAGAAGAAGCCAGTCAAGGTCCTTGGGCCATC...TATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGGATGGCCCAAGGACCTaGACTGGCTTCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKDGPRT*TGFFST
Trigger: TGTGGAGAAGAAGCCAGTCAAGGTCCTTGGGCCATC...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CAA 90 bp AATACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCAGATACAGCCACTGTaGTTCAAGCCTGAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: NTPPSHGPTKQSPLISTVQIQPL*FKPERD
Trigger: GTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTG...GACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CAA 90 bp TGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAGACCATGGCACTGATAGTCTaGCTCAACACAGGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: CSGLGFGLREFVVGLIQTMALIV*LNTGLP
Trigger: TGGCAGGCCTGTGTTGAGCAAGACTATCAGTGCCAT...GGTCTGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCTGAGGCCAAGTTGTTaGGAGCATGGCGGATGTCCC +
Preference number: 5 (lower is better)
Translates to: FLSERFICSMCCCWIAFYLRPSC*EHGGCP
Trigger: GGGACATCCGCCATGCTCCAAACAACTTGGCCTCAG...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTACTCCTGAGGCCAAGTaGTTTGGAGCATGGCGGATG +
Preference number: 5 (lower is better)
Translates to: FICSMCCCWIAFYPQWNITPEAK*FGAWRM
Trigger: CATCCGCCATGCTCCAAACAACTTGGCCTCAGGAGT...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGCCAGGACTCACCACCTaGACTGATGCCTCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKPGLTT*TDASQN
Trigger: ATTCTGAGAGGCATCAGTCAAGGTGGTGAGTCCTGG...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CAA 90 bp TATGTTTCTCCCAGGCTGCTTATCTCTAATCATAATGGCCTAATACAGGGATATAAGGAGGAGAATCGCTaGAACCCAGGAGGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: YVSPRLLISNHNGLIQGYKEENR*NPGGGG
Trigger: ACCTCCCCCTCCTGGGTTCAAGCGATTCTCCTCCTT...ATATCCCTGTATTAGGCCATTATGATTAGAGATAAGCAGCCTGGGAGAAACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CAA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGGAAACTCAAATTAGGTaGGAGGCTGGGCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKETQIR*EAGHSG
Trigger: GCCACTGTGCCCAGCCTCCAACCTAATTTGAGTTTC...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CAA 90 bp TCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCAGATACAGCCACTGTaGTTCAAGCCTGAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: SRRFSSYFVQNNHYGSHSQIQPL*FKPERD
Trigger: GTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTG...GCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp ACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCATACTGAGAGGGATGCTTaGGAAGTTACAGAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: TPPSHGPTKQSPLISTVHTERDA*EVTEER
Trigger: TCTCTCTTCTGTAACTTCCAAAGCATCCCTCTCAGT...ATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp TGGTCTAATTTCAATACTGTTGTGTCTGAGAGAATAGTGAGGTCTGAGGAGAGGAGGCAAGAGAATCACTaGAACCCGGGAGGTGTAGGT +
Preference number: 5 (lower is better)
Translates to: WSNFNTVVSERIVRSEERRQENH*NPGGVG
Trigger: ACCTACACCTCCCGGGTTCAAGTGATTCTCTTGCCT...CCTCTCCTCAGACCTCACTATTCTCTCAGACACAACAGTATTGAAATTAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp TTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACAGGTCTTGTATGTTTCGCTACTGAGGCCAAGTaGTTTGGAGCATGGCGGATG +
Preference number: 5 (lower is better)
Translates to: LLEAYSNSLPVATGLVCFATEAK*FGAWRM
Trigger: CATCCGCCATGCTCCAAACAACTTGGCCTCAGTAGC...GAAACATACAAGACCTGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431278.5
CDS-3UTR CAA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACACTCCTGAGGCCAAGTaGTTTGGAGCATGGCGGATG +
Preference number: 5 (lower is better)
Translates to: FLSERFICSMCCCWIAFYTPEAK*FGAWRM
Trigger: CATCCGCCATGCTCCAAACAACTTGGCCTCAGGAGT...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp CCCACTAAACAATCTCCATTAATCTCTACAGTCCATTGTTGGAAGCTTATTCCAGATGGCCCAAGGACCTaGACTGGCTTCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: PTKQSPLISTVHCWKLIPDGPRT*TGFFST
Trigger: TGTGGAGAAGAAGCCAGTCAAGGTCCTTGGGCCATC...TGGAATAAGCTTCCAACAATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CAA 90 bp TGGTCTAATTTCAATACTGTTGTGTCTGAGAGAATAGTGAGGTCTGAGGAGAGGGCTACTCTGTGTCCTTaGCCTCTCTATACACACACC +
Preference number: 5 (lower is better)
Translates to: WSNFNTVVSERIVRSEERATLCP*PLYTHT
Trigger: GGTGTGTGTATAGAGAGGCAAAGGACACAGAGTAGC...CCTCTCCTCAGACCTCACTATTCTCTCAGACACAACAGTATTGAAATTAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp TATGTTTCTCCCAGGCTGCTTATCTCTAATCATAATGGCCTAATACAGGGATATAGGTGGGTGGATCACTaGAGGCTGCCAGGAGTTCAA +
Preference number: 5 (lower is better)
Translates to: YVSPRLLISNHNGLIQGYRWVDH*RLPGVQ
Trigger: TTGAACTCCTGGCAGCCTCAAGTGATCCACCCACCT...ATATCCCTGTATTAGGCCATTATGATTAGAGATAAGCAGCCTGGGAGAAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTCCAGGACTCACCACCTaGACTGATGCCTCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVPGLTT*TDASQN
Trigger: ATTCTGAGAGGCATCAGTCAAGGTGGTGAGTCCTGG...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGACTAGCCCTTCATTTTaGATCCAGGACTCACCACCT +
Preference number: 5 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKTSPSF*IQDSPP
Trigger: AGGTGGTGAGTCCTGGATCAAAAATGAAGGGCTAGT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CAA 90 bp ACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCATAGATTTGGATTTAGATaGAAAGTCTGCTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: TPPSHGPTKQSPLISTVHRFGFR*KVCFSA
Trigger: GGCACTGAAGCAGACTTTCAATCTAAATCCAAATCT...ATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CAA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAATTCAGTGAGTCTTTGTaGCTGGAAGACAGTCTTGCC +
Preference number: 5 (lower is better)
Translates to: GFQVTLYRTTTMAATALQFSESL*LEDSLA
Trigger: GGCAAGACTGTCTTCCAGCAACAAAGACTCACTGAA...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp TGCAGATACAGCCACTGTTGTTCAAGCCTGAAAGGGACCAATGCAAAGGTTAAGCAGATTCCCCTCGAGTaGGCTTTACACCATTATTTT +
Preference number: 5 (lower is better)
Translates to: CRYSHCCSSLKGTNAKVKQIPLE*ALHHYF
Trigger: AAAATAATGGTGTAAAGCCAACTCGAGGGGAATCTG...CTTAACCTTTGCATTGGTCCCTTTCAGGCTTGAACAACAGTGGCTGTATCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp ACCCCACCTAGCCATGGGCCCACTAAACAATCTCCATTAATCTCTACAGTCCATGTGGGCATTTTCTGTTaGAAGCATATCTCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: TPPSHGPTKQSPLISTVHVGIFC*KHISQS
Trigger: ACTTTGAGAGATATGCTTCAAACAGAAAATGCCCAC...ATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGGCCCATGGCTAGGTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp TTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGGCCTATCTCAGCTGTaGACATTAGCCTTCCTCACT +
Preference number: 5 (lower is better)
Translates to: FPEGFQVTLYRTTTMAATGLSQL*TLAFLT
Trigger: AGTGAGGAAGGCTAATGTCAACAGCTGAGATAGGCC...TGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp GAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATATATTCAGTGAGTCTTTGTaGCTGGAAGACAGTCTTGCC +
Preference number: 5 (lower is better)
Translates to: ESKTCISQKPLQLGHTYIFSESL*LEDSLA
Trigger: GGCAAGACTGTCTTCCAGCAACAAAGACTCACTGAA...TATATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAGTCTTCAGTGAGTCTTaGTTGCTGGAAGACAGTCTT +
Preference number: 5 (lower is better)
Translates to: GFQVTLYRTTTMAATALQVFSES*LLEDSL
Trigger: AAGACTGTCTTCCAGCAACAAAGACTCACTGAAGAC...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp AGCAGACATAAAAACATTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTGGAAACTCAAATTAGGTaGGAGGCTGGGCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: SRHKNINLFVHLHQNSWVETQIR*EAGHSG
Trigger: GCCACTGTGCCCAGCCTCCAACCTAATTTGAGTTTC...CACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp AATCTCTACAGTCCATTGTTGGAAGCTTATTCCAATTCTCTACCAGTAGCCACACACTTGGTTCTGTGGTaGGTCATTTTTCCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: NLYSPLLEAYSNSLPVATHLVLW*VIFPGF
Trigger: GAAGCCAGGAAAAATGACCAACCACAGAACCAAGTG...TGTGGCTACTGGTAGAGAATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCAATTGGCAGGCAGCACTaGGGACTGGATTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPIGRQH*GLDSWD
Trigger: ATCCCAGGAATCCAGTCCCAAGTGCTGCCTGCCAAT...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp TGCTCTGGATTAGGTTTTGGCTTAAGGGAATTTGTGGTTGGTTTGATCCAGACCTTTTGCATTCACAACTaGACTGTTTGGCAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: CSGLGFGLREFVVGLIQTFCIHN*TVWQKQ
Trigger: CTGCTTCTGCCAAACAGTCAAGTTGTGAATGCAAAA...GGTCTGGATCAAACCAACCACAAATTCCCTTAAGCCAAAACCTAATCCAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTACTAGCCCTTCATTTTaGATCCAGGACTCACCACCT +
Preference number: 5 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVTSPSF*IQDSPP
Trigger: AGGTGGTGAGTCCTGGATCAAAAATGAAGGGCTAGT...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp GTAGTTTCCATCTCAAGAAACCACTTTTGTGGCTCTTATATTAGAAGCAACTCCACTAGCCCTTCATTTTaGATCCAGGACTCACCACCT +
Preference number: 5 (lower is better)
Translates to: VVSISRNHFCGSYIRSNSTSPSF*IQDSPP
Trigger: AGGTGGTGAGTCCTGGATCAAAAATGAAGGGCTAGT...GGAGTTGCTTCTAATATAAGAGCCACAAAAGTGGTTTCTTGAGATGGAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTGTCTTCAGTGAGTCTTaGTTGCTGGAAGACAGTCTT +
Preference number: 5 (lower is better)
Translates to: FICSMCCCWIAFYPQWNIVFSES*LLEDSL
Trigger: AAGACTGTCTTCCAGCAACAAAGACTCACTGAAGAC...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp CTAGTTATCTTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTGGAGATATTGCAGGTTaGCTTCCAGACAACTGTAAT +
Preference number: 5 (lower is better)
Translates to: LVILLFPPHLQLLRPLKSGDIAG*LPDNCN
Trigger: ATTACAGTTGTCTGGAAGCAAACCTGCAATATCTCC...AGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAGATAACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp CAGAATCCAAAACCTGTATTTCCCAGAAGCCCCTGCAACTTGGACATACATATAGGAGATATTGCAGGTTaGCTTCCAGACAACTGTAAT +
Preference number: 5 (lower is better)
Translates to: QNPKPVFPRSPCNLDIHIGDIAG*LPDNCN
Trigger: ATTACAGTTGTCTGGAAGCAAACCTGCAATATCTCC...TATATGTATGTCCAAGTTGCAGGGGCTTCTGGGAAATACAGGTTTTGGATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAACATATCTTGGAGATATaGCAGGTTTGCTTCCAGACA +
Preference number: 5 (lower is better)
Translates to: GFQVTLYRTTTMAATALQHILEI*QVCFQT
Trigger: TGTCTGGAAGCAAACCTGCAATATCTCCAAGATATG...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTTTCCACTGGAACCACTaGGTTCTGTGGTTGGTCATT +
Preference number: 5 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVFHWNH*VLWLVI
Trigger: AATGACCAACCACAGAACCAAGTGGTTCCAGTGGAA...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp GGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCCTTACAAAGATTTGGATTTAGATaGAAAGTCTGCTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: GFQVTLYRTTTMAATALQRFGFR*KVCFSA
Trigger: GGCACTGAAGCAGACTTTCAATCTAAATCCAAATCT...TTGTAAGGCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGAGATTTGGATTTAGATaGAAAGTCTGCTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKRFGFR*KVCFSA
Trigger: GGCACTGAAGCAGACTTTCAATCTAAATCCAAATCT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS-3UTR CAA 90 bp CTAGTTATCTTGCTATTTCCACCACATCTGCAGTTACTTCGTCCACTGAAGTCTAAATACAGGCATATCTaGGAGATATTGCAGGTTTGC +
Preference number: 5 (lower is better)
Translates to: LVILLFPPHLQLLRPLKSKYRHI*EILQVC
Trigger: GCAAACCTGCAATATCTCCAAGATATGCCTGTATTT...AGACTTCAGTGGACGAAGTAACTGCAGATGTGGTGGAAATAGCAAGATAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGCTCTACAGTCCATTGTaGGAAGCTTATTCCAATTCT +
Preference number: 5 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKLYSPL*EAYSNS
Trigger: AGAATTGGAATAAGCTTCCAACAATGGACTGTAGAG...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CAA 90 bp TCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGCAGCCAAAATCAGAATTaGTGCAAGAGAGAAAACTCT +
Preference number: 5 (lower is better)
Translates to: SRRFSSYFVQNNHYGSHSSQNQN*CKRENS
Trigger: AGAGTTTTCTCTCTTGCACAAATTCTGATTTTGGCT...GCTGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp CCCACTAAACAATCTCCATTAATCTCTACAGTCCATTGTTGGAAGCTTATTCCACCTTCCGAACTCAAGTaGGCTCCATATGTTCTCATT +
Preference number: 5 (lower is better)
Translates to: PTKQSPLISTVHCWKLIPPSELK*APYVLI
Trigger: AATGAGAACATATGGAGCCAACTTGAGTTCGGAAGG...TGGAATAAGCTTCCAACAATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp TTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCCACAGTGGAACATTAGATTTGGATTTAGATaGAAAGTCTGCTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: FICSMCCCWIAFYPQWNIRFGFR*KVCFSA
Trigger: GGCACTGAAGCAGACTTTCAATCTAAATCCAAATCT...AATGTTCCACTGTGGGTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp AAATTAGGCTGGAGATTTGCTAGGCATAAGAGCCGTAAGACTGCCAAGATAAAGAATCTCTACAGTCCATaGTTGGAAGCTTATTCCAAT +
Preference number: 5 (lower is better)
Translates to: KLGWRFARHKSRKTAKIKNLYSP*LEAYSN
Trigger: ATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT...CTTTATCTTGGCAGTCTTACGGCTCTTATGCCTAGCAAATCTCCAGCCTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CAA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACGAATTTGTGGTTGGTTaGATCCAGACCCCTAAAACT +
Preference number: 5 (lower is better)
Translates to: FLSERFICSMCCCWIAFYEFVVG*IQTPKT
Trigger: AGTTTTAGGGGTCTGGATCAAACCAACCACAAATTC...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp TTCCTTTCCGAAAGATTTATCTGTAGCATGTGTTGCTGTTGGATAGCCTTTTACCTAGATCTGGATAAATaGCTACAGCTTCTACACCAG +
Preference number: 5 (lower is better)
Translates to: FLSERFICSMCCCWIAFYLDLDK*LQLLHQ
Trigger: CTGGTGTAGAAGCTGTAGCAATTTATCCAGATCTAG...GTAAAAGGCTATCCAACAGCAACACATGCTACAGATAAATCTTTCGGAAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp TTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCACTATGGCAGCCACAGGTTTTCAAGTTACTTaGTACAGAACAACCACTATG +
Preference number: 5 (lower is better)
Translates to: FPEGFQVTLYRTTTMAATGFQVT*YRTTTM
Trigger: CATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC...TGTGGCTGCCATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTCTAAGTCTAGTTATCTaGCTATTTCCACCACATCTG +
Preference number: 5 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVLSLVI*LFPPHL
Trigger: CAGATGTGGTGGAAATAGCAAGATAACTAGACTTAG...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp GTAGTTTCCATCTCAAGAAACCACTTTTGTGGCTCTTATATTAGAAGCAACTCCCTAAGTCTAGTTATCTaGCTATTTCCACCACATCTG +
Preference number: 5 (lower is better)
Translates to: VVSISRNHFCGSYIRSNSLSLVI*LFPPHL
Trigger: CAGATGTGGTGGAAATAGCAAGATAACTAGACTTAG...GGAGTTGCTTCTAATATAAGAGCCACAAAAGTGGTTTCTTGAGATGGAAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp AGCAGACATAAAAACATTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTGCATATCTTGGAGATATaGCAGGTTTGCTTCCAGACA +
Preference number: 5 (lower is better)
Translates to: SRHKNINLFVHLHQNSWVHILEI*QVCFQT
Trigger: TGTCTGGAAGCAAACCTGCAATATCTCCAAGATATG...CACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp ACAGTGGAACATTCTTCAAAATTGAAGTCAATCCTCTCAAACTCTGCTGCTGTTAAATACAGGCATATCTaGGAGATATTGCAGGTTTGC +
Preference number: 5 (lower is better)
Translates to: TVEHSSKLKSILSNSAAVKYRHI*EILQVC
Trigger: GCAAACCTGCAATATCTCCAAGATATGCCTGTATTT...AACAGCAGCAGAGTTTGAGAGGATTGACTTCAATTTTGAAGAATGTTCCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS-3UTR CAA 90 bp AGCAGACATAAAAACATTAATCTCTTTGTACATCTCCATCAGAACTCTTGGGTGCTCTACAGTCCATTGTaGGAAGCTTATTCCAATTCT +
Preference number: 5 (lower is better)
Translates to: SRHKNINLFVHLHQNSWVLYSPL*EAYSNS
Trigger: AGAATTGGAATAAGCTTCCAACAATGGACTGTAGAG...CACCCAAGAGTTCTGATGGAGATGTACAAAGAGATTAATGTTTTTATGTCTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339296.10
CDS-3UTR CAA 90 bp CCCACTAAACAATCTCCATTAATCTCTACAGTCCATTGTTGGAAGCTTATTCCAAATCTCTACAGTCCATaGTTGGAAGCTTATTCCAAT +
Preference number: 5 (lower is better)
Translates to: PTKQSPLISTVHCWKLIPNLYSP*LEAYSN
Trigger: ATTGGAATAAGCTTCCAACAATGGACTGTAGAGATT...TGGAATAAGCTTCCAACAATGGACTGTAGAGATTAATGGAGATTGTTTAGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339296.10
ENST00000431278.5
CDS-3UTR CAA 90 bp AGAATGATGAATCCTTTCCAGAAGGTTTTCAAGTTACTTTGTACAGAACAACCAGGTTTTCAAGTTACTTaGTACAGAACAACCACTATG +
Preference number: 5 (lower is better)
Translates to: RMMNPFQKVFKLLCTEQPGFQVT*YRTTTM
Trigger: CATAGTGGTTGTTCTGTACAAAGTAACTTGAAAACC...TGGTTGTTCTGTACAAAGTAACTTGAAAACCTTCTGGAAAGGATTCATCATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310898.5
ENST00000339296.10
CDS CAA 72 bp GGCTGGACACGGGCTCTAGAAGCCCGAGCAGCCACCTaGACGGCTTCGGCGAGGCCCAGATGCCCACGGTCC +
Preference number: 6 (lower is better)
Translates to: GWTRALEARAAT*TASARPRCPRS
Trigger: GGACCGTGGGCATCTGGGCCTCGCCGAAGCCGTCAAGGTGGCTGCTCGGGCTTCTAGAGCCCGTGTCCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310898.5
ENST00000339296.10
ENST00000431278.5
ENST00000490457.5
CDS TCA 72 bp AGCCGGCACCGGGCGGACCTGGCACGTAGAACTCGCTaGAACCCACGCTCTGCAGAACGCCGAGGAGCTGGT +
Preference number: 6 (lower is better)
Translates to: SRHRADLARRTR*NPRSAERRGAG
Trigger: ACCAGCTCCTCGGCGTTCTGCAGAGCGTGGGTTTCAGCGAGTTCTACGTGCCAGGTCCGCCCGGTGCCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310898.5
ENST00000339296.10
ENST00000431278.5
ENST00000490457.5
CDS CCA 72 bp TCGCTGAAACCCACGCTCTGCAGAACGCCGAGGAGCTaGTCACTAACTAAAGGCCGAGCCGGAAGGGCGAGT +
Preference number: 6 (lower is better)
Translates to: SLKPTLCRTPRS*SLTKGRAGRAS
Trigger: ACTCGCCCTTCCGGCTCGGCCTTTAGTTAGTGACCAGCTCCTCGGCGTTCTGCAGAGCGTGGGTTTCAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310898.5
ENST00000403205.6
ENST00000431278.5
CDS TCA 72 bp AAGCAAGATCCTCAAGAGCTGGCACGTAGAACTCGCTaGAACCCACGCTCTGCAGAACGCCGAGGAGCTGGT +
Preference number: 6 (lower is better)
Translates to: KQDPQELARRTR*NPRSAERRGAG
Trigger: ACCAGCTCCTCGGCGTTCTGCAGAGCGTGGGTTTCAGCGAGTTCTACGTGCCAGCTCTTGAGGATCTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403205.6
CDS CCA 72 bp CTGGGGACTGACCAGGGATGGCCCAAGGACCTTGACTaGCTTCTTCTCCACAGGGTGCAATTTCTGATGCTG +
Preference number: 6 (lower is better)
Translates to: LGTDQGWPKDLD*LLLHRVQFLML
Trigger: CAGCATCAGAAATTGCACCCTGTGGAGAAGAAGCCAGTCAAGGTCCTTGGGCCATCCCTGGTCAGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
ENST00000492098.1
CDS CCA 72 bp ACAGTGGGAGTAAGACCCTGGAAGACACGCACTATTTaGGCAGATGAAGAAGGTATTCCAGATGTAGGCAGC +
Preference number: 6 (lower is better)
Translates to: TVGVRPWKTRTI*ADEEGIPDVGS
Trigger: GCTGCCTACATCTGGAATACCTTCTTCATCTGCCCAAATAGTGCGTGTCTTCCAGGGTCTTACTCCCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339296.10
ENST00000403205.6
ENST00000431278.5
CDS TCA 72 bp GTATTTCTGGAGGCTGCTGATTGCAAAACTCTCCTCTaGAGTCATCAAACCCAAGGGCTACTAGAATCCCCA +
Preference number: 6 (lower is better)
Translates to: VFLEAADCKTLL*SHQTQGLLESP
Trigger: TGGGGATTCTAGTAGCCCTTGGGTTTGATGACTTCAGAGGAGAGTTTTGCAATCAGCAGCCTCCAGAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462161.5
CDS TCA 72 bp GGGAATGGAAACGCTACCAGTATTTCTGGAGGCTGCTaGTTGCAAAACTCTCCTCTGAAGTCATCAAACCCA +
Preference number: 6 (lower is better)
Translates to: GNGNATSISGGC*LQNSPLKSSNP
Trigger: TGGGTTTGATGACTTCAGAGGAGAGTTTTGCAATCAGCAGCCTCCAGAAATACTGGTAGCGTTTCCATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462161.5