RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF619 (Homo sapiens)

Ensembl gene IDs: ENSG00000177873

Ensembl transcript IDs: ENST00000314686.9, ENST00000429348.6, ENST00000432264.4, ENST00000447116.6, ENST00000456778.5, ENST00000462961.5, ENST00000494154.6, ENST00000520737.5, ENST00000522736.5

Found 355 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCATGTAGCTGTGACTTCTCTAACCTGTCCTTGAAGTCAGGGTGCTaGGGAACGTCCATCAGCAGTCCCTCCACTATCAGTCTGTGGGAC +
Preference number: 1 (lower is better)
Translates to: SCSCDFSNLSLKSGC*GTSISSPSTISLWD
Trigger: GTCCCACAGACTGATAGTGGAGGGACTGCTGATGGACGTTCCCCAGCACCCTGACTTCAAGGACAGGTTAGAGAAGTCACAGCTACATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR TCA 90 bp AATATAAAGGTGCAGGCATCTGGTAAGGGCTTACTTGCTGCATCATaGCATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTG +
Preference number: 1 (lower is better)
Translates to: NIKVQASGKGLLAAS*HGRRHQKARQSKHV
Trigger: CACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCATGATGCAGCAAGTAAGCCCTTACCAGATGCCTGCACCTTTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR TCA 90 bp GGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTaGGGTGCAAAGGATTTTGAGAACGTGACGGGGCTTACAGGGAGT +
Preference number: 1 (lower is better)
Translates to: GISIDTIRRPVESLT*GAKDFENVTGLTGS
Trigger: ACTCCCTGTAAGCCCCGTCACGTTCTCAAAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR CCA 90 bp AACTCATCAGGAATGGACTCACTTCTGAGAAACTACAGCAAGTCATaGTCAGGTTTCTCTTCTTTGCCTCTGGTGCTCACCAGTGTGATG +
Preference number: 1 (lower is better)
Translates to: NSSGMDSLLRNYSKS*SGFSSLPLVLTSVM
Trigger: CATCACACTGGTGAGCACCAGAGGCAAAGAAGAGAAACCTGACCATGACTTGCTGTAGTTTCTCAGAAGTGAGTCCATTCCTGATGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR TCA 90 bp TATCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTaGGAAACTACAGCAAGTCATGGTCAGGTTTCTCTTCTTTGCCTC +
Preference number: 1 (lower is better)
Translates to: YPRACIVTHQEWTHF*ETTASHGQVSLLCL
Trigger: GAGGCAAAGAAGAGAAACCTGACCATGACTTGCTGTAGTTTCTCAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR TCA 90 bp AGTCATGGTCAGGTTTCTCTTCTTTGCCTCTGGTGCTCACCAGTGTaGTGCCAACAAGTTCCATCCATGTACAGCTTTAGAGATTACTAT +
Preference number: 1 (lower is better)
Translates to: SHGQVSLLCLWCSPV*CQQVPSMYSFRDYY
Trigger: ATAGTAATCTCTAAAGCTGTACATGGATGGAACTTGTTGGCATCACACTGGTGAGCACCAGAGGCAAAGAAGAGAAACCTGACCATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR GCA 90 bp CCCTTTCAGTGGTGGAAGATTCATGATCCTGGACTGTCAAATCTGTaGAATCCCCTATCTTTGTTTTATTCCCTGTATCATGTAGCTGTG +
Preference number: 1 (lower is better)
Translates to: PFQWWKIHDPGLSNL*NPLSLFYSLYHVAV
Trigger: CACAGCTACATGATACAGGGAATAAAACAAAGATAGGGGATTGCACAGATTTGACAGTCCAGGATCATGAATCTTCCACCACTGAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR GCA 90 bp GAACTCTCTGATGCAGGTGAAAGTCTGAATGTGGGTTGTAGTAACTaGCACACTCACCACATTTATAAAACACCTGTTCTTTGGCAAAAC +
Preference number: 1 (lower is better)
Translates to: ELSDAGESLNVGCSN*HTHHIYKTPVLWQN
Trigger: GTTTTGCCAAAGAACAGGTGTTTTATAAATGTGGTGAGTGTGGCAGTTACTACAACCCACATTCAGACTTTCACCTGCATCAGAGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR-3UTR GCA 90 bp GAGGGAGGAAGTACCACTGCATGTGAAGAAGATAAGGGAGGCCCTGGTGGGGCTTCCTTGAAGTCAGGGTaGTGGGGAACGTCCATCAGC +
Preference number: 2 (lower is better)
Translates to: EGGSTTACEEDKGGPGGASLKSG*WGTSIS
Trigger: GCTGATGGACGTTCCCCAGCACCCTGACTTCAAGGA...AGCCCCACCAGGGCCTCCCTTATCTTCTTCACATGCAGTGGTACTTCCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR-3UTR CCA 90 bp CCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCCATCATGGAGAGCCCTCTGAGAAACTaGGAGGCTGCACTACCTCCC +
Preference number: 2 (lower is better)
Translates to: PSSSCSSSPHKATSPIMESPLRN*EAALPP
Trigger: GGGAGGTAGTGCAGCCTCCCAGTTTCTCAGAGGGCT...CTCCATGATGGGACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR CAA 90 bp TGGTTCCGAGGGCTGGGAACTGTGGAGGGGCCGTATCTGGCCTTCTaGCTGTGTCATAACATGATGGAAAGCATCACATGGCAAGATGGC +
Preference number: 2 (lower is better)
Translates to: WFRGLGTVEGPYLAF*LCHNMMESITWQDG
Trigger: GCCATCTTGCCATGTGATGCTTTCCATCATGTTATGACACAGCAAGAAGGCCAGATACGGCCCCTCCACAGTTCCCAGCCCTCGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432264.4
3UTR-3UTR CCA 90 bp CAAGCATGTGTCCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCAGCCCTCTGAGAAACTaGGAGGCTGCACTACCTCCC +
Preference number: 2 (lower is better)
Translates to: QACVPVPVALPLLIKPPVSPLRN*EAALPP
Trigger: GGGAGGTAGTGCAGCCTCCCAGTTTCTCAGAGGGCT...GACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGGACACATGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR TCA 90 bp GAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGGGCATGAGAATCACTTaGACCCTGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: EDISKGLHSNSSGMDSLLGMRIT*TLEAEV
Trigger: AACCTCTGCCTCCAGGGTTCAAGTGATTCTCATGCC...CAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR TCA 90 bp GAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGTGGTGCTCACCAGTGTaGTGCCAACAAGTTCCATCC +
Preference number: 2 (lower is better)
Translates to: EDISKGLHSNSSGMDSLLWCSPV*CQQVPS
Trigger: GGATGGAACTTGTTGGCATCACACTGGTGAGCACCA...CAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR CCA 90 bp GTCTCCCTTCCTCTTCTTATAAAGCCATCAGTCCCATCATATGGGCACCAACCCTGTAATCCCAGCACTTaGGAGACTGAGGCAGGTGAA +
Preference number: 2 (lower is better)
Translates to: VSLPLLIKPSVPSYGHQPCNPST*ETEAGE
Trigger: TTCACCTGCCTCAGTCTCCCAAGTGCTGGGATTACA...GGGTTGGTGCCCATATGATGGGACTGATGGCTTTATAAGAAGAGGAAGGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432264.4
3UTR-3UTR CCA 90 bp AACTACAGCAAGTCATGGTCAGGTTTCTCTTCTTTGCCTCTGGTGCTCACCAGTCCCTGGTCCACCAAATaGCCCTCCTTAACTCCTGAA +
Preference number: 2 (lower is better)
Translates to: NYSKSWSGFSSLPLVLTSPWSTK*PSLTPE
Trigger: TTCAGGAGTTAAGGAGGGCCATTTGGTGGACCAGGG...ACTGGTGAGCACCAGAGGCAAAGAAGAGAAACCTGACCATGACTTGCTGTAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR CCA 90 bp TCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAAAAAATTAGCTGGGTGTaGTGGTGTATGCCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: SGVGVRTYPRACIVTHQEKISWV*WCMPPG
Trigger: CCCTGGGGGCATACACCACCACACCCAGCTAATTTT...TTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR GCA 90 bp TCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAAGCCCCAGAAGAGAGATaGAGACTGATAATACAGCCC +
Preference number: 2 (lower is better)
Translates to: SGVGVRTYPRACIVTHQEAPEER*RLIIQP
Trigger: GGGCTGTATTATCAGTCTGCATCTCTCTTCTGGGGC...TTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR CCA 90 bp GAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGCCACTGCAAACAGCCTaGGTGACAAGAGTGAAACTC +
Preference number: 2 (lower is better)
Translates to: EDISKGLHSNSSGMDSLLPLQTA*VTRVKL
Trigger: GAGTTTCACTCTTGTCACCCAGGCTGTTTGCAGTGG...CAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR CCA 90 bp TCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAATGTAATCCCAGCACTTaGGAGACTGAGGCAGGTGAA +
Preference number: 2 (lower is better)
Translates to: SGVGVRTYPRACIVTHQECNPST*ETEAGE
Trigger: TTCACCTGCCTCAGTCTCCCAAGTGCTGGGATTACA...TTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR CCA 90 bp TCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGAGAAACTACCCCTGGTCCACCAAATaGCCCTCCTTAACTCCTGAA +
Preference number: 2 (lower is better)
Translates to: SKGLHSNSSGMDSLLRNYPWSTK*PSLTPE
Trigger: TTCAGGAGTTAAGGAGGGCCATTTGGTGGACCAGGG...GTAGTTTCTCAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR CAA 90 bp TCACTTCTGAGAAACTACAGCAAGTCATGGTCAGGTTTCTCTTCTTaGCCTCTGGTGCTCACCAGTGTGATGCCAACAAGTTCCATCCAT +
Preference number: 2 (lower is better)
Translates to: SLLRNYSKSWSGFSS*PLVLTSVMPTSSIH
Trigger: ATGGATGGAACTTGTTGGCATCACACTGGTGAGCACCAGAGGCAAAGAAGAGAAACCTGACCATGACTTGCTGTAGTTTCTCAGAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR TCA 90 bp TCTGGTGCTCACCAGTGTGATGCCAACAAGTTCCATCCATGTACAGCTTTAGAGGTGGAATCCCTAACTTaGGGTGCAAAGGATTTTGAG +
Preference number: 2 (lower is better)
Translates to: SGAHQCDANKFHPCTALEVESLT*GAKDFE
Trigger: CTCAAAATCCTTTGCACCTCAAGTTAGGGATTCCAC...CTCTAAAGCTGTACATGGATGGAACTTGTTGGCATCACACTGGTGAGCACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR GCA 90 bp AGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACTGAAAGGGTGTGGTGGTGTATaGCCCCAGGGCTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: RVQVQVTFCTYIYEWVLKGCGGV*PQGSSN
Trigger: ATTGCTTGAGCCCTGGGGGCATACACCACCACACCC...TTTCAGTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR CCA 90 bp AAAATTAGCTGGGTGTGGTGGTGTATGCCCCCAGGGCTCAAGCAATCCTCCCACGAAACTAATCAAACATaGTCCTTAAGCGTGAGAATT +
Preference number: 2 (lower is better)
Translates to: KISWVWWCMPPGLKQSSHETNQT*SLSVRI
Trigger: AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTC...GTGGGAGGATTGCTTGAGCCCTGGGGGCATACACCACCACACCCAGCTAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR TCA 90 bp AGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACTGAAAGCCCTCCTTAACTCCTaGAAGCAGGCCAGATGCAGT +
Preference number: 2 (lower is better)
Translates to: RVQVQVTFCTYIYEWVLKALLNS*KQARCS
Trigger: ACTGCATCTGGCCTGCTTTCAGGAGTTAAGGAGGGC...TTTCAGTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR TCA 90 bp TCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAAAGAAGGAACCCAAATTaGAAAACCATATCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: SGVGVRTYPRACIVTHQERRNPN*KTISPS
Trigger: GGAAGGGGATATGGTTTTTCAATTTGGGTTCCTTCT...TTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR TCA 90 bp TCTGGTGCTCACCAGTGTGATGCCAACAAGTTCCATCCATGTACAGCTTTAGAGAGAAGGAACCCAAATTaGAAAACCATATCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: SGAHQCDANKFHPCTALERRNPN*KTISPS
Trigger: GGAAGGGGATATGGTTTTTCAATTTGGGTTCCTTCT...CTCTAAAGCTGTACATGGATGGAACTTGTTGGCATCACACTGGTGAGCACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR TCA 90 bp GGGAAATCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATGAATGGACTCACTTCTaGGAAACTACAGCAAGTCAT +
Preference number: 2 (lower is better)
Translates to: GKSGVGVRTYPRACIVTHEWTHF*ETTASH
Trigger: ATGACTTGCTGTAGTTTCTCAGAAGTGAGTCCATTC...ATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGATTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR CCA 90 bp CAACAAGTTCCATCCATGTACAGCTTTAGAGATTACTATACTCAGGCATCTACCAAAATTAGCTGGGTGTaGTGGTGTATGCCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: QQVPSMYSFRDYYTQASTKISWV*WCMPPG
Trigger: CCCTGGGGGCATACACCACCACACCCAGCTAATTTT...GGTAGATGCCTGAGTATAGTAATCTCTAAAGCTGTACATGGATGGAACTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR TCA 90 bp AGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACTGAAACTTACATTCTTTCAGTaGGCCTTGCCCCTGGTCCAC +
Preference number: 2 (lower is better)
Translates to: RVQVQVTFCTYIYEWVLKLTFFQ*ALPLVH
Trigger: GTGGACCAGGGGCAAGGCTCACTGAAAGAATGTAAG...TTTCAGTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR TCA 90 bp ATCATGACATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTGTCCCAGAAATTCAACAGATATaGAAAGGAATAGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: IMTWQEASKGKTEQACVPEIQQI*KGIEAG
Trigger: TCCAGCCTCTATTCCTTTTCATATCTGTTGAATTTC...TGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR CAA 90 bp CACTATATTATATGGATCATCATAAAGGTCTGTATCCTTGTCATTTaGTTAAGCAGGCTGAGAAGGGGAGAGGAGGGAGACTGGTCTTGC +
Preference number: 2 (lower is better)
Translates to: HYIIWIIIKVCILVI*LSRLRRGEEGDWSC
Trigger: GCAAGACCAGTCTCCCTCCTCTCCCCTTCTCAGCCTGCTTAACAAAATGACAAGGATACAGACCTTTATGATGATCCATATAATATAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432264.4
3UTR-3UTR GCA 90 bp AGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACTGAAAGCCCCAGAAGAGAGATaGAGACTGATAATACAGCCC +
Preference number: 2 (lower is better)
Translates to: RVQVQVTFCTYIYEWVLKAPEER*RLIIQP
Trigger: GGGCTGTATTATCAGTCTGCATCTCTCTTCTGGGGC...TTTCAGTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR CCA 90 bp ATCATGACATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTGTCCCAACCTACATATATGAGTaGGTACTGAAATTCAACAGA +
Preference number: 2 (lower is better)
Translates to: IMTWQEASKGKTEQACVPTYIYE*VLKFNR
Trigger: TCTGTTGAATTTCAGTACCCACTCATATATGTAGGT...TGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR CCA 90 bp TGTCAGAGCAGCAAACCTACTTATGGCTATCAATATTCTGTCTTGTTACATTTTCCCTGGTCCACCAAATaGCCCTCCTTAACTCCTGAA +
Preference number: 2 (lower is better)
Translates to: CQSSKPTYGYQYSVLLHFPWSTK*PSLTPE
Trigger: TTCAGGAGTTAAGGAGGGCCATTTGGTGGACCAGGG...AAAATGTAACAAGACAGAATATTGATAGCCATAAGTAGGTTTGCTGCTCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432264.4
3UTR-3UTR CCA 90 bp TCTGTGCAATCCCCTATCTTTGTTTTATTCCCTGTATCATGTAGCTGTGACTTCCCTCATTCTCAGTCTTaGTTTTACCACCTGTGCACA +
Preference number: 2 (lower is better)
Translates to: SVQSPIFVLFPVSCSCDFPHSQS*FYHLCT
Trigger: TGTGCACAGGTGGTAAAACCAAGACTGAGAATGAGG...GAAGTCACAGCTACATGATACAGGGAATAAAACAAAGATAGGGGATTGCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR-3UTR TCA 90 bp AATGTGGGTTGTAGTAACTGCCACACTCACCACATTTATAAAACACCTGTTCTTGTGGAATCCCTAACTTaGGGTGCAAAGGATTTTGAG +
Preference number: 2 (lower is better)
Translates to: NVGCSNCHTHHIYKTPVLVESLT*GAKDFE
Trigger: CTCAAAATCCTTTGCACCTCAAGTTAGGGATTCCAC...AAGAACAGGTGTTTTATAAATGTGGTGAGTGTGGCAGTTACTACAACCCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR-3UTR GCA 90 bp GTGGGTTGTAGTAACTGCCACACTCACCACATTTATAAAACACCTGTTCTTTGGGGACTGTCAAATCTGTaGAATCCCCTATCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: VGCSNCHTHHIYKTPVLWGLSNL*NPLSLF
Trigger: AAACAAAGATAGGGGATTGCACAGATTTGACAGTCC...CCAAAGAACAGGTGTTTTATAAATGTGGTGAGTGTGGCAGTTACTACAACCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR CAA 90 bp AAGATTCATGATCCTGGACTGTCAAATCTGTGCAATCCCCTATCTTaGTTTTATTCCCTGTATCATGTAGCTGTGACTTCTCTAACCTGT +
Preference number: 2 (lower is better)
Translates to: KIHDPGLSNLCNPLS*FYSLYHVAVTSLTC
Trigger: ACAGGTTAGAGAAGTCACAGCTACATGATACAGGGAATAAAACAAAGATAGGGGATTGCACAGATTTGACAGTCCAGGATCATGAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR-3UTR GCA 90 bp TCAGTTCCAAAGCCACTTCTACATTTTTATGTAAATGTCAGAGCAGCAAACCTATGTCCCAGTTCCAGTTaGTCTTCCTCTCCTCATAAA +
Preference number: 2 (lower is better)
Translates to: SVPKPLLHFYVNVRAANLCPSSS*SSSPHK
Trigger: TTTATGAGGAGAGGAAGAGCAACTGGAACTGGGACA...TAGGTTTGCTGCTCTGACATTTACATAAAAATGTAGAAGTGGCTTTGGAACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432264.4
3UTR-3UTR CCA 90 bp TCTGTGCAATCCCCTATCTTTGTTTTATTCCCTGTATCATGTAGCTGTGACTTCTCCACTATCAGTCTGTaGGACTCTGATTCTTTAGAA +
Preference number: 2 (lower is better)
Translates to: SVQSPIFVLFPVSCSCDFSTISL*DSDSLE
Trigger: TTCTAAAGAATCAGAGTCCCACAGACTGATAGTGGA...GAAGTCACAGCTACATGATACAGGGAATAAAACAAAGATAGGGGATTGCACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR-3UTR GCA 90 bp AGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACTGAAAATAAAGAATAAGTACTaGCATTTCCTACCGGGGGAT +
Preference number: 2 (lower is better)
Translates to: RVQVQVTFCTYIYEWVLKIKNKY*HFLPGD
Trigger: ATCCCCCGGTAGGAAATGGCAGTACTTATTCTTTAT...TTTCAGTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR CCA 90 bp CAACAAGTTCCATCCATGTACAGCTTTAGAGATTACTATACTCAGGCATCTACCACCTACATATATGAGTaGGTACTGAAATTCAACAGA +
Preference number: 2 (lower is better)
Translates to: QQVPSMYSFRDYYTQASTTYIYE*VLKFNR
Trigger: TCTGTTGAATTTCAGTACCCACTCATATATGTAGGT...GGTAGATGCCTGAGTATAGTAATCTCTAAAGCTGTACATGGATGGAACTTGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR CCA 90 bp AGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACTGAAAGAAACTAATCAAACATaGTCCTTAAGCGTGAGAATT +
Preference number: 2 (lower is better)
Translates to: RVQVQVTFCTYIYEWVLKETNQT*SLSVRI
Trigger: AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTC...TTTCAGTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR GCA 72 bp ATCCTCCCACCTCAGCCCTCTGAGAAACTGGGAGGCTaGACTACCTCCCAGCTTCTTGGGAAGCTGAGGTGG +
Preference number: 3 (lower is better)
Translates to: ILPPQPSEKLGG*TTSQLLGKLRW
Trigger: CCACCTCAGCTTCCCAAGAAGCTGGGAGGTAGTGCAGCCTCCCAGTTTCTCAGAGGGCTGAGGTGGGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR CCA 72 bp CTCAAGCAATCCTCCCACCTCAGCCCTCTGAGAAACTaGGAGGCTGCACTACCTCCCAGCTTCTTGGGAAGC +
Preference number: 3 (lower is better)
Translates to: LKQSSHLSPLRN*EAALPPSFLGS
Trigger: GCTTCCCAAGAAGCTGGGAGGTAGTGCAGCCTCCCAGTTTCTCAGAGGGCTGAGGTGGGAGGATTGCTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR-3UTR CAA 90 bp GAGGGAGGAAGTACCACTGCATGTGAAGAAGATAAGGGAGGCCCTGGTGGGGCTTTCTCTAACCTGTCCTaGAAGTCAGGGTGCTGGGGA +
Preference number: 3 (lower is better)
Translates to: EGGSTTACEEDKGGPGGAFSNLS*KSGCWG
Trigger: TCCCCAGCACCCTGACTTCAAGGACAGGTTAGAGAA...AGCCCCACCAGGGCCTCCCTTATCTTCTTCACATGCAGTGGTACTTCCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR TCA 72 bp GTGCAGGCATCTGGTAAGGGCTTACTTGCTGCATCATaGCATGGCAGGAGGCATCAAAAGGCAAGACAGAGC +
Preference number: 3 (lower is better)
Translates to: VQASGKGLLAAS*HGRRHQKARQS
Trigger: GCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCATGATGCAGCAAGTAAGCCCTTACCAGATGCCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR GCA 72 bp AGGCAAGACAGAGCAAGCATGTGTCCCAGTTCCAGTTaGTCTTCCTCTCCTCATAAAGCCACCAGTCCCATC +
Preference number: 3 (lower is better)
Translates to: RQDRASMCPSSS*SSSPHKATSPI
Trigger: GATGGGACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGGACACATGCTTGCTCTGTCTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR CCA 72 bp TGTGACTTCTCTAACCTGTCCTTGAAGTCAGGGTGCTaGGGAACGTCCATCAGCAGTCCCTCCACTATCAGT +
Preference number: 3 (lower is better)
Translates to: CDFSNLSLKSGC*GTSISSPSTIS
Trigger: ACTGATAGTGGAGGGACTGCTGATGGACGTTCCCCAGCACCCTGACTTCAAGGACAGGTTAGAGAAGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR-3UTR CAA 90 bp CCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCCATCATGGAGGAGAAGGAACCCAAATaGAAAAACCATATCCCCTTC +
Preference number: 3 (lower is better)
Translates to: PSSSCSSSPHKATSPIMEEKEPK*KNHIPF
Trigger: GAAGGGGATATGGTTTTTCAATTTGGGTTCCTTCTC...CTCCATGATGGGACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR TCA 72 bp CTGGCTATCTCCTCCCTTTCAGTGGTGGAAGATTCATaGTCCTGGACTGTCAAATCTGTGCAATCCCCTATC +
Preference number: 3 (lower is better)
Translates to: LAISSLSVVEDS*SWTVKSVQSPI
Trigger: GATAGGGGATTGCACAGATTTGACAGTCCAGGATCATGAATCTTCCACCACTGAAAGGGAGGAGATAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR CCA 72 bp GGAATGGACTCACTTCTGAGAAACTACAGCAAGTCATaGTCAGGTTTCTCTTCTTTGCCTCTGGTGCTCACC +
Preference number: 3 (lower is better)
Translates to: GMDSLLRNYSKS*SGFSSLPLVLT
Trigger: GGTGAGCACCAGAGGCAAAGAAGAGAAACCTGACCATGACTTGCTGTAGTTTCTCAGAAGTGAGTCCATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR TCA 72 bp ATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTaGGGTGCAAAGGATTTTGAGAACGTGACGGGGCTT +
Preference number: 3 (lower is better)
Translates to: IDTIRRPVESLT*GAKDFENVTGL
Trigger: AAGCCCCGTCACGTTCTCAAAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR CCA 72 bp CCTTCCTCTTCTTATAAAGCCATCAGTCCCATCATATaGGCACCAACCCCCATGCCATGTATAACTTTTAAC +
Preference number: 3 (lower is better)
Translates to: PSSSYKAISPII*APTPMPCITFN
Trigger: GTTAAAAGTTATACATGGCATGGGGGTTGGTGCCCATATGATGGGACTGATGGCTTTATAAGAAGAGGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432264.4
3UTR TCA 72 bp GTTCCATTGATGAGTTTCTTCCTAGTATGCCACTTCTaGTGCTGGATGAAACTTGCATTCCATCTGAAGGCT +
Preference number: 3 (lower is better)
Translates to: VPLMSFFLVCHF*CWMKLAFHLKA
Trigger: AGCCTTCAGATGGAATGCAAGTTTCATCCAGCATCAGAAGTGGCATACTAGGAAGAAACTCATCAATGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR TCA 72 bp ACCCTTAATGCTCCATTAGATAATACAGGCTTTGTCTaGCCTGATCTTCCAGATTTTTCAAGCCTCTACCCA +
Preference number: 3 (lower is better)
Translates to: TLNAPLDNTGFV*PDLPDFSSLYP
Trigger: TGGGTAGAGGCTTGAAAAATCTGGAAGATCAGGTCAGACAAAGCCTGTATTATCTAATGGAGCATTAAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432264.4
3UTR GCA 72 bp GATGCAGGTGAAAGTCTGAATGTGGGTTGTAGTAACTaGCACACTCACCACATTTATAAAACACCTGTTCTT +
Preference number: 3 (lower is better)
Translates to: DAGESLNVGCSN*HTHHIYKTPVL
Trigger: AAGAACAGGTGTTTTATAAATGTGGTGAGTGTGGCAGTTACTACAACCCACATTCAGACTTTCACCTGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR-3UTR CAA 90 bp CCTAAAGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACGAGAAGGAACCCAAATaGAAAAACCATATCCCCTTC +
Preference number: 3 (lower is better)
Translates to: PKGYKSKSLFVPTYMSGYEKEPK*KNHIPF
Trigger: GAAGGGGATATGGTTTTTCAATTTGGGTTCCTTCTC...GTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCTTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR GCA 72 bp TGGTGGAAGATTCATGATCCTGGACTGTCAAATCTGTaGAATCCCCTATCTTTGTTTTATTCCCTGTATCAT +
Preference number: 3 (lower is better)
Translates to: WWKIHDPGLSNL*NPLSLFYSLYH
Trigger: ATGATACAGGGAATAAAACAAAGATAGGGGATTGCACAGATTTGACAGTCCAGGATCATGAATCTTCCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
3UTR CCA 72 bp GTTACAATGGGGATTAAGTTTCAACAAGAATTTTGCTaGGGATATTCAAACAATAGCAATCTGCACACTGAA +
Preference number: 3 (lower is better)
Translates to: VTMGIKFQQEFC*GYSNNSNLHTE
Trigger: TTCAGTGTGCAGATTGCTATTGTTTGAATATCCCCAGCAAAATTCTTGTTGAAACTTAATCCCCATTGTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp AAAATTAGCTGGGTGTGGTGGTGTATGCCCCCAGGGCTCAAGCAATCCTCCCACCGGGCTCTGAAGGGATaGCTTCCCAGGAAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: KISWVWWCMPPGLKQSSHRALKG*LPRKSE
Trigger: CTCGCTTTTCCTGGGAAGTCATCCCTTCAGAGCCCG...GTGGGAGGATTGCTTGAGCCCTGGGGGCATACACCACCACACCCAGCTAATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp AAAATTAGCTGGGTGTGGTGGTGTATGCCCCCAGGGCTCAAGCAATCCTCCCACGGGGCTTACAGGGAGTaGGACAAAGGATTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: KISWVWWCMPPGLKQSSHGAYRE*DKGFGL
Trigger: GAGCCCGAATCCTTTGTCTCACTCCCTGTAAGCCCC...GTGGGAGGATTGCTTGAGCCCTGGGGGCATACACCACCACACCCAGCTAATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp TTTAGCTCATGGTTCCGAGGGCTGGGAACTGTGGAGGGGCCGTATCTGGCCTTCTTGCCATCTCAGGGGTaGCAGAGGCAGAAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: FSSWFRGLGTVEGPYLAFLPSQG*QRQKKV
Trigger: GACTTTCTTCTGCCTCTGTCACCCCTGAGATGGCAA...GAAGGCCAGATACGGCCCCTCCACAGTTCCCAGCCCTCGGAACCATGAGCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR TCA 90 bp GAGGGAGGAAGTACCACTGCATGTGAAGAAGATAAGGGAGGCCCTGGTGGGGCTAACTTGCATTCCATCTaGAGGCTTTCCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: EGGSTTACEEDKGGPGGANLHSI*RLSRTP
Trigger: AGGAGTGCGGGAAAGCCTTCAGATGGAATGCAAGTT...AGCCCCACCAGGGCCTCCCTTATCTTCTTCACATGCAGTGGTACTTCCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494154.6
CDS-3UTR GCA 90 bp AAAATTAGCTGGGTGTGGTGGTGTATGCCCCCAGGGCTCAAGCAATCCTCCCACGAAGAAATACCGAACTaGGGTGGAAGGCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: KISWVWWCMPPGLKQSSHEEIPN*GGRPCH
Trigger: GTGGCAAGGCCTTCCACCGCAGTTCGGTATTTCTTC...GTGGGAGGATTGCTTGAGCCCTGGGGGCATACACCACCACACCCAGCTAATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp GAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGGACGGAAGCATTAGCTaGCCGGCCGTCGGTCCCTAC +
Preference number: 4 (lower is better)
Translates to: EDISKGLHSNSSGMDSLLDGSIS*PAVGPY
Trigger: GTAGGGACCGACGGCCGGCCAGCTAATGCTTCCGTC...CAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR CAA 72 bp GGGCTGGGAACTGTGGAGGGGCCGTATCTGGCCTTCTaGCTGTGTCATAACATGATGGAAAGCATCACATGG +
Preference number: 4 (lower is better)
Translates to: GLGTVEGPYLAF*LCHNMMESITW
Trigger: CCATGTGATGCTTTCCATCATGTTATGACACAGCAAGAAGGCCAGATACGGCCCCTCCACAGTTCCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR TCA 90 bp TTCTCAGTTCTCTCTGTATCCAGAGGAAAGCCCCCTGCAGTTGGGTCTCCATTACGGGCTCTGAAGGGATaGCTTCCCAGGAAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: FSVLSVSRGKPPAVGSPLRALKG*LPRKSE
Trigger: CTCGCTTTTCCTGGGAAGTCATCCCTTCAGAGCCCG...TAATGGAGACCCAACTGCAGGGGGCTTTCCTCTGGATACAGAGAGAACTGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494154.6
CDS-3UTR TCA 90 bp ATGACATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTGTCCCAGTTGGGGCTTACAGGGAGTaGGACAAAGGATTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: MTWQEASKGKTEQACVPVGAYRE*DKGFGL
Trigger: GAGCCCGAATCCTTTGTCTCACTCCCTGTAAGCCCC...AACTGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp CCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCCATCATGGAGGGCATGAGAATCACTTaGACCCTGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PSSSCSSSPHKATSPIMEGMRIT*TLEAEV
Trigger: AACCTCTGCCTCCAGGGTTCAAGTGATTCTCATGCC...CTCCATGATGGGACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp CAAGCATGTGTCCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCGCCCTCCTTAACTCCTaGAAGCAGGCCAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: QACVPVPVALPLLIKPPVALLNS*KQARCS
Trigger: ACTGCATCTGGCCTGCTTTCAGGAGTTAAGGAGGGC...GACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGGACACATGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp CCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCCATCATGGAGGAAACAACAGGTTCCTaGCCAAGCCCTGGAACCACA +
Preference number: 4 (lower is better)
Translates to: PSSSCSSSPHKATSPIMEETTGS*PSPGTT
Trigger: TGTGGTTCCAGGGCTTGGGCAGGAACCTGTTGTTTC...CTCCATGATGGGACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp CCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCCATCATGGAGTGGTTTTACCACCTGTaGACATGCCTCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PSSSCSSSPHKATSPIMEWFYHL*TCLSGP
Trigger: AGGCCCTGAGAGGCATGTGCACAGGTGGTAAAACCA...CTCCATGATGGGACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp GTCTCCCTTCCTCTTCTTATAAAGCCATCAGTCCCATCATATGGGCACCAACCCAAGTGTCCAGGGATCTaGGCCCCATGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VSLPLLIKPSVPSYGHQPKCPGI*APCCFS
Trigger: GGAGAAGCAGCATGGGGCCCAGATCCCTGGACACTT...GGGTTGGTGCCCATATGATGGGACTGATGGCTTTATAAGAAGAGGAAGGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR CCA 90 bp ATCATGACATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTGTCCCAAGCCCTCTGAGAAACTaGGAGGCTGCACTACCTCCC +
Preference number: 4 (lower is better)
Translates to: IMTWQEASKGKTEQACVPSPLRN*EAALPP
Trigger: GGGAGGTAGTGCAGCCTCCCAGTTTCTCAGAGGGCT...TGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp CCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCCATCATGGAGAAAATTAGCTGGGTGTaGTGGTGTATGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSSSCSSSPHKATSPIMEKISWV*WCMPPG
Trigger: CCCTGGGGGCATACACCACCACACCCAGCTAATTTT...CTCCATGATGGGACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp AAAATTAGCTGGGTGTGGTGGTGTATGCCCCCAGGGCTCAAGCAATCCTCCCACTGCTGCATCATGACATaGCAGGAGGCATCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: KISWVWWCMPPGLKQSSHCCIMT*QEASKG
Trigger: GCCTTTTGATGCCTCCTGCCATGTCATGATGCAGCA...GTGGGAGGATTGCTTGAGCCCTGGGGGCATACACCACCACACCCAGCTAATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp CCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCCATCATGGAGAGGTGCAAAGGATTTTaGGAACGTGACGGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: PSSSCSSSPHKATSPIMERCKGF*ERDGAY
Trigger: GTAAGCCCCGTCACGTTCTCAAAATCCTTTGCACCT...CTCCATGATGGGACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp CAAGCATGTGTCCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCTTACATTCTTTCAGTaGGCCTTGCCCCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: QACVPVPVALPLLIKPPVLTFFQ*ALPLVH
Trigger: GTGGACCAGGGGCAAGGCTCACTGAAAGAATGTAAG...GACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGGACACATGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp CAAGCATGTGTCCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCGAAACAACAGGTTCCTaGCCAAGCCCTGGAACCACA +
Preference number: 4 (lower is better)
Translates to: QACVPVPVALPLLIKPPVETTGS*PSPGTT
Trigger: TGTGGTTCCAGGGCTTGGGCAGGAACCTGTTGTTTC...GACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGGACACATGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp GACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTATCCAGCCTGTGCACATaGCTCTCAGGGCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: DKTRGISIDTIRRPVESLSSLCT*LSGPLP
Trigger: GGGGAGAGGCCCTGAGAGGCATGTGCACAGGCTGGA...TAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314686.9
CDS-3UTR GCA 90 bp TCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAAGAAACTCTGTGCACATaGCTCTCAGGGCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SGVGVRTYPRACIVTHQEETLCT*LSGPLP
Trigger: GGGGAGAGGCCCTGAGAGGCATGTGCACAGAGTTTC...TTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429348.6
CDS-3UTR CCA 90 bp GACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAGACGGAAGCATTAGCTaGCCGGCCGTCGGTCCCTAC +
Preference number: 4 (lower is better)
Translates to: DKTRGISIDTIRRPVESLDGSIS*PAVGPY
Trigger: GTAGGGACCGACGGCCGGCCAGCTAATGCTTCCGTC...TAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp GGGAAATCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATAAGTGTCCAGGGATCTaGGCCCCATGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GKSGVGVRTYPRACIVTHKCPGI*APCCFS
Trigger: GGAGAAGCAGCATGGGGCCCAGATCCCTGGACACTT...ATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGATTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp AAAATTAGCTGGGTGTGGTGGTGTATGCCCCCAGGGCTCAAGCAATCCTCCCACCCTCCCTTTCAGTGGTaGAAGATTCATGATCCTGGA +
Preference number: 4 (lower is better)
Translates to: KISWVWWCMPPGLKQSSHPPFQW*KIHDPG
Trigger: TCCAGGATCATGAATCTTCCACCACTGAAAGGGAGG...GTGGGAGGATTGCTTGAGCCCTGGGGGCATACACCACCACACCCAGCTAATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp AAAATTAGCTGGGTGTGGTGGTGTATGCCCCCAGGGCTCAAGCAATCCTCCCACGTGGTGGAAGATTCATaGTCCTGGACTGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: KISWVWWCMPPGLKQSSHVVEDS*SWTVKS
Trigger: AGATTTGACAGTCCAGGATCATGAATCTTCCACCAC...GTGGGAGGATTGCTTGAGCCCTGGGGGCATACACCACCACACCCAGCTAATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp CCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCCATCATGGAGTTACTTGCTGCATCATaGCATGGCAGGAGGCATCAA +
Preference number: 4 (lower is better)
Translates to: PSSSCSSSPHKATSPIMELLAAS*HGRRHQ
Trigger: TTGATGCCTCCTGCCATGTCATGATGCAGCAAGTAA...CTCCATGATGGGACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp TTTAGCTCATGGTTCCGAGGGCTGGGAACTGTGGAGGGGCCGTATCTGGCCTTCGGACTGTCAAATCTGTaGAATCCCCTATCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: FSSWFRGLGTVEGPYLAFGLSNL*NPLSLF
Trigger: AAACAAAGATAGGGGATTGCACAGATTTGACAGTCC...GAAGGCCAGATACGGCCCCTCCACAGTTCCCAGCCCTCGGAACCATGAGCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR GCA 90 bp TTTAGCTCATGGTTCCGAGGGCTGGGAACTGTGGAGGGGCCGTATCTGGCCTTCATAAAGAATAAGTACTaGCATTTCCTACCGGGGGAT +
Preference number: 4 (lower is better)
Translates to: FSSWFRGLGTVEGPYLAFIKNKY*HFLPGD
Trigger: ATCCCCCGGTAGGAAATGGCAGTACTTATTCTTTAT...GAAGGCCAGATACGGCCCCTCCACAGTTCCCAGCCCTCGGAACCATGAGCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR GCA 90 bp ATGACATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTGTCCCAGTTCAGAGGAAAGCCCCCTaGAGTTGGGTACAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: MTWQEASKGKTEQACVPVQRKAP*SWVQGS
Trigger: ACTTCCTTGTACCCAACTGCAGGGGGCTTTCCTCTG...AACTGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447116.6
CDS-3UTR CCA 90 bp CAAGCATGTGTCCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCCACTGCAAACAGCCTaGGTGACAAGAGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: QACVPVPVALPLLIKPPVPLQTA*VTRVKL
Trigger: GAGTTTCACTCTTGTCACCCAGGCTGTTTGCAGTGG...GACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGGACACATGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp TCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAATACCTCCCAGCTTCTTaGGAAGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SGVGVRTYPRACIVTHQEYLPAS*EAEVGG
Trigger: TCCTCCCACCTCAGCTTCCCAAGAAGCTGGGAGGTA...TTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp ATGACATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTGTCCCAGTTCCATTGTGGATTCTCTaGTGCACTATGAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: MTWQEASKGKTEQACVPVPLWIL*CTMKRE
Trigger: CTCCCGCTTCATAGTGCATCAGAGAATCCACAATGG...AACTGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp CAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCGGGCTCTGAAGGGATaGCTTCCCAGGAAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: QDKTRGISIDTIRRPVESRALKG*LPRKSE
Trigger: CTCGCTTTTCCTGGGAAGTCATCCCTTCAGAGCCCG...GGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp TCTGGTGCTCACCAGTGTGATGCCAACAAGTTCCATCCATGTACAGCTTTAGAGAAAGGATTCGGGCTCTaGAGGGATGACTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SGAHQCDANKFHPCTALEKGFGL*RDDFPG
Trigger: TCCTGGGAAGTCATCCCTTCAGAGCCCGAATCCTTT...CTCTAAAGCTGTACATGGATGGAACTTGTTGGCATCACACTGGTGAGCACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp CAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCGGGGCTTACAGGGAGTaGGACAAAGGATTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: QDKTRGISIDTIRRPVESGAYRE*DKGFGL
Trigger: GAGCCCGAATCCTTTGTCTCACTCCCTGTAAGCCCC...GGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp GCCATTTCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGGGGGCTTACAGGGAGTaGGACAAAGGATTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: AISYRGIKETNQTWSLSVGAYRE*DKGFGL
Trigger: GAGCCCGAATCCTTTGTCTCACTCCCTGTAAGCCCC...CACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGAAATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp CCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCCATCATGGAGGTGGAATCCCTAACTTaGGGTGCAAAGGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: PSSSCSSSPHKATSPIMEVESLT*GAKDFE
Trigger: CTCAAAATCCTTTGCACCTCAAGTTAGGGATTCCAC...CTCCATGATGGGACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp GGGAAATCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATCTTACATTCTTTCAGTaGGCCTTGCCCCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GKSGVGVRTYPRACIVTHLTFFQ*ALPLVH
Trigger: GTGGACCAGGGGCAAGGCTCACTGAAAGAATGTAAG...ATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGATTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp AAAATTAGCTGGGTGTGGTGGTGTATGCCCCCAGGGCTCAAGCAATCCTCCCACGAATGGACTCACTTCTaGGAAACTACAGCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KISWVWWCMPPGLKQSSHEWTHF*ETTASH
Trigger: ATGACTTGCTGTAGTTTCTCAGAAGTGAGTCCATTC...GTGGGAGGATTGCTTGAGCCCTGGGGGCATACACCACCACACCCAGCTAATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp CAAGCATGTGTCCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCATGCTGCTTCTCCTTaGTCCAGCTGGAATATCAGA +
Preference number: 4 (lower is better)
Translates to: QACVPVPVALPLLIKPPVHAASP*SSWNIR
Trigger: TCTGATATTCCAGCTGGAGCAAGGAGAAGCAGCATG...GACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGGACACATGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp GGGAAATCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATTCTTTCAGTGAGCCTTaGCCCTGGTCCACCAAATGG +
Preference number: 4 (lower is better)
Translates to: GKSGVGVRTYPRACIVTHSFSEP*PWSTKW
Trigger: CCATTTGGTGGACCAGGGGCAAGGCTCACTGAAAGA...ATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGATTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp TCTGGTGCTCACCAGTGTGATGCCAACAAGTTCCATCCATGTACAGCTTTAGAGTCTTTCAGTGAGCCTTaGCCCTGGTCCACCAAATGG +
Preference number: 4 (lower is better)
Translates to: SGAHQCDANKFHPCTALESFSEP*PWSTKW
Trigger: CCATTTGGTGGACCAGGGGCAAGGCTCACTGAAAGA...CTCTAAAGCTGTACATGGATGGAACTTGTTGGCATCACACTGGTGAGCACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp AATGTGGACACGATAAAGAATAAGTACTGCCATTTCCTACCGGGGGATAAAAGAGACGGAAGCATTAGCTaGCCGGCCGTCGGTCCCTAC +
Preference number: 4 (lower is better)
Translates to: NVDTIKNKYCHFLPGDKRDGSIS*PAVGPY
Trigger: GTAGGGACCGACGGCCGGCCAGCTAATGCTTCCGTC...TCTTTTATCCCCCGGTAGGAAATGGCAGTACTTATTCTTTATCGTGTCCACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGAAAGTGTCCAGGGATCTaGGCCCCATGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGKCPGI*APCCFS
Trigger: GGAGAAGCAGCATGGGGCCCAGATCCCTGGACACTT...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp CAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCAGCCCTCTGAGAAACTaGGAGGCTGCACTACCTCCC +
Preference number: 4 (lower is better)
Translates to: QDKTRGISIDTIRRPVESSPLRN*EAALPP
Trigger: GGGAGGTAGTGCAGCCTCCCAGTTTCTCAGAGGGCT...GGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp TCTGGTGCTCACCAGTGTGATGCCAACAAGTTCCATCCATGTACAGCTTTAGAGAACTTGCATTCCATCTaGAGGCTTTCCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: SGAHQCDANKFHPCTALENLHSI*RLSRTP
Trigger: AGGAGTGCGGGAAAGCCTTCAGATGGAATGCAAGTT...CTCTAAAGCTGTACATGGATGGAACTTGTTGGCATCACACTGGTGAGCACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp GAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGAGGTGCAAAGGATTTTaGGAACGTGACGGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: EDISKGLHSNSSGMDSLLRCKGF*ERDGAY
Trigger: GTAAGCCCCGTCACGTTCTCAAAATCCTTTGCACCT...CAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp GCCATTTCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGGCCCTCCTTAACTCCTaGAAGCAGGCCAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: AISYRGIKETNQTWSLSVALLNS*KQARCS
Trigger: ACTGCATCTGGCCTGCTTTCAGGAGTTAAGGAGGGC...CACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGAAATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp CAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCGCCCTCCTTAACTCCTaGAAGCAGGCCAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: QDKTRGISIDTIRRPVESALLNS*KQARCS
Trigger: ACTGCATCTGGCCTGCTTTCAGGAGTTAAGGAGGGC...GGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp ATGACATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTGTCCCAGTTCATGCTGCTTCTCCTTaGTCCAGCTGGAATATCAGA +
Preference number: 4 (lower is better)
Translates to: MTWQEASKGKTEQACVPVHAASP*SSWNIR
Trigger: TCTGATATTCCAGCTGGAGCAAGGAGAAGCAGCATG...AACTGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGTCCTTGAAGTCAGGGTaGTGGGGAACGTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: DQRNINRHNQETSGIPNLSLKSG*WGTSIS
Trigger: GCTGATGGACGTTCCCCAGCACCCTGACTTCAAGGA...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp CAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCTCCTTGAAGTCAGGGTaGTGGGGAACGTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: QDKTRGISIDTIRRPVESSLKSG*WGTSIS
Trigger: GCTGATGGACGTTCCCCAGCACCCTGACTTCAAGGA...GGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGACGGAAGCATTAGCTaGCCGGCCGTCGGTCCCTAC +
Preference number: 4 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPDGSIS*PAVGPY
Trigger: GTAGGGACCGACGGCCGGCCAGCTAATGCTTCCGTC...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATGGAACCACACTGTCTaGAGCATGGCTGATGACCCC +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGWNHTV*SMADDP
Trigger: GGGGTCATCAGCCATGCTCCAGACAGTGTGGTTCCA...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp AAAATTAGCTGGGTGTGGTGGTGTATGCCCCCAGGGCTCAAGCAATCCTCCCACTCCACTATCAGTCTGTaGGACTCTGATTCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: KISWVWWCMPPGLKQSSHSTISL*DSDSLE
Trigger: TTCTAAAGAATCAGAGTCCCACAGACTGATAGTGGA...GTGGGAGGATTGCTTGAGCCCTGGGGGCATACACCACCACACCCAGCTAATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp GAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGTGCTGCATCATGACATaGCAGGAGGCATCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: EDISKGLHSNSSGMDSLLCCIMT*QEASKG
Trigger: GCCTTTTGATGCCTCCTGCCATGTCATGATGCAGCA...CAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp ATGACATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTGTCCCAGTTGTGGTGGAAGATTCATaGTCCTGGACTGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: MTWQEASKGKTEQACVPVVVEDS*SWTVKS
Trigger: AGATTTGACAGTCCAGGATCATGAATCTTCCACCAC...AACTGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp CAAGCATGTGTCCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCATGCAGGTGAAAGTCTaGATGTGGGTTGTAGTAACT +
Preference number: 4 (lower is better)
Translates to: QACVPVPVALPLLIKPPVMQVKV*MWVVVT
Trigger: AGTTACTACAACCCACATTCAGACTTTCACCTGCAT...GACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGGACACATGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp CCTAAAGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACCGGGCTCTGAAGGGATaGCTTCCCAGGAAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: PKGYKSKSLFVPTYMSGYRALKG*LPRKSE
Trigger: CTCGCTTTTCCTGGGAAGTCATCCCTTCAGAGCCCG...GTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCTTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp TCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGAGAATTCGGGCTCTGAAGGGATaGCTTCCCAGGAAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: SYRGIKETNQTWSLSVRIRALKG*LPRKSE
Trigger: CTCGCTTTTCCTGGGAAGTCATCCCTTCAGAGCCCG...AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAAAGGATTCGGGCTCTaGAGGGATGACTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: DQRNINRHNQETSGIPNLKGFGL*RDDFPG
Trigger: TCCTGGGAAGTCATCCCTTCAGAGCCCGAATCCTTT...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp ATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAAGGGGCTTACAGGGAGTaGGACAAAGGATTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: IQDKTRGISIDTIRRPVEGAYRE*DKGFGL
Trigger: GAGCCCGAATCCTTTGTCTCACTCCCTGTAAGCCCC...TTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGAAGGATTTTGAGAACGTaGCGGGGCTTACAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGRILRT*RGLQGV
Trigger: CACTCCCTGTAAGCCCCGTCACGTTCTCAAAATCCT...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp GACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAAGGATTTTGAGAACGTaGCGGGGCTTACAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: DKTRGISIDTIRRPVESLRILRT*RGLQGV
Trigger: CACTCCCTGTAAGCCCCGTCACGTTCTCAAAATCCT...TAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGATTTTGAGAACGTaGCGGGGCTTACAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: DQRNINRHNQETSGIPNLRILRT*RGLQGV
Trigger: CACTCCCTGTAAGCCCCGTCACGTTCTCAAAATCCT...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp TTCTCAGTTCTCTCTGTATCCAGAGGAAAGCCCCCTGCAGTTGGGTCTCCATTAGTGGAATCCCTAACTTaGGGTGCAAAGGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: FSVLSVSRGKPPAVGSPLVESLT*GAKDFE
Trigger: CTCAAAATCCTTTGCACCTCAAGTTAGGGATTCCAC...TAATGGAGACCCAACTGCAGGGGGCTTTCCTCTGGATACAGAGAGAACTGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494154.6
CDS-3UTR TCA 90 bp TCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGAGAAACTACGTCAACACACTGCAGTaGTCCATGATCGCACTACTG +
Preference number: 4 (lower is better)
Translates to: SKGLHSNSSGMDSLLRNYVNTLQ*SMIALL
Trigger: CAGTAGTGCGATCATGGATCACTGCAGTGTGTTGAC...GTAGTTTCTCAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp AATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATTTTCCTTGAAGTCAGGGTaGTGGGGAACGTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: NRHNQETSGIPNLRCKGFSLKSG*WGTSIS
Trigger: GCTGATGGACGTTCCCCAGCACCCTGACTTCAAGGA...AAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGAGAAGAAATACCGAACTaGGGTGGAAGGCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGEEIPN*GGRPCH
Trigger: GTGGCAAGGCCTTCCACCGCAGTTCGGTATTTCTTC...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGGTGTGGTGGTGTATaGCCCCAGGGCTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: NINRHNQETSGIPNLRCKGCGGV*PQGSSN
Trigger: ATTGCTTGAGCCCTGGGGGCATACACCACCACACCC...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp ATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAAGGGTGTGGTGGTGTATaGCCCCAGGGCTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: IQDKTRGISIDTIRRPVEGCGGV*PQGSSN
Trigger: ATTGCTTGAGCCCTGGGGGCATACACCACCACACCC...TTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATGGTTTTACCACCTGTaGACATGCCTCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGWFYHL*TCLSGP
Trigger: AGGCCCTGAGAGGCATGTGCACAGGTGGTAAAACCA...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp ATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAAAAGTGTCCAGGGATCTaGGCCCCATGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IQDKTRGISIDTIRRPVEKCPGI*APCCFS
Trigger: GGAGAAGCAGCATGGGGCCCAGATCCCTGGACACTT...TTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGTTGAAGTCAGGGTGCTaGGGAACGTCCATCAGCAGT +
Preference number: 4 (lower is better)
Translates to: DQRNINRHNQETSGIPNLLKSGC*GTSISS
Trigger: ACTGCTGATGGACGTTCCCCAGCACCCTGACTTCAA...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp ATGACATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTGTCCCAGTTTCTCCTCCCTTTCAGTaGTGGAAGATTCATGATCCT +
Preference number: 4 (lower is better)
Translates to: MTWQEASKGKTEQACVPVSPPFQ*WKIHDP
Trigger: AGGATCATGAATCTTCCACCACTGAAAGGGAGGAGA...AACTGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp TCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGAGAAACTACTGCTGCATCATGACATaGCAGGAGGCATCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: SKGLHSNSSGMDSLLRNYCCIMT*QEASKG
Trigger: GCCTTTTGATGCCTCCTGCCATGTCATGATGCAGCA...GTAGTTTCTCAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp CCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCCATCATGGAGTTCTCTTCTAAGCCTTaGCCAAAATCACCCTTAATG +
Preference number: 4 (lower is better)
Translates to: PSSSCSSSPHKATSPIMEFSSKP*PKSPLM
Trigger: CATTAAGGGTGATTTTGGCCAAGGCTTAGAAGAGAA...CTCCATGATGGGACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR TCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGAAACTTGCATTCCATCTaGAGGCTTTCCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGNLHSI*RLSRTP
Trigger: AGGAGTGCGGGAAAGCCTTCAGATGGAATGCAAGTT...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAACTTGCATTCCATCTaGAGGCTTTCCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: DQRNINRHNQETSGIPNLNLHSI*RLSRTP
Trigger: AGGAGTGCGGGAAAGCCTTCAGATGGAATGCAAGTT...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp AAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTAAAGGATTCGGGCTCTaGAGGGATGACTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KTRGISIDTIRRPVESLTKGFGL*RDDFPG
Trigger: TCCTGGGAAGTCATCCCTTCAGAGCCCGAATCCTTT...AGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp ACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCGGGGCTTACAGGGAGTaGGACAAAGGATTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TTYTRQDQRNINRHNQETGAYRE*DKGFGL
Trigger: GAGCCCGAATCCTTTGTCTCACTCCCTGTAAGCCCC...GGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp AAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTAGGATTTTGAGAACGTaGCGGGGCTTACAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: KTRGISIDTIRRPVESLTRILRT*RGLQGV
Trigger: CACTCCCTGTAAGCCCCGTCACGTTCTCAAAATCCT...AGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp GCCATTTCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGAGGTGCAAAGGATTTTaGGAACGTGACGGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: AISYRGIKETNQTWSLSVRCKGF*ERDGAY
Trigger: GTAAGCCCCGTCACGTTCTCAAAATCCTTTGCACCT...CACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGAAATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp CAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCAGGTGCAAAGGATTTTaGGAACGTGACGGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: QDKTRGISIDTIRRPVESRCKGF*ERDGAY
Trigger: GTAAGCCCCGTCACGTTCTCAAAATCCTTTGCACCT...GGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp CAAGCATGTGTCCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCATTGGACACTTTATCTaGTTATGTTCTCCCATAGGC +
Preference number: 4 (lower is better)
Translates to: QACVPVPVALPLLIKPPVIGHFI*LCSPIG
Trigger: GCCTATGGGAGAACATAATCAGATAAAGTGTCCAAT...GACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGGACACATGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp GCCATTTCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGGTCAACACACTGCAGTaGTCCATGATCGCACTACTG +
Preference number: 4 (lower is better)
Translates to: AISYRGIKETNQTWSLSVVNTLQ*SMIALL
Trigger: CAGTAGTGCGATCATGGATCACTGCAGTGTGTTGAC...CACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGAAATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp CCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCCCATCATGGAGGAAATTCAACAGATATaGAAAGGAATAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSSSCSSSPHKATSPIMEEIQQI*KGIEAG
Trigger: TCCAGCCTCTATTCCTTTTCATATCTGTTGAATTTC...CTCCATGATGGGACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp AATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATTTTGGTGCTCACCAGTGTaGTGCCAACAAGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: NRHNQETSGIPNLRCKGFWCSPV*CQQVPS
Trigger: GGATGGAACTTGTTGGCATCACACTGGTGAGCACCA...AAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp AACTACAGCAAGTCATGGTCAGGTTTCTCTTCTTTGCCTCTGGTGCTCACCAGTTGCTGTGTCATAACATaGTGGAAAGCATCACATGGC +
Preference number: 4 (lower is better)
Translates to: NYSKSWSGFSSLPLVLTSCCVIT*WKASHG
Trigger: GCCATGTGATGCTTTCCATCATGTTATGACACAGCA...ACTGGTGAGCACCAGAGGCAAAGAAGAGAAACCTGACCATGACTTGCTGTAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR GCA 90 bp AAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTGAAACAACAGGTTCCTaGCCAAGCCCTGGAACCACA +
Preference number: 4 (lower is better)
Translates to: KTRGISIDTIRRPVESLTETTGS*PSPGTT
Trigger: TGTGGTTCCAGGGCTTGGGCAGGAACCTGTTGTTTC...AGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000494154.6
CDS-3UTR GCA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTTTGCACTCCAGCCTGTaGACATGCCTCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TYTRQDQRNINRHNQETSLHSSL*TCLSGP
Trigger: AGGCCCTGAGAGGCATGTGCACAGGCTGGAGTGCAA...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314686.9
CDS-3UTR GCA 90 bp CAACAAGTTCCATCCATGTACAGCTTTAGAGATTACTATACTCAGGCATCTACCTCCTTGAAGTCAGGGTaGTGGGGAACGTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: QQVPSMYSFRDYYTQASTSLKSG*WGTSIS
Trigger: GCTGATGGACGTTCCCCAGCACCCTGACTTCAAGGA...GGTAGATGCCTGAGTATAGTAATCTCTAAAGCTGTACATGGATGGAACTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp ATCATGACATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTGTCCCAGTGGGTTGTAGTAACTaGCACACTCACCACATTTAT +
Preference number: 4 (lower is better)
Translates to: IMTWQEASKGKTEQACVPVGCSN*HTHHIY
Trigger: ATAAATGTGGTGAGTGTGGCAGTTACTACAACCCAC...TGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp GCCATTTCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGGCCCCAGAAGAGAGATaGAGACTGATAATACAGCCC +
Preference number: 4 (lower is better)
Translates to: AISYRGIKETNQTWSLSVAPEER*RLIIQP
Trigger: GGGCTGTATTATCAGTCTGCATCTCTCTTCTGGGGC...CACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGAAATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
CDS-3UTR GCA 90 bp ATCATGACATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTGTCCCAACATATCCAAGGGCCTaGATAGTAACTCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: IMTWQEASKGKTEQACVPTYPRA*IVTHQE
Trigger: TTCCTGATGAGTTACTATGCAGGCCCTTGGATATGT...TGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp GTGGGTTGTAGTAACTGCCACACTCACCACATTTATAAAACACCTGTTCTTTGGTGGTTTTACCACCTGTaGACATGCCTCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VGCSNCHTHHIYKTPVLWWFYHL*TCLSGP
Trigger: AGGCCCTGAGAGGCATGTGCACAGGTGGTAAAACCA...CCAAAGAACAGGTGTTTTATAAATGTGGTGAGTGTGGCAGTTACTACAACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
CDS-3UTR GCA 90 bp TCTGTGCAATCCCCTATCTTTGTTTTATTCCCTGTATCATGTAGCTGTGACTTCCAGAGGAAAGCCCCCTaGAGTTGGGTCTCCATTAGG +
Preference number: 4 (lower is better)
Translates to: SVQSPIFVLFPVSCSCDFQRKAP*SWVSIR
Trigger: CCTAATGGAGACCCAACTGCAGGGGGCTTTCCTCTG...GAAGTCACAGCTACATGATACAGGGAATAAAACAAAGATAGGGGATTGCACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494154.6
CDS-3UTR CCA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTAAGTGTCCAGGGATCTaGGCCCCATGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TYTRQDQRNINRHNQETSKCPGI*APCCFS
Trigger: GGAGAAGCAGCATGGGGCCCAGATCCCTGGACACTT...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp AATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATTTCTTGGTTTTACCACCTaGAAGGCAGAGGTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: NRHNQETSGIPNLRCKGFLGFTT*KAEVAV
Trigger: CACCGCAACCTCTGCCTTCCAGGTGGTAAAACCAAG...AAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314686.9
ENST00000429348.6
CDS-3UTR CCA 90 bp AATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATTTTTGAAGTCAGGGTGCTaGGGAACGTCCATCAGCAGT +
Preference number: 4 (lower is better)
Translates to: NRHNQETSGIPNLRCKGFLKSGC*GTSISS
Trigger: ACTGCTGATGGACGTTCCCCAGCACCCTGACTTCAA...AAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp GACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTATGTAATCCCAGCACTTaGGAGACTGAGGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: DKTRGISIDTIRRPVESLCNPST*ETEAGE
Trigger: TTCACCTGCCTCAGTCTCCCAAGTGCTGGGATTACA...TAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp AAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTCCCTGGTCCACCAAATaGCCCTCCTTAACTCCTGAA +
Preference number: 4 (lower is better)
Translates to: KTRGISIDTIRRPVESLTPWSTK*PSLTPE
Trigger: TTCAGGAGTTAAGGAGGGCCATTTGGTGGACCAGGG...AGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp CCTAAAGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACTACCTCCCAGCTTCTTaGGAAGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PKGYKSKSLFVPTYMSGYYLPAS*EAEVGG
Trigger: TCCTCCCACCTCAGCTTCCCAAGAAGCTGGGAGGTA...GTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCTTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp TCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAACCTCATTCTCAGTCTTaGTTTTACCACCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: SGVGVRTYPRACIVTHQEPHSQS*FYHLCT
Trigger: TGTGCACAGGTGGTAAAACCAAGACTGAGAATGAGG...TTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432264.4
ENST00000447116.6
3UTR CAA 72 bp AGAAACTACAGCAAGTCATGGTCAGGTTTCTCTTCTTaGCCTCTGGTGCTCACCAGTGTGATGCCAACAAGT +
Preference number: 4 (lower is better)
Translates to: RNYSKSWSGFSS*PLVLTSVMPTS
Trigger: ACTTGTTGGCATCACACTGGTGAGCACCAGAGGCAAAGAAGAGAAACCTGACCATGACTTGCTGTAGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp ATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAAAGAGGTTGCGGTGAGTaGAGATCACGCCATTGCACT +
Preference number: 4 (lower is better)
Translates to: IQDKTRGISIDTIRRPVERGCGE*RSRHCT
Trigger: AGTGCAATGGCGTGATCTTCACTCACCGCAACCTCT...TTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314686.9
ENST00000429348.6
CDS-3UTR TCA 90 bp TCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAAATGCAGGTGAAAGTCTaGATGTGGGTTGTAGTAACT +
Preference number: 4 (lower is better)
Translates to: SGVGVRTYPRACIVTHQEMQVKV*MWVVVT
Trigger: AGTTACTACAACCCACATTCAGACTTTCACCTGCAT...TTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp GGGAAATCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATATGCAGGTGAAAGTCTaGATGTGGGTTGTAGTAACT +
Preference number: 4 (lower is better)
Translates to: GKSGVGVRTYPRACIVTHMQVKV*MWVVVT
Trigger: AGTTACTACAACCCACATTCAGACTTTCACCTGCAT...ATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGATTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp GGGAAATCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATGAATTCGTTCATGGATaGTGCAGTCATAGCTACAAC +
Preference number: 4 (lower is better)
Translates to: GKSGVGVRTYPRACIVTHEFVHG*CSHSYN
Trigger: GTTGTAGCTATGACTGCATCATCCATGAACGAATTC...ATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGATTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp AATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATTTCCATTGTGGATTCTCTaGTGCACTATGAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: NRHNQETSGIPNLRCKGFPLWIL*CTMKRE
Trigger: CTCCCGCTTCATAGTGCATCAGAGAATCCACAATGG...AAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp TCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGAGAATTAGGATTTTGAGAACGTaGCGGGGCTTACAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SYRGIKETNQTWSLSVRIRILRT*RGLQGV
Trigger: CACTCCCTGTAAGCCCCGTCACGTTCTCAAAATCCT...AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGCATGAGAATCACTTaGACCCTGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: NINRHNQETSGIPNLRCKGMRIT*TLEAEV
Trigger: AACCTCTGCCTCCAGGGTTCAAGTGATTCTCATGCC...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAACTTACATTCTTTCAGTaGGCCTTGCCCCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: NINRHNQETSGIPNLRCKLTFFQ*ALPLVH
Trigger: GTGGACCAGGGGCAAGGCTCACTGAAAGAATGTAAG...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp GAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGAGAAGGAACCCAAATTaGAAAACCATATCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: EDISKGLHSNSSGMDSLLRRNPN*KTISPS
Trigger: GGAAGGGGATATGGTTTTTCAATTTGGGTTCCTTCT...CAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp TATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGATGGTGCTCACCAGTGTaGTGCCAACAAGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: YTRQDQRNINRHNQETSGWCSPV*CQQVPS
Trigger: GGATGGAACTTGTTGGCATCACACTGGTGAGCACCA...TCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp TCTGGTGCTCACCAGTGTGATGCCAACAAGTTCCATCCATGTACAGCTTTAGAGGAATGGACTCACTTCTaGGAAACTACAGCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SGAHQCDANKFHPCTALEEWTHF*ETTASH
Trigger: ATGACTTGCTGTAGTTTCTCAGAAGTGAGTCCATTC...CTCTAAAGCTGTACATGGATGGAACTTGTTGGCATCACACTGGTGAGCACCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGAAACAACAGGTTCCTaGCCAAGCCCTGGAACCACA +
Preference number: 4 (lower is better)
Translates to: NINRHNQETSGIPNLRCKETTGS*PSPGTT
Trigger: TGTGGTTCCAGGGCTTGGGCAGGAACCTGTTGTTTC...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000494154.6
CDS-3UTR GCA 90 bp GACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTACATGCTGCTTCTCCTTaGTCCAGCTGGAATATCAGA +
Preference number: 4 (lower is better)
Translates to: DKTRGISIDTIRRPVESLHAASP*SSWNIR
Trigger: TCTGATATTCCAGCTGGAGCAAGGAGAAGCAGCATG...TAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGACATGCTGCTTCTCCTTaGTCCAGCTGGAATATCAGA +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGHAASP*SSWNIR
Trigger: TCTGATATTCCAGCTGGAGCAAGGAGAAGCAGCATG...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCATCCTTGAAGTCAGGGTaGTGGGGAACGTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPSLKSG*WGTSIS
Trigger: GCTGATGGACGTTCCCCAGCACCCTGACTTCAAGGA...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp AGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACTGAAATCCTTGAAGTCAGGGTaGTGGGGAACGTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: RVQVQVTFCTYIYEWVLKSLKSG*WGTSIS
Trigger: GCTGATGGACGTTCCCCAGCACCCTGACTTCAAGGA...TTTCAGTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGGGGTGTGGTGGTGTATaGCCCCAGGGCTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQEGCGGV*PQGSSN
Trigger: ATTGCTTGAGCCCTGGGGGCATACACCACCACACCC...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGAAGTGTCCAGGGATCTaGGCCCCATGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQEKCPGI*APCCFS
Trigger: GGAGAAGCAGCATGGGGCCCAGATCCCTGGACACTT...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp TATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGACTTGGTTTTACCACCTaGAAGGCAGAGGTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: YTRQDQRNINRHNQETSGLGFTT*KAEVAV
Trigger: CACCGCAACCTCTGCCTTCCAGGTGGTAAAACCAAG...TCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314686.9
ENST00000429348.6
CDS-3UTR CCA 90 bp TCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGAGAATTTTGAAGTCAGGGTGCTaGGGAACGTCCATCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SYRGIKETNQTWSLSVRILKSGC*GTSISS
Trigger: ACTGCTGATGGACGTTCCCCAGCACCCTGACTTCAA...AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp CAACAAGTTCCATCCATGTACAGCTTTAGAGATTACTATACTCAGGCATCTACCTTGAAGTCAGGGTGCTaGGGAACGTCCATCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QQVPSMYSFRDYYTQASTLKSGC*GTSISS
Trigger: ACTGCTGATGGACGTTCCCCAGCACCCTGACTTCAA...GGTAGATGCCTGAGTATAGTAATCTCTAAAGCTGTACATGGATGGAACTTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp AATGTGGACACGATAAAGAATAAGTACTGCCATTTCCTACCGGGGGATAAAAGATTGAAGTCAGGGTGCTaGGGAACGTCCATCAGCAGT +
Preference number: 4 (lower is better)
Translates to: NVDTIKNKYCHFLPGDKRLKSGC*GTSISS
Trigger: ACTGCTGATGGACGTTCCCCAGCACCCTGACTTCAA...TCTTTTATCCCCCGGTAGGAAATGGCAGTACTTATTCTTTATCGTGTCCACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
CDS-3UTR CCA 90 bp AATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATTTCCACTGCAAACAGCCTaGGTGACAAGAGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: NRHNQETSGIPNLRCKGFPLQTA*VTRVKL
Trigger: GAGTTTCACTCTTGTCACCCAGGCTGTTTGCAGTGG...AAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTTACCTCCCAGCTTCTTaGGAAGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TYTRQDQRNINRHNQETSYLPAS*EAEVGG
Trigger: TCCTCCCACCTCAGCTTCCCAAGAAGCTGGGAGGTA...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp CCTAAAGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACAAAATTAGCTGGGTGTaGTGGTGTATGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PKGYKSKSLFVPTYMSGYKISWV*WCMPPG
Trigger: CCCTGGGGGCATACACCACCACACCCAGCTAATTTT...GTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCTTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAATCAGTCCCATCATATaGGCACCAACCCCCATGCCA +
Preference number: 4 (lower is better)
Translates to: NINRHNQETSGIPNLRCKISPII*APTPMP
Trigger: TGGCATGGGGGTTGGTGCCCATATGATGGGACTGAT...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR CCA 90 bp CAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCATCTGGTTTGGGGAATaGAAATGCTGCTGGAACCAC +
Preference number: 4 (lower is better)
Translates to: QDKTRGISIDTIRRPVESIWFGE*KCCWNH
Trigger: GTGGTTCCAGCAGCATTTCCATTCCCCAAACCAGAT...GGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456778.5
CDS-3UTR TCA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAACCATTGTGGATTCTCTaGTGCACTATGAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: NINRHNQETSGIPNLRCKPLWIL*CTMKRE
Trigger: CTCCCGCTTCATAGTGCATCAGAGAATCCACAATGG...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp TCTGTGCAATCCCCTATCTTTGTTTTATTCCCTGTATCATGTAGCTGTGACTTCCCATTGTGGATTCTCTaGTGCACTATGAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SVQSPIFVLFPVSCSCDFPLWIL*CTMKRE
Trigger: CTCCCGCTTCATAGTGCATCAGAGAATCCACAATGG...GAAGTCACAGCTACATGATACAGGGAATAAAACAAAGATAGGGGATTGCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
CDS-3UTR TCA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAAACTTGCATTCCATCTaGAGGCTTTCCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: NINRHNQETSGIPNLRCKNLHSI*RLSRTP
Trigger: AGGAGTGCGGGAAAGCCTTCAGATGGAATGCAAGTT...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp TATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAAACTTGCATTCCATCTaGAGGCTTTCCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: YTRQDQRNINRHNQETSGNLHSI*RLSRTP
Trigger: AGGAGTGCGGGAAAGCCTTCAGATGGAATGCAAGTT...TCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp CAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAGTATGCCACTTCTaGTGCTGGATGAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: QDKTRGISIDTIRRPVESLVCHF*CWMKLA
Trigger: TGCAAGTTTCATCCAGCATCAGAAGTGGCATACTAG...GGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGACTAGTATGCCACTTCTaGTGCTGGATGAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGLVCHF*CWMKLA
Trigger: TGCAAGTTTCATCCAGCATCAGAAGTGGCATACTAG...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTAAAGGATTCGGGCTCTaGAGGGATGACTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TYTRQDQRNINRHNQETSKGFGL*RDDFPG
Trigger: TCCTGGGAAGTCATCCCTTCAGAGCCCGAATCCTTT...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAAAAGGATTCGGGCTCTaGAGGGATGACTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPKGFGL*RDDFPG
Trigger: TCCTGGGAAGTCATCCCTTCAGAGCCCGAATCCTTT...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGGTGGAATCCCTAACTTaGGGTGCAAAGGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: DQRNINRHNQETSGIPNLVESLT*GAKDFE
Trigger: CTCAAAATCCTTTGCACCTCAAGTTAGGGATTCCAC...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp TCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGAGAATTGTCAACACACTGCAGTaGTCCATGATCGCACTACTG +
Preference number: 4 (lower is better)
Translates to: SYRGIKETNQTWSLSVRIVNTLQ*SMIALL
Trigger: CAGTAGTGCGATCATGGATCACTGCAGTGTGTTGAC...AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp ATGACATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTGTCCCAGTTGAAATTCAACAGATATaGAAAGGAATAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: MTWQEASKGKTEQACVPVEIQQI*KGIEAG
Trigger: TCCAGCCTCTATTCCTTTTCATATCTGTTGAATTTC...AACTGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGAAACAACAGGTTCCTaGCCAAGCCCTGGAACCACA +
Preference number: 4 (lower is better)
Translates to: TYTRQDQRNINRHNQETSETTGS*PSPGTT
Trigger: TGTGGTTCCAGGGCTTGGGCAGGAACCTGTTGTTTC...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000494154.6
CDS-3UTR GCA 90 bp AAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTCATGCTGCTTCTCCTTaGTCCAGCTGGAATATCAGA +
Preference number: 4 (lower is better)
Translates to: KTRGISIDTIRRPVESLTHAASP*SSWNIR
Trigger: TCTGATATTCCAGCTGGAGCAAGGAGAAGCAGCATG...AGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp AATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATTTCATGCTGCTTCTCCTTaGTCCAGCTGGAATATCAGA +
Preference number: 4 (lower is better)
Translates to: NRHNQETSGIPNLRCKGFHAASP*SSWNIR
Trigger: TCTGATATTCCAGCTGGAGCAAGGAGAAGCAGCATG...AAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp GAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGGGACTGTCAAATCTGTaGAATCCCCTATCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: EDISKGLHSNSSGMDSLLGLSNL*NPLSLF
Trigger: AAACAAAGATAGGGGATTGCACAGATTTGACAGTCC...CAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGAAGAAATACCGAACTaGGGTGGAAGGCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPEEIPN*GGRPCH
Trigger: GTGGCAAGGCCTTCCACCGCAGTTCGGTATTTCTTC...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp AACTACAGCAAGTCATGGTCAGGTTTCTCTTCTTTGCCTCTGGTGCTCACCAGTATAAAGAATAAGTACTaGCATTTCCTACCGGGGGAT +
Preference number: 4 (lower is better)
Translates to: NYSKSWSGFSSLPLVLTSIKNKY*HFLPGD
Trigger: ATCCCCCGGTAGGAAATGGCAGTACTTATTCTTTAT...ACTGGTGAGCACCAGAGGCAAAGAAGAGAAACCTGACCATGACTTGCTGTAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp TCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGAGAATTGCCCCAGAAGAGAGATaGAGACTGATAATACAGCCC +
Preference number: 4 (lower is better)
Translates to: SYRGIKETNQTWSLSVRIAPEER*RLIIQP
Trigger: GGGCTGTATTATCAGTCTGCATCTCTCTTCTGGGGC...AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
CDS-3UTR GCA 90 bp TATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAGCCCCAGAAGAGAGATaGAGACTGATAATACAGCCC +
Preference number: 4 (lower is better)
Translates to: YTRQDQRNINRHNQETSGAPEER*RLIIQP
Trigger: GGGCTGTATTATCAGTCTGCATCTCTCTTCTGGGGC...TCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
CDS-3UTR GCA 90 bp AGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACTGAAATCTTTCAGTGAGCCTTaGCCCTGGTCCACCAAATGG +
Preference number: 4 (lower is better)
Translates to: RVQVQVTFCTYIYEWVLKSFSEP*PWSTKW
Trigger: CCATTTGGTGGACCAGGGGCAAGGCTCACTGAAAGA...TTTCAGTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAACAGGTTTCTCTTCTTTaGCTCTGGTGCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: NINRHNQETSGIPNLRCKQVSLL*LWCSPV
Trigger: CACTGGTGAGCACCAGAGGCAAAGAAGAGAAACCTG...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp AATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATTTCCTCCCTTTCAGTGGTaGAAGATTCATGATCCTGGA +
Preference number: 4 (lower is better)
Translates to: NRHNQETSGIPNLRCKGFPPFQW*KIHDPG
Trigger: TCCAGGATCATGAATCTTCCACCACTGAAAGGGAGG...AAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp CAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCTCTCCTCCCTTTCAGTaGTGGAAGATTCATGATCCT +
Preference number: 4 (lower is better)
Translates to: QDKTRGISIDTIRRPVESSPPFQ*WKIHDP
Trigger: AGGATCATGAATCTTCCACCACTGAAAGGGAGGAGA...GGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp GACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTATCTCCTCCCTTTCAGTaGTGGAAGATTCATGATCCT +
Preference number: 4 (lower is better)
Translates to: DKTRGISIDTIRRPVESLSPPFQ*WKIHDP
Trigger: AGGATCATGAATCTTCCACCACTGAAAGGGAGGAGA...TAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp AATGTGGACACGATAAAGAATAAGTACTGCCATTTCCTACCGGGGGATAAAAGACCACTGCAAACAGCCTaGGTGACAAGAGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: NVDTIKNKYCHFLPGDKRPLQTA*VTRVKL
Trigger: GAGTTTCACTCTTGTCACCCAGGCTGTTTGCAGTGG...TCTTTTATCCCCCGGTAGGAAATGGCAGTACTTATTCTTTATCGTGTCCACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp AATGTGGACACGATAAAGAATAAGTACTGCCATTTCCTACCGGGGGATAAAAGATGTAATCCCAGCACTTaGGAGACTGAGGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: NVDTIKNKYCHFLPGDKRCNPST*ETEAGE
Trigger: TTCACCTGCCTCAGTCTCCCAAGTGCTGGGATTACA...TCTTTTATCCCCCGGTAGGAAATGGCAGTACTTATTCTTTATCGTGTCCACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTCCCTGGTCCACCAAATaGCCCTCCTTAACTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TYTRQDQRNINRHNQETSPWSTK*PSLTPE
Trigger: TTCAGGAGTTAAGGAGGGCCATTTGGTGGACCAGGG...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp CAAGCATGTGTCCCAGTTCCAGTTGCTCTTCCTCTCCTCATAAAGCCACCAGTCACCTACATATATGAGTaGGTACTGAAATTCAACAGA +
Preference number: 4 (lower is better)
Translates to: QACVPVPVALPLLIKPPVTYIYE*VLKFNR
Trigger: TCTGTTGAATTTCAGTACCCACTCATATATGTAGGT...GACTGGTGGCTTTATGAGGAGAGGAAGAGCAACTGGAACTGGGACACATGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp TCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAAAACTACAGCAAGTCATaGTCAGGTTTCTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SGVGVRTYPRACIVTHQENYSKS*SGFSSL
Trigger: CAAAGAAGAGAAACCTGACCATGACTTGCTGTAGTT...TTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp GAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGAACTACAGCAAGTCATaGTCAGGTTTCTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: EDISKGLHSNSSGMDSLLNYSKS*SGFSSL
Trigger: CAAAGAAGAGAAACCTGACCATGACTTGCTGTAGTT...CAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp GGGAAATCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATAATCATAGGGAAATCTaGAGTAGGTGTGAGGACATA +
Preference number: 4 (lower is better)
Translates to: GKSGVGVRTYPRACIVTHNHREI*SRCEDI
Trigger: TATGTCCTCACACCTACTCCAGATTTCCCTATGATT...ATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGATTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTTGGAGGGGCCGTATCTaGCCTTCTTGCTGTGTCATA +
Preference number: 4 (lower is better)
Translates to: TYTRQDQRNINRHNQETSWRGRI*PSCCVI
Trigger: TATGACACAGCAAGAAGGCCAGATACGGCCCCTCCA...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR CCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGAAGTTTATTTAGCTCATaGTTCCGAGGGCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGSLFSS*FRGLGT
Trigger: AGTTCCCAGCCCTCGGAACCATGAGCTAAATAAACT...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR TCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGAGAGGTTGCGGTGAGTaGAGATCACGCCATTGCACT +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQERGCGE*RSRHCT
Trigger: AGTGCAATGGCGTGATCTTCACTCACCGCAACCTCT...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314686.9
ENST00000429348.6
CDS-3UTR TCA 90 bp CAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCGAATTCGTTCATGGATaGTGCAGTCATAGCTACAAC +
Preference number: 4 (lower is better)
Translates to: QDKTRGISIDTIRRPVESEFVHG*CSHSYN
Trigger: GTTGTAGCTATGACTGCATCATCCATGAACGAATTC...GGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCACCATTGTGGATTCTCTaGTGCACTATGAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPPLWIL*CTMKRE
Trigger: CTCCCGCTTCATAGTGCATCAGAGAATCCACAATGG...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGAAAGGATTCGGGCTCTaGAGGGATGACTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQEKGFGL*RDDFPG
Trigger: TCCTGGGAAGTCATCCCTTCAGAGCCCGAATCCTTT...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAAGGTGCAAAGGATTTTaGGAACGTGACGGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPRCKGF*ERDGAY
Trigger: GTAAGCCCCGTCACGTTCTCAAAATCCTTTGCACCT...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp ACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGGTGCAAAGGATTTTaGGAACGTGACGGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: TTYTRQDQRNINRHNQETRCKGF*ERDGAY
Trigger: GTAAGCCCCGTCACGTTCTCAAAATCCTTTGCACCT...GGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp GCCATTTCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGAGAAGGAACCCAAATTaGAAAACCATATCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: AISYRGIKETNQTWSLSVRRNPN*KTISPS
Trigger: GGAAGGGGATATGGTTTTTCAATTTGGGTTCCTTCT...CACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGAAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp TCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAAGAAATTCAACAGATATaGAAAGGAATAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SGVGVRTYPRACIVTHQEEIQQI*KGIEAG
Trigger: TCCAGCCTCTATTCCTTTTCATATCTGTTGAATTTC...TTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp ATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATTACTTGCTGCATCATaGCATGGCAGGAGGCATCAA +
Preference number: 4 (lower is better)
Translates to: IQDKTRGISIDTIRRPVELLAAS*HGRRHQ
Trigger: TTGATGCCTCCTGCCATGTCATGATGCAGCAAGTAA...TTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp GACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAGTGGGTTGTAGTAACTaGCACACTCACCACATTTAT +
Preference number: 4 (lower is better)
Translates to: DKTRGISIDTIRRPVESLVGCSN*HTHHIY
Trigger: ATAAATGTGGTGAGTGTGGCAGTTACTACAACCCAC...TAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGAGTGGGTTGTAGTAACTaGCACACTCACCACATTTAT +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGVGCSN*HTHHIY
Trigger: ATAAATGTGGTGAGTGTGGCAGTTACTACAACCCAC...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGGAAGAAATACCGAACTaGGGTGGAAGGCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQEEEIPN*GGRPCH
Trigger: GTGGCAAGGCCTTCCACCGCAGTTCGGTATTTCTTC...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp CAACAAGTTCCATCCATGTACAGCTTTAGAGATTACTATACTCAGGCATCTACCAAAAGTGAAACTCTGTaGACATGCCTCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QQVPSMYSFRDYYTQASTKSETL*TCLSGP
Trigger: AGGCCCTGAGAGGCATGTGCACAGAGTTTCACTTTT...GGTAGATGCCTGAGTATAGTAATCTCTAAAGCTGTACATGGATGGAACTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429348.6
CDS-3UTR GCA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGCCCCAGAAGAGAGATaGAGACTGATAATACAGCCC +
Preference number: 4 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPAPEER*RLIIQP
Trigger: GGGCTGTATTATCAGTCTGCATCTCTCTTCTGGGGC...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
CDS-3UTR GCA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCACAGGTTTCTCTTCTTTaGCTCTGGTGCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPQVSLL*LWCSPV
Trigger: CACTGGTGAGCACCAGAGGCAAAGAAGAGAAACCTG...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGACATATCCAAGGGCCTaGATAGTAACTCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: DQRNINRHNQETSGIPNLTYPRA*IVTHQE
Trigger: TTCCTGATGAGTTACTATGCAGGCCCTTGGATATGT...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGTGGTTTTACCACCTGTaGACATGCCTCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQEWFYHL*TCLSGP
Trigger: AGGCCCTGAGAGGCATGTGCACAGGTGGTAAAACCA...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAACCTCCCTTTCAGTGGTaGAAGATTCATGATCCTGGA +
Preference number: 4 (lower is better)
Translates to: NINRHNQETSGIPNLRCKPPFQW*KIHDPG
Trigger: TCCAGGATCATGAATCTTCCACCACTGAAAGGGAGG...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp AATGTGGACACGATAAAGAATAAGTACTGCCATTTCCTACCGGGGGATAAAAGACCTCCCTTTCAGTGGTaGAAGATTCATGATCCTGGA +
Preference number: 4 (lower is better)
Translates to: NVDTIKNKYCHFLPGDKRPPFQW*KIHDPG
Trigger: TCCAGGATCATGAATCTTCCACCACTGAAAGGGAGG...TCTTTTATCCCCCGGTAGGAAATGGCAGTACTTATTCTTTATCGTGTCCACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
CDS-3UTR CCA 90 bp TATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGACCTCCCTTTCAGTGGTaGAAGATTCATGATCCTGGA +
Preference number: 4 (lower is better)
Translates to: YTRQDQRNINRHNQETSGPPFQW*KIHDPG
Trigger: TCCAGGATCATGAATCTTCCACCACTGAAAGGGAGG...TCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp CAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCTTTCTTCCAATTTCCTaGCTATCTCCTCCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: QDKTRGISIDTIRRPVESFLPIS*LSPPFQ
Trigger: CTGAAAGGGAGGAGATAGCCAGGAAATTGGAAGAAA...GGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp GCCATTTCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGTTTCTTCCAATTTCCTaGCTATCTCCTCCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: AISYRGIKETNQTWSLSVFLPIS*LSPPFQ
Trigger: CTGAAAGGGAGGAGATAGCCAGGAAATTGGAAGAAA...CACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGAAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATTTCTTCCAATTTCCTaGCTATCTCCTCCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGFLPIS*LSPPFQ
Trigger: CTGAAAGGGAGGAGATAGCCAGGAAATTGGAAGAAA...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCATGTAATCCCAGCACTTaGGAGACTGAGGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPCNPST*ETEAGE
Trigger: TTCACCTGCCTCAGTCTCCCAAGTGCTGGGATTACA...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp CCTAAAGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACCATCACATGGCAAGATaGCAAGAGCATGCATGTCAG +
Preference number: 4 (lower is better)
Translates to: PKGYKSKSLFVPTYMSGYHHMAR*QEHACQ
Trigger: CTGACATGCATGCTCTTGCCATCTTGCCATGTGATG...GTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR TCA 90 bp AAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTATGCAGGTGAAAGTCTaGATGTGGGTTGTAGTAACT +
Preference number: 4 (lower is better)
Translates to: KTRGISIDTIRRPVESLTMQVKV*MWVVVT
Trigger: AGTTACTACAACCCACATTCAGACTTTCACCTGCAT...AGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp GTGGGTTGTAGTAACTGCCACACTCACCACATTTATAAAACACCTGTTCTTTGGGAATTCGTTCATGGATaGTGCAGTCATAGCTACAAC +
Preference number: 4 (lower is better)
Translates to: VGCSNCHTHHIYKTPVLWEFVHG*CSHSYN
Trigger: GTTGTAGCTATGACTGCATCATCCATGAACGAATTC...CCAAAGAACAGGTGTTTTATAAATGTGGTGAGTGTGGCAGTTACTACAACCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494154.6
CDS-3UTR TCA 90 bp TCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGAGAATTCTAGTATGCCACTTCTaGTGCTGGATGAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: SYRGIKETNQTWSLSVRILVCHF*CWMKLA
Trigger: TGCAAGTTTCATCCAGCATCAGAAGTGGCATACTAG...AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp TATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGACTAGTATGCCACTTCTaGTGCTGGATGAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: YTRQDQRNINRHNQETSGLVCHF*CWMKLA
Trigger: TGCAAGTTTCATCCAGCATCAGAAGTGGCATACTAG...TCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp CAACAAGTTCCATCCATGTACAGCTTTAGAGATTACTATACTCAGGCATCTACCGTGGAATCCCTAACTTaGGGTGCAAAGGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: QQVPSMYSFRDYYTQASTVESLT*GAKDFE
Trigger: CTCAAAATCCTTTGCACCTCAAGTTAGGGATTCCAC...GGTAGATGCCTGAGTATAGTAATCTCTAAAGCTGTACATGGATGGAACTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGCCTGGGCAACAAAAGTaGAACTCTGTGCACATGCCT +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQEPGQQK*NSVHMP
Trigger: AGGCATGTGCACAGAGTTTCACTTTTGTTGCCCAGG...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429348.6
CDS-3UTR TCA 90 bp AGGAAAACAGTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACGGCATGAGAATCACTTaGACCCTGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RKTVTTYTRQDQRNINRHGMRIT*TLEAEV
Trigger: AACCTCTGCCTCCAGGGTTCAAGTGATTCTCATGCC...GTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTACTGTTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCATTACTTGCTGCATCATaGCATGGCAGGAGGCATCAA +
Preference number: 4 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPLLAAS*HGRRHQ
Trigger: TTGATGCCTCCTGCCATGTCATGATGCAGCAAGTAA...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGGGACTGTCAAATCTGTaGAATCCCCTATCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: DQRNINRHNQETSGIPNLGLSNL*NPLSLF
Trigger: AAACAAAGATAGGGGATTGCACAGATTTGACAGTCC...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp CAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCGGACTGTCAAATCTGTaGAATCCCCTATCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: QDKTRGISIDTIRRPVESGLSNL*NPLSLF
Trigger: AAACAAAGATAGGGGATTGCACAGATTTGACAGTCC...GGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGTCTTTGGCAAAACCCTaGTTTGTAATGAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: DQRNINRHNQETSGIPNLSLAKP*FVMRCV
Trigger: CACACATCTCATTACAAAGCAGGGTTTTGCCAAAGA...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp GACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTATCTTTGGCAAAACCCTaGTTTGTAATGAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: DKTRGISIDTIRRPVESLSLAKP*FVMRCV
Trigger: CACACATCTCATTACAAAGCAGGGTTTTGCCAAAGA...TAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp AGGAAAACAGTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACGAAGAAATACCGAACTaGGGTGGAAGGCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: RKTVTTYTRQDQRNINRHEEIPN*GGRPCH
Trigger: GTGGCAAGGCCTTCCACCGCAGTTCGGTATTTCTTC...GTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTACTGTTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGAATGCTGGATGAAACTTaGATTCCATCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGMLDET*IPSEGF
Trigger: AAAGCCTTCAGATGGAATGCAAGTTTCATCCAGCAT...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGCAGGTTTCTCTTCTTTaGCTCTGGTGCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQEQVSLL*LWCSPV
Trigger: CACTGGTGAGCACCAGAGGCAAAGAAGAGAAACCTG...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp AAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTACATATCCAAGGGCCTaGATAGTAACTCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: KTRGISIDTIRRPVESLTTYPRA*IVTHQE
Trigger: TTCCTGATGAGTTACTATGCAGGCCCTTGGATATGT...AGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp ATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATGTCCCAGTTCCAGTTaGTCTTCCTCTCCTCATAAA +
Preference number: 4 (lower is better)
Translates to: IQDKTRGISIDTIRRPVECPSSS*SSSPHK
Trigger: TTTATGAGGAGAGGAAGAGCAACTGGAACTGGGACA...TTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp TCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGAGAATTTGTCCCAGTTCCAGTTaGTCTTCCTCTCCTCATAAA +
Preference number: 4 (lower is better)
Translates to: SYRGIKETNQTWSLSVRICPSSS*SSSPHK
Trigger: TTTATGAGGAGAGGAAGAGCAACTGGAACTGGGACA...AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATCCACTATCAGTCTGTaGGACTCTGATTCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGSTISL*DSDSLE
Trigger: TTCTAAAGAATCAGAGTCCCACAGACTGATAGTGGA...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp CAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCTCCACTATCAGTCTGTaGGACTCTGATTCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: QDKTRGISIDTIRRPVESSTISL*DSDSLE
Trigger: TTCTAAAGAATCAGAGTCCCACAGACTGATAGTGGA...GGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCACCTCCCTTTCAGTGGTaGAAGATTCATGATCCTGGA +
Preference number: 4 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPPPFQW*KIHDPG
Trigger: TCCAGGATCATGAATCTTCCACCACTGAAAGGGAGG...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp TATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGATCTCCTCCCTTTCAGTaGTGGAAGATTCATGATCCT +
Preference number: 4 (lower is better)
Translates to: YTRQDQRNINRHNQETSGSPPFQ*WKIHDP
Trigger: AGGATCATGAATCTTCCACCACTGAAAGGGAGGAGA...TCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp AAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTTTCTTCCAATTTCCTaGCTATCTCCTCCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: KTRGISIDTIRRPVESLTFLPIS*LSPPFQ
Trigger: CTGAAAGGGAGGAGATAGCCAGGAAATTGGAAGAAA...AGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp ATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGAAACTACAGCAAGTCATaGTCAGGTTTCTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: INRHNQETSGIPNLRCKGNYSKS*SGFSSL
Trigger: CAAAGAAGAGAAACCTGACCATGACTTGCTGTAGTT...TCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp GACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAAATCATAGGGAAATCTaGAGTAGGTGTGAGGACATA +
Preference number: 4 (lower is better)
Translates to: DKTRGISIDTIRRPVESLNHREI*SRCEDI
Trigger: TATGTCCTCACACCTACTCCAGATTTCCCTATGATT...TAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp GAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGCAACAAGAATTTTGCTaGGGATATTCAAACAATAGC +
Preference number: 4 (lower is better)
Translates to: EDISKGLHSNSSGMDSLLQQEFC*GYSNNS
Trigger: GCTATTGTTTGAATATCCCCAGCAAAATTCTTGTTG...CAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
3UTR CAA 72 bp GATCCTGGACTGTCAAATCTGTGCAATCCCCTATCTTaGTTTTATTCCCTGTATCATGTAGCTGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: DPGLSNLCNPLS*FYSLYHVAVTS
Trigger: AGAAGTCACAGCTACATGATACAGGGAATAAAACAAAGATAGGGGATTGCACAGATTTGACAGTCCAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
CDS-3UTR TCA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGAATTCGTTCATGGATaGTGCAGTCATAGCTACAAC +
Preference number: 4 (lower is better)
Translates to: NINRHNQETSGIPNLRCKEFVHG*CSHSYN
Trigger: GTTGTAGCTATGACTGCATCATCCATGAACGAATTC...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp CCTAAAGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACGAATTCGTTCATGGATaGTGCAGTCATAGCTACAAC +
Preference number: 4 (lower is better)
Translates to: PKGYKSKSLFVPTYMSGYEFVHG*CSHSYN
Trigger: GTTGTAGCTATGACTGCATCATCCATGAACGAATTC...GTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCTTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTCTAGTATGCCACTTCTaGTGCTGGATGAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: TYTRQDQRNINRHNQETSLVCHF*CWMKLA
Trigger: TGCAAGTTTCATCCAGCATCAGAAGTGGCATACTAG...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp CCTAAAGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACAGAAGGAACCCAAATTaGAAAACCATATCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PKGYKSKSLFVPTYMSGYRRNPN*KTISPS
Trigger: GGAAGGGGATATGGTTTTTCAATTTGGGTTCCTTCT...GTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCTTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp TCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGAGAATTGAATGGACTCACTTCTaGGAAACTACAGCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SYRGIKETNQTWSLSVRIEWTHF*ETTASH
Trigger: ATGACTTGCTGTAGTTTCTCAGAAGTGAGTCCATTC...AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp TATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAGTGGGTTGTAGTAACTaGCACACTCACCACATTTAT +
Preference number: 4 (lower is better)
Translates to: YTRQDQRNINRHNQETSGVGCSN*HTHHIY
Trigger: ATAAATGTGGTGAGTGTGGCAGTTACTACAACCCAC...TCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp AAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTATGCTGGATGAAACTTaGATTCCATCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KTRGISIDTIRRPVESLTMLDET*IPSEGF
Trigger: AAAGCCTTCAGATGGAATGCAAGTTTCATCCAGCAT...AGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp AATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATTTATGCTGGATGAAACTTaGATTCCATCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: NRHNQETSGIPNLRCKGFMLDET*IPSEGF
Trigger: AAAGCCTTCAGATGGAATGCAAGTTTCATCCAGCAT...AAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp TCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGAGAAACTACGAAACTAATCAAACATaGTCCTTAAGCGTGAGAATT +
Preference number: 4 (lower is better)
Translates to: SKGLHSNSSGMDSLLRNYETNQT*SLSVRI
Trigger: AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTC...GTAGTTTCTCAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp AGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACTGAAACCTCATTCTCAGTCTTaGTTTTACCACCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: RVQVQVTFCTYIYEWVLKPHSQS*FYHLCT
Trigger: TGTGCACAGGTGGTAAAACCAAGACTGAGAATGAGG...TTTCAGTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTCCTCATTCTCAGTCTTaGTTTTACCACCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: TYTRQDQRNINRHNQETSPHSQS*FYHLCT
Trigger: TGTGCACAGGTGGTAAAACCAAGACTGAGAATGAGG...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp AGGAAAACAGTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACGAATGGAAATGCTGCTaGAACCACACTGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RKTVTTYTRQDQRNINRHEWKCC*NHTVWS
Trigger: GCTCCAGACAGTGTGGTTCCAGCAGCATTTCCATTC...GTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTACTGTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456778.5
CDS-3UTR TCA 90 bp ACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCATGCAGGTGAAAGTCTaGATGTGGGTTGTAGTAACT +
Preference number: 4 (lower is better)
Translates to: TTYTRQDQRNINRHNQETMQVKV*MWVVVT
Trigger: AGTTACTACAACCCACATTCAGACTTTCACCTGCAT...GGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTATGCAGGTGAAAGTCTaGATGTGGGTTGTAGTAACT +
Preference number: 4 (lower is better)
Translates to: TYTRQDQRNINRHNQETSMQVKV*MWVVVT
Trigger: AGTTACTACAACCCACATTCAGACTTTCACCTGCAT...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGGTGGAATCCCTAACTTaGGGTGCAAAGGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQEVESLT*GAKDFE
Trigger: CTCAAAATCCTTTGCACCTCAAGTTAGGGATTCCAC...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp ATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAAGGACTGTCAAATCTGTaGAATCCCCTATCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: IQDKTRGISIDTIRRPVEGLSNL*NPLSLF
Trigger: AAACAAAGATAGGGGATTGCACAGATTTGACAGTCC...TTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp AATGTGGACACGATAAAGAATAAGTACTGCCATTTCCTACCGGGGGATAAAAGAATGCTGGATGAAACTTaGATTCCATCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: NVDTIKNKYCHFLPGDKRMLDET*IPSEGF
Trigger: AAAGCCTTCAGATGGAATGCAAGTTTCATCCAGCAT...TCTTTTATCCCCCGGTAGGAAATGGCAGTACTTATTCTTTATCGTGTCCACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
CDS-3UTR CCA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAATCCACTATCAGTCTGTaGGACTCTGATTCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: NINRHNQETSGIPNLRCKSTISL*DSDSLE
Trigger: TTCTAAAGAATCAGAGTCCCACAGACTGATAGTGGA...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGTCTCCTCCCTTTCAGTaGTGGAAGATTCATGATCCT +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQESPPFQ*WKIHDP
Trigger: AGGATCATGAATCTTCCACCACTGAAAGGGAGGAGA...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGCCTCATTCTCAGTCTTaGTTTTACCACCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQEPHSQS*FYHLCT
Trigger: TGTGCACAGGTGGTAAAACCAAGACTGAGAATGAGG...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp AGGAAAACAGTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACGTGGTGGAAGATTCATaGTCCTGGACTGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: RKTVTTYTRQDQRNINRHVVEDS*SWTVKS
Trigger: AGATTTGACAGTCCAGGATCATGAATCTTCCACCAC...GTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTACTGTTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR TCA 90 bp AGGAAAACAGTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACCTAGTATGCCACTTCTaGTGCTGGATGAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: RKTVTTYTRQDQRNINRHLVCHF*CWMKLA
Trigger: TGCAAGTTTCATCCAGCATCAGAAGTGGCATACTAG...GTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTACTGTTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGACTGTCAAATCTGTaGAATCCCCTATCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TYTRQDQRNINRHNQETSGLSNL*NPLSLF
Trigger: AAACAAAGATAGGGGATTGCACAGATTTGACAGTCC...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp ACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCTCTTTGGCAAAACCCTaGTTTGTAATGAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: TTYTRQDQRNINRHNQETSLAKP*FVMRCV
Trigger: CACACATCTCATTACAAAGCAGGGTTTTGCCAAAGA...GGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCATCTTTGGCAAAACCCTaGTTTGTAATGAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPSLAKP*FVMRCV
Trigger: CACACATCTCATTACAAAGCAGGGTTTTGCCAAAGA...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTATGCTGGATGAAACTTaGATTCCATCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: TYTRQDQRNINRHNQETSMLDET*IPSEGF
Trigger: AAAGCCTTCAGATGGAATGCAAGTTTCATCCAGCAT...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR GCA 90 bp ACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCATAAAGAATAAGTACTaGCATTTCCTACCGGGGGAT +
Preference number: 4 (lower is better)
Translates to: TTYTRQDQRNINRHNQETIKNKY*HFLPGD
Trigger: ATCCCCCGGTAGGAAATGGCAGTACTTATTCTTTAT...GGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
CDS-3UTR CCA 90 bp ATGTGGGTTGTAGTAACTGCCACACTCACCACATTTATAAAACACCTGTTCTTTTCCACTATCAGTCTGTaGGACTCTGATTCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: MWVVVTATLTTFIKHLFFSTISL*DSDSLE
Trigger: TTCTAAAGAATCAGAGTCCCACAGACTGATAGTGGA...AAAGAACAGGTGTTTTATAAATGTGGTGAGTGTGGCAGTTACTACAACCCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494154.6
CDS-3UTR CCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGTTTCTTCCAATTTCCTaGCTATCTCCTCCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQEFLPIS*LSPPFQ
Trigger: CTGAAAGGGAGGAGATAGCCAGGAAATTGGAAGAAA...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp AATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATTTGAAACTAATCAAACATaGTCCTTAAGCGTGAGAATT +
Preference number: 4 (lower is better)
Translates to: NRHNQETSGIPNLRCKGFETNQT*SLSVRI
Trigger: AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTC...AAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp GTGGGTTGTAGTAACTGCCACACTCACCACATTTATAAAACACCTGTTCTTTGGGAAACTAATCAAACATaGTCCTTAAGCGTGAGAATT +
Preference number: 4 (lower is better)
Translates to: VGCSNCHTHHIYKTPVLWETNQT*SLSVRI
Trigger: AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTC...CCAAAGAACAGGTGTTTTATAAATGTGGTGAGTGTGGCAGTTACTACAACCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494154.6
CDS-3UTR CCA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTAATCATAGGGAAATCTaGAGTAGGTGTGAGGACATA +
Preference number: 4 (lower is better)
Translates to: TYTRQDQRNINRHNQETSNHREI*SRCEDI
Trigger: TATGTCCTCACACCTACTCCAGATTTCCCTATGATT...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR GCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGTCTTTGGCAAAACCCTaGTTTGTAATGAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQESLAKP*FVMRCV
Trigger: CACACATCTCATTACAAAGCAGGGTTTTGCCAAAGA...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGTCCACTATCAGTCTGTaGGACTCTGATTCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: VTTYTRQDQRNINRHNQESTISL*DSDSLE
Trigger: TTCTAAAGAATCAGAGTCCCACAGACTGATAGTGGA...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGAAACTAATCAAACATaGTCCTTAAGCGTGAGAATT +
Preference number: 4 (lower is better)
Translates to: NINRHNQETSGIPNLRCKETNQT*SLSVRI
Trigger: AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTC...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp TCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGAGAATTGAAACTAATCAAACATaGTCCTTAAGCGTGAGAATT +
Preference number: 4 (lower is better)
Translates to: SYRGIKETNQTWSLSVRIETNQT*SLSVRI
Trigger: AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTC...AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CCA 90 bp CCTAAAGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACACCTACATATATGAGTaGGTACTGAAATTCAACAGA +
Preference number: 4 (lower is better)
Translates to: PKGYKSKSLFVPTYMSGYTYIYE*VLKFNR
Trigger: TCTGTTGAATTTCAGTACCCACTCATATATGTAGGT...GTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCTTTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp AATGTGGACACGATAAAGAATAAGTACTGCCATTTCCTACCGGGGGATAAAAGACAACAAGAATTTTGCTaGGGATATTCAAACAATAGC +
Preference number: 4 (lower is better)
Translates to: NVDTIKNKYCHFLPGDKRQQEFC*GYSNNS
Trigger: GCTATTGTTTGAATATCCCCAGCAAAATTCTTGTTG...TCTTTTATCCCCCGGTAGGAAATGGCAGTACTTATTCTTTATCGTGTCCACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR TCA 90 bp AGGAAAACAGTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACATTGGACACTTTATCTaGTTATGTTCTCCCATAGGC +
Preference number: 4 (lower is better)
Translates to: RKTVTTYTRQDQRNINRHIGHFI*LCSPIG
Trigger: GCCTATGGGAGAACATAATCAGATAAAGTGTCCAAT...GTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTACTGTTTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CCA 90 bp TCAGTTCCAAAGCCACTTCTACATTTTTATGTAAATGTCAGAGCAGCAAACCTACAACAAGAATTTTGCTaGGGATATTCAAACAATAGC +
Preference number: 4 (lower is better)
Translates to: SVPKPLLHFYVNVRAANLQQEFC*GYSNNS
Trigger: GCTATTGTTTGAATATCCCCAGCAAAATTCTTGTTG...TAGGTTTGCTGCTCTGACATTTACATAAAAATGTAGAAGTGGCTTTGGAACTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR CCA 90 bp AGGAAAACAGTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACCAGCAAACCTACTTATaGCTATCAATATTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RKTVTTYTRQDQRNINRHQQTYL*LSIFCL
Trigger: AAGACAGAATATTGATAGCCATAAGTAGGTTTGCTG...GTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTACTGTTTTCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS GCA 90 bp ACCAGGAACCTTCTCAGTTCTCTCTGTATCCAGAGGAAAGCCCCCTaGAGTTGGGTCTCCATTAGGAACCAGGGAAGAGAAAAGTCACAA +
Preference number: 5 (lower is better)
Translates to: TRNLLSSLCIQRKAP*SWVSIRNQGREKSQ
Trigger: TTGTGACTTTTCTCTTCCCTGGTTCCTAATGGAGACCCAACTGCAGGGGGCTTTCCTCTGGATACAGAGAGAACTGAGAAGGTTCCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494154.6
CDS-3UTR CAA 90 bp TTTAGCTCATGGTTCCGAGGGCTGGGAACTGTGGAGGGGCCGTATCTGGCCTTCTGCAATCCCCTATCTTaGTTTTATTCCCTGTATCAT +
Preference number: 5 (lower is better)
Translates to: FSSWFRGLGTVEGPYLAFCNPLS*FYSLYH
Trigger: ATGATACAGGGAATAAAACAAAGATAGGGGATTGCA...GAAGGCCAGATACGGCCCCTCCACAGTTCCCAGCCCTCGGAACCATGAGCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR CAA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGTTCTCTAACCTGTCCTaGAAGTCAGGGTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: DQRNINRHNQETSGIPNLFSNLS*KSGCWG
Trigger: TCCCCAGCACCCTGACTTCAAGGACAGGTTAGAGAA...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp GACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTATTCTCTAACCTGTCCTaGAAGTCAGGGTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: DKTRGISIDTIRRPVESLFSNLS*KSGCWG
Trigger: TCCCCAGCACCCTGACTTCAAGGACAGGTTAGAGAA...TAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGTGGACAGGTGAAGGGTaGGCCTTTTCAGATGAGGGA +
Preference number: 5 (lower is better)
Translates to: DQRNINRHNQETSGIPNLWTGEG*AFSDEG
Trigger: TCCCTCATCTGAAAAGGCCAACCCTTCACCTGTCCA...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp GCCATTTCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGTGGACAGGTGAAGGGTaGGCCTTTTCAGATGAGGGA +
Preference number: 5 (lower is better)
Translates to: AISYRGIKETNQTWSLSVWTGEG*AFSDEG
Trigger: TCCCTCATCTGAAAAGGCCAACCCTTCACCTGTCCA...CACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGAAATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGTGAAGATCACGCCATaGCACTCCAGCCTGTGCACA +
Preference number: 5 (lower is better)
Translates to: NINRHNQETSGIPNLRCKVKITP*HSSLCT
Trigger: TGTGCACAGGCTGGAGTGCAATGGCGTGATCTTCAC...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314686.9
CDS-3UTR CAA 90 bp ATGACATGGCAGGAGGCATCAAAAGGCAAGACAGAGCAAGCATGTGTCCCAGTTGAGAAGGAACCCAAATaGAAAAACCATATCCCCTTC +
Preference number: 5 (lower is better)
Translates to: MTWQEASKGKTEQACVPVEKEPK*KNHIPF
Trigger: GAAGGGGATATGGTTTTTCAATTTGGGTTCCTTCTC...AACTGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CAA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAATTCTCTAACCTGTCCTaGAAGTCAGGGTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: NINRHNQETSGIPNLRCKFSNLS*KSGCWG
Trigger: TCCCCAGCACCCTGACTTCAAGGACAGGTTAGAGAA...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp GGGAAATCTGGAGTAGGTGTGAGGACATATCCAAGGGCCTGCATAGTAACTCATAACCAGAGTGATCTTTaGACTGAATGTCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: GKSGVGVRTYPRACIVTHNQSDL*TECLPT
Trigger: TGTGGGAAGACATTCAGTCAAAAGATCACTCTGGTT...ATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGATTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CAA 90 bp AACTACAGCAAGTCATGGTCAGGTTTCTCTTCTTTGCCTCTGGTGCTCACCAGTAACCAGAGTGATCTTTaGACTGAATGTCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: NYSKSWSGFSSLPLVLTSNQSDL*TECLPT
Trigger: TGTGGGAAGACATTCAGTCAAAAGATCACTCTGGTT...ACTGGTGAGCACCAGAGGCAAAGAAGAGAAACCTGACCATGACTTGCTGTAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CAA 90 bp GAGGACATATCCAAGGGCCTGCATAGTAACTCATCAGGAATGGACTCACTTCTGGATAGCCCTGTTCCATaGATGAGTTTCTTCCTAGTA +
Preference number: 5 (lower is better)
Translates to: EDISKGLHSNSSGMDSLLDSPVP*MSFFLV
Trigger: TACTAGGAAGAAACTCATCAATGGAACAGGGCTATC...CAGAAGTGAGTCCATTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CAA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAATGGACAGGTGAAGGGTaGGCCTTTTCAGATGAGGGA +
Preference number: 5 (lower is better)
Translates to: NINRHNQETSGIPNLRCKWTGEG*AFSDEG
Trigger: TCCCTCATCTGAAAAGGCCAACCCTTCACCTGTCCA...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCATTCTCTAACCTGTCCTaGAAGTCAGGGTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPFSNLS*KSGCWG
Trigger: TCCCCAGCACCCTGACTTCAAGGACAGGTTAGAGAA...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCATGGACAGGTGAAGGGTaGGCCTTTTCAGATGAGGGA +
Preference number: 5 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPWTGEG*AFSDEG
Trigger: TCCCTCATCTGAAAAGGCCAACCCTTCACCTGTCCA...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp AATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATTTCCGTATCTGGCCTTCTaGCTGTGTCATAACATGATG +
Preference number: 5 (lower is better)
Translates to: NRHNQETSGIPNLRCKGFPYLAF*LCHNMM
Trigger: CATCATGTTATGACACAGCAAGAAGGCCAGATACGG...AAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR CAA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAACCAGAGTGATCTTTaGACTGAATGTCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: DQRNINRHNQETSGIPNLNQSDL*TECLPT
Trigger: TGTGGGAAGACATTCAGTCAAAAGATCACTCTGGTT...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp GACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAGATAGCCCTGTTCCATaGATGAGTTTCTTCCTAGTA +
Preference number: 5 (lower is better)
Translates to: DKTRGISIDTIRRPVESLDSPVP*MSFFLV
Trigger: TACTAGGAAGAAACTCATCAATGGAACAGGGCTATC...TAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp GCCATTTCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGGATAGCCCTGTTCCATaGATGAGTTTCTTCCTAGTA +
Preference number: 5 (lower is better)
Translates to: AISYRGIKETNQTWSLSVDSPVP*MSFFLV
Trigger: TACTAGGAAGAAACTCATCAATGGAACAGGGCTATC...CACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGAAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp TCAGTTCCAAAGCCACTTCTACATTTTTATGTAAATGTCAGAGCAGCAAACCTATGGACAGGTGAAGGGTaGGCCTTTTCAGATGAGGGA +
Preference number: 5 (lower is better)
Translates to: SVPKPLLHFYVNVRAANLWTGEG*AFSDEG
Trigger: TCCCTCATCTGAAAAGGCCAACCCTTCACCTGTCCA...TAGGTTTGCTGCTCTGACATTTACATAAAAATGTAGAAGTGGCTTTGGAACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR CAA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGTGTATCCTTGTCATTTaGTTAAGCAGGCTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: DQRNINRHNQETSGIPNLCILVI*LSRLRR
Trigger: CCTTCTCAGCCTGCTTAACAAAATGACAAGGATACA...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432264.4
CDS-3UTR CAA 90 bp GACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTATGCAATCCCCTATCTTaGTTTTATTCCCTGTATCAT +
Preference number: 5 (lower is better)
Translates to: DKTRGISIDTIRRPVESLCNPLS*FYSLYH
Trigger: ATGATACAGGGAATAAAACAAAGATAGGGGATTGCA...TAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp GACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGTGCAATCCCCTATCTTaGTTTTATTCCCTGTATCAT +
Preference number: 5 (lower is better)
Translates to: DQRNINRHNQETSGIPNLCNPLS*FYSLYH
Trigger: ATGATACAGGGAATAAAACAAAGATAGGGGATTGCA...CAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp CCTAAAGGGTACAAGTCCAAGTCACTTTTTGTACCTACATATATGAGTGGGTACGATAGCCCTGTTCCATaGATGAGTTTCTTCCTAGTA +
Preference number: 5 (lower is better)
Translates to: PKGYKSKSLFVPTYMSGYDSPVP*MSFFLV
Trigger: TACTAGGAAGAAACTCATCAATGGAACAGGGCTATC...GTACCCACTCATATATGTAGGTACAAAAAGTGACTTGGACTTGTACCCTTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CAA 90 bp ATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAAGATAGCCCTGTTCCATaGATGAGTTTCTTCCTAGTA +
Preference number: 5 (lower is better)
Translates to: IQDKTRGISIDTIRRPVEDSPVP*MSFFLV
Trigger: TACTAGGAAGAAACTCATCAATGGAACAGGGCTATC...TTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp TCCTACCGGGGGATAAAAGAAACTAATCAAACATGGTCCTTAAGCGTGAGAATTGATAGCCCTGTTCCATaGATGAGTTTCTTCCTAGTA +
Preference number: 5 (lower is better)
Translates to: SYRGIKETNQTWSLSVRIDSPVP*MSFFLV
Trigger: TACTAGGAAGAAACTCATCAATGGAACAGGGCTATC...AATTCTCACGCTTAAGGACCATGTTTGATTAGTTTCTTTTATCCCCCGGTAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp ATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGGAAGAGAAGGAACCCAAATaGAAAAACCATATCCCCTTC +
Preference number: 5 (lower is better)
Translates to: IQDKTRGISIDTIRRPVEEKEPK*KNHIPF
Trigger: GAAGGGGATATGGTTTTTCAATTTGGGTTCCTTCTC...TTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CAA 90 bp AATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAAGGATTTTGCAATCCCCTATCTTaGTTTTATTCCCTGTATCAT +
Preference number: 5 (lower is better)
Translates to: NRHNQETSGIPNLRCKGFCNPLS*FYSLYH
Trigger: ATGATACAGGGAATAAAACAAAGATAGGGGATTGCA...AAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp CAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAAACCAGAGTGATCTTTaGACTGAATGTCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: QLIQDKTRGISIDTIRRPNQSDL*TECLPT
Trigger: TGTGGGAAGACATTCAGTCAAAAGATCACTCTGGTT...TGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp ACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGACCAGTGAGAAGGAACCCAAATaGAAAAACCATATCCCCTTC +
Preference number: 5 (lower is better)
Translates to: TYTRQDQRNINRHNQETSEKEPK*KNHIPF
Trigger: GAAGGGGATATGGTTTTTCAATTTGGGTTCCTTCTC...ACTGGTCTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
CDS-3UTR CAA 90 bp AATATCAATAGACACAATCAGGAGACCAGTGGAATCCCTAACTTGAGGTGCAAATGCAATCCCCTATCTTaGTTTTATTCCCTGTATCAT +
Preference number: 5 (lower is better)
Translates to: NINRHNQETSGIPNLRCKCNPLS*FYSLYH
Trigger: ATGATACAGGGAATAAAACAAAGATAGGGGATTGCA...TTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS-3UTR CAA 90 bp GTAACAACTTATACAAGACAAGACCAGAGGAATATCAATAGACACAATCAGGAGAACCAGAGTGATCTTTaGACTGAATGTCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: VTTYTRQDQRNINRHNQENQSDL*TECLPT
Trigger: TGTGGGAAGACATTCAGTCAAAAGATCACTCTGGTT...CTCCTGATTGTGTCTATTGATATTCCTCTGGTCTTGTCTTGTATAAGTTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000494154.6
CDS TCA 72 bp CGGGCCCCTCGGCGACCTCTGCAAGGGCCCAAAGCCTaGCCTCCAGAACAGGTAGCCGAGTCAGGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: RAPRRPLQGPKA*PPEQVAESGKP
Trigger: GGGCTTCCCTGACTCGGCTACCTGTTCTGGAGGTCAGGCTTTGGGCCCTTGCAGAGGTCGCCGAGGGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314686.9
ENST00000429348.6
ENST00000432264.4
ENST00000447116.6
ENST00000456778.5
ENST00000462961.5
ENST00000494154.6
ENST00000520737.5
CDS CAA 90 bp CTAAGAGAGAACCACAATGAGACTGATCTGTCTCGTCTCCTACACTaGCCGCCTCTTCCCCTCTGTCTCCTGCCACTAGCATTGCAGATA +
Preference number: 6 (lower is better)
Translates to: LRENHNETDLSRLLH*PPLPLCLLPLALQI
Trigger: TATCTGCAATGCTAGTGGCAGGAGACAGAGGGGAAGAGGCGGCAAGTGTAGGAGACGAGACAGATCAGTCTCATTGTGGTTCTCTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522736.5