RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF615 (Homo sapiens)

Ensembl gene IDs: ENSG00000197619

Ensembl transcript IDs: ENST00000376716.9, ENST00000391795.7, ENST00000593650.5, ENST00000594083.5, ENST00000595114.1, ENST00000597747.5, ENST00000597905.5, ENST00000598071.6, ENST00000599115.5, ENST00000599177.5, ENST00000599631.5, ENST00000601178.5, ENST00000602063.5, ENST00000618049.4, ENST00000618487.4

Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TACTTTGATTTTGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTaGTTTCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTG +
Preference number: 1 (lower is better)
Translates to: YFDFASDAAEDHQFS*FLFGTMFTTWVTGL
Trigger: CAATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGAAATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599115.5
ENST00000599177.5
3UTR-3UTR TCA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTTTTATTCATGATCTATaGTCACTTCTGAGGGGGTTT +
Preference number: 2 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSFIHDL*SLLRGF
Trigger: AAACCCCCTCAGAAGTGATCATAGATCATGAATAAA...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR-3UTR GCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGCCTGCCACAGGGGTTTaGCAGAGGAAAGTATTTCTC +
Preference number: 2 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLPATGV*QRKVFL
Trigger: GAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGG...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR-3UTR GCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGAAAAGATTTCTGATTaGCAAGGGTTAGGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLEKISD*QGLGLR
Trigger: CCTCAGCCCTAACCCTTGGCAATCAGAAATCTTTTC...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR-3UTR CCA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGACTAATGTCCTTCAGTaGGTGAATAAACAAATAGTG +
Preference number: 2 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRTNVLQ*VNKQIV
Trigger: CACTATTTGTTTATTCACCCACTGAAGGACATTAGT...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR-3UTR TCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGCGATTACGGTGGTGGTaGCATGAATCAATATATGTG +
Preference number: 2 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLRLRWW*HESIYV
Trigger: CACATATATTGATTCATGTCACCACCACCGTAATCG...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR-3UTR TCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGATTGATGCAACATTCTaGATCTCGATTACGGTGGTG +
Preference number: 2 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLIDATF*ISITVV
Trigger: CACCACCGTAATCGAGATTCAGAATGTTGCATCAAT...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR-3UTR CCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGATCTTTGGAAGAAGCTaGGTTAAGGGCAAGAACTCT +
Preference number: 2 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLIFGRS*VKGKNS
Trigger: AGAGTTCTTGCCCTTAACCCAGCTTCTTCCAAAGAT...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR CAA 90 bp CAATTTCACTTTCCTGTATTTGGTAATGAACTATGCTTATGTAAGTaGTTATCTTTGGAAGAAGCTGGGTTAAGGGCAAGAACTCTGGAA +
Preference number: 2 (lower is better)
Translates to: QFHFPVFGNELCLCK*LSLEEAGLRARTLE
Trigger: TTCCAGAGTTCTTGCCCTTAACCCAGCTTCTTCCAAAGATAACAACTTACATAAGCATAGTTCATTACCAAATACAGGAAAGTGAAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR CAA 90 bp ATTCTGTTCATGGCACTGTTTCACACTCTTCTGAATACTTTGATTTaGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTGATTTCTAT +
Preference number: 2 (lower is better)
Translates to: ILFMALFHTLLNTLI*QVMLQRIINFPDFY
Trigger: ATAGAAATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCATGAACAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599115.5
ENST00000599177.5
3UTR-3UTR TCA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTATTTATTCATGATCTATaGTCACTTCTGAGGGGGTTT +
Preference number: 2 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLFIHDL*SLLRGF
Trigger: AAACCCCCTCAGAAGTGATCATAGATCATGAATAAA...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR-3UTR TCA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACAAAATGACTACCTGTaGATTCTCCTGTGTTTAACA +
Preference number: 2 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLQNDYL*ILLCLT
Trigger: TGTTAAACACAGGAGAATTCACAGGTAGTCATTTTG...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
3UTR-3UTR CCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGACTAATGTCCTTCAGTaGGTGAATAAACAAATAGTG +
Preference number: 2 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLTNVLQ*VNKQIV
Trigger: CACTATTTGTTTATTCACCCACTGAAGGACATTAGT...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR CAA 90 bp TTTCCTGTATTTGGTAATGAACTATGCTTATGTAAGTTGTTATCTTaGGAAGAAGCTGGGTTAAGGGCAAGAACTCTGGAATATTTTGGT +
Preference number: 2 (lower is better)
Translates to: FPVFGNELCLCKLLS*EEAGLRARTLEYFG
Trigger: ACCAAAATATTCCAGAGTTCTTGCCCTTAACCCAGCTTCTTCCAAAGATAACAACTTACATAAGCATAGTTCATTACCAAATACAGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR-3UTR CCA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTAATATGCAGAACAACTTaGATGGATTTCAGGTTAATC +
Preference number: 2 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLICRTT*MDFRLI
Trigger: GATTAACCTGAAATCCATCCAAGTTGTTCTGCATAT...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR-3UTR CAA 90 bp TGGGAACACAGGGACATCAAGACAGGAACAATAGACACTGGGGACTCCAAGAGGGGAGGAAGGCAAGGGTaGAAGAACCACCTATTTGGT +
Preference number: 3 (lower is better)
Translates to: WEHRDIKTGTIDTGDSKRGGRQG*KNHLFG
Trigger: ACCAAATAGGTGGTTCTTCAACCCTTGCCTTCCTCC...CCTCTTGGAGTCCCCAGTGTCTATTGTTCCTGTCTTGATGTCCCTGTGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597747.5
3UTR-3UTR CAA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGCTCTCATCCATCATTTaGCCAAGGCTTCTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRLSSII*PRLLSF
Trigger: GAAGGAAAGAAGCCTTGGCAAAATGATGGATGAGAG...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR-3UTR CAA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGCCCTGCCACAGGGGTTaGCCAGAGGAAAGTATTTCT +
Preference number: 3 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLPCHRG*PEESIS
Trigger: AGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGG...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR-3UTR CAA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGCTGAATACTTTGATTTaGCAAGTGATGCTGCAGAGG +
Preference number: 3 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRLNTLI*QVMLQR
Trigger: CCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAG...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599177.5
3UTR-3UTR CAA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGTGTAAGTTGTTATCTTaGGAAGAAGCTGGGTTAAGG +
Preference number: 3 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRCKLLS*EEAGLR
Trigger: CCTTAACCCAGCTTCTTCCAAAGATAACAACTTACA...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR GCA 72 bp ACTAATGACAAAACTAAAGATGAAAAGATTTCTGATTaGCAAGGGTTAGGGCTGAGGAGAGGTTGTGACTAT +
Preference number: 3 (lower is better)
Translates to: TNDKTKDEKISD*QGLGLRRGCDY
Trigger: ATAGTCACAACCTCTCCTCAGCCCTAACCCTTGGCAATCAGAAATCTTTTCATCTTTAGTTTTGTCATTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
3UTR-3UTR CAA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGATATGCAGAACAACTaGGATGGATTTCAGGTTAAT +
Preference number: 3 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLDMQNN*DGFQVN
Trigger: ATTAACCTGAAATCCATCCAAGTTGTTCTGCATATC...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCGGCCTCCTCAGTGCCTaGCGGCGACTATCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ENPATGVCQRKVFLQCELGLLSA*RRLSRV
Trigger: GACCCTGGATAGTCGCCGTCAGGCACTGAGGAGGCC...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000598071.6
ENST00000599177.5
CDS-3UTR CCA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCGTTCCCAGAACTTGGTaGGCTCCGGCCTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: ENPATGVCQRKVFLQCELVPRTW*APASSL
Trigger: GAGAGATGAGGCCGGAGCCCACCAAGTTCTGGGAAC...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594083.5
ENST00000599177.5
CDS-3UTR TCA 90 bp GCACTGTTTCACACTCTTCTGAATACTTTGATTTTGCAAGTGATGCTGCAGAGGGGCCTCCTCAGTGCCTaGCGGCGACTATCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ALFHTLLNTLILQVMLQRGLLSA*RRLSRV
Trigger: GACCCTGGATAGTCGCCGTCAGGCACTGAGGAGGCC...CCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CCA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCGAACTTCCCAGAACTTaGTGGGCTCCGGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: ENPATGVCQRKVFLQCELELPRT*WAPASS
Trigger: AGATGAGGCCGGAGCCCACCAAGTTCTGGGAAGTTC...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376716.9
ENST00000598071.6
CDS-3UTR GCA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTTCTCGGCCTCCTCAGTaGCTGACGGCGACTATCCAG +
Preference number: 4 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHISRPPQ*LTATIQ
Trigger: CTGGATAGTCGCCGTCAGGCACTGAGGAGGCCGAGA...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000598071.6
ENST00000599177.5
CDS-3UTR CCA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGTGGGTTCCCAGAACTTaGTGGGCTCCGGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRWVPRT*WAPASS
Trigger: AGATGAGGCCGGAGCCCACCAAGTTCTGGGAACCCA...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594083.5
ENST00000599177.5
CDS-3UTR CCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCGGCGTCGCCAAACGCTaGCGCCGACAGATACCAGTC +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGGVAKR*RRQIPV
Trigger: GACTGGTATCTGTCGGCGCCAGCGTTTGGCGACGCC...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602063.5
CDS-3UTR CCA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTCTGAAAGAATTCCACTaGCGTCGCCAAACGCTGGCG +
Preference number: 4 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSLKEFH*RRQTLA
Trigger: CGCCAGCGTTTGGCGACGCCAGTGGAATTCTTTCAG...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602063.5
CDS-3UTR TCA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTGGCCTCCTCAGTGCCTaGCGGCGACTATCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFGLLSA*RRLSRV
Trigger: GACCCTGGATAGTCGCCGTCAGGCACTGAGGAGGCC...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000598071.6
ENST00000599177.5
CDS-3UTR TCA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTCCCACGCTAAGCTCCTaGAAGAATTCCACTGGCGTC +
Preference number: 4 (lower is better)
Translates to: FTENPATGVCQRKVFLQCPTLSS*KNSTGV
Trigger: GACGCCAGTGGAATTCTTTCAGGAGCTTAGCGTGGG...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602063.5
CDS-3UTR GCA 90 bp GCACTGTTTCACACTCTTCTGAATACTTTGATTTTGCAAGTGATGCTGCAGAGGTCTCGGCCTCCTCAGTaGCTGACGGCGACTATCCAG +
Preference number: 4 (lower is better)
Translates to: ALFHTLLNTLILQVMLQRSRPPQ*LTATIQ
Trigger: CTGGATAGTCGCCGTCAGGCACTGAGGAGGCCGAGA...CCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CCA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCTTCCCAGAACTTGGTaGGCTCCGGCCTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHILPRTW*APASSL
Trigger: GAGAGATGAGGCCGGAGCCCACCAAGTTCTGGGAAG...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000598071.6
CDS-3UTR CCA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCATGACACCCAAGTCTTaGAAACTCCGCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ENPATGVCQRKVFLQCELMTPKS*KLRLLP
Trigger: AGGAAGGAGGCGGAGTTTCCAAGACTTGGGTGTCAT...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp GGAACACAGGGACATCAAGACAGGAACAATAGACACTGGGGACTCCAAGAGGAAAGTGTTAGGGATTCCTaGGCCTGCATCATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GTQGHQDRNNRHWGLQEESVRDS*ACIIVS
Trigger: GGAGACAATGATGCAGGCCCAGGAATCCCTAACACT...TTCCTCTTGGAGTCCCCAGTGTCTATTGTTCCTGTCTTGATGTCCCTGTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597747.5
CDS-3UTR TCA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTAGGCCTCCTCAGTGCCTaGCGGCGACTATCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLGLLSA*RRLSRV
Trigger: GACCCTGGATAGTCGCCGTCAGGCACTGAGGAGGCC...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000598071.6
ENST00000599177.5
CDS-3UTR GCA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCTCTCGGCCTCCTCAGTaGCTGACGGCGACTATCCAG +
Preference number: 4 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFSRPPQ*LTATIQ
Trigger: CTGGATAGTCGCCGTCAGGCACTGAGGAGGCCGAGA...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376716.9
ENST00000598071.6
ENST00000599177.5
CDS-3UTR GCA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGGGCTTGATACCCCACTaGCACCAGGTTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRGLIPH*HQVAVV
Trigger: AACTACAGCAACCTGGTGGCAGTGGGGTATCAAGCC...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR GCA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTCCTGCCACAGGGGTTTaGCAGAGGAAAGTATTTCTC +
Preference number: 4 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSPATGV*QRKVFL
Trigger: GAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGG...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCCAGCACCTGTGGGCATaGCAGAGATGTTATCTTACT +
Preference number: 4 (lower is better)
Translates to: ENPATGVCQRKVFLQCELQHLWA*QRCYLT
Trigger: AGTAAGATAACATCTCTGCCATGCCCACAGGTGCTG...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376716.9
ENST00000598071.6
ENST00000602063.5
CDS-3UTR CCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCGTTCCCAGAACTTGGTaGGCTCCGGCCTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGVPRTW*APASSL
Trigger: GAGAGATGAGGCCGGAGCCCACCAAGTTCTGGGAAC...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594083.5
ENST00000599177.5
CDS-3UTR TCA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTGGTCACTCTTCATGGTaGAACCTTTTCGACATTCGG +
Preference number: 4 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSGHSSW*NLFDIR
Trigger: CCGAATGTCGAAAAGGTTTCACCATGAAGAGTGACC...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCCGATGTACATTGAGATaGCTCTTCTCAGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ENPATGVCQRKVFLQCELRCTLR*LFSVKP
Trigger: AGGCTTCACTGAGAAGAGTCATCTCAATGTACATCG...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR GCA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTTCTCGGCCTCCTCAGTaGCTGACGGCGACTATCCAG +
Preference number: 4 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFSRPPQ*LTATIQ
Trigger: CTGGATAGTCGCCGTCAGGCACTGAGGAGGCCGAGA...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000598071.6
ENST00000599177.5
CDS-3UTR CCA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCAATTCTTCCCAGAACTTaGTGGGCTCCGGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPILPRT*WAPASS
Trigger: AGATGAGGCCGGAGCCCACCAAGTTCTGGGAAGAAT...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391795.7
CDS-3UTR CCA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGCTGATGTCTGATGAGTaGGCTCTTCAAAGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRLMSDE*ALQSEA
Trigger: GGCTTCGCTTTGAAGAGCCCACTCATCAGACATCAG...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTCTGATGTCTGATGAGTaGGCTCTTCAAAGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: FTENPATGVCQRKVFLQCLMSDE*ALQSEA
Trigger: GGCTTCGCTTTGAAGAGCCCACTCATCAGACATCAG...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTCAGCACCTGTGGGCATaGCAGAGATGTTATCTTACT +
Preference number: 4 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSQHLWA*QRCYLT
Trigger: AGTAAGATAACATCTCTGCCATGCCCACAGGTGCTG...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376716.9
ENST00000598071.6
ENST00000602063.5
CDS-3UTR CCA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTATGACACCCAAGTCTTaGAAACTCCGCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: FTENPATGVCQRKVFLQCMTPKS*KLRLLP
Trigger: AGGAAGGAGGCGGAGTTTCCAAGACTTGGGTGTCAT...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATGACACCCAAGTCTTaGAAACTCCGCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRMTPKS*KLRLLP
Trigger: AGGAAGGAGGCGGAGTTTCCAAGACTTGGGTGTCAT...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCAGGCAACTAGGAATATaGCTCAAGCTATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ENPATGVCQRKVFLQCELRQLGI*LKLSCS
Trigger: GGAACAGGATAGCTTGAGCCATATTCCTAGTTGCCT...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTGAGGCTTTCCCAAAATaGCTACCTGTGAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSEAFPK*LPVNSP
Trigger: AGGAGAATTCACAGGTAGTCATTTTGGGAAAGCCTC...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GAACACAGGGACATCAAGACAGGAACAATAGACACTGGGGACTCCAAGAGGAAGCCTAAATTTGGGAAATaGCTGCTAACTTGGACGTTC +
Preference number: 4 (lower is better)
Translates to: EHRDIKTGTIDTGDSKRKPKFGK*LLTWTF
Trigger: GAACGTCCAAGTTAGCAGTCATTTCCCAAATTTAGG...CTTCCTCTTGGAGTCCCCAGTGTCTATTGTTCCTGTCTTGATGTCCCTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597747.5
CDS-3UTR TCA 90 bp GGAACACAGGGACATCAAGACAGGAACAATAGACACTGGGGACTCCAAGAGGAACAGGCAATATATCCATaGGACAAACCTGCATATGCA +
Preference number: 4 (lower is better)
Translates to: GTQGHQDRNNRHWGLQEEQAIYP*DKPAYA
Trigger: TGCATATGCAGGTTTGTCTCATGGATATATTGCCTG...TTCCTCTTGGAGTCCCCAGTGTCTATTGTTCCTGTCTTGATGTCCCTGTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597747.5
CDS-3UTR TCA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCCAGGCAATATATCCATaGGACAAACCTGCATATGCA +
Preference number: 4 (lower is better)
Translates to: ENPATGVCQRKVFLQCELQAIYP*DKPAYA
Trigger: TGCATATGCAGGTTTGTCTCATGGATATATTGCCTG...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR GCA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACCTGCCACAGGGGTTTaGCAGAGGAAAGTATTTCTC +
Preference number: 4 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPPATGV*QRKVFL
Trigger: GAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGG...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR GCA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGCCTGCCACAGGGGTTTaGCAGAGGAAAGTATTTCTC +
Preference number: 4 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMPATGV*QRKVFL
Trigger: GAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGG...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR GCA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTGAAAAGATTTCTGATTaGCAAGGGTTAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSEKISD*QGLGLR
Trigger: CCTCAGCCCTAACCCTTGGCAATCAGAAATCTTTTC...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCTTCCCAGAACTTGGTaGGCTCCGGCCTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: SAFMKLLFFADILRAYIWLPRTW*APASSL
Trigger: GAGAGATGAGGCCGGAGCCCACCAAGTTCTGGGAAG...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000598071.6
CDS-3UTR CCA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGCTGATGTCTGATGAGTaGGCTCTTCAAAGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMLMSDE*ALQSEA
Trigger: GGCTTCGCTTTGAAGAGCCCACTCATCAGACATCAG...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCTGATGTCTGATGAGTaGGCTCTTCAAAGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHILMSDE*ALQSEA
Trigger: GGCTTCGCTTTGAAGAGCCCACTCATCAGACATCAG...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTTTAAGGGCCTACATCTaGCAAGAGGCTTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSLRAYI*QEAFPK
Trigger: TTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAA...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTTGTTCTCAGCACCTGTaGGCATGGCAGAGATGTTAT +
Preference number: 4 (lower is better)
Translates to: FTENPATGVCQRKVFLQCCSQHL*AWQRCY
Trigger: ATAACATCTCTGCCATGCCCACAGGTGCTGAGAACA...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376716.9
ENST00000598071.6
ENST00000602063.5
CDS-3UTR CCA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCAATGACACCCAAGTCTTaGAAACTCCGCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPMTPKS*KLRLLP
Trigger: AGGAAGGAGGCGGAGTTTCCAAGACTTGGGTGTCAT...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTAGTGTTAGGGATTCCTaGGCCTGCATCATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHISVRDS*ACIIVS
Trigger: GGAGACAATGATGCAGGCCCAGGAATCCCTAACACT...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGTGGGTTCCCAGAACTTaGTGGGCTCCGGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: SAFMKLLFFADILRAYIWWVPRT*WAPASS
Trigger: AGATGAGGCCGGAGCCCACCAAGTTCTGGGAACCCA...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594083.5
ENST00000599177.5
CDS-3UTR TCA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCGCATTCTCTATGTTGTaGGTTCTCTGTTGCTTAATG +
Preference number: 4 (lower is better)
Translates to: ENPATGVCQRKVFLQCELAFSML*VLCCLM
Trigger: CATTAAGCAACAGAGAACTCACAACATAGAGAATGC...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCATGAACATTGAGCCCTaGTTTTGTAGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ENPATGVCQRKVFLQCELMNIEP*FCSEGF
Trigger: AAAGCCTTCACTACAAAATCAGGGCTCAATGTTCAT...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR GCA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATGAGTTCGATGATGTaGAGTAAGACGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRMSSMM*SKTPLL
Trigger: GAGAAGAGGCGTCTTACTGCACATCATCGAACTCAT...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR GCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCCCTGCCACAGGGGTTTaGCAGAGGAAAGTATTTCTC +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGPATGV*QRKVFL
Trigger: GAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGG...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR GCA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAAAAGATTTCTGATTaGCAAGGGTTAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FTENPATGVCQRKVFLQCEKISD*QGLGLR
Trigger: CCTCAGCCCTAACCCTTGGCAATCAGAAATCTTTTC...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACTTCCCAGAACTTGGTaGGCTCCGGCCTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLLPRTW*APASSL
Trigger: GAGAGATGAGGCCGGAGCCCACCAAGTTCTGGGAAG...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000598071.6
CDS-3UTR CCA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTGAACTTCCCAGAACTTaGTGGGCTCCGGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFELPRT*WAPASS
Trigger: AGATGAGGCCGGAGCCCACCAAGTTCTGGGAAGTTC...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376716.9
ENST00000598071.6
CDS-3UTR CCA 90 bp AGGGTTGAAGAACCACCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTATGACACCCAAGTCTTaGAAACTCCGCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RVEEPPIWYYVHYLGDRIMTPKS*KLRLLP
Trigger: AGGAAGGAGGCGGAGTTTCCAAGACTTGGGTGTCAT...AATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGGTGGTTCTTCAACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597747.5
CDS-3UTR CCA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTAGGCAACTAGGAATATaGCTCAAGCTATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FTENPATGVCQRKVFLQCRQLGI*LKLSCS
Trigger: GGAACAGGATAGCTTGAGCCATATTCCTAGTTGCCT...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTGCATTCTCTATGTTGTaGGTTCTCTGTTGCTTAATG +
Preference number: 4 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSAFSML*VLCCLM
Trigger: CATTAAGCAACAGAGAACTCACAACATAGAGAATGC...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCGGTCACTCTTCATGGTaGAACCTTTTCGACATTCGG +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGGHSSW*NLFDIR
Trigger: CCGAATGTCGAAAAGGTTTCACCATGAAGAGTGACC...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCGATGTACATTGAGATaGCTCTTCTCAGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHIRCTLR*LFSVKP
Trigger: AGGCTTCACTGAGAAGAGTCATCTCAATGTACATCG...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACGATGTACATTGAGATaGCTCTTCTCAGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPRCTLR*LFSVKP
Trigger: AGGCTTCACTGAGAAGAGTCATCTCAATGTACATCG...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTGGCATGTCTTCTTCCTaGAGGTTTTATCACATTCAT +
Preference number: 4 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSGMSSS*RFYHIH
Trigger: ATGAATGTGATAAAACCTTCAGGAAGAAGACATGCC...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTATGAACATTGAGCCCTaGTTTTGTAGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSMNIEP*FCSEGF
Trigger: AAAGCCTTCACTACAAAATCAGGGCTCAATGTTCAT...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGGAGGCTTTCCCAAAATaGCTACCTGTGAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMEAFPK*LPVNSP
Trigger: AGGAGAATTCACAGGTAGTCATTTTGGGAAAGCCTC...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CACAGGGACATCAAGACAGGAACAATAGACACTGGGGACTCCAAGAGGAAGAAGTGTATTTGTCTCTTCTaGATCAGCTCTAAATTTCGG +
Preference number: 4 (lower is better)
Translates to: HRDIKTGTIDTGDSKRKKCICLF*ISSKFR
Trigger: CCGAAATTTAGAGCTGATTCAGAAGAGACAAATACA...CTTCTTCCTCTTGGAGTCCCCAGTGTCTATTGTTCCTGTCTTGATGTCCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597747.5
CDS-3UTR TCA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGCGATTACGGTGGTGGTaGCATGAATCAATATATGTG +
Preference number: 4 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRRLRWW*HESIYV
Trigger: CACATATATTGATTCATGTCACCACCACCGTAATCG...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTATTGATGCAACATTCTaGATCTCGATTACGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FTENPATGVCQRKVFLQCIDATF*ISITVV
Trigger: CACCACCGTAATCGAGATTCAGAATGTTGCATCAAT...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTGATGCAACATTCTaGATCTCGATTACGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRIDATF*ISITVV
Trigger: CACCACCGTAATCGAGATTCAGAATGTTGCATCAAT...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp AGGGTTGAAGAACCACCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTGAGGAAGGCAAGGGTTaGAGAACCACCTATTTGGTA +
Preference number: 4 (lower is better)
Translates to: RVEEPPIWYYVHYLGDRIEEGKG*RTTYLV
Trigger: TACCAAATAGGTGGTTCTTCAACCCTTGCCTTCCTC...AATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGGTGGTTCTTCAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597747.5
CDS-3UTR GCA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCAATGAGTTCGATGATGTaGAGTAAGACGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPMSSMM*SKTPLL
Trigger: GAGAAGAGGCGTCTTACTGCACATCATCGAACTCAT...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR GCA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCCCTGCCACAGGGGTTTaGCAGAGGAAAGTATTTCTC +
Preference number: 4 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFPATGV*QRKVFL
Trigger: GAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGG...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR GCA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGGAAAAGATTTCTGATTaGCAAGGGTTAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMEKISD*QGLGLR
Trigger: CCTCAGCCCTAACCCTTGGCAATCAGAAATCTTTTC...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp ACTTTGATTTTGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTGATTTCTATCTTCCCAGAACTTGGTaGGCTCCGGCCTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: TLILQVMLQRIINFPDFYLPRTW*APASSL
Trigger: GAGAGATGAGGCCGGAGCCCACCAAGTTCTGGGAAG...ATAGAAATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599115.5
CDS-3UTR CCA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCAACATATTCTGTTCATaGCACTGTTTCACACTCTTC +
Preference number: 4 (lower is better)
Translates to: ENPATGVCQRKVFLQCELNIFCS*HCFTLF
Trigger: GAAGAGTGTGAAACAGTGCCATGAACAGAATATGTT...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTGATGGTCCATTAGTCTaGATTTTCTGGAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSDGPLV*IFWRKL
Trigger: AAGCTTTCTCCAGAAAATCCAGACTAATGGACCATC...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGTTAAGGGCCTACATCTaGCAAGAGGCTTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMLRAYI*QEAFPK
Trigger: TTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAA...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTTTAAGGGCCTACATCTaGCAAGAGGCTTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHILRAYI*QEAFPK
Trigger: TTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAA...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTGTTCTCAGCACCTGTaGGCATGGCAGAGATGTTAT +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGCSQHL*AWQRCY
Trigger: ATAACATCTCTGCCATGCCCACAGGTGCTGAGAACA...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376716.9
ENST00000598071.6
ENST00000602063.5
CDS-3UTR CCA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCAGTGTTAGGGATTCCTaGGCCTGCATCATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFSVRDS*ACIIVS
Trigger: GGAGACAATGATGCAGGCCCAGGAATCCCTAACACT...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTAGGCAACTAGGAATATaGCTCAAGCTATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHIRQLGI*LKLSCS
Trigger: GGAACAGGATAGCTTGAGCCATATTCCTAGTTGCCT...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTATCTTTGGAAGAAGCTaGGTTAAGGGCAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: FTENPATGVCQRKVFLQCIFGRS*VKGKNS
Trigger: AGAGTTCTTGCCCTTAACCCAGCTTCTTCCAAAGAT...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCGAGGCTTTCCCAAAATaGCTACCTGTGAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGEAFPK*LPVNSP
Trigger: AGGAGAATTCACAGGTAGTCATTTTGGGAAAGCCTC...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTTGTATTTGTCTCTTCTaGATCAGCTCTAAATTTCGG +
Preference number: 4 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSCICLF*ISSKFR
Trigger: CCGAAATTTAGAGCTGATTCAGAAGAGACAAATACA...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACCTAAATTTGGGAAATaGCTGCTAACTTGGACGTTC +
Preference number: 4 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPPKFGK*LLTWTF
Trigger: GAACGTCCAAGTTAGCAGTCATTTCCCAAATTTAGG...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGCCTAAATTTGGGAAATaGCTGCTAACTTGGACGTTC +
Preference number: 4 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMPKFGK*LLTWTF
Trigger: GAACGTCCAAGTTAGCAGTCATTTCCCAAATTTAGG...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCCTAAATTTGGGAAATaGCTGCTAACTTGGACGTTC +
Preference number: 4 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHIPKFGK*LLTWTF
Trigger: GAACGTCCAAGTTAGCAGTCATTTCCCAAATTTAGG...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTACGGTGGTGGTGACATaGATCAATATATGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: FTENPATGVCQRKVFLQCTVVVT*INICVK
Trigger: CTTAACACATATATTGATTCATGTCACCACCACCGT...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGCGATTACGGTGGTGGTaGCATGAATCAATATATGTG +
Preference number: 4 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMRLRWW*HESIYV
Trigger: CACATATATTGATTCATGTCACCACCACCGTAATCG...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACGATTACGGTGGTGGTaGCATGAATCAATATATGTG +
Preference number: 4 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPRLRWW*HESIYV
Trigger: CACATATATTGATTCATGTCACCACCACCGTAATCG...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR GCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCGAAAAGATTTCTGATTaGCAAGGGTTAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGEKISD*QGLGLR
Trigger: CCTCAGCCCTAACCCTTGGCAATCAGAAATCTTTTC...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGCTGATGTCTGATGAGTaGGCTCTTCAAAGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLLMSDE*ALQSEA
Trigger: GGCTTCGCTTTGAAGAGCCCACTCATCAGACATCAG...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCTGTTCTCAGCACCTGTaGGCATGGCAGAGATGTTAT +
Preference number: 4 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFCSQHL*AWQRCY
Trigger: ATAACATCTCTGCCATGCCCACAGGTGCTGAGAACA...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376716.9
ENST00000598071.6
ENST00000602063.5
CDS-3UTR CCA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTATGACACCCAAGTCTTaGAAACTCCGCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFMTPKS*KLRLLP
Trigger: AGGAAGGAGGCGGAGTTTCCAAGACTTGGGTGTCAT...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGAGTGTTAGGGATTCCTaGGCCTGCATCATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SAFMKLLFFADILRAYIWSVRDS*ACIIVS
Trigger: GGAGACAATGATGCAGGCCCAGGAATCCCTAACACT...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp GCACTGTTTCACACTCTTCTGAATACTTTGATTTTGCAAGTGATGCTGCAGAGGAGGCAACTAGGAATATaGCTCAAGCTATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ALFHTLLNTLILQVMLQRRQLGI*LKLSCS
Trigger: GGAACAGGATAGCTTGAGCCATATTCCTAGTTGCCT...CCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CCA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCATATGCAGAACAACTTaGATGGATTTCAGGTTAATC +
Preference number: 4 (lower is better)
Translates to: ENPATGVCQRKVFLQCELICRTT*MDFRLI
Trigger: GATTAACCTGAAATCCATCCAAGTTGTTCTGCATAT...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCACTAATGTCCTTCAGTaGGTGAATAAACAAATAGTG +
Preference number: 4 (lower is better)
Translates to: ENPATGVCQRKVFLQCELTNVLQ*VNKQIV
Trigger: CACTATTTGTTTATTCACCCACTGAAGGACATTAGT...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp GAAGAACCACCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTGAGCTTAGGAACAATAGACACTaGGGACTCCAAGAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: EEPPIWYYVHYLGDRIELRNNRH*GLQEEE
Trigger: TTCTTCCTCTTGGAGTCCCCAGTGTCTATTGTTCCT...AAGCTCAATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGGTGGTTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597747.5
CDS-3UTR CCA 90 bp GTTGAAGAACCACCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTGAGGCAAGAGCTAAACATTaGGAACACAGGGACATCAAG +
Preference number: 4 (lower is better)
Translates to: VEEPPIWYYVHYLGDRIEARAKH*EHRDIK
Trigger: CTTGATGTCCCTGTGTTCCCAATGTTTAGCTCTTGC...CTCAATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGGTGGTTCTTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597747.5
CDS-3UTR TCA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTGCATTCTCTATGTTGTaGGTTCTCTGTTGCTTAATG +
Preference number: 4 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHIAFSML*VLCCLM
Trigger: CATTAAGCAACAGAGAACTCACAACATAGAGAATGC...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCATTCGTTGATGTACCATaGGACAGTGCTTCATTGAAA +
Preference number: 4 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPFVDVP*DSASLK
Trigger: TTTCAATGAAGCACTGTCTCATGGTACATCAACGAA...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTTTCGTTGATGTACCATaGGACAGTGCTTCATTGAAA +
Preference number: 4 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHIFVDVP*DSASLK
Trigger: TTTCAATGAAGCACTGTCTCATGGTACATCAACGAA...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGGTCACTCTTCATGGTaGAACCTTTTCGACATTCGG +
Preference number: 4 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLGHSSW*NLFDIR
Trigger: CCGAATGTCGAAAAGGTTTCACCATGAAGAGTGACC...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTGGTCACTCTTCATGGTaGAACCTTTTCGACATTCGG +
Preference number: 4 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFGHSSW*NLFDIR
Trigger: CCGAATGTCGAAAAGGTTTCACCATGAAGAGTGACC...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCAGGCATGTCTTCTTCCTaGAGGTTTTATCACATTCAT +
Preference number: 4 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPGMSSS*RFYHIH
Trigger: ATGAATGTGATAAAACCTTCAGGAAGAAGACATGCC...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTATGAACATTGAGCCCTaGTTTTGTAGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHIMNIEP*FCSEGF
Trigger: AAAGCCTTCACTACAAAATCAGGGCTCAATGTTCAT...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGATGAACATTGAGCCCTaGTTTTGTAGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMMNIEP*FCSEGF
Trigger: AAAGCCTTCACTACAAAATCAGGGCTCAATGTTCAT...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGTTTATTCATGATCTATaGTCACTTCTGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRFIHDL*SLLRGF
Trigger: AAACCCCCTCAGAAGTGATCATAGATCATGAATAAA...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGTGTATTTGTCTCTTCTaGATCAGCTCTAAATTTCGG +
Preference number: 4 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRCICLF*ISSKFR
Trigger: CCGAAATTTAGAGCTGATTCAGAAGAGACAAATACA...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCAACGGTGGTGGTGACATaGATCAATATATGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPTVVVT*INICVK
Trigger: CTTAACACATATATTGATTCATGTCACCACCACCGT...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCAGATCATCAATTTTCCTaGTTTCTGCATATGCACCTC +
Preference number: 4 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPDHQFS*FLHMHL
Trigger: GAGGTGCATATGCAGAAATCAGGAAAATTGATGATC...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594083.5
ENST00000598071.6
CDS-3UTR TCA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGGATCATCAATTTTCCTaGTTTCTGCATATGCACCTC +
Preference number: 4 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMDHQFS*FLHMHL
Trigger: GAGGTGCATATGCAGAAATCAGGAAAATTGATGATC...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594083.5
ENST00000598071.6
CDS-3UTR GCA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCGAAAAGATTTCTGATTaGCAAGGGTTAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFEKISD*QGLGLR
Trigger: CCTCAGCCCTAACCCTTGGCAATCAGAAATCTTTTC...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGAACATATTCTGTTCATaGCACTGTTTCACACTCTTC +
Preference number: 4 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRNIFCS*HCFTLF
Trigger: GAAGAGTGTGAAACAGTGCCATGAACAGAATATGTT...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGGATGGTCCATTAGTCTaGATTTTCTGGAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMDGPLV*IFWRKL
Trigger: AAGCTTTCTCCAGAAAATCCAGACTAATGGACCATC...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TTGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTGATTTCTATTTGGTACTACTGATGTCTGATGAGTaGGCTCTTCAAAGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: LQVMLQRIINFPDFYLVLLMSDE*ALQSEA
Trigger: GGCTTCGCTTTGAAGAGCCCACTCATCAGACATCAG...TAGTACCAAATAGAAATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CCA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTAAGTGTTAGGGATTCCTaGGCCTGCATCATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLSVRDS*ACIIVS
Trigger: GGAGACAATGATGCAGGCCCAGGAATCCCTAACACT...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCATCTTTGGAAGAAGCTaGGTTAAGGGCAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGIFGRS*VKGKNS
Trigger: AGAGTTCTTGCCCTTAACCCAGCTTCTTCCAAAGAT...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCAGATCATCAATTTTCCTaGTTTCAGAACAGATTCGAG +
Preference number: 4 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPDHQFS*FQNRFE
Trigger: CTCGAATCTGTTCTGAAATCAGGAAAATTGATGATC...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000602063.5
CDS-3UTR TCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCGCATTCTCTATGTTGTaGGTTCTCTGTTGCTTAATG +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGAFSML*VLCCLM
Trigger: CATTAAGCAACAGAGAACTCACAACATAGAGAATGC...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTCGTTGATGTACCATaGGACAGTGCTTCATTGAAA +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGFVDVP*DSASLK
Trigger: TTTCAATGAAGCACTGTCTCATGGTACATCAACGAA...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTAGGTCACTCTTCATGGTaGAACCTTTTCGACATTCGG +
Preference number: 4 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLGHSSW*NLFDIR
Trigger: CCGAATGTCGAAAAGGTTTCACCATGAAGAGTGACC...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCGATGTACATTGAGATaGCTCTTCTCAGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SAFMKLLFFADILRAYIWRCTLR*LFSVKP
Trigger: AGGCTTCACTGAGAAGAGTCATCTCAATGTACATCG...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCAAAATGACTACCTGTaGATTCTCCTGTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHIQNDYL*ILLCLT
Trigger: TGTTAAACACAGGAGAATTCACAGGTAGTCATTTTG...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGGAGGCTTTCCCAAAATaGCTACCTGTGAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: SAFMKLLFFADILRAYIWEAFPK*LPVNSP
Trigger: AGGAGAATTCACAGGTAGTCATTTTGGGAAAGCCTC...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CTGATTTCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTGAGCTTCTAGAGGCTTTCCCAAAATaGCTACCTGTGAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: LISIWYYVHYLGDRIELLEAFPK*LPVNSP
Trigger: AGGAGAATTCACAGGTAGTCATTTTGGGAAAGCCTC...TAGAAGCTCAATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGAAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR TCA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCATTTATTCATGATCTATaGTCACTTCTGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPFIHDL*SLLRGF
Trigger: AAACCCCCTCAGAAGTGATCATAGATCATGAATAAA...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCCCTAAATTTGGGAAATaGCTGCTAACTTGGACGTTC +
Preference number: 4 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFPKFGK*LLTWTF
Trigger: GAACGTCCAAGTTAGCAGTCATTTCCCAAATTTAGG...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCCGATTACGGTGGTGGTaGCATGAATCAATATATGTG +
Preference number: 4 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFRLRWW*HESIYV
Trigger: CACATATATTGATTCATGTCACCACCACCGTAATCG...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCATTGATGCAACATTCTaGATCTCGATTACGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFIDATF*ISITVV
Trigger: CACCACCGTAATCGAGATTCAGAATGTTGCATCAAT...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR GCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGATGAGTTCGATGATGTaGAGTAAGACGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLMSSMM*SKTPLL
Trigger: GAGAAGAGGCGTCTTACTGCACATCATCGAACTCAT...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGTTAAGGGCCTACATCTaGCAAGAGGCTTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLLRAYI*QEAFPK
Trigger: TTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAA...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTTTAAGGGCCTACATCTaGCAAGAGGCTTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFLRAYI*QEAFPK
Trigger: TTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAA...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGTTAAGGGCCTACATCTaGCAAGAGGCTTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SAFMKLLFFADILRAYIWLRAYI*QEAFPK
Trigger: TTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAA...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGAGGCAACTAGGAATATaGCTCAAGCTATCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SAFMKLLFFADILRAYIWRQLGI*LKLSCS
Trigger: GGAACAGGATAGCTTGAGCCATATTCCTAGTTGCCT...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCATCTTTGGAAGAAGCTaGGTTAAGGGCAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFIFGRS*VKGKNS
Trigger: AGAGTTCTTGCCCTTAACCCAGCTTCTTCCAAAGAT...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACGATGTACATTGAGATaGCTCTTCTCAGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLRCTLR*LFSVKP
Trigger: AGGCTTCACTGAGAAGAGTCATCTCAATGTACATCG...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCCAAAATGACTACCTGTaGATTCTCCTGTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGQNDYL*ILLCLT
Trigger: TGTTAAACACAGGAGAATTCACAGGTAGTCATTTTG...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTAGAGGCTTTCCCAAAATaGCTACCTGTGAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLEAFPK*LPVNSP
Trigger: AGGAGAATTCACAGGTAGTCATTTTGGGAAAGCCTC...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTGTATTTGTCTCTTCTaGATCAGCTCTAAATTTCGG +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGCICLF*ISSKFR
Trigger: CCGAAATTTAGAGCTGATTCAGAAGAGACAAATACA...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCACGGTGGTGGTGACATaGATCAATATATGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFTVVVT*INICVK
Trigger: CTTAACACATATATTGATTCATGTCACCACCACCGT...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGATTGATGCAACATTCTaGATCTCGATTACGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SAFMKLLFFADILRAYIWIDATF*ISITVV
Trigger: CACCACCGTAATCGAGATTCAGAATGTTGCATCAAT...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp TTCCTGATTTCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTGAGCTTCAGGCAATATATCCATaGGACAAACCTGCATATGCA +
Preference number: 4 (lower is better)
Translates to: FLISIWYYVHYLGDRIELQAIYP*DKPAYA
Trigger: TGCATATGCAGGTTTGTCTCATGGATATATTGCCTG...AAGCTCAATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGAAATCAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599115.5
ENST00000599177.5
CDS-3UTR GCA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTAATGAGTTCGATGATGTaGAGTAAGACGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLMSSMM*SKTPLL
Trigger: GAGAAGAGGCGTCTTACTGCACATCATCGAACTCAT...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCAACATATTCTGTTCATaGCACTGTTTCACACTCTTC +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGNIFCS*HCFTLF
Trigger: GAAGAGTGTGAAACAGTGCCATGAACAGAATATGTT...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGATCTTTGGAAGAAGCTaGGTTAAGGGCAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: SAFMKLLFFADILRAYIWIFGRS*VKGKNS
Trigger: AGAGTTCTTGCCCTTAACCCAGCTTCTTCCAAAGAT...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTACTAATGTCCTTCAGTaGGTGAATAAACAAATAGTG +
Preference number: 4 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHITNVLQ*VNKQIV
Trigger: CACTATTTGTTTATTCACCCACTGAAGGACATTAGT...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGACTAATGTCCTTCAGTaGGTGAATAAACAAATAGTG +
Preference number: 4 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMTNVLQ*VNKQIV
Trigger: CACTATTTGTTTATTCACCCACTGAAGGACATTAGT...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTGCATTCTCTATGTTGTaGGTTCTCTGTTGCTTAATG +
Preference number: 4 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFAFSML*VLCCLM
Trigger: CATTAAGCAACAGAGAACTCACAACATAGAGAATGC...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CACACTCTTCTGAATACTTTGATTTTGCAAGTGATGCTGCAGAGGATCATCAATGCATTCTCTATGTTGTaGGTTCTCTGTTGCTTAATG +
Preference number: 4 (lower is better)
Translates to: HTLLNTLILQVMLQRIINAFSML*VLCCLM
Trigger: CATTAAGCAACAGAGAACTCACAACATAGAGAATGC...ATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR TCA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTTTCGTTGATGTACCATaGGACAGTGCTTCATTGAAA +
Preference number: 4 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFFVDVP*DSASLK
Trigger: TTTCAATGAAGCACTGTCTCATGGTACATCAACGAA...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp TCAATTTTCCTGATTTCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTCGATGTACATTGAGATaGCTCTTCTCAGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SIFLISIWYYVHYLGDRIRCTLR*LFSVKP
Trigger: AGGCTTCACTGAGAAGAGTCATCTCAATGTACATCG...AATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGAAATCAGGAAAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR TCA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGGGCATGTCTTCTTCCTaGAGGTTTTATCACATTCAT +
Preference number: 4 (lower is better)
Translates to: SAFMKLLFFADILRAYIWGMSSS*RFYHIH
Trigger: ATGAATGTGATAAAACCTTCAGGAAGAAGACATGCC...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTGGCATGTCTTCTTCCTaGAGGTTTTATCACATTCAT +
Preference number: 4 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFGMSSS*RFYHIH
Trigger: ATGAATGTGATAAAACCTTCAGGAAGAAGACATGCC...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGGCATGTCTTCTTCCTaGAGGTTTTATCACATTCAT +
Preference number: 4 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLGMSSS*RFYHIH
Trigger: ATGAATGTGATAAAACCTTCAGGAAGAAGACATGCC...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGATGAACATTGAGCCCTaGTTTTGTAGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLMNIEP*FCSEGF
Trigger: AAAGCCTTCACTACAAAATCAGGGCTCAATGTTCAT...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCCAAAATGACTACCTGTaGATTCTCCTGTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFQNDYL*ILLCLT
Trigger: TGTTAAACACAGGAGAATTCACAGGTAGTCATTTTG...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCTTTATTCATGATCTATaGTCACTTCTGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFFIHDL*SLLRGF
Trigger: AAACCCCCTCAGAAGTGATCATAGATCATGAATAAA...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGACGGTGGTGGTGACATaGATCAATATATGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLTVVVT*INICVK
Trigger: CTTAACACATATATTGATTCATGTCACCACCACCGT...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR GCA 90 bp TTGATTTTGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTGATTTCTATTTGATGAGTTCGATGATGTaGAGTAAGACGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LILQVMLQRIINFPDFYLMSSMM*SKTPLL
Trigger: GAGAAGAGGCGTCTTACTGCACATCATCGAACTCAT...CAAATAGAAATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CCA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCAACATATTCTGTTCATaGCACTGTTTCACACTCTTC +
Preference number: 4 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFNIFCS*HCFTLF
Trigger: GAAGAGTGTGAAACAGTGCCATGAACAGAATATGTT...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGGATGGTCCATTAGTCTaGATTTTCTGGAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SAFMKLLFFADILRAYIWDGPLV*IFWRKL
Trigger: AAGCTTTCTCCAGAAAATCCAGACTAATGGACCATC...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGATGGTCCATTAGTCTaGATTTTCTGGAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLDGPLV*IFWRKL
Trigger: AAGCTTTCTCCAGAAAATCCAGACTAATGGACCATC...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp ATTTTCCTGATTTCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTGAGATCTTTGGAAGAAGCTaGGTTAAGGGCAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: IFLISIWYYVHYLGDRIEIFGRS*VKGKNS
Trigger: AGAGTTCTTGCCCTTAACCCAGCTTCTTCCAAAGAT...CTCAATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGAAATCAGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CCA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCACTAATGTCCTTCAGTaGGTGAATAAACAAATAGTG +
Preference number: 4 (lower is better)
Translates to: HEITLLCRYLKGLHLARGTNVLQ*VNKQIV
Trigger: CACTATTTGTTTATTCACCCACTGAAGGACATTAGT...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CCA 90 bp GCACTGTTTCACACTCTTCTGAATACTTTGATTTTGCAAGTGATGCTGCAGAGGACTAATGTCCTTCAGTaGGTGAATAAACAAATAGTG +
Preference number: 4 (lower is better)
Translates to: ALFHTLLNTLILQVMLQRTNVLQ*VNKQIV
Trigger: CACTATTTGTTTATTCACCCACTGAAGGACATTAGT...CCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
3UTR CAA 72 bp ATGGCACTGTTTCACACTCTTCTGAATACTTTGATTTaGCAAGTGATGCTGCAGAGGATCATCAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: MALFHTLLNTLI*QVMLQRIINFP
Trigger: AGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599115.5
ENST00000599177.5
CDS-3UTR TCA 90 bp CTGAATACTTTGATTTTGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTGATTTCGTTGATGTACCATaGGACAGTGCTTCATTGAAA +
Preference number: 4 (lower is better)
Translates to: LNTLILQVMLQRIINFPDFVDVP*DSASLK
Trigger: TTTCAATGAAGCACTGTCTCATGGTACATCAACGAA...ATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR TCA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTCAAAATGACTACCTGTaGATTCTCCTGTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFQNDYL*ILLCLT
Trigger: TGTTAAACACAGGAGAATTCACAGGTAGTCATTTTG...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp CTGATTTCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTGAGCTTCTACAAAATGACTACCTGTaGATTCTCCTGTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: LISIWYYVHYLGDRIELLQNDYL*ILLCLT
Trigger: TGTTAAACACAGGAGAATTCACAGGTAGTCATTTTG...TAGAAGCTCAATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGAAATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR TCA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGTGTATTTGTCTCTTCTaGATCAGCTCTAAATTTCGG +
Preference number: 4 (lower is better)
Translates to: SAFMKLLFFADILRAYIWCICLF*ISSKFR
Trigger: CCGAAATTTAGAGCTGATTCAGAAGAGACAAATACA...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp GTTCATGGCACTGTTTCACACTCTTCTGAATACTTTGATTTTGCAAGTGATGCTTGTATTTGTCTCTTCTaGATCAGCTCTAAATTTCGG +
Preference number: 4 (lower is better)
Translates to: VHGTVSHSSEYFDFASDACICLF*ISSKFR
Trigger: CCGAAATTTAGAGCTGATTCAGAAGAGACAAATACA...AGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR TCA 90 bp TCAATTTTCCTGATTTCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTCCTAAATTTGGGAAATaGCTGCTAACTTGGACGTTC +
Preference number: 4 (lower is better)
Translates to: SIFLISIWYYVHYLGDRIPKFGK*LLTWTF
Trigger: GAACGTCCAAGTTAGCAGTCATTTCCCAAATTTAGG...AATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGAAATCAGGAAAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CCA 90 bp CACACTCTTCTGAATACTTTGATTTTGCAAGTGATGCTGCAGAGGATCATCAATAACATATTCTGTTCATaGCACTGTTTCACACTCTTC +
Preference number: 4 (lower is better)
Translates to: HTLLNTLILQVMLQRIINNIFCS*HCFTLF
Trigger: GAAGAGTGTGAAACAGTGCCATGAACAGAATATGTT...ATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599115.5
ENST00000599177.5
CDS-3UTR TCA 90 bp TCAATTTTCCTGATTTCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTACGGTGGTGGTGACATaGATCAATATATGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: SIFLISIWYYVHYLGDRITVVVT*INICVK
Trigger: CTTAACACATATATTGATTCATGTCACCACCACCGT...AATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGAAATCAGGAAAATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CCA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGATATGCAGAACAACTTaGATGGATTTCAGGTTAATC +
Preference number: 4 (lower is better)
Translates to: SAFMKLLFFADILRAYIWICRTT*MDFRLI
Trigger: GATTAACCTGAAATCCATCCAAGTTGTTCTGCATAT...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR TCA 90 bp TTGATTTTGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTGATTTCTATTTGTTTATTCATGATCTATaGTCACTTCTGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: LILQVMLQRIINFPDFYLFIHDL*SLLRGF
Trigger: AAACCCCCTCAGAAGTGATCATAGATCATGAATAAA...CAAATAGAAATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CCA 90 bp TCAATTTTCCTGATTTCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTAACATATTCTGTTCATaGCACTGTTTCACACTCTTC +
Preference number: 4 (lower is better)
Translates to: SIFLISIWYYVHYLGDRINIFCS*HCFTLF
Trigger: GAAGAGTGTGAAACAGTGCCATGAACAGAATATGTT...AATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGAAATCAGGAAAATTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599115.5
ENST00000599177.5
CDS-3UTR CCA 90 bp ATTTTCCTGATTTCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTGAGATATGCAGAACAACTTaGATGGATTTCAGGTTAATC +
Preference number: 4 (lower is better)
Translates to: IFLISIWYYVHYLGDRIEICRTT*MDFRLI
Trigger: GATTAACCTGAAATCCATCCAAGTTGTTCTGCATAT...CTCAATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGAAATCAGGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
3UTR CAA 72 bp TTTCCTGTATTTGGTAATGAACTATGCTTATGTAAGTaGTTATCTTTGGAAGAAGCTGGGTTAAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: FPVFGNELCLCK*LSLEEAGLRAR
Trigger: TCTTGCCCTTAACCCAGCTTCTTCCAAAGATAACAACTTACATAAGCATAGTTCATTACCAAATACAGGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS CCA 90 bp TGCGATAGGAATCGGACCCACGCTAAGCTCCTGAAAGAATTCCACTaGCGTCGCCAAACGCTGGCGCCGACAGATACCAGTCCATCACCA +
Preference number: 5 (lower is better)
Translates to: CDRNRTHAKLLKEFH*RRQTLAPTDTSPSP
Trigger: TGGTGATGGACTGGTATCTGTCGGCGCCAGCGTTTGGCGACGCCAGTGGAATTCTTTCAGGAGCTTAGCGTGGGTCCGATTCCTATCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602063.5
CDS TCA 90 bp TCTTGTAGTTCCCCTGCGATAGGAATCGGACCCACGCTAAGCTCCTaGAAGAATTCCACTGGCGTCGCCAAACGCTGGCGCCGACAGATA +
Preference number: 5 (lower is better)
Translates to: SCSSPAIGIGPTLSS*KNSTGVAKRWRRQI
Trigger: TATCTGTCGGCGCCAGCGTTTGGCGACGCCAGTGGAATTCTTTCAGGAGCTTAGCGTGGGTCCGATTCCTATCGCAGGGGAACTACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602063.5
CDS TCA 90 bp TGTGGGTCTGTTGCCCAGGCTGGAGTGAGTAAGACTCCAGTGGCGTaGTCTCTGTTCACTGCAACCTCCATCTCCTGGGTTCAAGCGATT +
Preference number: 5 (lower is better)
Translates to: CGSVAQAGVSKTPVA*SLFTATSISWVQAI
Trigger: AATCGCTTGAACCCAGGAGATGGAGGTTGCAGTGAACAGAGATCACGCCACTGGAGTCTTACTCACTCCAGCCTGGGCAACAGACCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595114.1
ENST00000597905.5
ENST00000599631.5
CDS-3UTR CAA 90 bp CACAGGGACATCAAGACAGGAACAATAGACACTGGGGACTCCAAGAGGAAGAAGGATGACACCCAAGTCTaGGAAACTCCGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: HRDIKTGTIDTGDSKRKKDDTQV*ETPPPS
Trigger: GGAAGGAGGCGGAGTTTCCAAGACTTGGGTGTCATC...CTTCTTCCTCTTGGAGTCCCCAGTGTCTATTGTTCCTGTCTTGATGTCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597747.5
CDS-3UTR CAA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGGATTCTTCCCAGAACTaGGTGGGCTCCGGCCTCATC +
Preference number: 5 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMDSSQN*VGSGLI
Trigger: GATGAGGCCGGAGCCCACCAAGTTCTGGGAAGAATC...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391795.7
CDS-3UTR CAA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTCCCTGCCACAGGGGTTaGCCAGAGGAAAGTATTTCT +
Preference number: 5 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSPCHRG*PEESIS
Trigger: AGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGG...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGATGACACCCAAGTCTaGGAAACTCCGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: FTENPATGVCQRKVFLQCDDTQV*ETPPPS
Trigger: GGAAGGAGGCGGAGTTTCCAAGACTTGGGTGTCATC...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GGAACACAGGGACATCAAGACAGGAACAATAGACACTGGGGACTCCAAGAGGAAGGAGGAAGGCAAGGGTaGAAGAACCACCTATTTGGT +
Preference number: 5 (lower is better)
Translates to: GTQGHQDRNNRHWGLQEEGGRQG*KNHLFG
Trigger: ACCAAATAGGTGGTTCTTCAACCCTTGCCTTCCTCC...TTCCTCTTGGAGTCCCCAGTGTCTATTGTTCCTGTCTTGATGTCCCTGTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597747.5
CDS-3UTR CAA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGATCTGGTTTGCTGGCTaGATACCCCACTGCCACCAG +
Preference number: 5 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMIWFAG*IPHCHQ
Trigger: CTGGTGGCAGTGGGGTATCAAGCCAGCAAACCAGAT...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTCCATTAGCCGGATCTTaGCTGGAAAGCCTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSPLAGS*LESLFH
Trigger: GTGGAAAAGGCTTTCCAGCAAAGATCCGGCTAATGG...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTGATGACACCCAAGTCTaGGAAACTCCGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHIDDTQV*ETPPPS
Trigger: GGAAGGAGGCGGAGTTTCCAAGACTTGGGTGTCATC...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGGTGGGTTCCCAGAACTaGGTGGGCTCCGGCCTCATC +
Preference number: 5 (lower is better)
Translates to: SAFMKLLFFADILRAYIWVGSQN*VGSGLI
Trigger: GATGAGGCCGGAGCCCACCAAGTTCTGGGAACCCAC...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594083.5
ENST00000599177.5
CDS-3UTR CAA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGCCATTAGCCGGATCTTaGCTGGAAAGCCTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRPLAGS*LESLFH
Trigger: GTGGAAAAGGCTTTCCAGCAAAGATCCGGCTAATGG...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACCCTGCCACAGGGGTTaGCCAGAGGAAAGTATTTCT +
Preference number: 5 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPPCHRG*PEESIS
Trigger: AGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGG...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCCCTGCCACAGGGGTTaGCCAGAGGAAAGTATTTCT +
Preference number: 5 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHIPCHRG*PEESIS
Trigger: AGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGG...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCAGAACTTCCCAGAACTaGGTGGGCTCCGGCCTCATC +
Preference number: 5 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFRTSQN*VGSGLI
Trigger: GATGAGGCCGGAGCCCACCAAGTTCTGGGAAGTTCT...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376716.9
ENST00000598071.6
CDS-3UTR CAA 90 bp TGGGAACACAGGGACATCAAGACAGGAACAATAGACACTGGGGACTCCAAGAGGTTGGACGTTCTGTATTaGTCTCTTCTGAATCAGCTC +
Preference number: 5 (lower is better)
Translates to: WEHRDIKTGTIDTGDSKRLDVLY*SLLNQL
Trigger: GAGCTGATTCAGAAGAGACAAATACAGAACGTCCAA...CCTCTTGGAGTCCCCAGTGTCTATTGTTCCTGTCTTGATGTCCCTGTGTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597747.5
CDS-3UTR CAA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCCTCTCATCCATCATTTaGCCAAGGCTTCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ENPATGVCQRKVFLQCELLSSII*PRLLSF
Trigger: GAAGGAAAGAAGCCTTGGCAAAATGATGGATGAGAG...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCCTGAATACTTTGATTTaGCAAGTGATGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: ENPATGVCQRKVFLQCELLNTLI*QVMLQR
Trigger: CCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAG...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACCATTAGCCGGATCTTaGCTGGAAAGCCTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPPLAGS*LESLFH
Trigger: GTGGAAAAGGCTTTCCAGCAAAGATCCGGCTAATGG...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGCCATTAGCCGGATCTTaGCTGGAAAGCCTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMPLAGS*LESLFH
Trigger: GTGGAAAAGGCTTTCCAGCAAAGATCCGGCTAATGG...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGATCTGGTTTGCTGGCTaGATACCCCACTGCCACCAG +
Preference number: 5 (lower is better)
Translates to: SAFMKLLFFADILRAYIWIWFAG*IPHCHQ
Trigger: CTGGTGGCAGTGGGGTATCAAGCCAGCAAACCAGAT...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTCTGAATACTTTGATTTaGCAAGTGATGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSLNTLI*QVMLQR
Trigger: CCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAG...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTAAACGTATCACAATCTaGCTTCAGCAGGAAATGACC +
Preference number: 5 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSKRITI*LQQEMT
Trigger: GGTCATTTCCTGCTGAAGCAAGATTGTGATACGTTT...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCCCCTGCCACAGGGGTTaGCCAGAGGAAAGTATTTCT +
Preference number: 5 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFPCHRG*PEESIS
Trigger: AGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGG...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTAAGAACTTCCCAGAACTaGGTGGGCTCCGGCCTCATC +
Preference number: 5 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLRTSQN*VGSGLI
Trigger: GATGAGGCCGGAGCCCACCAAGTTCTGGGAAGTTCT...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376716.9
ENST00000598071.6
CDS-3UTR CAA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGGATGACACCCAAGTCTaGGAAACTCCGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SAFMKLLFFADILRAYIWDDTQV*ETPPPS
Trigger: GGAAGGAGGCGGAGTTTCCAAGACTTGGGTGTCATC...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTGATGACACCCAAGTCTaGGAAACTCCGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFDDTQV*ETPPPS
Trigger: GGAAGGAGGCGGAGTTTCCAAGACTTGGGTGTCATC...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCGAAATGACTGCTAACTaGGACGTTCTGTATTTGTCT +
Preference number: 5 (lower is better)
Translates to: ENPATGVCQRKVFLQCELEMTAN*DVLYLS
Trigger: AGACAAATACAGAACGTCCAAGTTAGCAGTCATTTC...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGCCTGGGCCTGCATCATaGTCTCCTAAATTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMPGPAS*SPKFGK
Trigger: TTTCCCAAATTTAGGAGACAATGATGCAGGCCCAGG...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCATGAGGGAGTTTGCATaGATGCAACATTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: ENPATGVCQRKVFLQCELMREFA*MQHSES
Trigger: AGATTCAGAATGTTGCATCAATGCAAACTCCCTCAT...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TATTCTGTTCATGGCACTGTTTCACACTCTTCTGAATACTTTGATTTTGCAAGTGATTCTTCCCAGAACTaGGTGGGCTCCGGCCTCATC +
Preference number: 5 (lower is better)
Translates to: YSVHGTVSHSSEYFDFASDSSQN*VGSGLI
Trigger: GATGAGGCCGGAGCCCACCAAGTTCTGGGAAGAATC...ACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCATGAACAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599115.5
CDS-3UTR CAA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTAATCTGGTTTGCTGGCTaGATACCCCACTGCCACCAG +
Preference number: 5 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLIWFAG*IPHCHQ
Trigger: CTGGTGGCAGTGGGGTATCAAGCCAGCAAACCAGAT...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCACTCTTCTGAATACTTaGATTTTGCAAGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: ENPATGVCQRKVFLQCELTLLNT*ILQVML
Trigger: CAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGT...GAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCCCATTAGCCGGATCTTaGCTGGAAAGCCTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFPLAGS*LESLFH
Trigger: GTGGAAAAGGCTTTCCAGCAAAGATCCGGCTAATGG...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTAGATGACACCCAAGTCTaGGAAACTCCGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLDDTQV*ETPPPS
Trigger: GGAAGGAGGCGGAGTTTCCAAGACTTGGGTGTCATC...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGTTGGACGTTCTGTATTaGTCTCTTCTGAATCAGCTC +
Preference number: 5 (lower is better)
Translates to: LRGFIFPPKAFIVCHIHRLDVLY*SLLNQL
Trigger: GAGCTGATTCAGAAGAGACAAATACAGAACGTCCAA...CCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTTTGGACGTTCTGTATTaGTCTCTTCTGAATCAGCTC +
Preference number: 5 (lower is better)
Translates to: FTENPATGVCQRKVFLQCLDVLY*SLLNQL
Trigger: GAGCTGATTCAGAAGAGACAAATACAGAACGTCCAA...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp AGGGTTGAAGAACCACCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTCCTGGGCCTGCATCATaGTCTCCTAAATTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: RVEEPPIWYYVHYLGDRIPGPAS*SPKFGK
Trigger: TTTCCCAAATTTAGGAGACAATGATGCAGGCCCAGG...AATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGGTGGTTCTTCAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597747.5
CDS-3UTR CAA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGCTCTCATCCATCATTTaGCCAAGGCTTCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMLSSII*PRLLSF
Trigger: GAAGGAAAGAAGCCTTGGCAAAATGATGGATGAGAG...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp AAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAACTCTTGTAAGTTGTTATCTTaGGAAGAAGCTGGGTTAAGG +
Preference number: 5 (lower is better)
Translates to: KTLPQGFARGKYFSSVNSCKLLS*EEAGLR
Trigger: CCTTAACCCAGCTTCTTCCAAAGATAACAACTTACA...AGAGTTCACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGCTGAATACTTTGATTTaGCAAGTGATGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMLNTLI*QVMLQR
Trigger: CCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAG...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTAAACGTATCACAATCTaGCTTCAGCAGGAAATGACC +
Preference number: 5 (lower is better)
Translates to: SLLRGFIFPPKAFIVCHIKRITI*LQQEMT
Trigger: GGTCATTTCCTGCTGAAGCAAGATTGTGATACGTTT...AATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGAAACGTATCACAATCTaGCTTCAGCAGGAAATGACC +
Preference number: 5 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMKRITI*LQQEMT
Trigger: GGTCATTTCCTGCTGAAGCAAGATTGTGATACGTTT...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TTCATGGCACTGTTTCACACTCTTCTGAATACTTTGATTTTGCAAGTGATGCTGCCATTAGCCGGATCTTaGCTGGAAAGCCTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: FMALFHTLLNTLILQVMLPLAGS*LESLFH
Trigger: GTGGAAAAGGCTTTCCAGCAAAGATCCGGCTAATGG...CAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CAA 90 bp TCTGTTCATGGCACTGTTTCACACTCTTCTGAATACTTTGATTTTGCAAGTGATCCCTGCCACAGGGGTTaGCCAGAGGAAAGTATTTCT +
Preference number: 5 (lower is better)
Translates to: SVHGTVSHSSEYFDFASDPCHRG*PEESIS
Trigger: AGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGG...ATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCATGAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CAA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGAAATGACTGCTAACTaGGACGTTCTGTATTTGTCT +
Preference number: 5 (lower is better)
Translates to: FTENPATGVCQRKVFLQCEMTAN*DVLYLS
Trigger: AGACAAATACAGAACGTCCAAGTTAGCAGTCATTTC...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCCCTGGGCCTGCATCATaGTCTCCTAAATTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFPGPAS*SPKFGK
Trigger: TTTCCCAAATTTAGGAGACAATGATGCAGGCCCAGG...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCCTCTCATCCATCATTTaGCCAAGGCTTCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: HEITLLCRYLKGLHLARGLSSII*PRLLSF
Trigger: GAAGGAAAGAAGCCTTGGCAAAATGATGGATGAGAG...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GCACTGTTTCACACTCTTCTGAATACTTTGATTTTGCAAGTGATGCTGCAGAGGCTCTCATCCATCATTTaGCCAAGGCTTCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ALFHTLLNTLILQVMLQRLSSII*PRLLSF
Trigger: GAAGGAAAGAAGCCTTGGCAAAATGATGGATGAGAG...CCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CAA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTATGAGGGAGTTTGCATaGATGCAACATTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: FTENPATGVCQRKVFLQCMREFA*MQHSES
Trigger: AGATTCAGAATGTTGCATCAATGCAAACTCCCTCAT...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCAGAGATGTTATCTTACTaGTGTCAGAAAGAACTTCCC +
Preference number: 5 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPEMLSY*CQKELP
Trigger: GGGAAGTTCTTTCTGACACAAGTAAGATAACATCTC...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376716.9
ENST00000598071.6
CDS-3UTR CAA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCCTGGGCCTGCATCATaGTCTCCTAAATTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: SAFMKLLFFADILRAYIWPGPAS*SPKFGK
Trigger: TTTCCCAAATTTAGGAGACAATGATGCAGGCCCAGG...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTCCTGGGCCTGCATCATaGTCTCCTAAATTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFPGPAS*SPKFGK
Trigger: TTTCCCAAATTTAGGAGACAATGATGCAGGCCCAGG...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGATGAGGGAGTTTGCATaGATGCAACATTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMMREFA*MQHSES
Trigger: AGATTCAGAATGTTGCATCAATGCAAACTCCCTCAT...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp ATGATCACTTCTGAGGGGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCAATGAGGGAGTTTGCATaGATGCAACATTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: MITSEGVYLPTKGFYSLPMREFA*MQHSES
Trigger: AGATTCAGAATGTTGCATCAATGCAAACTCCCTCAT...TGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCCCCTCAGAAGTGATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TTTACTGAAAACCCTGCCACAGGGGTTTGCCAGAGGAAAGTATTTCTCCAGTGTGATATGCAGAACAACTaGGATGGATTTCAGGTTAAT +
Preference number: 5 (lower is better)
Translates to: FTENPATGVCQRKVFLQCDMQNN*DGFQVN
Trigger: ATTAACCTGAAATCCATCCAAGTTGTTCTGCATATC...ACACTGGAGAAATACTTTCCTCTGGCAAACCCCTGTGGCAGGGTTTTCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTTTCCCAAAATGACTCTTCTGAATACTTaGATTTTGCAAGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: LLCRYLKGLHLARGFPKMTLLNT*ILQVML
Trigger: CAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGT...CATTTTGGGAAAGCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCAAACGTATCACAATCTaGCTTCAGCAGGAAATGACC +
Preference number: 5 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFKRITI*LQQEMT
Trigger: GGTCATTTCCTGCTGAAGCAAGATTGTGATACGTTT...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GAAGAACCACCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTGAGCTTGAAATGACTGCTAACTaGGACGTTCTGTATTTGTCT +
Preference number: 5 (lower is better)
Translates to: EEPPIWYYVHYLGDRIELEMTAN*DVLYLS
Trigger: AGACAAATACAGAACGTCCAAGTTAGCAGTCATTTC...AAGCTCAATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGGTGGTTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597747.5
CDS-3UTR CAA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTCTCTCATCCATCATTTaGCCAAGGCTTCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFLSSII*PRLLSF
Trigger: GAAGGAAAGAAGCCTTGGCAAAATGATGGATGAGAG...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCTGTAAGTTGTTATCTTaGGAAGAAGCTGGGTTAAGG +
Preference number: 5 (lower is better)
Translates to: HEITLLCRYLKGLHLARGCKLLS*EEAGLR
Trigger: CCTTAACCCAGCTTCTTCCAAAGATAACAACTTACA...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TTCATGGCACTGTTTCACACTCTTCTGAATACTTTGATTTTGCAAGTGATGCTGCTGAATACTTTGATTTaGCAAGTGATGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: FMALFHTLLNTLILQVMLLNTLI*QVMLQR
Trigger: CCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAG...CAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599115.5
ENST00000599177.5
CDS-3UTR CAA 90 bp GGGTTTATCTTCCCACCAAAGGCTTTTATAGTCTGCCACATTCATAGGATTTTTAAACGTATCACAATCTaGCTTCAGCAGGAAATGACC +
Preference number: 5 (lower is better)
Translates to: GFIFPPKAFIVCHIHRIFKRITI*LQQEMT
Trigger: GGTCATTTCCTGCTGAAGCAAGATTGTGATACGTTT...AAAAATCCTATGAATGTGGCAGACTATAAAAGCCTTTGGTGGGAAGATAAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGTTGGACGTTCTGTATTaGTCTCTTCTGAATCAGCTC +
Preference number: 5 (lower is better)
Translates to: SAFMKLLFFADILRAYIWLDVLY*SLLNQL
Trigger: GAGCTGATTCAGAAGAGACAAATACAGAACGTCCAA...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGTTGGACGTTCTGTATTaGTCTCTTCTGAATCAGCTC +
Preference number: 5 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLLDVLY*SLLNQL
Trigger: GAGCTGATTCAGAAGAGACAAATACAGAACGTCCAA...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GTTAAGGTTAGAATTGTGACAGAAAGCTCTCATCCATCATTTTGCCAAGGCTTCGAAATGACTGCTAACTaGGACGTTCTGTATTTGTCT +
Preference number: 5 (lower is better)
Translates to: VKVRIVTESSHPSFCQGFEMTAN*DVLYLS
Trigger: AGACAAATACAGAACGTCCAAGTTAGCAGTCATTTC...GAAGCCTTGGCAAAATGATGGATGAGAGCTTTCTGTCACAATTCTAACCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TTGATTTTGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTGATTTCTATTTGCCTGGGCCTGCATCATaGTCTCCTAAATTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: LILQVMLQRIINFPDFYLPGPAS*SPKFGK
Trigger: TTTCCCAAATTTAGGAGACAATGATGCAGGCCCAGG...CAAATAGAAATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CAA 90 bp CATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGCAAGAGGCGATATGCAGAACAACTaGGATGGATTTCAGGTTAAT +
Preference number: 5 (lower is better)
Translates to: HEITLLCRYLKGLHLARGDMQNN*DGFQVN
Trigger: ATTAACCTGAAATCCATCCAAGTTGTTCTGCATATC...GCCTCTTGCCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CTGAATACTTTGATTTTGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTGATCTGAATACTTTGATTTaGCAAGTGATGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: LNTLILQVMLQRIINFPDLNTLI*QVMLQR
Trigger: CCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAG...ATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599115.5
ENST00000599177.5
CDS-3UTR CAA 90 bp CTGAATACTTTGATTTTGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTGATAAACGTATCACAATCTaGCTTCAGCAGGAAATGACC +
Preference number: 5 (lower is better)
Translates to: LNTLILQVMLQRIINFPDKRITI*LQQEMT
Trigger: GGTCATTTCCTGCTGAAGCAAGATTGTGATACGTTT...ATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CAA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGGAAATGACTGCTAACTaGGACGTTCTGTATTTGTCT +
Preference number: 5 (lower is better)
Translates to: SAFMKLLFFADILRAYIWEMTAN*DVLYLS
Trigger: AGACAAATACAGAACGTCCAAGTTAGCAGTCATTTC...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGTGTAAGTTGTTATCTTaGGAAGAAGCTGGGTTAAGG +
Preference number: 5 (lower is better)
Translates to: SAFMKLLFFADILRAYIWCKLLS*EEAGLR
Trigger: CCTTAACCCAGCTTCTTCCAAAGATAACAACTTACA...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGTGTAAGTTGTTATCTTaGGAAGAAGCTGGGTTAAGG +
Preference number: 5 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLCKLLS*EEAGLR
Trigger: CCTTAACCCAGCTTCTTCCAAAGATAACAACTTACA...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CACACTCTTCTGAATACTTTGATTTTGCAAGTGATGCTGCAGAGGATCATCAATATGAGGGAGTTTGCATaGATGCAACATTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: HTLLNTLILQVMLQRIINMREFA*MQHSES
Trigger: AGATTCAGAATGTTGCATCAATGCAAACTCCCTCAT...ATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CAA 90 bp TCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGACTCTTCTGAATACTTaGATTTTGCAAGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: SAFMKLLFFADILRAYIWTLLNT*ILQVML
Trigger: CAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGT...CCAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGACTCTTCTGAATACTTaGATTTTGCAAGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLTLLNT*ILQVML
Trigger: CAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGT...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp CACACTCTTCTGAATACTTTGATTTTGCAAGTGATGCTGCAGAGGATCATCAATGATATGCAGAACAACTaGGATGGATTTCAGGTTAAT +
Preference number: 5 (lower is better)
Translates to: HTLLNTLILQVMLQRIINDMQNN*DGFQVN
Trigger: ATTAACCTGAAATCCATCCAAGTTGTTCTGCATATC...ATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CAA 90 bp GTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTACATCTGGAGATGTTATCTTACTaGTGTCAGAAAGAACCTCTT +
Preference number: 5 (lower is better)
Translates to: VCIHEITLLCRYLKGLHLEMLSY*CQKEPL
Trigger: AAGAGGTTCTTTCTGACACAAGTAAGATAACATCTC...CAGATGTAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602063.5
CDS-3UTR CAA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTAACTCTTCTGAATACTTaGATTTTGCAAGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLTLLNT*ILQVML
Trigger: CAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGT...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp ATTTTCCTGATTTCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTGAGACTCTTCTGAATACTTaGATTTTGCAAGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: IFLISIWYYVHYLGDRIETLLNT*ILQVML
Trigger: CAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGT...CTCAATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGAAATCAGGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599115.5
ENST00000599177.5
CDS-3UTR CAA 90 bp TCAATTTTCCTGATTTCTATTTGGTACTATGTTCACTACTTGGGTGACAGGATTTGTAAGTTGTTATCTTaGGAAGAAGCTGGGTTAAGG +
Preference number: 5 (lower is better)
Translates to: SIFLISIWYYVHYLGDRICKLLS*EEAGLR
Trigger: CCTTAACCCAGCTTCTTCCAAAGATAACAACTTACA...AATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGAAATCAGGAAAATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599177.5
CDS-3UTR CAA 90 bp CATGTAGTCTGCATTCATGAAATTACTCTTCTTTGCAGATATCTTAAGGGCCTAGATATGCAGAACAACTaGGATGGATTTCAGGTTAAT +
Preference number: 5 (lower is better)
Translates to: HVVCIHEITLLCRYLKGLDMQNN*DGFQVN
Trigger: ATTAACCTGAAATCCATCCAAGTTGTTCTGCATATC...TAGGCCCTTAAGATATCTGCAAAGAAGAGTAATTTCATGAATGCAGACTACATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000598071.6
ENST00000599177.5
ENST00000602063.5
CDS-3UTR CAA 90 bp TTGATTTTGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTGATTTCTATTTGACTCTTCTGAATACTTaGATTTTGCAAGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: LILQVMLQRIINFPDFYLTLLNT*ILQVML
Trigger: CAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGT...CAAATAGAAATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599115.5
ENST00000599177.5
CDS TCA 72 bp TGGGCTCCGGCCTCATCTCTCGGCCTCCTCAGTGCCTaGCGGCGACTATCCAGGGTCGGAGGCGTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: WAPASSLGLLSA*RRLSRVGGVPS
Trigger: GCTGGGAACGCCTCCGACCCTGGATAGTCGCCGTCAGGCACTGAGGAGGCCGAGAGATGAGGCCGGAGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376716.9
ENST00000391795.7
CDS GCA 72 bp TTGGTGGGCTCCGGCCTCATCTCTCGGCCTCCTCAGTaGCTGACGGCGACTATCCAGGGTCGGAGGCGTTCC +
Preference number: 6 (lower is better)
Translates to: LVGSGLISRPPQ*LTATIQGRRRS
Trigger: GGAACGCCTCCGACCCTGGATAGTCGCCGTCAGGCACTGAGGAGGCCGAGAGATGAGGCCGGAGCCCACCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000601178.5
CDS CCA 72 bp TCTTGTTCTCAGCACCTGTGGGTTCCCAGAACTTGGTaGGCTCCGGCCTCATCTCTCGGCCTCCTCAGTGCC +
Preference number: 6 (lower is better)
Translates to: SCSQHLWVPRTW*APASSLGLLSA
Trigger: GGCACTGAGGAGGCCGAGAGATGAGGCCGGAGCCCACCAAGTTCTGGGAACCCACAGGTGCTGAGAACAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594083.5
ENST00000599177.5
ENST00000601178.5
CDS TCA 72 bp TCCCCTGCGATAGGAATCGGACCCACGCTAAGCTCCTaGAAGAATTCCACTGGCGTCGCCAAACGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: SPAIGIGPTLSS*KNSTGVAKRWR
Trigger: GCGCCAGCGTTTGGCGACGCCAGTGGAATTCTTTCAGGAGCTTAGCGTGGGTCCGATTCCTATCGCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602063.5
CDS CCA 72 bp CATCCTCCAGTGTTAGGGATTCTTCCCAGAACTTGGTaGGCTCCGGCCTCATCTCTCGGCCTCCTCAGTGCC +
Preference number: 6 (lower is better)
Translates to: HPPVLGILPRTW*APASSLGLLSA
Trigger: GGCACTGAGGAGGCCGAGAGATGAGGCCGGAGCCCACCAAGTTCTGGGAAGAATCCCTAACACTGGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391795.7
ENST00000599115.5
CDS CCA 72 bp AATCGGACCCACGCTAAGCTCCTGAAAGAATTCCACTaGCGTCGCCAAACGCTGGCGCCGACAGATACCAGT +
Preference number: 6 (lower is better)
Translates to: NRTHAKLLKEFH*RRQTLAPTDTS
Trigger: ACTGGTATCTGTCGGCGCCAGCGTTTGGCGACGCCAGTGGAATTCTTTCAGGAGCTTAGCGTGGGTCCGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602063.5
CDS TCA 72 bp GTTGCCCAGGCTGGAGTGAGTAAGACTCCAGTGGCGTaGTCTCTGTTCACTGCAACCTCCATCTCCTGGGTT +
Preference number: 6 (lower is better)
Translates to: VAQAGVSKTPVA*SLFTATSISWV
Trigger: AACCCAGGAGATGGAGGTTGCAGTGAACAGAGATCACGCCACTGGAGTCTTACTCACTCCAGCCTGGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595114.1
ENST00000597905.5
ENST00000599631.5
CDS CCA 72 bp TCTTACTTGTGTCAGAAAGAACTTCCCAGAACTTGGTaGGCTCCGGCCTCATCTCTCGGCCTCCTCAGTGCC +
Preference number: 6 (lower is better)
Translates to: SYLCQKELPRTW*APASSLGLLSA
Trigger: GGCACTGAGGAGGCCGAGAGATGAGGCCGGAGCCCACCAAGTTCTGGGAAGTTCTTTCTGACACAAGTAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376716.9
ENST00000593650.5
ENST00000595114.1
ENST00000597905.5
ENST00000598071.6
CDS CAA 72 bp TCAGCACCTGTGGGCATGGCAGAGATGTTATCTTACTaGTGTCAGAAAGAACCTCTTGTAGTTCCCCTGCGA +
Preference number: 6 (lower is better)
Translates to: SAPVGMAEMLSY*CQKEPLVVPLR
Trigger: TCGCAGGGGAACTACAAGAGGTTCTTTCTGACACAAGTAAGATAACATCTCTGCCATGCCCACAGGTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602063.5
CDS TCA 72 bp CTTCTAGTGAATCCTCGGCATCAGGCAATATATCCATaGGACAAACCTGCATATGCACCTCCTGATGCACCT +
Preference number: 6 (lower is better)
Translates to: LLVNPRHQAIYP*DKPAYAPPDAP
Trigger: AGGTGCATCAGGAGGTGCATATGCAGGTTTGTCTCATGGATATATTGCCTGATGCCGAGGATTCACTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597747.5
ENST00000599115.5
ENST00000599177.5
CDS TCA 72 bp CCTGGGCCTGCATCATTGTCTCCTAAATTTGGGAAATaGCTGCTAACTTGGACGTTCTGTATTTGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: PGPASLSPKFGK*LLTWTFCICLF
Trigger: GAAGAGACAAATACAGAACGTCCAAGTTAGCAGTCATTTCCCAAATTTAGGAGACAATGATGCAGGCCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376716.9
ENST00000594083.5
ENST00000597747.5
ENST00000598071.6
ENST00000599177.5
ENST00000599631.5
ENST00000601178.5
ENST00000602063.5
CDS GCA 72 bp ATCATCAATTTTCCTGATTTCTGGCTGTCCACCTGGTaGTCCTCTACCAGAACAGATTCGAGAGTAGATTTC +
Preference number: 6 (lower is better)
Translates to: IINFPDFWLSTW*SSTRTDSRVDF
Trigger: GAAATCTACTCTCGAATCTGTTCTGGTAGAGGAGCACCAGGTGGACAGCCAGAAATCAGGAAAATTGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618049.4
CDS CAA 90 bp GGATCATCAATTTTCCTGATTTCTATTTGGTACTATGTTCACTACTaGGGTGACAGGATTGAGCTTCTAGTGAATCCTCGGCATCAGGCA +
Preference number: 6 (lower is better)
Translates to: GSSIFLISIWYYVHY*GDRIELLVNPRHQA
Trigger: TGCCTGATGCCGAGGATTCACTAGAAGCTCAATCCTGTCACCCAAGTAGTGAACATAGTACCAAATAGAAATCAGGAAAATTGATGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599115.5
ENST00000599177.5
CDS CAA 90 bp ATTCTGTTCATGGCACTGTTTCACACTCTTCTGAATACTTTGATTTaGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTGATTTCTGC +
Preference number: 6 (lower is better)
Translates to: ILFMALFHTLLNTLI*QVMLQRIINFPDFC
Trigger: GCAGAAATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCATGAACAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593650.5
ENST00000594083.5
ENST00000598071.6
ENST00000618487.4
CDS CAA 90 bp ATTCTGTTCATGGCACTGTTTCACACTCTTCTGAATACTTTGATTTaGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTGATTTCTGG +
Preference number: 6 (lower is better)
Translates to: ILFMALFHTLLNTLI*QVMLQRIINFPDFW
Trigger: CCAGAAATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCATGAACAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618049.4
CDS CAA 90 bp ATTCTGTTCATGGCACTGTTTCACACTCTTCTGAATACTTTGATTTaGCAAGTGATGCTGCAGAGGATCATCAATTTTCCTGATTTCAGA +
Preference number: 6 (lower is better)
Translates to: ILFMALFHTLLNTLI*QVMLQRIINFPDFR
Trigger: TCTGAAATCAGGAAAATTGATGATCCTCTGCAGCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCATGAACAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376716.9
ENST00000391795.7
ENST00000602063.5