Pregenerated sensors for ZNF613 (Homo sapiens)
Ensembl gene IDs: ENSG00000176024Ensembl transcript IDs: ENST00000293471.11, ENST00000391794.8, ENST00000593395.1, ENST00000601794.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGGACTTTTCCATGATCATTAAGGGCTTTCCACCTTaGATATATCAGTTTGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PLIPTGVLFLNKDFSMIIKGFPP*IYQFVP Trigger: AGGAACAAACTGATATATTCAAGGTGGAAAGCCCTT...AATGATCATGGAAAAGTCCTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| 3UTR-3UTR TCA 90 bp | CTGATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTAGCTCACTGAAGATGTaGTCTATGGTCACTGATGAG | + |
|
Preference number: 2 (lower is better) Translates to: LIEISKILLFTGLICFVCSSLKM*SMVTDE Trigger: CTCATCAGTGACCATAGATCACATCTTCAGTGAGCT...ACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| 3UTR CCA 72 bp | AAAGTTTCTCTCCTGTGTAAACCCCCTGATACCTACTaGCGTACTGTTTCTGAACAAGGACTTTTCCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: KVSLLCKPPDTY*RTVSEQGLFHD Trigger: ATCATGGAAAAGTCCTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGGGTTTACACAGGAGAGAAACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| 3UTR-3UTR CAA 90 bp | CTGATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTCAAGGGCTTTCCACCTaGAATATATCAGTTTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LIEISKILLFTGLICFVCQGLST*NISVCS Trigger: GGAACAAACTGATATATTCAAGGTGGAAAGCCCTTG...ACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR TCA 90 bp | CCCTCTGAGGATAAGGCAGAATGTACCACTAGCAACCCTGCCACATTCATAGCCATCCTCCAGGGTCAGTaGTTCCTGGGACTTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSEDKAECTTSNPATFIAILQGQ*FLGLDH Trigger: ATGATCAAGTCCCAGGAATCACTGACCCTGGAGGAT...GGCTATGAATGTGGCAGGGTTGCTAGTGGTACATTCTGCCTTATCCTCAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CCA 90 bp | CCCTCTGAGGATAAGGCAGAATGTACCACTAGCAACCCTGCCACATTCATAGCCCTTCTGGCAACAGGCTaGCTCACAATGGCTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSEDKAECTTSNPATFIALLATG*LTMATL Trigger: CAAAGTAGCCATTGTGAGCCAGCCTGTTGCCAGAAG...GGCTATGAATGTGGCAGGGTTGCTAGTGGTACATTCTGCCTTATCCTCAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR TCA 90 bp | ACCAAATTTGTGGATGTTCTGAATCTCCTTCAACGGATGCAGAAAAGAATGGGCCGGGAGCGATCTCTATaGGGACCAATGCCCACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TKFVDVLNLLQRMQKRMGRERSL*GPMPTC Trigger: GCACGTGGGCATTGGTCCTCATAGAGATCGCTCCCG...GCCCATTCTTTTCTGCATCCGTTGAAGGAGATTCAGAACATCCACAAATTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601794.1 |
||
| CDS-3UTR GCA 90 bp | CCCTCTGAGGATAAGGCAGAATGTACCACTAGCAACCCTGCCACATTCATAGCCAGTCTCTCCTTGAGCTaGCCTCAATTTCTGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSEDKAECTTSNPATFIASLSLS*PQFLAR Trigger: TCTAGCCAGAAATTGAGGGCAGCTCAAGGAGAGACT...GGCTATGAATGTGGCAGGGTTGCTAGTGGTACATTCTGCCTTATCCTCAGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR TCA 90 bp | CCCTCTGAGGATAAGGCAGAATGTACCACTAGCAACCCTGCCACATTCATAGCCAGCTCACTGAAGATGTaGTCTATGGTCACTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSEDKAECTTSNPATFIASSLKM*SMVTDE Trigger: CTCATCAGTGACCATAGATCACATCTTCAGTGAGCT...GGCTATGAATGTGGCAGGGTTGCTAGTGGTACATTCTGCCTTATCCTCAGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTCCTGTGTAAACCCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGATGGTATCCAGGTCCTaGAACCTCCTCCTCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLSCVNPLIPTGVLFLNKMVSRS*NLLLTS Trigger: TGAGGTGAGGAGGAGGTTCCAGGACCTGGATACCAT...CTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGGGTTTACACAGGAGAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CCA 90 bp | CCCTCTGAGGATAAGGCAGAATGTACCACTAGCAACCCTGCCACATTCATAGCCGCTGCCCTCAATTTCTaGCTAGAAATCTTGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSEDKAECTTSNPATFIAAALNF*LEILVS Trigger: AGAGACCAAGATTTCTAGCCAGAAATTGAGGGCAGC...GGCTATGAATGTGGCAGGGTTGCTAGTGGTACATTCTGCCTTATCCTCAGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CCA 90 bp | CCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGGACTTTTCCATGATCATTCATCCCTGCAAAGGATaGTATCCAGGTCCTGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: PLIPTGVLFLNKDFSMIIHPCKG*YPGPGT Trigger: GGTTCCAGGACCTGGATACCATCCTTTGCAGGGATG...AATGATCATGGAAAAGTCCTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CCA 90 bp | AGCAACCCTGCCACATTCATAGCCTTCAAAGGTCTTCCAAAAGTTTCTCTCCTGCAGGCTGGCTCACAATaGCTACTTTGCTCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNPATFIAFKGLPKVSLLQAGSQ*LLCSLL Trigger: AAGCAGAGAGCAAAGTAGCCATTGTGAGCCAGCCTG...CAGGAGAGAAACTTTTGGAAGACCTTTGAAGGCTATGAATGTGGCAGGGTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTCCTGTGTAAACCCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGGCCACAGAAGGCATCTaGAGAGTCACCATGTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: FLSCVNPLIPTGVLFLNKATEGI*RVTMLT Trigger: TGTTAACATGGTGACTCTGCAGATGCCTTCTGTGGC...CTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGGGTTTACACAGGAGAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTCCTGTGTAAACCCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGGGCTACTTTGCTCTCTaGTTGGAACGCACTGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSCVNPLIPTGVLFLNKGYFAL*LERTVS Trigger: ACTAACAGTGCGTTCCAAGCAGAGAGCAAAGTAGCC...CTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGGGTTTACACAGGAGAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CCA 90 bp | CCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGGACTTTTCCATGATCATTCTGAGACTGAACTTCTaGCAACAGGCTGGCTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PLIPTGVLFLNKDFSMIILRLNF*QQAGSQ Trigger: TTGTGAGCCAGCCTGTTGCCAGAAGTTCAGTCTCAG...AATGATCATGGAAAAGTCCTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR TCA 90 bp | AGCAACCCTGCCACATTCATAGCCTTCAAAGGTCTTCCAAAAGTTTCTCTCCTGAATCTTGGTCTCTGGTaGATTACATCCCTGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNPATFIAFKGLPKVSLLNLGLW*ITSLQR Trigger: CCTTTGCAGGGATGTAATTCACCAGAGACCAAGATT...CAGGAGAGAAACTTTTGGAAGACCTTTGAAGGCTATGAATGTGGCAGGGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR GCA 90 bp | GTGGACCAAATTTGTGGATGTTCTGAATCTCCTTCAACGGATGCAGAAAAGAATGGACCAATGCCCACGTaGAACTGCATACAGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VDQICGCSESPSTDAEKNGPMPT*NCIQCV Trigger: CACACACTGTATGCAGTTGCACGTGGGCATTGGTCC...ATTCTTTTCTGCATCCGTTGAAGGAGATTCAGAACATCCACAAATTTGGTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601794.1 |
||
| CDS-3UTR CCA 90 bp | CCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGGACTTTTCCATGATCATTCCCCCTGATACCTACTaGCGTACTGTTTCTGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PLIPTGVLFLNKDFSMIIPPDTY*RTVSEQ Trigger: TTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGGG...AATGATCATGGAAAAGTCCTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR TCA 90 bp | ATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTTCTGTGAGATGCCATCTCTaGTTTTGCGGGGAACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: IEISKILLFTGLICFVCSVRCHL*FCGEPT Trigger: GGTGGGTTCCCCGCAAAATCAGAGATGGCATCTCAC...AGAACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR GCA 90 bp | CCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGGACTTTTCCATGATCATTGGTGAATTACATCCCTaGAAAGGATGGTATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLIPTGVLFLNKDFSMIIGELHP*KGWYPG Trigger: ACCTGGATACCATCCTTTGCAGGGATGTAATTCACC...AATGATCATGGAAAAGTCCTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR GCA 90 bp | TGGACCAAATTTGTGGATGTTCTGAATCTCCTTCAACGGATGCAGAAAAGAATGCTCTATGAGGACCAATaGCCACGTGCAACTGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: WTKFVDVLNLLQRMQKRMLYEDQ*PRATAY Trigger: GTATGCAGTTGCACGTGGGCATTGGTCCTCATAGAG...CATTCTTTTCTGCATCCGTTGAAGGAGATTCAGAACATCCACAAATTTGGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601794.1 |
||
| CDS-3UTR TCA 90 bp | ATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTTCTGAAGTGTCTTGCTCCTaGAGTCAGGACCTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IEISKILLFTGLICFVCSEVSCS*SQDLWV Trigger: AACCCACAGGTCCTGACTTCAGGAGCAAGACACTTC...AGAACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR TCA 90 bp | CTGATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTGGCTTGATACCCCACTaGCACGAGGTTGCTATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LIEISKILLFTGLICFVCGLIPH*HEVAIV Trigger: AACTATAGCAACCTCGTGTCAGTGGGGTATCAAGCC...ACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR TCA 90 bp | AGCGGTCACAGAGTGGACCAAATTTGTGGATGTTCTGAATCTCCTTCAACGGATATGATAAACAAGGCATaGCAAGTGGGAGAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGHRVDQICGCSESPSTDMINKA*QVGESF Trigger: AAAGCTTTCTCCCACTTGTCATGCCTTGTTTATCAT...ATCCGTTGAAGGAGATTCAGAACATCCACAAATTTGGTCCACTCTGTGACCGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601794.1 |
||
| CDS-3UTR TCA 90 bp | AGCAACCCTGCCACATTCATAGCCTTCAAAGGTCTTCCAAAAGTTTCTCTCCTGGTATGTGATAAGCTATaGCTCTCTGAGCAAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: SNPATFIAFKGLPKVSLLVCDKL*LSEQGF Trigger: AAATCCTTGCTCAGAGAGTCATAGCTTATCACATAC...CAGGAGAGAAACTTTTGGAAGACCTTTGAAGGCTATGAATGTGGCAGGGTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGACCAAATTTGTGGATGTTCTGAATCTCCTTCAACGGATGCAGAAAAGATCTCCTTCAACGGATaGAGAAAAGAATGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVDQICGCSESPSTDAEKISFNG*RKEWAR Trigger: CCTTGCCCATTCTTTTCTGCATCCGTTGAAGGAGAT...CTTTTCTGCATCCGTTGAAGGAGATTCAGAACATCCACAAATTTGGTCCACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601794.1 |
||
| CDS-3UTR TCA 90 bp | ATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTTCTTCTGTAGTCTCTCCTTaGGCTGCCCTCAATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IEISKILLFTGLICFVCSSVVSP*AALNFW Trigger: CCAGAAATTGAGGGCAGCTCAAGGAGAGACTACAGA...AGAACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR TCA 90 bp | AGCAACCCTGCCACATTCATAGCCTTCAAAGGTCTTCCAAAAGTTTCTCTCCTGAGTCTTTATCCTGTATaGGATCACGTGTATGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: SNPATFIAFKGLPKVSLLSLYPV*DHVYVI Trigger: TATCACATACACGTGATCTCATACAGGATAAAGACT...CAGGAGAGAAACTTTTGGAAGACCTTTGAAGGCTATGAATGTGGCAGGGTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR TCA 90 bp | ACCAAATTTGTGGATGTTCTGAATCTCCTTCAACGGATGCAGAAAAGAATGGGCAATTTGTGGATGTTCTaGATCTCCTTCAACGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TKFVDVLNLLQRMQKRMGNLWMF*ISFNGC Trigger: GCATCCGTTGAAGGAGATTCAGAACATCCACAAATT...GCCCATTCTTTTCTGCATCCGTTGAAGGAGATTCAGAACATCCACAAATTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601794.1 |
||
| CDS-3UTR TCA 90 bp | ATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTTCTGAACCTGCACTTTCCTaGATTATTCCACTTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IEISKILLFTGLICFVCSEPALS*IIPLLG Trigger: GCCCAGAAGTGGAATAATTCAGGAAAGTGCAGGTTC...AGAACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR TCA 90 bp | ATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTTCTTTAGTTAATGAGGTCTaGGCTGCCACAGAAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: IEISKILLFTGLICFVCSLVNEV*AATEGI Trigger: GATGCCTTCTGTGGCAGCTCAGACCTCATTAACTAA...AGAACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR GCA 90 bp | ATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTTCTTCACAATGGCTACTTTaGTCTCTGCTTGGAACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IEISKILLFTGLICFVCSSQWLL*SLLGTH Trigger: GTGCGTTCCAAGCAGAGAGCAAAGTAGCCATTGTGA...AGAACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR GCA 90 bp | CCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGGACTTTTCCATGATCATTTTCACAGGGCTTATTTaGTTCGTGTGTTCTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: PLIPTGVLFLNKDFSMIIFTGLI*FVCSFI Trigger: TATGAAAGAACACACGAAGCAAATAAGCCCTGTGAA...AATGATCATGGAAAAGTCCTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CCA 90 bp | GAGTGGACCAAATTTGTGGATGTTCTGAATCTCCTTCAACGGATGCAGAAAAGAACTGCATACAGTGTGTaGTTACACATTTCTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EWTKFVDVLNLLQRMQKRTAYSV*LHISLL Trigger: CAAGAGAGAAATGTGTAACCACACACTGTATGCAGT...TCTTTTCTGCATCCGTTGAAGGAGATTCAGAACATCCACAAATTTGGTCCACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601794.1 |
||
| CDS-3UTR TCA 90 bp | TCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTTCTTTGTTCATGCTTGGCATaGAGGAAGGATTTCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SKSLKYSFSQGLFASCVLCSCLA*RKDFPS Trigger: AGATGGGAAATCCTTCCTTCATGCCAAGCATGAACA...AAGAACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CCA 90 bp | CCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGGACTTTTCCATGATCATTATTTCTGGACAGATTTaGCTGTGGATTTCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLIPTGVLFLNKDFSMIIISGQI*LWISFS Trigger: AGAAAATGAAATCCACAGCCAAATCTGTCCAGAAAT...AATGATCATGGAAAAGTCCTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR GCA 90 bp | CTGATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTCTCTTCAGACATCTTTaGTTTTGTGAGTGCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LIEISKILLFTGLICFVCLFRHL*FCECIC Trigger: ACAGATGCACTCACAAAAGCAAAGATGTCTGAAGAG...ACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CCA 90 bp | CTGATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTACTTTGCTCTCTGCTTaGAACGCACTGTTAGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LIEISKILLFTGLICFVCTLLSA*NALLVN Trigger: ATTAACTAACAGTGCGTTCCAAGCAGAGAGCAAAGT...ACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR TCA 90 bp | ATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTTCTGATTGTCAACTTTCTTaGTTTCTGGACAGATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IEISKILLFTGLICFVCSDCQLS*FLDRFG Trigger: GCCAAATCTGTCCAGAAATCAAGAAAGTTGACAATC...AGAACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR TCA 90 bp | TCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTTCTTATGATAAACAAGGCATaGCAAGTGGGAGAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKSLKYSFSQGLFASCVLMINKA*QVGESF Trigger: AAAGCTTTCTCCCACTTGTCATGCCTTGTTTATCAT...AAGAACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR TCA 90 bp | TCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTTCTTGAGTGCATCTGTAGATaGTTGTCAACTTTCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SKSLKYSFSQGLFASCVLECICR*LSTFLI Trigger: AATCAAGAAAGTTGACAATCATCTACAGATGCACTC...AAGAACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS TCA 90 bp | CCCTCCCCCAGCCTCCAAGCCGGCCTACGGCGGCCGAGGAAGGTCTaGAGTTGCAGGTGTACGGAGCACGGACGACTGGGAGGTAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSPSLQAGLRRPRKV*SCRCTEHGRLGGSK Trigger: CTTACTACCTCCCAGTCGTCCGTGCTCCGTACACCTGCAACTTCAGACCTTCCTCGGCCGCCGTAGGCCGGCTTGGAGGCTGGGGGAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593395.1 |
||
| CDS CCA 90 bp | GGACGACTGGGAGGTAGTAAGTTCGCGTCCTCTCGTCACGGATACTaGAGGCAGCCATCTTTGAATCCTGCACGTACGGAAGGTAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRLGGSKFASSRHGY*RQPSLNPARTEGKV Trigger: CACTTTACCTTCCGTACGTGCAGGATTCAAAGATGGCTGCCTCCAGTATCCGTGACGAGAGGACGCGAACTTACTACCTCCCAGTCGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593395.1 |
||
| CDS TCA 90 bp | GTAAGTTCGCGTCCTCTCGTCACGGATACTGGAGGCAGCCATCTTTaGATCCTGCACGTACGGAAGGTAAAGTGGACCTTTTCTGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VSSRPLVTDTGGSHL*ILHVRKVKWTFSAQ Trigger: TTGGGCAGAAAAGGTCCACTTTACCTTCCGTACGTGCAGGATTCAAAGATGGCTGCCTCCAGTATCCGTGACGAGAGGACGCGAACTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593395.1 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTCCTGTGTAAACCCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGATGCCATCTCTGATTTaGCGGGGAACCCACCGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FLSCVNPLIPTGVLFLNKMPSLI*RGTHRD Trigger: GTCTCGGTGGGTTCCCCGCAAAATCAGAGATGGCAT...CTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGGGTTTACACAGGAGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CAA 90 bp | CCCTCTGAGGATAAGGCAGAATGTACCACTAGCAACCCTGCCACATTCATAGCCAGGAGAGAGGATCACTaGAGGTCAGGAGTTCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PSEDKAECTTSNPATFIARREDH*RSGVQD Trigger: ATCTTGAACTCCTGACCTCAAGTGATCCTCTCTCCT...GGCTATGAATGTGGCAGGGTTGCTAGTGGTACATTCTGCCTTATCCTCAGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS GCA 90 bp | ATAGCGCGGGACGGTGAAGAACTCCATATTTTGGCACCTAAATCCTaGGCCCAAGTTTCATTTATTTTCAGAGGGTCGAGCTTAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: IARDGEELHILAPKS*AQVSFIFRGSSLAK Trigger: CTTGGCTAAGCTCGACCCTCTGAAAATAAATGAAACTTGGGCGCAGGATTTAGGTGCCAAAATATGGAGTTCTTCACCGTCCCGCGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593395.1 |
||
| CDS GCA 90 bp | AATTGTCTTGAGGCCAAATACGGGAGCGATCTCTATGAGGACCAATaGCCACGTGCAACTGCATACAGTGTGTGGTTACACATTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NCLEAKYGSDLYEDQ*PRATAYSVWLHISL Trigger: GAGAGAAATGTGTAACCACACACTGTATGCAGTTGCACGTGGGCATTGGTCCTCATAGAGATCGCTCCCGTATTTGGCCTCAAGACAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601794.1 |
||
| CDS CCA 90 bp | GTGCAAATTCTACTATCTGCTGAGACTGAACTTCTGGCAACAGGCTaGCTCACAATGGCTACTTTGCTCTCTGCTTGGAACGCACTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VQILLSAETELLATG*LTMATLLSAWNALL Trigger: TAACAGTGCGTTCCAAGCAGAGAGCAAAGTAGCCATTGTGAGCCAGCCTGTTGCCAGAAGTTCAGTCTCAGCAGATAGTAGAATTTGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000293471.11 ENST00000391794.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTCCTGTGTAAACCCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGGTCTGTAGTCTCTCCTaGAGCTGCCCTCAATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLSCVNPLIPTGVLFLNKVCSLS*SCPQFL Trigger: CAGAAATTGAGGGCAGCTCAAGGAGAGACTACAGAC...CTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGGGTTTACACAGGAGAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CAA 90 bp | CCCTCTGAGGATAAGGCAGAATGTACCACTAGCAACCCTGCCACATTCATAGCCTTCTGGCTAGAAATCTaGGTCTCTGGTGAATTACAT | + |
|
Preference number: 5 (lower is better) Translates to: PSEDKAECTTSNPATFIAFWLEI*VSGELH Trigger: ATGTAATTCACCAGAGACCAAGATTTCTAGCCAGAA...GGCTATGAATGTGGCAGGGTTGCTAGTGGTACATTCTGCCTTATCCTCAGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CAA 90 bp | CCCTCTGAGGATAAGGCAGAATGTACCACTAGCAACCCTGCCACATTCATAGCCGGGTTTATCTATGTTTaGAGTTCGCTGATGCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: PSEDKAECTTSNPATFIAGFIYV*SSLMLN Trigger: ATTAAGCATCAGCGAACTCAAAACATAGATAAACCC...GGCTATGAATGTGGCAGGGTTGCTAGTGGTACATTCTGCCTTATCCTCAGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CAA 90 bp | GCGGTCACAGAGTGGACCAAATTTGTGGATGTTCTGAATCTCCTTCAACGGATGGTTCTCCGATGTCTGTaGAGACATGATTTATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AVTEWTKFVDVLNLLQRMVLRCL*RHDLSL Trigger: CAGAGATAAATCATGTCTCAACAGACATCGGAGAAC...CATCCGTTGAAGGAGATTCAGAACATCCACAAATTTGGTCCACTCTGTGACCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601794.1 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTCCTGTGTAAACCCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGGTTCTCCGATGTCTGTaGAGACATGATTTATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLSCVNPLIPTGVLFLNKVLRCL*RHDLSL Trigger: CAGAGATAAATCATGTCTCAACAGACATCGGAGAAC...CTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGGGTTTACACAGGAGAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTCCTGTGTAAACCCCCTGATACCTACTGGCGTACTGTTTCTGAACAAGCAAGGGCTTTCCACCTaGAATATATCAGTTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLSCVNPLIPTGVLFLNKQGLST*NISVCS Trigger: GGAACAAACTGATATATTCAAGGTGGAAAGCCCTTG...CTTGTTCAGAAACAGTACGCCAGTAGGTATCAGGGGGTTTACACAGGAGAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CAA 90 bp | CTGATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTCTCACAATGGCTACTTaGCTCTCTGCTTGGAACGCA | + |
|
Preference number: 5 (lower is better) Translates to: LIEISKILLFTGLICFVCLTMAT*LSAWNA Trigger: TGCGTTCCAAGCAGAGAGCAAAGTAGCCATTGTGAG...ACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CAA 90 bp | ATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTTCTTCCTCCTCACCTCACTaGAAGTGTCTTGCTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IEISKILLFTGLICFVCSSSSPH*KCLAPE Trigger: TTCAGGAGCAAGACACTTCAAGTGAGGTGAGGAGGA...AGAACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS-3UTR CAA 90 bp | ATCGAAATCTCTAAAATACTCCTTTTCACAGGGCTTATTTGCTTCGTGTGTTCTTTTCACAGGGCTTATTaGCTTCGTGTGTTCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IEISKILLFTGLICFVCSFHRAY*LRVFFH Trigger: ATGAAAGAACACACGAAGCAAATAAGCCCTGTGAAA...AGAACACACGAAGCAAATAAGCCCTGTGAAAAGGAGTATTTTAGAGATTTCGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000293471.11 |
||
| CDS TCA 72 bp | AGCCTCCAAGCCGGCCTACGGCGGCCGAGGAAGGTCTaGAGTTGCAGGTGTACGGAGCACGGACGACTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLQAGLRRPRKV*SCRCTEHGRLG Trigger: TCCCAGTCGTCCGTGCTCCGTACACCTGCAACTTCAGACCTTCCTCGGCCGCCGTAGGCCGGCTTGGAGGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593395.1 |
||
| CDS CCA 72 bp | CATCTCTGTAGTCCCAGCTACTCGGGAAAGCTGAGGTaGGAAAATCACCTGAGCCCCGGGAGATGGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLCSPSYSGKLR*ENHLSPGRWRL Trigger: CAGCCTCCATCTCCCGGGGCTCAGGTGATTTTCCCACCTCAGCTTTCCCGAGTAGCTGGGACTACAGAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000391794.8 |
||
| CDS CCA 72 bp | AGGTCTGAAGTTGCAGGTGTACGGAGCACGGACGACTaGGAGGTAGTAAGTTCGCGTCCTCTCGTCACGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RSEVAGVRSTDD*EVVSSRPLVTD Trigger: ATCCGTGACGAGAGGACGCGAACTTACTACCTCCCAGTCGTCCGTGCTCCGTACACCTGCAACTTCAGACCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593395.1 |
||
| CDS CCA 72 bp | GGAGGTAGTAAGTTCGCGTCCTCTCGTCACGGATACTaGAGGCAGCCATCTTTGAATCCTGCACGTACGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GGSKFASSRHGY*RQPSLNPARTE Trigger: TTCCGTACGTGCAGGATTCAAAGATGGCTGCCTCCAGTATCCGTGACGAGAGGACGCGAACTTACTACCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593395.1 |
||
| CDS CAA 72 bp | GCGTCCTCTCGTCACGGATACTGGAGGCAGCCATCTTaGAATCCTGCACGTACGGAAGGTAAAGTGGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASSRHGYWRQPS*NPARTEGKVDL Trigger: AAGGTCCACTTTACCTTCCGTACGTGCAGGATTCAAAGATGGCTGCCTCCAGTATCCGTGACGAGAGGACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593395.1 |
||
| CDS TCA 72 bp | CGTCCTCTCGTCACGGATACTGGAGGCAGCCATCTTTaGATCCTGCACGTACGGAAGGTAAAGTGGACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RPLVTDTGGSHL*ILHVRKVKWTF Trigger: AAAGGTCCACTTTACCTTCCGTACGTGCAGGATTCAAAGATGGCTGCCTCCAGTATCCGTGACGAGAGGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593395.1 |
||
| CDS GCA 72 bp | GAGGCCAAATACGGGAGCGATCTCTATGAGGACCAATaGCCACGTGCAACTGCATACAGTGTGTGGTTACAC | + |
|
Preference number: 6 (lower is better) Translates to: EAKYGSDLYEDQ*PRATAYSVWLH Trigger: GTGTAACCACACACTGTATGCAGTTGCACGTGGGCATTGGTCCTCATAGAGATCGCTCCCGTATTTGGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601794.1 |
||
| CDS CAA 90 bp | AGTAAGTTCGCGTCCTCTCGTCACGGATACTGGAGGCAGCCATCTTaGAATCCTGCACGTACGGAAGGTAAAGTGGACCTTTTCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SKFASSRHGYWRQPS*NPARTEGKVDLFCP Trigger: TGGGCAGAAAAGGTCCACTTTACCTTCCGTACGTGCAGGATTCAAAGATGGCTGCCTCCAGTATCCGTGACGAGAGGACGCGAACTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593395.1 |
||
| CDS CCA 72 bp | CTACTATCTGCTGAGACTGAACTTCTGGCAACAGGCTaGCTCACAATGGCTACTTTGCTCTCTGCTTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LLSAETELLATG*LTMATLLSAWN Trigger: GTTCCAAGCAGAGAGCAAAGTAGCCATTGTGAGCCAGCCTGTTGCCAGAAGTTCAGTCTCAGCAGATAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000293471.11 ENST00000391794.8 |
||
| CDS CAA 72 bp | GAACTTCTGGCAACAGGCTGGCTCACAATGGCTACTTaGCTCTCTGCTTGGAACGCACTGTTAGTTAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: ELLATGWLTMAT*LSAWNALLVNE Trigger: CTCATTAACTAACAGTGCGTTCCAAGCAGAGAGCAAAGTAGCCATTGTGAGCCAGCCTGTTGCCAGAAGTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000293471.11 ENST00000391794.8 |
||
| CDS CAA 90 bp | CCCAAGTATTCAGGGATAGCGCGGGACGGTGAAGAACTCCATATTTaGGCACCTAAATCCTGCGCCCAAGTTTCATTTATTTTCAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PKYSGIARDGEELHI*APKSCAQVSFIFRG Trigger: CCCTCTGAAAATAAATGAAACTTGGGCGCAGGATTTAGGTGCCAAAATATGGAGTTCTTCACCGTCCCGCGCTATCCCTGAATACTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593395.1 |
||
| CDS CAA 72 bp | TCAGGGATAGCGCGGGACGGTGAAGAACTCCATATTTaGGCACCTAAATCCTGCGCCCAAGTTTCATTTATT | + |
|
Preference number: 6 (lower is better) Translates to: SGIARDGEELHI*APKSCAQVSFI Trigger: AATAAATGAAACTTGGGCGCAGGATTTAGGTGCCAAAATATGGAGTTCTTCACCGTCCCGCGCTATCCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593395.1 |
||
| CDS GCA 72 bp | GACGGTGAAGAACTCCATATTTTGGCACCTAAATCCTaGGCCCAAGTTTCATTTATTTTCAGAGGGTCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: DGEELHILAPKS*AQVSFIFRGSS Trigger: GCTCGACCCTCTGAAAATAAATGAAACTTGGGCGCAGGATTTAGGTGCCAAAATATGGAGTTCTTCACCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593395.1 |
||