RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF609 (Homo sapiens)

Ensembl gene IDs: ENSG00000180357

Ensembl transcript IDs: ENST00000326648.4, ENST00000416172.1, ENST00000558680.5, ENST00000559364.1

Found 803 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCAGACCAAGGGCTTGGGGAACAGAGCAGTGGCTTCTCTGGGCTaGGGCCATGTTCCCCTGGTTGCTTCCCGTGCCTTCATCTCCACA +
Preference number: 1 (lower is better)
Translates to: QQTKGLGNRAVASLG*GHVPLVASRAFIST
Trigger: TGTGGAGATGAAGGCACGGGAAGCAACCAGGGGAACATGGCCTCAGCCCAGAGAAGCCACTGCTCTGTTCCCCAAGCCCTTGGTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 90 bp TCCAGCAGCAGACCAAGGGCTTGGGGAACAGAGCAGTGGCTTCTCTaGGCTGAGGCCATGTTCCCCTGGTTGCTTCCCGTGCCTTCATCT +
Preference number: 1 (lower is better)
Translates to: SSSRPRAWGTEQWLL*AEAMFPWLLPVPSS
Trigger: AGATGAAGGCACGGGAAGCAACCAGGGGAACATGGCCTCAGCCCAGAGAAGCCACTGCTCTGTTCCCCAAGCCCTTGGTCTGCTGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR GCA 90 bp ACCCTCTTGGTTGGGGTGACTCAGGTGGGGTGGGATGACGGTGTCTaGACTAGCTACTTCCACGGAGGAAAGGGAGGTCACTGCTCAGAG +
Preference number: 1 (lower is better)
Translates to: TLLVGVTQVGWDDGV*TSYFHGGKGGHCSE
Trigger: CTCTGAGCAGTGACCTCCCTTTCCTCCGTGGAAGTAGCTAGTGCAGACACCGTCATCCCACCCCACCTGAGTCACCCCAACCAAGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR GCA 90 bp GATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTaGTCCCAGGGGCTGCCTTCTGGGCCTTGCCCTAAGGTGACCTGG +
Preference number: 1 (lower is better)
Translates to: DIRWLDDRTSPRTAG*SQGLPSGPCPKVTW
Trigger: CCAGGTCACCTTAGGGCAAGGCCCAGAAGGCAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 90 bp TTCAGAGGGAAGACTAGGCCCGGCAGGCATCAGGATCTGCCATGGTaGCTTTCACCTGCTCTTCTGAGCAGCTCCTACTCTTCAGGGGAG +
Preference number: 1 (lower is better)
Translates to: FRGKTRPGRHQDLPW*LSPALLSSSYSSGE
Trigger: CTCCCCTGAAGAGTAGGAGCTGCTCAGAAGAGCAGGTGAAAGCCACCATGGCAGATCCTGATGCCTGCCGGGCCTAGTCTTCCCTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR TCA 90 bp CCTGAGGAAGAGGTAGGGTCAGGTAGTCCGGAGGTCTGGTGGAGGTaGGATAGCCAAGGGTCTGCCTTCAGTCATGGTGGAAACGGCAAA +
Preference number: 1 (lower is better)
Translates to: PEEEVGSGSPEVWWR*DSQGSAFSHGGNGK
Trigger: TTTGCCGTTTCCACCATGACTGAAGGCAGACCCTTGGCTATCTCACCTCCACCAGACCTCCGGACTACCTGACCCTACCTCTTCCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR GCA 90 bp GAACAGAGCAGTGGCTTCTCTGGGCTGAGGCCATGTTCCCCTGGTTaGTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAAC +
Preference number: 1 (lower is better)
Translates to: EQSSGFSGLRPCSPG*FPCLHLHRGHNSHN
Trigger: GTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAACCAGGGGAACATGGCCTCAGCCCAGAGAAGCCACTGCTCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 90 bp TATTTCAGAGGGAAGACTAGGCCCGGCAGGCATCAGGATCTGCCATaGTGGCTTTCACCTGCTCTTCTGAGCAGCTCCTACTCTTCAGGG +
Preference number: 1 (lower is better)
Translates to: YFRGKTRPGRHQDLP*WLSPALLSSSYSSG
Trigger: CCCTGAAGAGTAGGAGCTGCTCAGAAGAGCAGGTGAAAGCCACCATGGCAGATCCTGATGCCTGCCGGGCCTAGTCTTCCCTCTGAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 90 bp ACTAAGATCATCTTCCCAGAGGAGGGACTCAGTTCTAACCCCTCCTaGGGCTGCAGGCACCTGTCCTTCCAAGTCAAGCAGAAGGCAAGG +
Preference number: 1 (lower is better)
Translates to: TKIIFPEEGLSSNPS*GCRHLSFQVKQKAR
Trigger: CCTTGCCTTCTGCTTGACTTGGAAGGACAGGTGCCTGCAGCCCCAGGAGGGGTTAGAACTGAGTCCCTCCTCTGGGAAGATGATCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR TCA 90 bp GGCAGAAACCTAGGGAAAAGGCCTGTAGATCAGAGGGGATCCTCTTaGGCAGATGGTGACCCTAAGCCTCTCAAGTGTAGGGTTCCAGGG +
Preference number: 1 (lower is better)
Translates to: GRNLGKRPVDQRGSS*ADGDPKPLKCRVPG
Trigger: CCCTGGAACCCTACACTTGAGAGGCTTAGGGTCACCATCTGCTCAAGAGGATCCCCTCTGATCTACAGGCCTTTTCCCTAGGTTTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR TCA 90 bp CCGGCAGGCATCAGGATCTGCCATGGTGGCTTTCACCTGCTCTTCTaGGCAGCTCCTACTCTTCAGGGGAGACTTGGATATGAGGATCAA +
Preference number: 1 (lower is better)
Translates to: PAGIRICHGGFHLLF*AAPTLQGRLGYEDQ
Trigger: TTGATCCTCATATCCAAGTCTCCCCTGAAGAGTAGGAGCTGCTCAGAAGAGCAGGTGAAAGCCACCATGGCAGATCCTGATGCCTGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR TCA 90 bp GATGTGCCAGAGGCAAAGACCAAAATACCGACAGCAAAGAAAGCATaGGCTACCACTGGAATACAGGCACTAAGAGGGCACCACCACCCA +
Preference number: 1 (lower is better)
Translates to: DVPEAKTKIPTAKKA*ATTGIQALRGHHHP
Trigger: TGGGTGGTGGTGCCCTCTTAGTGCCTGTATTCCAGTGGTAGCTCATGCTTTCTTTGCTGTCGGTATTTTGGTCTTTGCCTCTGGCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR TCA 90 bp CACACCCATTCTCCTCCAGCCCTGCAAGTTCCATTTCCTAAAGCATaGACTAAGATCATCTTCCCAGAGGAGGGACTCAGTTCTAACCCC +
Preference number: 1 (lower is better)
Translates to: HTHSPPALQVPFPKA*TKIIFPEEGLSSNP
Trigger: GGGGTTAGAACTGAGTCCCTCCTCTGGGAAGATGATCTTAGTTCATGCTTTAGGAAATGGAACTTGCAGGGCTGGAGGAGAATGGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR GCA 90 bp AAAAGGGTTACAAGGCAGGTAGTCTGGACACTGGATTCAACAGCTTaGCATCAGCCAGGGAAAGTGAAGCTGAGGATGCATATGGAGCAG +
Preference number: 1 (lower is better)
Translates to: KRVTRQVVWTLDSTA*HQPGKVKLRMHMEQ
Trigger: CTGCTCCATATGCATCCTCAGCTTCACTTTCCCTGGCTGATGGCAAGCTGTTGAATCCAGTGTCCAGACTACCTGCCTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 90 bp CCAGAAAACAATGCTGGGCAGAAAAGGGTTACAAGGCAGGTAGTCTaGACACTGGATTCAACAGCTTGCCATCAGCCAGGGAAAGTGAAG +
Preference number: 1 (lower is better)
Translates to: PENNAGQKRVTRQVV*TLDSTACHQPGKVK
Trigger: CTTCACTTTCCCTGGCTGATGGCAAGCTGTTGAATCCAGTGTCCAGACTACCTGCCTTGTAACCCTTTTCTGCCCAGCATTGTTTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 90 bp TCTGCTGCCCCATTCTCAGAGTCTCCCTGGGAGGCAAAGCTTATATaGCAAAGCAACATTATTAAGGGACAAAACTCCCTGGCACCAGGA +
Preference number: 1 (lower is better)
Translates to: SAAPFSESPWEAKLI*QSNIIKGQNSLAPG
Trigger: TCCTGGTGCCAGGGAGTTTTGTCCCTTAATAATGTTGCTTTGCCATATAAGCTTTGCCTCCCAGGGAGACTCTGAGAATGGGGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR TCA 90 bp ATGAACAGCTCACCACAAGGCCACTGTTTTGCAGGAATAAGCTGCTaGAGTTTAATGCTGCCTGAGCTGACCCTAGACTCACACCCATTC +
Preference number: 1 (lower is better)
Translates to: MNSSPQGHCFAGISC*SLMLPELTLDSHPF
Trigger: GAATGGGTGTGAGTCTAGGGTCAGCTCAGGCAGCATTAAACTTCAGCAGCTTATTCCTGCAAAACAGTGGCCTTGTGGTGAGCTGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CCA 90 bp TCACTTTTGGCACTCTGGTCACACACTCCCTTTTCCAGCCTACACTaGTGTCTGTCAGTCTTTATCTCTCTCTCTCAATCCAGAGGGTCA +
Preference number: 1 (lower is better)
Translates to: SLLALWSHTPFSSLH*CLSVFISLSQSRGS
Trigger: TGACCCTCTGGATTGAGAGAGAGAGATAAAGACTGACAGACACCAGTGTAGGCTGGAAAAGGGAGTGTGTGACCAGAGTGCCAAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 90 bp CAGATGGTGACCCTAAGCCTCTCAAGTGTAGGGTTCCAGGGTCCTTaGAAATCAACTACTACTGGGCATTGTGCTTACTGTCCCCTATTT +
Preference number: 1 (lower is better)
Translates to: QMVTLSLSSVGFQGP*KSTTTGHCAYCPLF
Trigger: AAATAGGGGACAGTAAGCACAATGCCCAGTAGTAGTTGATTTCCAAGGACCCTGGAACCCTACACTTGAGAGGCTTAGGGTCACCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 90 bp GCCCCAAACCGGAGATTGTTGTTTCTCAAAAACCGCTCCTCTGCATaGTTCCTAACTTCCTTTCCTTTAACTTGCCTCTTCTGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: APNRRLLFLKNRSSA*FLTSFPLTCLFCSS
Trigger: GGAGGAGCAGAAGAGGCAAGTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAACAATCTCCGGTTTGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR GCA 90 bp TCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACTTGCCTCTTCTaGTCCTCCCAGTCCAGAAATGTTCTCTCCCTGCACAGCATGTTT +
Preference number: 1 (lower is better)
Translates to: SSAWFLTSFPLTCLF*SSQSRNVLSLHSMF
Trigger: AAACATGCTGTGCAGGGAGAGAACATTTCTGGACTGGGAGGAGCAGAAGAGGCAAGTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CCA 90 bp ATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAAGATATCAGATaGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAG +
Preference number: 1 (lower is better)
Translates to: IGLYISVASNEEDIR*LDDRTSPRTAGCSQ
Trigger: CTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTCATTTGAGGCCACAGATATATACAGCCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 90 bp GGCAAAGACCAAAATACCGACAGCAAAGAAAGCATGAGCTACCACTaGAATACAGGCACTAAGAGGGCACCACCACCCAAACATACACAT +
Preference number: 1 (lower is better)
Translates to: GKDQNTDSKESMSYH*NTGTKRAPPPKHTH
Trigger: ATGTGTATGTTTGGGTGGTGGTGCCCTCTTAGTGCCTGTATTCCAGTGGTAGCTCATGCTTTCTTTGCTGTCGGTATTTTGGTCTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CCA 90 bp ATGAGCCACTGTATTATTAGTGGAAGAAACTCACAGACCTGCTACTaGAGAAGCCCAGATGTTGCTAAGAGCTACAGATGTGCCAGAGGC +
Preference number: 1 (lower is better)
Translates to: MSHCIISGRNSQTCY*RSPDVAKSYRCARG
Trigger: GCCTCTGGCACATCTGTAGCTCTTAGCAACATCTGGGCTTCTCCAGTAGCAGGTCTGTGAGTTTCTTCCACTAATAATACAGTGGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR GCA 90 bp AAGGGAATGAGCCACTGTATTATTAGTGGAAGAAACTCACAGACCTaGTACTGGAGAAGCCCAGATGTTGCTAAGAGCTACAGATGTGCC +
Preference number: 1 (lower is better)
Translates to: KGMSHCIISGRNSQT*YWRSPDVAKSYRCA
Trigger: GGCACATCTGTAGCTCTTAGCAACATCTGGGCTTCTCCAGTAGCAGGTCTGTGAGTTTCTTCCACTAATAATACAGTGGCTCATTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR TCA 90 bp CACGAGGAGACTTTGATTCCTAATAGTTGTGGGAGATACCTGGCATaGAGCTACACCTTTAATGGCCAATCTCTTCCTAGGCCAAACTGT +
Preference number: 1 (lower is better)
Translates to: HEETLIPNSCGRYLA*SYTFNGQSLPRPNC
Trigger: ACAGTTTGGCCTAGGAAGAGATTGGCCATTAAAGGTGTAGCTTCATGCCAGGTATCTCCCACAACTATTAGGAATCAAAGTCTCCTCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CCA 90 bp ACAAATAAAGGTCTGATGCCAATCTCTACCAACAAGTGTCTGAGGTaGGCAAAGACAAGGTGGGAAGGTCTCAACTCAGACTACAGAAAG +
Preference number: 1 (lower is better)
Translates to: TNKGLMPISTNKCLR*AKTRWEGLNSDYRK
Trigger: CTTTCTGTAGTCTGAGTTGAGACCTTCCCACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGATTGGCATCAGACCTTTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR TCA 90 bp TCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTGTGGTTCTTTaGCCTTGTGATGTGTGGAGAGAGTTCGGTAAGAGAAGGAAATTT +
Preference number: 1 (lower is better)
Translates to: SFHRVPSYPSKRVVL*PCDVWREFGKRRKF
Trigger: AAATTTCCTTCTCTTACCGAACTCTCTCCACACATCACAAGGTCAAAGAACCACACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR TCA 90 bp GTATTCTTAGCTGAACATACTGCATCTTTCAGCCCAATTATAATCTaGAGGGCAGCCACCCAATCAGTCCCTGCACCTCTATGTGAGAAA +
Preference number: 1 (lower is better)
Translates to: VFLAEHTASFSPIII*RAATQSVPAPLCEK
Trigger: TTTCTCACATAGAGGTGCAGGGACTGATTGGGTGGCTGCCCTTCAGATTATAATTGGGCTGAAAGATGCAGTATGTTCAGCTAAGAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR GCA 90 bp CAGAATGAGTGGAAAGGGCAGGAATGCAGGGCCATGCCTGCCCAATaGAAAAGAAAATTACTCCTAACGGTTTCTTTACAATATATACAG +
Preference number: 1 (lower is better)
Translates to: QNEWKGQECRAMPAQ*KRKLLLTVSLQYIQ
Trigger: CTGTATATATTGTAAAGAAACCGTTAGGAGTAATTTTCTTTTGCATTGGGCAGGCATGGCCCTGCATTCCTGCCCTTTCCACTCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 90 bp CCTGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTTaGCAGCTATTAAACCACGAGGAGACTTTGATTCCTAATAGTTGT +
Preference number: 1 (lower is better)
Translates to: PVLPSQAEGKVSLHC*QLLNHEETLIPNSC
Trigger: ACAACTATTAGGAATCAAAGTCTCCTCGTGGTTTAATAGCTGCCAACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CCA 90 bp GAGGAAGGTAGAGGAAAAGAGAAAGCGGCCAAACAATGGTTTGGTTaGGCTGTGTTTCAGAGTATACCACCCTTTAAAATTCTGATCAAA +
Preference number: 1 (lower is better)
Translates to: EEGRGKEKAAKQWFG*AVFQSIPPFKILIK
Trigger: TTTGATCAGAATTTTAAAGGGTGGTATACTCTGAAACACAGCCCAACCAAACCATTGTTTGGCCGCTTTCTCTTTTCCTCTACCTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR GCA 90 bp CCAAAGGCGTATTGTTTATCAACTATTATGAGTCTGATGATGAAATaGCAGTCAAGCTGGGAAACAAATAAAGGTCTGATGCCAATCTCT +
Preference number: 1 (lower is better)
Translates to: PKAYCLSTIMSLMMK*QSSWETNKGLMPIS
Trigger: AGAGATTGGCATCAGACCTTTATTTGTTTCCCAGCTTGACTGGCATTTCATCATCAGACTCATAATAGTTGATAAACAATACGCCTTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CCA 90 bp TGTTTATCAACTATTATGAGTCTGATGATGAAATGCCAGTCAAGCTaGGAAACAAATAAAGGTCTGATGCCAATCTCTACCAACAAGTGT +
Preference number: 1 (lower is better)
Translates to: CLSTIMSLMMKCQSS*ETNKGLMPISTNKC
Trigger: ACACTTGTTGGTAGAGATTGGCATCAGACCTTTATTTGTTTCCCAGCTTGACTGGCATTTCATCATCAGACTCATAATAGTTGATAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR GCA 90 bp GTAATTTCAATATTCAAATCTTCCTCATTGGCTAGTAGTCAACACTaGTACTCTGCACCACAGAATTCAGTCAAGAAACTTCCCAAATTT +
Preference number: 1 (lower is better)
Translates to: VISIFKSSSLASSQH*YSAPQNSVKKLPKF
Trigger: AAATTTGGGAAGTTTCTTGACTGAATTCTGTGGTGCAGAGTAGCAGTGTTGACTACTAGCCAATGAGGAAGATTTGAATATTGAAATTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR TCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAGGCCTTGCCCTAAGGTaGCCTGGCAGACTCCAAGGT +
Preference number: 2 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPGLALR*PGRLQG
Trigger: ACCTTGGAGTCTGCCAGGTCACCTTAGGGCAAGGCC...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGTGGGGAGCCCTGTGCTaGTGTTGGAACCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLWGALC*CWNPCP
Trigger: GGGGCAGGGGTTCCAACACCAGCACAGGGCTCCCCA...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGGCTCCAGCACCAGCTTaGTCCCAGTGTCCCTGGGGA +
Preference number: 2 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGAPAPA*SQCPWG
Trigger: TCCCCAGGGACACTGGGAGCAAGCTGGTGCTGGAGC...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR TCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGGAGGTCTGGTGGAGGTaGGATAGCCAAGGGTCTGCC +
Preference number: 2 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGEVWWR*DSQGSA
Trigger: GGCAGACCCTTGGCTATCTCACCTCCACCAGACCTC...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAGGTGAGGGGTATGGCTaGTGTGCTGTCTTCAGACCT +
Preference number: 2 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPGEGYG*CAVFRP
Trigger: AGGTCTGAAGACAGCACAGCAGCCATACCCCTCACC...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGCCTGGTTGCTTCCCGTaGCTTCATCTCCACAGAGGC +
Preference number: 2 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGPGCFP*LHLHRG
Trigger: GCCTCTGTGGAGATGAAGGCACGGGAAGCAACCAGG...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCACAGCTCTCCAAGCCTTaGCTGATCTATCTGGGGATG +
Preference number: 2 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPQLSKP*LIYLGM
Trigger: CATCCCCAGATAGATCAGGCAAGGCTTGGAGAGCTG...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGGAGGCCATGTTCCCCTaGTTGCTTCCCGTGCCTTCA +
Preference number: 2 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLEAMFP*LLPVPS
Trigger: TGAAGGCACGGGAAGCAACCAGGGGAACATGGCCTC...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CAA 90 bp CCCCCTGCCTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTaGGTCTTCCTTTCCAGGCTAGGTTGTGAGCGTTTATATGTGCTC +
Preference number: 2 (lower is better)
Translates to: PPASQAAQGHVGADA*VFLSRLGCERLYVL
Trigger: GAGCACATATAAACGCTCACAACCTAGCCTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAGGCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp AGGGCAGCCACCCAATCAGTCCCTGCACCTCTATGTGAGAAAATGGGTTCCATTAACCCCTCCTGGGGCTaGAGGCACCTGTCCTTCCAA +
Preference number: 2 (lower is better)
Translates to: RAATQSVPAPLCEKMGSINPSWG*RHLSFQ
Trigger: TTGGAAGGACAGGTGCCTGCAGCCCCAGGAGGGGTT...AATGGAACCCATTTTCTCACATAGAGGTGCAGGGACTGATTGGGTGGCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR TCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCGTGGCTTCTCTGGGCTaGGGCCATGTTCCCCTGGTT +
Preference number: 2 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCVASLG*GHVPLV
Trigger: AACCAGGGGAACATGGCCTCAGCCCAGAGAAGCCAC...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAACCCAGTGCTTGGGGGTaGGGGTCCCTCCCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: VLVDRGIGLYISVASNEEPSAWG*GSLPGG
Trigger: CCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGG...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGGGGGTATGGCTGCTGTaGTGTCTTCAGACCTTACCC +
Preference number: 2 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMGVWLL*CLQTLP
Trigger: GGGTAAGGTCTGAAGACAGCACAGCAGCCATACCCC...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAAGGAACCCCTGCCCCCTaGCTCACAGGCAGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: QITSHGQWPLKQNMCYQEGTPAP*LTGSSR
Trigger: CCTTGAGCTGCCTGTGAGGCAGGGGGCAGGGGTTCC...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAAATCTCCACAGCTGCTaGTTCATGTTATTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPNLHSC*FMLFQR
Trigger: CCTCTGAAATAACATGAAGCAGCAGCTGTGGAGATT...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGGGTGCTCCCAGGGGCTaGCTTCTGGGCCTTGCCCTA +
Preference number: 2 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGGAPRG*LLGLAL
Trigger: TAGGGCAAGGCCCAGAAGGCAGCCCCTGGGAGCACC...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR TCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCCTATGGGAAGCCCCGTaGGCAATGTCTGTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGLWEAP*AMSVRA
Trigger: GGCCCTCACAGACATTGCTCACGGGGCTTCCCATAG...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCTAGTTCCTCCACATaGTGCCAATTCCCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCSSSST*CQFPGC
Trigger: GCACCCTGGGAATTGGCAGCATGTGGAGGAACTAGA...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CCA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTGTCTGCCTTCAGTCATaGTGGAAACGGCAAACAGGA +
Preference number: 2 (lower is better)
Translates to: VASRAFISTEATIVITVAVCLQS*WKRQTG
Trigger: TCCTGTTTGCCGTTTCCACCATGACTGAAGGCAGAC...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGTTTTCCAGCCTACACTaGTGTCTGTCAGTCTTTATC +
Preference number: 2 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGFSSLH*CLSVFI
Trigger: GATAAAGACTGACAGACACCAGTGTAGGCTGGAAAA...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CAA 90 bp GAAAAGGGTTACAAGGCAGGTAGTCTGGACACTGGATTCAACAGCTaGCCATCAGCCAGGGAAAGTGAAGCTGAGGATGCATATGGAGCA +
Preference number: 2 (lower is better)
Translates to: EKGYKAGSLDTGFNS*PSARESEAEDAYGA
Trigger: TGCTCCATATGCATCCTCAGCTTCACTTTCCCTGGCTGATGGCAAGCTGTTGAATCCAGTGTCCAGACTACCTGCCTTGTAACCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR TCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTCAGCTCTCCAGCTCCTaGGGAAGAGGTAGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: TQEITISFHRVPSYPSKRQLSSS*GRGRVR
Trigger: CCTGACCCTACCTCTTCCTCAGGAGCTGGAGAGCTG...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR TCA 90 bp GTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCTCAGACAGCCAGCACAGGATaGGCCAAGCTAGTAACCAGC +
Preference number: 2 (lower is better)
Translates to: VCYPYIETSQTTGKPISQTASTG*AKLVTS
Trigger: GCTGGTTACTAGCTTGGCTCATCCTGTGCTGGCTGT...CTGAGAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR GCA 90 bp GGAAAGGCACCCTCAGGACCAGACTGTCCAAAAGGGTTGAGGGAACAGGGGAAGAATTTATACTGCATCTaGTGGGATCAGCTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: GKAPSGPDCPKGLREQGKNLYCI*WDQLKA
Trigger: TGCTTTCAGCTGATCCCAGCAGATGCAGTATAAATT...CTTCCCCTGTTCCCTCAACCCTTTTGGACAGTCTGGTCCTGAGGGTGCCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR CCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGGAGCAGTGGCTTCTCTaGGCTGAGGCCATGTTCCCC +
Preference number: 2 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGEQWLL*AEAMFP
Trigger: GGGGAACATGGCCTCAGCCCAGAGAAGCCACTGCTC...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGATGTGCTCATGTAAATaGGGAGAAGTCTCCACATTT +
Preference number: 2 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQMCSCK*GEVSTF
Trigger: AAATGTGGAGACTTCTCCCCATTTACATGAGCACAT...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAATGCCCTAAGGTGACCTaGCAGACTCCAAGGTTCCCC +
Preference number: 2 (lower is better)
Translates to: QITSHGQWPLKQNMCYQECPKVT*QTPRFP
Trigger: GGGGAACCTTGGAGTCTGCCAGGTCACCTTAGGGCA...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CAA 90 bp TCTCCTCCCCATGTAGAGGTGGGCAGCAAATCTTTCACTCAGCACTaGTCAAGAATCTCCACAGCTGCTGCTTCATGTTATTTCAGAGGG +
Preference number: 2 (lower is better)
Translates to: SPPHVEVGSKSFTQH*SRISTAAASCYFRG
Trigger: CCCTCTGAAATAACATGAAGCAGCAGCTGTGGAGATTCTTGACAAGTGCTGAGTGAAAGATTTGCTGCCCACCTCTACATGGGGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCCCATGTTCCCCTGGTTaGTTCCCGTGCCTTCATCTC +
Preference number: 2 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGPCSPG*FPCLHL
Trigger: GAGATGAAGGCACGGGAAGCAACCAGGGGAACATGG...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CAA 90 bp TTAGTGGAAGAAACTCACAGACCTGCTACTGGAGAAGCCCAGATGTaGCTAAGAGCTACAGATGTGCCAGAGGCAAAGACCAAAATACCG +
Preference number: 2 (lower is better)
Translates to: LVEETHRPATGEAQM*LRATDVPEAKTKIP
Trigger: CGGTATTTTGGTCTTTGCCTCTGGCACATCTGTAGCTCTTAGCAACATCTGGGCTTCTCCAGTAGCAGGTCTGTGAGTTTCTTCCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR CCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAAAGCAGACCAAGGGCTTaGGGAACAGAGCAGTGGCTT +
Preference number: 2 (lower is better)
Translates to: VLVDRGIGLYISVASNEESRPRA*GTEQWL
Trigger: AAGCCACTGCTCTGTTCCCCAAGCCCTTGGTCTGCT...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR TCA 90 bp CTAATAGTTGTGGGAGATACCTGGCATGAAGCTACACCTTTAATGGCCAATCTCCTACCAACAAGTGTCTaGGGTGGGCAAAGACAAGGT +
Preference number: 2 (lower is better)
Translates to: LIVVGDTWHEATPLMANLLPTSV*GGQRQG
Trigger: ACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAG...GAGATTGGCCATTAAAGGTGTAGCTTCATGCCAGGTATCTCCCACAACTATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR TCA 90 bp CTGCAGGCACCTGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTTACCTCAAAGTACAATaGGTACCTCTTGCCCTCAAA +
Preference number: 2 (lower is better)
Translates to: LQAPVLPSQAEGKVSLHCYLKVQ*VPLALK
Trigger: TTTGAGGGCAAGAGGTACTCATTGTACTTTGAGGTA...ACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACAGGTGCCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR GCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAACACAGACGTCATTCATaGTCCAGCACCAGCTTGCTC +
Preference number: 2 (lower is better)
Translates to: VLVDRGIGLYISVASNEEHRRHS*SSTSLL
Trigger: GAGCAAGCTGGTGCTGGAGCATGAATGACGTCTGTG...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCTGCCCAGTTGCATCTTaGGGGCATCAGAGTAGACAA +
Preference number: 2 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGCPVAS*GHQSRQ
Trigger: TTGTCTACTCTGATGCCCCCAAGATGCAACTGGGCA...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CCA 90 bp AGTTTCTTGAAGCCAGATGTAGGGAACAGTCTAATGGGCCTGGAACAGAAGCAAAACAAGTGTCTGAGGTaGGCAAAGACAAGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: SFLKPDVGNSLMGLEQKQNKCLR*AKTRWE
Trigger: TTCCCACCTTGTCTTTGCCCACCTCAGACACTTGTT...TTGCTTCTGTTCCAGGCCCATTAGACTGTTCCCTACATCTGGCTTCAAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CAA 90 bp TCAGGACCAGACTGTCCAAAAGGGTTGAGGGAACAGGGGAAGGAATaGAGAAAGCAGGTTCTTGCTTATGGTTACATGAAACTGTATAGC +
Preference number: 2 (lower is better)
Translates to: SGPDCPKGLREQGKE*RKQVLAYGYMKLYS
Trigger: GCTATACAGTTTCATGTAACCATAAGCAAGAACCTGCTTTCTCAATTCCTTCCCCTGTTCCCTCAACCCTTTTGGACAGTCTGGTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR TCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCGGGGAGACTTGGATATaGGGATCAAAGAGCCAAATG +
Preference number: 2 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGGETWI*GSKSQM
Trigger: CATTTGGCTCTTTGATCCTCATATCCAAGTCTCCCC...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCGACATCTCCAAGAACTaGTGGGTGCTCCCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: NKATKSSSLSQYKEYKASDISKN*WVLPGA
Trigger: AGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTC...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCGCCATGCCTGCCCAATaGAAAAGAAAATTACTCCTA +
Preference number: 2 (lower is better)
Translates to: WLINRLGLVVLALGSKFFAMPAQ*KRKLLL
Trigger: TAGGAGTAATTTTCTTTTGCATTGGGCAGGCATGGC...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGAGGAATGCAGGGCCATaGCTGCCCAATGCAAAAGAA +
Preference number: 2 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGRNAGP*LPNAKE
Trigger: TTCTTTTGCATTGGGCAGGCATGGCCCTGCATTCCT...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CAA 90 bp GCCGGCAATAGAACACTTCGTAGATATGCCATGAAATTTAGCCCTTaGTTCTACCAGAGACCCAACAGCACCATTTATCCCATCAAGAAC +
Preference number: 2 (lower is better)
Translates to: AGNRTLRRYAMKFSP*FYQRPNSTIYPIKN
Trigger: GTTCTTGATGGGATAAATGGTGCTGTTGGGTCTCTGGTAGAACAAAGGGCTAAATTTCATGGCATATCTACGAAGTGTTCTATTGCCGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CAA 90 bp AGTACAATGAGTACCTCTTGCCCTCAAAATGTGCCCCTTCGCTCTTaGGTAGCCGGCAATAGAACACTTCGTAGATATGCCATGAAATTT +
Preference number: 2 (lower is better)
Translates to: STMSTSCPQNVPLRS*VAGNRTLRRYAMKF
Trigger: AAATTTCATGGCATATCTACGAAGTGTTCTATTGCCGGCTACCAAAGAGCGAAGGGGCACATTTTGAGGGCAAGAGGTACTCATTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR TCA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACAAGTTTAATGCTGCCTaGGCTGACCCTAGACTCACA +
Preference number: 2 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNKFNAA*ADPRLT
Trigger: TGTGAGTCTAGGGTCAGCTCAGGCAGCATTAAACTT...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR TCA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACCCCTGCACCTCTATGTaGGAAAATGGGTTCCATTTG +
Preference number: 2 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNPCTSM*ENGFHL
Trigger: CAAATGGAACCCATTTTCTCACATAGAGGTGCAGGG...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR GCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATTGCCAATTCCCAGGGTaGAAAGCACTAGGGAGATGC +
Preference number: 2 (lower is better)
Translates to: NHVLVDRGIGLYISVASNCQFPG*KALGRC
Trigger: GCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCA...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR GCA 90 bp TTTCAGCCCAATTATAATCTGAAGGGCAGCCACCCAATCAGTCCCTGCACCTCTCTGGGCTTAGAAGGTTaGAACATAAGTACTCTAAAA +
Preference number: 2 (lower is better)
Translates to: FQPNYNLKGSHPISPCTSLGLEG*NISTLK
Trigger: TTTTAGAGTACTTATGTTGCAACCTTCTAAGCCCAG...AGAGGTGCAGGGACTGATTGGGTGGCTGCCCTTCAGATTATAATTGGGCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CAA 90 bp AATCACCAGGCCCAGCCAGTAATTTCAATATTCAAATCTTCCTCATaGGCTAGTAGTCAACACTGCTACTCTGCACCACAGAATTCAGTC +
Preference number: 2 (lower is better)
Translates to: NHQAQPVISIFKSSS*ASSQHCYSAPQNSV
Trigger: GACTGAATTCTGTGGTGCAGAGTAGCAGTGTTGACTACTAGCCAATGAGGAAGATTTGAATATTGAAATTACTGGCTGGGCCTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR TCA 90 bp GTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCTCAGCTATCTTTCAAAAACTaGAGCACAGTCTCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: VCYPYIETSQTTGKPISQLSFKN*STVSFP
Trigger: AGGGAAAGAGACTGTGCTTCAGTTTTTGAAAGATAG...CTGAGAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR GCA 90 bp TGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTTGGCAGCTATTAGTCTGATGATGAAATaGCAGTCAAGCTGGGAAACA +
Preference number: 2 (lower is better)
Translates to: CPSKSSRRQGIITLLAAISLMMK*QSSWET
Trigger: TGTTTCCCAGCTTGACTGGCATTTCATCATCAGACT...AATAGCTGCCAACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR CCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCAGCTCAAGGCCATGTTaGGGCAGATGCCTTGGTCTT +
Preference number: 2 (lower is better)
Translates to: NKATKSSSLSQYKEYKASSSRPC*GRCLGL
Trigger: AAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCT...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGTTGGTCTGGTGGTCTTaGCCCTTGGTAGCAAATTTT +
Preference number: 2 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGLVWWS*PLVANF
Trigger: AAAATTTGCTACCAAGGGCCAAGACCACCAGACCAA...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CCA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACGTTGTGGGAGATACCTaGCATGAAGCTACACCTTTA +
Preference number: 2 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNVVGDT*HEATPL
Trigger: TAAAGGTGTAGCTTCATGCCAGGTATCTCCCACAAC...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR TCA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACATTCCCTGCTGCAGCTaGTCTAATTACAGAGAAATC +
Preference number: 2 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNIPCCS*SNYREI
Trigger: GATTTCTCTGTAATTAGATCAGCTGCAGCAGGGAAT...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR CCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTGAGGAAGATATCAGATaGCTAGATGACAGGACATCT +
Preference number: 2 (lower is better)
Translates to: TQEITISFHRVPSYPSKREEDIR*LDDRTS
Trigger: AGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTTGTAGACAGAGGAATTaGGCTGTATATATCTGTGGC +
Preference number: 2 (lower is better)
Translates to: TQEITISFHRVPSYPSKRCRQRN*AVYICG
Trigger: GCCACAGATATATACAGCCCAATTCCTCTGTCTACA...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CCA 90 bp TTCTGTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCGTATCATTACACTGTTaGCAGCTATTAAACCACGAG +
Preference number: 2 (lower is better)
Translates to: FCLLSLHRNVPNHRQAHFVSLHC*QLLNHE
Trigger: CTCGTGGTTTAATAGCTGCCAACAGTGTAATGATAC...GAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR TCA 90 bp TGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTTGGCAGCTATTTTCGTAGATATGCCATaGAATTTAGCCCTTTGTTCT +
Preference number: 2 (lower is better)
Translates to: CPSKSSRRQGIITLLAAIFVDMP*NLALCS
Trigger: AGAACAAAGGGCTAAATTTCATGGCATATCTACGAA...AATAGCTGCCAACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR GCA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACGAAATCAATTTATACTaGATCTGCTGGGATCAGCTG +
Preference number: 2 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNEINLY*ICWDQL
Trigger: CAGCTGATCCCAGCAGATGCAGTATAAATTGATTTC...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR CCA 90 bp GTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCTCAGGAGGCAAAGCTTATATaGCAAAGCAACATTATTAAG +
Preference number: 2 (lower is better)
Translates to: VCYPYIETSQTTGKPISQEAKLI*QSNIIK
Trigger: CTTAATAATGTTGCTTTGCCATATAAGCTTTGCCTC...CTGAGAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR TCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCTATCAGATGGCTAGATaGCAGGACATCTCCAAGAAC +
Preference number: 2 (lower is better)
Translates to: NKATKSSSLSQYKEYKASYQMAR*QDISKN
Trigger: GTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATA...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR TCA 90 bp CCAGTAATTTCAATATTCAAATCTTCCTCATTGGCTAGTAGTCAACACTGCTACACCACGAGGAGACTTTaGTTCCTAATAGTTGTGGGA +
Preference number: 2 (lower is better)
Translates to: PVISIFKSSSLASSQHCYTTRRL*FLIVVG
Trigger: TCCCACAACTATTAGGAATCAAAGTCTCCTCGTGGT...GTAGCAGTGTTGACTACTAGCCAATGAGGAAGATTTGAATATTGAAATTACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR GCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGTGAGCGTTTATATGTaGTCATGTAAATGGGGAGAA +
Preference number: 2 (lower is better)
Translates to: NHVLVDRGIGLYISVASNVSVYM*SCKWGE
Trigger: TTCTCCCCATTTACATGAGCACATATAAACGCTCAC...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CAA 90 bp TCCCATCAAGAACCGTACTCAATCTACATTATCACCAAAGGCGTATaGTTTATCAACTATTATGAGTCTGATGATGAAATGCCAGTCAAG +
Preference number: 2 (lower is better)
Translates to: SHQEPYSIYIITKGV*FINYYESDDEMPVK
Trigger: CTTGACTGGCATTTCATCATCAGACTCATAATAGTTGATAAACAATACGCCTTTGGTGATAATGTAGATTGAGTACGGTTCTTGATGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR TCA 90 bp CCAGTAATTTCAATATTCAAATCTTCCTCATTGGCTAGTAGTCAACACTGCTACACTGGTAAAAGGGAATaGGCCACTGTATTATTAGTG +
Preference number: 2 (lower is better)
Translates to: PVISIFKSSSLASSQHCYTGKRE*ATVLLV
Trigger: CACTAATAATACAGTGGCTCATTCCCTTTTACCAGT...GTAGCAGTGTTGACTACTAGCCAATGAGGAAGATTTGAATATTGAAATTACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR CCA 90 bp CCAGTAATTTCAATATTCAAATCTTCCTCATTGGCTAGTAGTCAACACTGCTACAAATGCCAGTCAAGCTaGGAAACAAATAAAGGTCTG +
Preference number: 2 (lower is better)
Translates to: PVISIFKSSSLASSQHCYKCQSS*ETNKGL
Trigger: CAGACCTTTATTTGTTTCCCAGCTTGACTGGCATTT...GTAGCAGTGTTGACTACTAGCCAATGAGGAAGATTTGAATATTGAAATTACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR TCA 72 bp GCTCCCAGGGGCTGCCTTCTGGGCCTTGCCCTAAGGTaGCCTGGCAGACTCCAAGGTTCCCCAAGCTGGGGG +
Preference number: 3 (lower is better)
Translates to: APRGCLLGLALR*PGRLQGSPSWG
Trigger: CCCCCAGCTTGGGGAACCTTGGAGTCTGCCAGGTCACCTTAGGGCAAGGCCCAGAAGGCAGCCCCTGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 72 bp CCTGCCCCCTGCCTCACAGGCAGCTCAAGGCCATGTTaGGGCAGATGCCTTGGTCTTCCTTTCCAGGCTAGG +
Preference number: 3 (lower is better)
Translates to: PAPCLTGSSRPC*GRCLGLPFQAR
Trigger: CCTAGCCTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAGGCAGGGGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CAA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCACAGCAGACCAAGGGCTaGGGGAACAGAGCAGTGGCT +
Preference number: 3 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPQQTKG*GNRAVA
Trigger: AGCCACTGCTCTGTTCCCCAAGCCCTTGGTCTGCTG...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR GCA 72 bp GTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATaGTCCAGCACCAGCTTGCTCCCAGTGTCCCTGGGG +
Preference number: 3 (lower is better)
Translates to: VGTQVLLHRRHS*SSTSLLPVSLG
Trigger: CCCCAGGGACACTGGGAGCAAGCTGGTGCTGGAGCATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR GCA 72 bp GTTGGGGTGACTCAGGTGGGGTGGGATGACGGTGTCTaGACTAGCTACTTCCACGGAGGAAAGGGAGGTCAC +
Preference number: 3 (lower is better)
Translates to: VGVTQVGWDDGV*TSYFHGGKGGH
Trigger: GTGACCTCCCTTTCCTCCGTGGAAGTAGCTAGTGCAGACACCGTCATCCCACCCCACCTGAGTCACCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 72 bp GGGAAGACTAGGCCCGGCAGGCATCAGGATCTGCCATaGTGGCTTTCACCTGCTCTTCTGAGCAGCTCCTAC +
Preference number: 3 (lower is better)
Translates to: GKTRPGRHQDLP*WLSPALLSSSY
Trigger: GTAGGAGCTGCTCAGAAGAGCAGGTGAAAGCCACCATGGCAGATCCTGATGCCTGCCGGGCCTAGTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CAA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGGCCATGTTCCCCTGGTaGCTTCCCGTGCCTTCATCT +
Preference number: 3 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGAMFPW*LPVPSS
Trigger: AGATGAAGGCACGGGAAGCAACCAGGGGAACATGGC...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR TCA 72 bp GAGGTAGGGTCAGGTAGTCCGGAGGTCTGGTGGAGGTaGGATAGCCAAGGGTCTGCCTTCAGTCATGGTGGA +
Preference number: 3 (lower is better)
Translates to: EVGSGSPEVWWR*DSQGSAFSHGG
Trigger: TCCACCATGACTGAAGGCAGACCCTTGGCTATCTCACCTCCACCAGACCTCCGGACTACCTGACCCTACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 72 bp CCAGAGTACCCAGGGGTCCAAAGCCACTTCGGTGAATaGAAATCTAAAGGTGAAGAGAGGGGAGGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: PEYPGVQSHFGE*KSKGEERGGQG
Trigger: GCCCTGGCCTCCCCTCTCTTCACCTTTAGATTTCCATTCACCGAAGTGGCTTTGGACCCCTGGGTACTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR GCA 72 bp CTGGAACCTGACTCTGCTGAAGTGGACTATAGCATCTaGCACCTAAACACAGGCAGCCTCTCTGGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: LEPDSAEVDYSI*HLNTGSLSGSC
Trigger: GCAGCTGCCAGAGAGGCTGCCTGTGTTTAGGTGGCAGATGCTATAGTCCACTTCAGCAGAGTCAGGTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CCA 72 bp ACCCCTGCTGAGCATCTCATCCCTCTGACTAGGTCATaGATGCCACAGGTAGCTCCCACCTGTGTTTCTCCT +
Preference number: 3 (lower is better)
Translates to: TPAEHLIPLTRS*MPQVAPTCVSP
Trigger: AGGAGAAACACAGGTGGGAGCTACCTGTGGCATCCATGACCTAGTCAGAGGGATGAGATGCTCAGCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CAA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGAGGGTTCCAGGGTCCTaGGAAATCAACTACTACTGG +
Preference number: 3 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGRVPGS*EINYYW
Trigger: CCAGTAGTAGTTGATTTCCAAGGACCCTGGAACCCT...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR TCA 72 bp AATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGTaGCTCAGGTGGGGTGGGATGACGGTGTCTGCACTA +
Preference number: 3 (lower is better)
Translates to: NQAEIQSPSWLG*LRWGGMTVSAL
Trigger: TAGTGCAGACACCGTCATCCCACCCCACCTGAGTCACCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CAA 90 bp AGGGCAGCCACCCAATCAGTCCCTGCACCTCTATGTGAGAAAATGGGTTCCATTGTGCCCCTTCGCTCTTaGGTAGCCGGCAATAGAACA +
Preference number: 3 (lower is better)
Translates to: RAATQSVPAPLCEKMGSIVPLRS*VAGNRT
Trigger: TGTTCTATTGCCGGCTACCAAAGAGCGAAGGGGCAC...AATGGAACCCATTTTCTCACATAGAGGTGCAGGGACTGATTGGGTGGCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR TCA 72 bp CTAGGGAAAAGGCCTGTAGATCAGAGGGGATCCTCTTaGGCAGATGGTGACCCTAAGCCTCTCAAGTGTAGG +
Preference number: 3 (lower is better)
Translates to: LGKRPVDQRGSS*ADGDPKPLKCR
Trigger: CCTACACTTGAGAGGCTTAGGGTCACCATCTGCTCAAGAGGATCCCCTCTGATCTACAGGCCTTTTCCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR GCA 72 bp TCCCCAGTAGCTGGGATTACGGGTGCACACCACCAATaGCCGGCTAATTTTTGTAGAGACAGGGTTTCACCA +
Preference number: 3 (lower is better)
Translates to: SPVAGITGAHHQ*PANFCRDRVSP
Trigger: TGGTGAAACCCTGTCTCTACAAAAATTAGCCGGGCATTGGTGGTGTGCACCCGTAATCCCAGCTACTGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CCA 72 bp AATGCTGGGCAGAAAAGGGTTACAAGGCAGGTAGTCTaGACACTGGATTCAACAGCTTGCCATCAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: NAGQKRVTRQVV*TLDSTACHQPG
Trigger: CCCTGGCTGATGGCAAGCTGTTGAATCCAGTGTCCAGACTACCTGCCTTGTAACCCTTTTCTGCCCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CAA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAGAGAAGTCTCCACATTaGAAGACCTTGTTTTCACAA +
Preference number: 3 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPEKSPH*KTLFSQ
Trigger: TTGTGAAAACAAGGTCTTCAAATGTGGAGACTTCTC...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CAA 90 bp GGAAAGGCACCCTCAGGACCAGACTGTCCAAAAGGGTTGAGGGAACAGGGGAAGTATGGCAAGAGTTTCTaGAAGCCAGATGTAGGGAAC +
Preference number: 3 (lower is better)
Translates to: GKAPSGPDCPKGLREQGKYGKSF*KPDVGN
Trigger: GTTCCCTACATCTGGCTTCAAGAAACTCTTGCCATA...CTTCCCCTGTTCCCTCAACCCTTTTGGACAGTCTGGTCCTGAGGGTGCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR CAA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGACCTTCAGCACCTCCTaGGGTAAGCCAGTCCGGGCC +
Preference number: 3 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGTFSTS*GKPVRA
Trigger: GGCCCGGACTGGCTTACCCAAGGAGGTGCTGAAGGT...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR TCA 72 bp AAATTCAACAGAGCAACGCCAATGGAACAAAATCTATaGACAGCAACACTGCCCCTCCAGCCCGGGCCTCCA +
Preference number: 3 (lower is better)
Translates to: KFNRATPMEQNL*TATLPLQPGPP
Trigger: TGGAGGCCCGGGCTGGAGGGGCAGTGTTGCTGTTCATAGATTTTGTTCCATTGGCGTTGCTCTGTTGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CAA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAACAGCTCAAGGCCATGTaGGGGCAGATGCCTTGGTCT +
Preference number: 3 (lower is better)
Translates to: QITSHGQWPLKQNMCYQEQLKAM*GQMPWS
Trigger: AGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTG...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR GCA 72 bp AAACAACAAAGGCCCAGAATTATGGGGCCAACTAGCTaGCCAGTTGCATCTTGGGGGCATCAGAGTAGACAA +
Preference number: 3 (lower is better)
Translates to: KQQRPRIMGPTS*PVASWGHQSRQ
Trigger: TTGTCTACTCTGATGCCCCCAAGATGCAACTGGGCAGCTAGTTGGCCCCATAATTCTGGGCCTTTGTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CAA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAAGTTGGGGCAGATGCCTaGGTCTTCCTTTCCAGGCTA +
Preference number: 3 (lower is better)
Translates to: QITSHGQWPLKQNMCYQEVGADA*VFLSRL
Trigger: TAGCCTGGAAAGGAAGACCAAGGCATCTGCCCCAAC...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR TCA 72 bp GGCAGATGCCTTGGTCTTCCTTTCCAGGCTAGGTTGTaGGCGTTTATATGTGCTCATGTAAATGGGGAGAAG +
Preference number: 3 (lower is better)
Translates to: GRCLGLPFQARL*AFICAHVNGEK
Trigger: CTTCTCCCCATTTACATGAGCACATATAAACGCTCACAACCTAGCCTGGAAAGGAAGACCAAGGCATCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR TCA 72 bp TCTCCTCCAGCCCTGCAAGTTCCATTTCCTAAAGCATaGACTAAGATCATCTTCCCAGAGGAGGGACTCAGT +
Preference number: 3 (lower is better)
Translates to: SPPALQVPFPKA*TKIIFPEEGLS
Trigger: ACTGAGTCCCTCCTCTGGGAAGATGATCTTAGTTCATGCTTTAGGAAATGGAACTTGCAGGGCTGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR TCA 72 bp TCACCACAAGGCCACTGTTTTGCAGGAATAAGCTGCTaGAGTTTAATGCTGCCTGAGCTGACCCTAGACTCA +
Preference number: 3 (lower is better)
Translates to: SPQGHCFAGISC*SLMLPELTLDS
Trigger: TGAGTCTAGGGTCAGCTCAGGCAGCATTAAACTTCAGCAGCTTATTCCTGCAAAACAGTGGCCTTGTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR TCA 72 bp GAGGCAAAGACCAAAATACCGACAGCAAAGAAAGCATaGGCTACCACTGGAATACAGGCACTAAGAGGGCAC +
Preference number: 3 (lower is better)
Translates to: EAKTKIPTAKKA*ATTGIQALRGH
Trigger: GTGCCCTCTTAGTGCCTGTATTCCAGTGGTAGCTCATGCTTTCTTTGCTGTCGGTATTTTGGTCTTTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR TCA 72 bp GCTGAACATACTGCATCTTTCAGCCCAATTATAATCTaGAGGGCAGCCACCCAATCAGTCCCTGCACCTCTA +
Preference number: 3 (lower is better)
Translates to: AEHTASFSPIII*RAATQSVPAPL
Trigger: TAGAGGTGCAGGGACTGATTGGGTGGCTGCCCTTCAGATTATAATTGGGCTGAAAGATGCAGTATGTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CCA 72 bp ACCCTAAGCCTCTCAAGTGTAGGGTTCCAGGGTCCTTaGAAATCAACTACTACTGGGCATTGTGCTTACTGT +
Preference number: 3 (lower is better)
Translates to: TLSLSSVGFQGP*KSTTTGHCAYC
Trigger: ACAGTAAGCACAATGCCCAGTAGTAGTTGATTTCCAAGGACCCTGGAACCCTACACTTGAGAGGCTTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CAA 90 bp AGTTTCTTGAAGCCAGATGTAGGGAACAGTCTAATGGGCCTGGAACAGAAGCAAGGAGAAGCCCAGATGTaGCTAAGAGCTACAGATGTG +
Preference number: 3 (lower is better)
Translates to: SFLKPDVGNSLMGLEQKQGEAQM*LRATDV
Trigger: CACATCTGTAGCTCTTAGCAACATCTGGGCTTCTCC...TTGCTTCTGTTCCAGGCCCATTAGACTGTTCCCTACATCTGGCTTCAAGAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR CAA 90 bp TTTCAGCCCAATTATAATCTGAAGGGCAGCCACCCAATCAGTCCCTGCACCTCTGGTATCATTACACTGTaGGCAGCTATTAAACCACGA +
Preference number: 3 (lower is better)
Translates to: FQPNYNLKGSHPISPCTSGIITL*AAIKPR
Trigger: TCGTGGTTTAATAGCTGCCAACAGTGTAATGATACC...AGAGGTGCAGGGACTGATTGGGTGGCTGCCCTTCAGATTATAATTGGGCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR CAA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGTTTTCCAGCCTTTGTTaGTGGGGTGGGATAGGATGG +
Preference number: 3 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGFSSLC*WGGIGW
Trigger: CCATCCTATCCCACCCCACAAACAAAGGCTGGAAAA...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CAA 90 bp AGTTTCTTGAAGCCAGATGTAGGGAACAGTCTAATGGGCCTGGAACAGAAGCAAAACCACGAGGAGACTTaGATTCCTAATAGTTGTGGG +
Preference number: 3 (lower is better)
Translates to: SFLKPDVGNSLMGLEQKQNHEET*IPNSCG
Trigger: CCCACAACTATTAGGAATCAAAGTCTCCTCGTGGTT...TTGCTTCTGTTCCAGGCCCATTAGACTGTTCCCTACATCTGGCTTCAAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR CAA 90 bp TTCTGTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCCCAAACCGGAGATTGTaGTTTCTCAAAAACCGCTCC +
Preference number: 3 (lower is better)
Translates to: FCLLSLHRNVPNHRQAHFPNRRL*FLKNRS
Trigger: GGAGCGGTTTTTGAGAAACAACAATCTCCGGTTTGG...GAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR GCA 72 bp AGCCACTGTATTATTAGTGGAAGAAACTCACAGACCTaGTACTGGAGAAGCCCAGATGTTGCTAAGAGCTAC +
Preference number: 3 (lower is better)
Translates to: SHCIISGRNSQT*YWRSPDVAKSY
Trigger: GTAGCTCTTAGCAACATCTGGGCTTCTCCAGTAGCAGGTCTGTGAGTTTCTTCCACTAATAATACAGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR TCA 72 bp CAGAGAAATGTTGGCTGCCTCAAAGCACAGCTCCACTaGGTACATTCTGAGACTCTAATAAGTAATGGCTTG +
Preference number: 3 (lower is better)
Translates to: QRNVGCLKAQLH*VHSETLISNGL
Trigger: CAAGCCATTACTTATTAGAGTCTCAGAATGTACTCAGTGGAGCTGTGCTTTGAGGCAGCCAACATTTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 72 bp TATATATCTGTGGCCTCAAATGAGGAAGATATCAGATaGCTAGATGACAGGACATCTCCAAGAACTGCTGGG +
Preference number: 3 (lower is better)
Translates to: YISVASNEEDIR*LDDRTSPRTAG
Trigger: CCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTCATTTGAGGCCACAGATATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 72 bp CGGAGATTGTTGTTTCTCAAAAACCGCTCCTCTGCATaGTTCCTAACTTCCTTTCCTTTAACTTGCCTCTTC +
Preference number: 3 (lower is better)
Translates to: RRLLFLKNRSSA*FLTSFPLTCLF
Trigger: GAAGAGGCAAGTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAACAATCTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR-3UTR CAA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGAACTACTACTGGGCATaGTGCTTACTGTCCCCTATT +
Preference number: 3 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGNYYWA*CLLSPI
Trigger: AATAGGGGACAGTAAGCACAATGCCCAGTAGTAGTT...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR TCA 72 bp ACTTTGATTCCTAATAGTTGTGGGAGATACCTGGCATaGAGCTACACCTTTAATGGCCAATCTCTTCCTAGG +
Preference number: 3 (lower is better)
Translates to: TLIPNSCGRYLA*SYTFNGQSLPR
Trigger: CCTAGGAAGAGATTGGCCATTAAAGGTGTAGCTTCATGCCAGGTATCTCCCACAACTATTAGGAATCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR GCA 72 bp AAGAGACTCAAGAAATCACCATTTCATTTCATAGGGTaGCCTCTTACCCTTCTAAGCGTGTGGTTCTTTGAC +
Preference number: 3 (lower is better)
Translates to: KRLKKSPFHFIG*PLTLLSVWFFD
Trigger: GTCAAAGAACCACACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 72 bp GGAAGACTGAAATTAAATTCAACAGAGCAACGCCAATaGAACAAAATCTATGAACAGCAACACTGCCCCTCC +
Preference number: 3 (lower is better)
Translates to: GRLKLNSTEQRQ*NKIYEQQHCPS
Trigger: GGAGGGGCAGTGTTGCTGTTCATAGATTTTGTTCCATTGGCGTTGCTCTGTTGAATTTAATTTCAGTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR-3UTR CAA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACATGAAATTTAGCCCTTaGTTCTACCAGAGACCCAAC +
Preference number: 3 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNMKFSP*FYQRPN
Trigger: GTTGGGTCTCTGGTAGAACAAAGGGCTAAATTTCAT...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CCA 72 bp AGAGGAAAAGAGAAAGCGGCCAAACAATGGTTTGGTTaGGCTGTGTTTCAGAGTATACCACCCTTTAAAATT +
Preference number: 3 (lower is better)
Translates to: RGKEKAAKQWFG*AVFQSIPPFKI
Trigger: AATTTTAAAGGGTGGTATACTCTGAAACACAGCCCAACCAAACCATTGTTTGGCCGCTTTCTCTTTTCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CCA 72 bp TCTAATTACAGAGAAATCAATTTATACTGCATCTGCTaGGATCAGCTGAAAGCACAGGATGAGCAGAGCACA +
Preference number: 3 (lower is better)
Translates to: SNYREINLYCIC*DQLKAQDEQST
Trigger: TGTGCTCTGCTCATCCTGTGCTTTCAGCTGATCCCAGCAGATGCAGTATAAATTGATTTCTCTGTAATTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR GCA 72 bp ATATTCAAATCTTCCTCATTGGCTAGTAGTCAACACTaGTACTCTGCACCACAGAATTCAGTCAAGAAACTT +
Preference number: 3 (lower is better)
Translates to: IFKSSSLASSQH*YSAPQNSVKKL
Trigger: AAGTTTCTTGACTGAATTCTGTGGTGCAGAGTAGCAGTGTTGACTACTAGCCAATGAGGAAGATTTGAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR TCA 72 bp CACTTACATATGGAAATAGGTATTCCCTGCTGCAGCTaGTCTAATTACAGAGAAATCAATTTATACTGCATC +
Preference number: 3 (lower is better)
Translates to: HLHMEIGIPCCS*SNYREINLYCI
Trigger: GATGCAGTATAAATTGATTTCTCTGTAATTAGATCAGCTGCAGCAGGGAATACCTATTTCCATATGTAAGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR GCA 72 bp TATTGTTTATCAACTATTATGAGTCTGATGATGAAATaGCAGTCAAGCTGGGAAACAAATAAAGGTCTGATG +
Preference number: 3 (lower is better)
Translates to: YCLSTIMSLMMK*QSSWETNKGLM
Trigger: CATCAGACCTTTATTTGTTTCCCAGCTTGACTGGCATTTCATCATCAGACTCATAATAGTTGATAAACAATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGTTGCTCCCCCGACGCTaGTACAGCTGCCACCACCCC +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWALLPRR*YSCHHP
Trigger: GGGGTGGTGGCAGCTGTAGCAGCGTCGGGGGAGCAA...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGCCCCCTCACTTGGAGTaGACAGGGAAGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWAPPHLE*TGKSLE
Trigger: CTCCAGGGACTTCCCTGTTCACTCCAAGTGAGGGGG...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGCTAGCCAGTCGGCTTTaGTGGGGGTCTGATGAGCCA +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWALASRL*WGSDEP
Trigger: TGGCTCATCAGACCCCCACCAAAGCCGACTGGCTAG...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGGAGGCCATGTTCCCCTaGTTGCTTCCCGTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWAEAMFP*LLPVPS
Trigger: TGAAGGCACGGGAAGCAACCAGGGGAACATGGCCTC...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGGGAGTCACAGAACCTTaGGGGTGCCCAATCATGTCG +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWAGVTEP*GCPIMS
Trigger: CGACATGATTGGGCACCCCCAAGGTTCTGTGACTCC...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAGCTTCCACTCTTCCTTaGGTGCTGCCTCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPASTLP*VLPPAP
Trigger: AGGAGCGGGAGGCAGCACTCAAGGAAGAGTGGAAGC...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGTGCCCCGACGGCCTTTaGTATTGGCTCCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQCPDGL*YWLLPG
Trigger: CCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCA...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGGAACAGGGAAGTCCCTaGAGTGGGTTTGCTAGTGTC +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWAEQGSP*SGFASV
Trigger: GACACTAGCAAACCCACTCCAGGGACTTCCCTGTTC...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGCAGGATCTGCCATGGTaGCTTTCACCTGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWAQDLPW*LSPALL
Trigger: CAGAAGAGCAGGTGAAAGCCACCATGGCAGATCCTG...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGTGTGTTGACCCCAACTaGTCGGGTACGAACCATGAT +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWACVDPN*SGTNHD
Trigger: ATCATGGTTCGTACCCGATCAGTTGGGGTCAACACA...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAAAGGGGGCCAGTGGCTaGGCCCATGGAATTAGTACG +
Preference number: 4 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPKGASG*AHGIST
Trigger: CGTACTAATTCCATGGGCTCAGCCACTGGCCCCCTT...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGGCAGCTCCCAAGATCTaGATGGAGAATAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWAAAPKI*MENRFL
Trigger: GAGGAACCTATTCTCCATGCAGATCTTGGGAGCTGC...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGCTGGCTCTCCACTCCTaGCTGGCTGCTGGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLLALHS*LAAGVQ
Trigger: CTGAACCCCAGCAGCCAGGCAGGAGTGGAGAGCCAG...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGCACCACCTGAGACCTTaGTGCCATATGGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWAHHLRP*CHMGKK
Trigger: CTTTTTCCCCATATGGCAGCAAGGTCTCAGGTGGTG...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAATGGGGCCAACTAGCTaGCCAGTTGCATCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPMGPTS*PVASWG
Trigger: CCCCCAAGATGCAACTGGGCAGCTAGTTGGCCCCAT...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGCTGGATTCAACAGCTTaGCATCAGCCAGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWALDSTA*HQPGKV
Trigger: CACTTTCCCTGGCTGATGGCAAGCTGTTGAATCCAG...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAGACGGCCTTTGCTATTaGCTCCTGCCCGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPDGLCY*LLPGFC
Trigger: GCAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTC...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGGAGGACACAGGCACATaGACACTTGGCCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLEDTGT*TLGRGS
Trigger: GGAGCCCCGGCCAAGTGTCCATGTGCCTGTGTCCTC...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGCTGTGGCTGTCTCATTaGCAGGTGTATTACTGTTGG +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWALWLSH*QVYYCW
Trigger: CCAACAGTAATACACCTGTCAATGAGACAGCCACAG...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp ATGGCTGCTGTGCTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCAGAGGGGATCCTCTTaGGCAGATGGTGACCCTAAG +
Preference number: 4 (lower is better)
Translates to: MAAVLSSDLTQCLGVGVPQRGSS*ADGDPK
Trigger: CTTAGGGTCACCATCTGCTCAAGAGGATCCCCTCTG...AGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAGCACAGCAGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGGAAGATCAGGAGAGCTaGGGGAGAACAGGAAAATTG +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWAEDQES*GRTGKL
Trigger: CAATTTTCCTGTTCTCCCTCAGCTCTCCTGATCTTC...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCACTGCCCGGGTTTTGCTaGTGTTACTGGTCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPLPGFC*CYWSLC
Trigger: GCAAAGGGACCAGTAACAGCAGCAAAACCCGGGCAG...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGCATCCTCAGAAGTGCTaGTGGCAGGTGGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLHPQKC*WQVGGA
Trigger: AGCACCGCCCACCTGCCAGCAGCACTTCTGAGGATG...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGAATATGGTGAGTCTTTaGTCTGAGGCTGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWANMVSL*SEAEGE
Trigger: TTCCCCCTCAGCCTCAGAGCAAAGACTCACCATATT...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGTCCACTCCCCGCTGCTaGTGCTCTAAGCTCTGGCGT +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQSTPRC*CSKLWR
Trigger: ACGCCAGAGCTTAGAGCAGCAGCAGCGGGGAGTGGA...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGTATGCTGCAGGCCAGTaGCACAGATACAAAACACAC +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWAYAAGQ*HRYKTH
Trigger: GTGTGTTTTGTATCTGTGGCACTGGCCTGCAGCATA...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGTATGAACAGCAACACTaGCCCTCCAGCCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLYEQQH*PSSPGL
Trigger: GAGGCCCGGGCTGGAGGGGCAGTGTTGCTGTTCATA...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGTCCTCCCAAGGGAACTaGCTGGAGGACCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGSSQGN*LEDPRI
Trigger: GATCCTGGGGTCCTCCAGCCAGTTCCCTTGGGAGGA...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAGGTGTAGATTTGCTGTaGGGGGATGGCAGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPGVDLL*GDGRGN
Trigger: ATTGCCCCTGCCATCCCCCCACAGCAAATCTACACC...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAGCCAGTCGGCTTTGGTaGGGGTCTGATGAGCCATTT +
Preference number: 4 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPASRLW*GSDEPF
Trigger: AAATGGCTCATCAGACCCCCACCAAAGCCGACTGGC...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGGACCTTGCTGCCATATaGGGAAAAAGAGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWADLAAI*GKRVAG
Trigger: TCCAGCTACTCTTTTTCCCCATATGGCAGCAAGGTC...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGGAGGCAAGACCAGTGTaGGGATCCCCCTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQEARPV*GSPWER
Trigger: CCTTTCCCAGGGGGATCCCCACACTGGTCTTGCCTC...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp ATGGCTGCTGTGCTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTATGTCTGTGAGGGCCTaGGCAGGGGTGGCTCATAAA +
Preference number: 4 (lower is better)
Translates to: MAAVLSSDLTQCLGVGVPMSVRA*AGVAHK
Trigger: TTTATGAGCCACCCCTGCCCAGGCCCTCACAGACAT...AGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAGCACAGCAGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGGCACTTCCATCATACTaGCCACCCCGTCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLALPSY*PPRPPK
Trigger: CTTGGGAGGACGGGGTGGTCAGTATGATGGAAGTGC...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGTGGGACGCTGCTGGATaGCCGAGGGCTGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMWDAAG*PRAADW
Trigger: CCAGTCAGCAGCCCTCGGTCATCCAGCAGCGTCCCA...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGACTCCCCGCTGCTGCTaGTCTAAGCTCTGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLTPRCC*SKLWRF
Trigger: GAAACGCCAGAGCTTAGAGCAGCAGCAGCGGGGAGT...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGCTTCAGGCCCATCTCTaGCTTCTTGTCCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLLQAHL*LLVHSP
Trigger: CGGGGAGTGGACAAGAAGGCAGAGATGGGCCTGAAG...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTCGACGCTGCTACAGCTaGCACCACCCCCAACCACCC +
Preference number: 4 (lower is better)
Translates to: VASRAFISTEATIVITVARRCYS*HHPQPP
Trigger: GGGTGGTTGGGGGTGGTGGCAGCTGTAGCAGCGTCG...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGGGAACCCCTGCCCCCTaGCTCACAGGCAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMGTPAP*LTGSSR
Trigger: CCTTGAGCTGCCTGTGAGGCAGGGGGCAGGGGTTCC...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCGCTCCAGCACCAGCTTaGTCCCAGTGTCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIAPAPA*SQCPWG
Trigger: TCCCCAGGGACACTGGGAGCAAGCTGGTGCTGGAGC...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGAGCTGCCCCCTCACTTaGAGTGAACAGGGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLSCPLT*SEQGSP
Trigger: GGGACTTCCCTGTTCACTCCAAGTGAGGGGGCAGCT...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGCCCAAGGGAACTGGCTaGAGGACCCCAGGATCCTTT +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLPKGTG*RTPGSF
Trigger: AAAGGATCCTGGGGTCCTCCAGCCAGTTCCCTTGGG...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGACTCAGCACCTGTCTTaGCCTCAGAGGCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLTQHLS*PQRPPC
Trigger: GCAAGGAGGCCTCTGAGGCCAAGACAGGTGCTGAGT...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGGCCCTGTGCTGGTGTTaGAACCCCTGCCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMALCWC*NPCPLP
Trigger: AGGCAGGGGGCAGGGGTTCCAACACCAGCACAGGGC...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGGTGACTCAGGTGGGGTaGGATGACGGTGTCTGCACT +
Preference number: 4 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGVTQVG*DDGVCT
Trigger: AGTGCAGACACCGTCATCCCACCCCACCTGAGTCAC...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGAGTCACCCTCTTGGTTaGGGTGACTCAGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLSHPLG*GDSGGV
Trigger: CACCCCACCTGAGTCACCCCAACCAAGAGGGTGACT...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGAGGTGGGCGGTGCTCTaGAGAATTCTGGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMRWAVL*RILAAP
Trigger: CGGGGCAGCCAGAATTCTTCAGAGCACCGCCCACCT...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTCCCTCTTGGTTGGGGTaGCTCAGGTGGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: VASRAFISTEATIVITVAPSWLG*LRWGGM
Trigger: CATCCCACCCCACCTGAGTCACCCCAACCAAGAGGG...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGCTCCTGCCCGGGTTTTaGTGCTGTTACTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGLLPGF*CCYWSL
Trigger: AAGGGACCAGTAACAGCAGCAAAACCCGGGCAGGAG...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCGTTGGGCATGGCTTGTaGCACTGTGGCGGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIVGHGL*HCGGQA
Trigger: GGCTTGACCGCCACAGTGGCACAAGCCATGCCCAAC...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGCCATGTTCCCCTGGTTaGTTCCCGTGCCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQPCSPG*FPCLHL
Trigger: GAGATGAAGGCACGGGAAGCAACCAGGGGAACATGG...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAAGTTCCTCCACATGCTaGCAATTCCCAGGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPSSSTC*QFPGCK
Trigger: TTTGCACCCTGGGAATTGGCAGCATGTGGAGGAACT...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTTGGTGTTGGAACCCCTaGCCCCTGCCTCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: VASRAFISTEATIVITVAWCWNP*PLPHRQ
Trigger: CTGCCTGTGAGGCAGGGGGCAGGGGTTCCAACACCA...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ATGGCTGCTGTGCTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCAGAGAAATGTTGGCTaGCTCAAAGCACAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: MAAVLSSDLTQCLGVGVPQRNVG*LKAQLH
Trigger: GTGGAGCTGTGCTTTGAGGCAGCCAACATTTCTCTG...AGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAGCACAGCAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCACAGGTGTATTACTGTTaGGACGCATGCGTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPQVYYC*DACVCL
Trigger: GAGGCAAACGCATGCGTCCCAACAGTAATACACCTG...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTGGGGACTGTTGGGCATaGCTTGTGCCACTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: VASRAFISTEATIVITVAGDCWA*LVPLWR
Trigger: CCGCCACAGTGGCACAAGCCATGCCCAACAGTCCCC...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGGAGACTCCTCTGACGTaGGCAGCTTGCAGTCACTAC +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQETPLT*AACSHY
Trigger: GTAGTGACTGCAAGCTGCCCACGTCAGAGGAGTCTC...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGTACCCCAAGTGGTGGTaGTGGTGGTGTGTGGACATC +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQYPKWW*WWCVDI
Trigger: GATGTCCACACACCACCACCACCACCACTTGGGGTA...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGAACTTTGGGGGTAGCTaGGCGGGCAGGGGACAAGGA +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMNFGGS*AGRGQG
Trigger: TCCTTGTCCCCTGCCCGCTCAGCTACCCCCAAAGTT...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCTGTGGCGGTCAAGCCTaGGGAAGAGCCTGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: WLINRLGLVVLALGSKFFCGGQA*GRAWAR
Trigger: GCGAGCCCAGGCTCTTCCTCAGGCTTGACCGCCACA...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCACAGTGGGCTTGGGCTaGATGGGCTTGAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRITVGLG*MGLSWG
Trigger: TCCCCAACTCAAGCCCATTCAGCCCAAGCCCACTGT...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGCGGCGTCCTTTGATTTaGCACTGTCTACCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQRRPLI*HCLPCP
Trigger: AGGGCAAGGTAGACAGTGTCAAATCAAAGGACGCCG...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTGGCTGGGGGCCTTGGTaGGAGTTGGTGGAATTGACG +
Preference number: 4 (lower is better)
Translates to: VASRAFISTEATIVITVAGWGPW*ELVELT
Trigger: CGTCAATTCCACCAACTCTCACCAAGGCCCCCAGCC...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCGGCCTTGCCAGGTCCTaGTTTCACCAGGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIGLARS*FHQVCQ
Trigger: CTGACAGACCTGGTGAAATCAGGACCTGGCAAGGCC...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGGTGGCTTCTCTGGGCTaGGGCCATGTTCCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMVASLG*GHVPLV
Trigger: AACCAGGGGAACATGGCCTCAGCCCAGAGAAGCCAC...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp ATGGCTGCTGTGCTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTACTAGTTTATCTGCCTaGGGCTTAAGAGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: MAAVLSSDLTQCLGVGVPTSLSA*GLRAKQ
Trigger: CTGCTTGGCTCTTAAGCCTCAGGCAGATAAACTAGT...AGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAGCACAGCAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGTGTCTCAACCGGGTTTaGATCCACTCCTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQCLNRV*IHSFPS
Trigger: GGAGGGAAAGGAGTGGATGCAAACCCGGTTGAGACA...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGCTGAAGAATTCTGGCTaGCCCGACGGCCTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLLKNSG*PDGLCY
Trigger: ATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAG...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCCTGGCAGGTGGGCGGTaGTCTGAAGAATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRILAGGR*SEEFWL
Trigger: CAGCCAGAATTCTTCAGAGCACCGCCCACCTGCCAG...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCCCGTTCACCCCCACTTaGTCCCCCGACGCTGCTACA +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCPFTPT*SPDAAT
Trigger: TGTAGCAGCGTCGGGGGAGCAAGTGGGGGTGAACGG...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGCACAGACGTCATTCATaGTCCAGCACCAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQHRRHS*SSTSLL
Trigger: GAGCAAGCTGGTGCTGGAGCATGAATGACGTCTGTG...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGTGGGATGACGGTGTCTaGACTAGCTACTTCCACGGA +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQWDDGV*TSYFHG
Trigger: TCCGTGGAAGTAGCTAGTGCAGACACCGTCATCCCA...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ATGGCTGCTGTGCTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTTGGAGAACCCAAGGCTaGCCAGCTAATACAGAAGTT +
Preference number: 4 (lower is better)
Translates to: MAAVLSSDLTQCLGVGVPWRTQG*PANTEV
Trigger: AACTTCTGTATTAGCTGGGCAGCCTTGGGTTCTCCA...AGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAGCACAGCAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGCAGCTCTCCAAGCCTTaGCTGATCTATCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLQLSKP*LIYLGM
Trigger: CATCCCCAGATAGATCAGGCAAGGCTTGGAGAGCTG...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGTCAGACCTGCCACATTaGTCAGTACATGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLSDLPH*SVHAQW
Trigger: CCACTGGGCATGTACTGACCAATGTGGCAGGTCTGA...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGCTTCCCTTGAGGACCTaGCACTGGGGTCACAAACTT +
Preference number: 4 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGLPLRT*HWGHKL
Trigger: AAGTTTGTGACCCCAGTGCCAGGTCCTCAAGGGAAG...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GGAAAGGCACCCTCAGGACCAGACTGTCCAAAAGGGTTGAGGGAACAGGGGAAGGAACAGGGAAGTCCCTaGAGTGGGTTTGCTAGTGTC +
Preference number: 4 (lower is better)
Translates to: GKAPSGPDCPKGLREQGKEQGSP*SGFASV
Trigger: GACACTAGCAAACCCACTCCAGGGACTTCCCTGTTC...CTTCCCCTGTTCCCTCAACCCTTTTGGACAGTCTGGTCCTGAGGGTGCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGGGATGGCAGGGGCAATaGGACGGGCTGACTTTAGGC +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMGWQGQ*DGLTLG
Trigger: GCCTAAAGTCAGCCCGTCCCATTGCCCCTGCCATCC...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCCTCTCCACTCCTGCCTaGCTGCTGGGGTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCLSTPA*LLGFRA
Trigger: GGCTCTGAACCCCAGCAGCCAGGCAGGAGTGGAGAG...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGGGTGGTGGTGGTGTGTaGACATCAGGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMGGGGV*TSGAGK
Trigger: CTTCCCAGCGCCTGATGTCCACACACCACCACCACC...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCTGGGGAGCCCTGTGCTaGTGTTGGAACCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: WLINRLGLVVLALGSKFFWGALC*CWNPCP
Trigger: GGGGCAGGGGTTCCAACACCAGCACAGGGCTCCCCA...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGACAGAGCAACGCCAATaGAACAAAATCTATGAACAG +
Preference number: 4 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWATEQRQ*NKIYEQ
Trigger: CTGTTCATAGATTTTGTTCCATTGGCGTTGCTCTGT...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGCTGGGGTCACAAACTTaGTGTTGTCTGGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGLGSQT*CCLVVW
Trigger: CCACACTACCAGACAACATCAAGTTTGTGACCCCAG...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp CACCTGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTTGGCAGCTTGCCTTCCTTCCCTTaGGGACCTGGCACTGGGGTC +
Preference number: 4 (lower is better)
Translates to: HLSFQVKQKARYHYTVGSLPSFP*GPGTGV
Trigger: GACCCCAGTGCCAGGTCCTCAAGGGAAGGAAGGCAA...GCTGCCAACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCACCATCTTTTCAGACTTaGCTTTCTTTAGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPPSFQT*LSLAGD
Trigger: GTCGCCTGCTAAAGAAAGTCAAGTCTGAAAAGATGG...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp ATGGCTGCTGTGCTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTATTCAGCTCCATGTCTaGAAGGGGTTTGTTTTTCCG +
Preference number: 4 (lower is better)
Translates to: MAAVLSSDLTQCLGVGVPIQLHV*KGFVFP
Trigger: CGGAAAAACAAACCCCTTTCAGACATGGAGCTGAAT...AGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAGCACAGCAGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGTGTGCTGAATTTGCTTaGAGGAGAAGGGCTATGGGG +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLCAEFA*RRRAMG
Trigger: CCCCATAGCCCTTCTCCTTCAAGCAAATTCAGCACA...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGCTCCTGAAGATTCCCTaGATGGGCTTTTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGLLKIP*MGFCLP
Trigger: AGGAAGGCAAAAGCCCATTCAGGGAATCTTCAGGAG...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGGAGAGTTGGTGGAATTaGCGGCTTTTGCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLESWWN*RLLLPL
Trigger: GAGTGGAAGCAAAAGCCGTCAATTCCACCAACTCTC...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCTCCCAATGGGAGGGCTaGGCACCAAGGCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: WLINRLGLVVLALGSKFFSQWEG*APRQAG
Trigger: ACCCGCTTGCCTTGGTGCTCAGCCCTCCCATTGGGA...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ATGGCTGCTGTGCTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCTATGTTCTCAGACCTaGCACATTGGTCAGTACATG +
Preference number: 4 (lower is better)
Translates to: MAAVLSSDLTQCLGVGVPLCSQT*HIGQYM
Trigger: CATGTACTGACCAATGTGGCAGGTCTGAGAACATAG...AGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAGCACAGCAGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGCTCTTTCTTGCTAGCTaGCCCCTCACTTGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQLFLAS*PLTWSE
Trigger: TTCACTCCAAGTGAGGGGGCAGCTAGCAAGAAAGAG...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGTCCTGTATCCACCCCTaGACTTCCATCATACTGACC +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLSCIHP*TSIILT
Trigger: GGTCAGTATGATGGAAGTGCAGGGGTGGATACAGGA...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GGAAAGGCACCCTCAGGACCAGACTGTCCAAAAGGGTTGAGGGAACAGGGGAAGTCCTGTATCCACCCCTaGACTTCCATCATACTGACC +
Preference number: 4 (lower is better)
Translates to: GKAPSGPDCPKGLREQGKSCIHP*TSIILT
Trigger: GGTCAGTATGATGGAAGTGCAGGGGTGGATACAGGA...CTTCCCCTGTTCCCTCAACCCTTTTGGACAGTCTGGTCCTGAGGGTGCCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGAAGCTCTGGCGTTTCTaGTGTTCTTCGTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQKLWRF*CSSYCC
Trigger: GCAGCAGTACGAAGAACAGCAGAAACGCCAGAGCTT...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGCCACTCTTCCTTGAGTaGTGCCTCCCGCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMPLFLE*CLPLLQ
Trigger: CTGAAGGAGCGGGAGGCAGCACTCAAGGAAGAGTGG...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGTCATCACAGCAGGCATaGTCCGGTAGCTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMSSQQA*SGSWGG
Trigger: ACCACCCCAGCTACCGGAGCATGCCTGCTGTGATGA...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGCCTGGTTGCTTCCCGTaGCTTCATCTCCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMPGCFP*LHLHRG
Trigger: GCCTCTGTGGAGATGAAGGCACGGGAAGCAACCAGG...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCGCAGGCATCAGGATCTaGCATGGTGGCTTTCACCTG +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIAGIRI*HGGFHL
Trigger: CAGGTGAAAGCCACCATGGCAGATCCTGATGCCTGC...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGATTCTCCCCTTCCTCTaGCTCCGGTTTAGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQILPFL*LRFSSQ
Trigger: TTGGGAACTAAACCGGAGCCAGAGGAAGGGGAGAAT...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAGTCATTGTTGACCACTaGCACCAAAAGGTGTATTGG +
Preference number: 4 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPVIVDH*HQKVYW
Trigger: CCAATACACCTTTTGGTGCCAGTGGTCAACAATGAC...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGCTCCCAAGATCTGCATaGAGAATAGGTTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGLPRSA*RIGSSP
Trigger: CGGAGAGGAACCTATTCTCCATGCAGATCTTGGGAG...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGGAAGGAGAAGGGCTATaGGGCTCTACAAGTCGAACT +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLEGEGL*GSTSRT
Trigger: AGTTCGACTTGTAGAGCCCCATAGCCCTTCTCCTTC...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGCATCAGAGCCATCATTaGATAAGGCCCCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQHQSHH*IRPQGL
Trigger: CAGACCTTGGGGCCTTATCCAATGATGGCTCTGATG...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTCAGAGCCCCAGGGCTaGACTGTGCATAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRISEPQG*TVHNLE
Trigger: CTCCAAGTTATGCACAGTCCAGCCCTGGGGCTCTGA...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGCCTTGCTTAGGTGGCTaGCATCACTCAGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGPCLGG*HHSASL
Trigger: AAGTGAAGCTGAGTGATGCCAGCCACCTAAGCAAGG...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGAGGCAGGTAGGAACCTaGGTAGTTCTGCATCATCAC +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLRQVGT*VVLHHH
Trigger: GTGATGATGCAGAACTACCCAGGTTCCTACCTGCCT...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGGAGTACCCCAAGTGGTaGTGGTGGTGGTGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMEYPKW*WWWCVD
Trigger: GTCCACACACCACCACCACCACCACTTGGGGTACTC...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGGGAGTTGAGCCTTGTTaGCTGGCAACAATGGCTGTA +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLGVEPC*LATMAV
Trigger: TACAGCCATTGTTGCCAGCCAACAAGGCTCAACTCC...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGCTTTATCCGGGCACTTaGTGTCATTCTCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLLYPGT*CHSHLL
Trigger: CAGGAGGTGAGAATGACACCAAGTGCCCGGATAAAG...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGGTCTGCCTTCAGTCATaGTGGAAACGGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQVCLQS*WKRQTG
Trigger: TCCTGTTTGCCGTTTCCACCATGACTGAAGGCAGAC...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCAGCAGACCAAGGGCTTaGGGAACAGAGCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRISRPRA*GTEQWL
Trigger: AAGCCACTGCTCTGTTCCCCAAGCCCTTGGTCTGCT...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGTGCCCTAAGGTGACCTaGCAGACTCCAAGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMCPKVT*QTPRFP
Trigger: GGGGAACCTTGGAGTCTGCCAGGTCACCTTAGGGCA...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGACAAATAACCTCCCATaGCCAGTGGCCCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLTNNLP*PVAPQT
Trigger: TGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTGT...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGATGGTAGGAGATCACTaGAAAGCTTCCTGGGATGCC +
Preference number: 4 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGMVGDH*KASWDA
Trigger: GGCATCCCAGGAAGCTTTCCAGTGATCTCCTACCAT...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGGGCAGCCACCCAATCAGTCCCTGCACCTCTATGTGAGAAAATGGGTTCCATTCTGACTGGCAGTCAGTaGGCAGCCATATCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RAATQSVPAPLCEKMGSILTGSQ*AAISGH
Trigger: GTGGCCAGATATGGCTGCCCACTGACTGCCAGTCAG...AATGGAACCCATTTTCTCACATAGAGGTGCAGGGACTGATTGGGTGGCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CAA 72 bp TCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTaGGTCTTCCTTTCCAGGCTAGGTTGTGAGCGTTTA +
Preference number: 4 (lower is better)
Translates to: SQAAQGHVGADA*VFLSRLGCERL
Trigger: TAAACGCTCACAACCTAGCCTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCCTGTGCTGGGAGCAATaGGTACCCCAAGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCLCWEQ*VPQVVV
Trigger: CACCACCACTTGGGGTACTCATTGCTCCCAGCACAG...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GGAGCCCCAGGAGGGCATAATCAGGCTGAAATTCAGTCACCCTCTTGGTTGGGGGGGAGAACAGAGGGATaGTACCTCAAAAGCCAAGTA +
Preference number: 4 (lower is better)
Translates to: GAPGGHNQAEIQSPSWLGGRTEG*YLKSQV
Trigger: TACTTGGCTTTTGAGGTATCATCCCTCTGTTCTCCC...CCCCAACCAAGAGGGTGACTGAATTTCAGCCTGATTATGCCCTCCTGGGGCTCC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GGAAAGGCACCCTCAGGACCAGACTGTCCAAAAGGGTTGAGGGAACAGGGGAAGAGTTCTTCCTCTTCATaGCAGTTCCCAGTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GKAPSGPDCPKGLREQGKSSSSS*QFPVER
Trigger: CCTCTCAACTGGGAACTGTCATGAAGAGGAAGAACT...CTTCCCCTGTTCCCTCAACCCTTTTGGACAGTCTGGTCCTGAGGGTGCCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCTGGGACGCATGCGTTTaGCTCTACCCCGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: WLINRLGLVVLALGSKFFWDACV*LYPGHC
Trigger: GCAATGGCCGGGGTAGAGGCAAACGCATGCGTCCCA...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGGCTTTTGCCTTCCTCTaGTCGACACACCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMAFAFL*STHLPR
Trigger: CCTGGGAAGGTGTGTCGAGCAGAGGAAGGCAAAAGC...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGCTGGCTCCTTGGCCTTaGCAGGTCCTGATTTCACCA +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMLAPWP*QVLISP
Trigger: TGGTGAAATCAGGACCTGGCAAGGCCAAGGAGCCAG...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCCCTCAGAGGCCTCCTTaGTTAGGTGGCTGGCATCAC +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCPQRPP*LGGWHH
Trigger: GTGATGCCAGCCACCTAAGCAAGGAGGCCTCTGAGG...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGGGGGTATGGCTGCTGTaGTGTCTTCAGACCTTACCC +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMGVWLL*CLQTLP
Trigger: GGGTAAGGTCTGAAGACAGCACAGCAGCCATACCCC...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCGGTGCTCCCAGGGGCTaGCTTCTGGGCCTTGCCCTA +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGGAPRG*LLGLAL
Trigger: TAGGGCAAGGCCCAGAAGGCAGCCCCTGGGAGCACC...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTGGAAAGGGCAGGAATaGAGGGCCATGCCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCWKGQE*RAMPAQ
Trigger: TTGGGCAGGCATGGCCCTGCATTCCTGCCCTTTCCA...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGTGTTGTCTGGTAGTGTaGCCACAGCATTGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMCCLVV*PQHWEP
Trigger: CGGCTCCCAATGCTGTGGCCACACTACCAGACAACA...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTGCAGGCACCTGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTAGCTGCCCCCTCACTTaGAGTGAACAGGGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LQAPVLPSQAEGKVSLHCSCPLT*SEQGSP
Trigger: GGGACTTCCCTGTTCACTCCAAGTGAGGGGGCAGCT...ACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACAGGTGCCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGGCAGCACTGCTGGTGTaGAAACAGGGGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMAALLV*KQGTPS
Trigger: AGATGGAGTCCCCTGTTTCCACACCAGCAGTGCTGC...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGTGCTCTGAAGAATTCTaGCTGCCCCGACGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMCSEEF*LPRRPL
Trigger: CAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCA...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGGCCTCCTTGCTTAGGTaGCTGGCATCACTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMASLLR*LASLSF
Trigger: GAAGCTGAGTGATGCCAGCCACCTAAGCAAGGAGGC...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCCTGGTGCTGGGTAAGTaGGGAGGACACAGGCACATG +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCLVLGK*GGHRHM
Trigger: CATGTGCCTGTGTCCTCCCCACTTACCCAGCACCAG...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGAAGTCACACTGGGGCTaGCTCGTGCCTTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMKSHWG*LVPCQH
Trigger: ATGCTGACAAGGCACGAGCCAGCCCCAGTGTGACTT...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGTGCTCTTGTAGTGACTaGCATGCTGCTGCAAGATGT +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQCSCSD*HAAARC
Trigger: ACATCTTGCAGCAGCATGCCAGTCACTACAAGAGCA...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGCCTCTGACTAGGTCATaGATGCCACAGGTAGCTCCC +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMPLTRS*MPQVAP
Trigger: GGGAGCTACCTGTGGCATCCATGACCTAGTCAGAGG...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCGGGCCTGGGCAGGGGTaGCTCATAAACAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: WLINRLGLVVLALGSKFFGPGQG*LINRLG
Trigger: ACCAAGCCTGTTTATGAGCCACCCCTGCCCAGGCCC...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGACAAGGCAGGTAGTCTaGACACTGGATTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQTRQVV*TLDSTA
Trigger: AGCTGTTGAATCCAGTGTCCAGACTACCTGCCTTGT...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGGTCTGATGCCAATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGCAGGGCAGTTCTGACTaGCAGTCAGTGGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RSDANLYQQVSEVGKDKVQGSSD*QSVGSH
Trigger: ATGGCTGCCCACTGACTGCCAGTCAGAACTGCCCTG...CACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGATTGGCATCAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp GGAAAGGCACCCTCAGGACCAGACTGTCCAAAAGGGTTGAGGGAACAGGGGAAGCTTCTTGCTCTTAGATaGGCTGTTCTCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GKAPSGPDCPKGLREQGKLLALR*AVLLLL
Trigger: AAGGAGAAGGAGAACAGCTCATCTAAGAGCAAGAAG...CTTCCCCTGTTCCCTCAACCCTTTTGGACAGTCTGGTCCTGAGGGTGCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCGCCTTGGTAATATGGTaGGTCTTTGCTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIALVIW*VFALRL
Trigger: CAGCCTCAGAGCAAAGACTCACCATATTACCAAGGC...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCGCTCATCCTCTGACTTaGTGTCTGAGTACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIAHPLT*CLSTWQ
Trigger: CTGCCAAGTACTCAGACATCAAGTCAGAGGATGAGC...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGTTCCAGGCTAGGTTGTaGGCGTTTATATGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQFQARL*AFICAH
Trigger: ATGAGCACATATAAACGCTCACAACCTAGCCTGGAA...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGGGCAGGAAAAGGGGATaGAGGGAACTGCCATACCTT +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMGRKRG*RELPYL
Trigger: AAGGTATGGCAGTTCCCTTCATCCCCTTTTCCTGCC...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGTTTCCTCCTTCAATTTaGGGTCCCGCTCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMFPPSI*GPAPPS
Trigger: GGAAGGAGGAGCGGGACCGCAAATTGAAGGAGGAAA...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAATTGGCCGGGGCTCCTTaGTCCCAAGGCGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: QITSHGQWPLKQNMCYQELAGAP*SQGETP
Trigger: AGGAGTCTCGCCTTGGGAGCAAGGAGCCCCGGCCAA...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGGCTGGGAAGGAGAGGTaGGGGGCCGGTCAACACTCC +
Preference number: 4 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGAGKER*GAGQHS
Trigger: GGAGTGTTGACCGGCCCCGCACCTCTCCTTCCCAGC...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGTCTAGTTCCTCCACATaGTGCCAATTCCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMSSSST*CQFPGC
Trigger: GCACCCTGGGAATTGGCAGCATGTGGAGGAACTAGA...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGAATATATACAGAGTATaGTGCAGGCCAGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQNIYRV*CRPVPQ
Trigger: CTGTGGCACTGGCCTGCAGCATACTCTGTATATATT...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCTCAGAACCCCTCCTGGGGCTaGAGGCACCTGTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VCYPYIETSQTTGKPISQNPSWG*RHLSFQ
Trigger: TTGGAAGGACAGGTGCCTGCAGCCCCAGGAGGGGTT...CTGAGAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp GGAAAGGCACCCTCAGGACCAGACTGTCCAAAAGGGTTGAGGGAACAGGGGAAGCAAAAACCGCTCCTCTaGATGGTTCCTAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: GKAPSGPDCPKGLREQGKQKPLL*MVPNFL
Trigger: AAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTG...CTTCCCCTGTTCCCTCAACCCTTTTGGACAGTCTGGTCCTGAGGGTGCCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp AGTTTCTTGAAGCCAGATGTAGGGAACAGTCTAATGGGCCTGGAACAGAAGCAATCCTCCCAAGGGAACTaGCTGGAGGACCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: SFLKPDVGNSLMGLEQKQSSQGN*LEDPRI
Trigger: GATCCTGGGGTCCTCCAGCCAGTTCCCTTGGGAGGA...TTGCTTCTGTTCCAGGCCCATTAGACTGTTCCCTACATCTGGCTTCAAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCAGCTATACTCCCAAGTaGCTCCACAGCTCCTGTATC +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRISYTPK*LHSSCI
Trigger: GATACAGGAGCTGTGGAGCCACTTGGGAGTATAGCT...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCGCATGCTCCGGTAGCTaGGGTGGTTGGGGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGACSGS*GGWGRR
Trigger: CCTACGACCCCAACCACCCCAGCTACCGGAGCATGC...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGAGCTCAAGGCCATGTTaGGGCAGATGCCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMSSRPC*GRCLGL
Trigger: AAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCT...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTAAAGGCCCAGAATTATaGGGCCAACTAGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VASRAFISTEATIVITVAKGPEL*GQLAAQ
Trigger: CTGGGCAGCTAGTTGGCCCCATAATTCTGGGCCTTT...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAATTGCCTTCCTTCCCTTaGGGACCTGGCACTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QITSHGQWPLKQNMCYQELPSFP*GPGTGV
Trigger: GACCCCAGTGCCAGGTCCTCAAGGGAAGGAAGGCAA...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AGGTCTGATGCCAATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGCCCAGGATCCTTTTCTaGACAAGTCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: RSDANLYQQVSEVGKDKVPRILF*TSPHSF
Trigger: GAAGGAGTGGGGACTTGTTCAGAAAAGGATCCTGGG...CACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGATTGGCATCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTCTGCTCACAGGGAGATaGGATGTCATTGTTGACCAC +
Preference number: 4 (lower is better)
Translates to: VASRAFISTEATIVITVALLTGR*DVIVDH
Trigger: GTGGTCAACAATGACATCTCATCTCCCTGTGAGCAG...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCCAAGGAACCTTTTTGTaGGACAGATGCACCGTTGCA +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIQGTFL*DRCTVA
Trigger: TGCAACGGTGCATCTGTCTCACAAAAAGGTTCCTTG...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAAATGACCGAGGGCTGCTaGCTGGAACTGCTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: QITSHGQWPLKQNMCYQEMTEGC*LELLSS
Trigger: CGAGCTGAGCAGTTCCAGTCAGCAGCCCTCGGTCAT...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAACAGCTCTCCAGCTCCTaGGGAAGAGGTAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QITSHGQWPLKQNMCYQEQLSSS*GRGRVR
Trigger: CCTGACCCTACCTCTTCCTCAGGAGCTGGAGAGCTG...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp ATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGGGAAGGTCTCAACCAGGCCTGCTGTAAATaGGTCTGTAGGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: ISTNKCLRWAKTRWEGLNQACCK*VCRGIL
Trigger: GAGGATTCCCCTACAGACTCATTTACAGCAGGCCTG...GTTGAGACCTTCCCACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp CTGCCACCTAAACACAGGCAGCCTCTCTGGCAGCTGCCACTGGTAAAAGGGAATCTATGTTCTCAGACCTaGCACATTGGTCAGTACATG +
Preference number: 4 (lower is better)
Translates to: LPPKHRQPLWQLPLVKGNLCSQT*HIGQYM
Trigger: CATGTACTGACCAATGTGGCAGGTCTGAGAACATAG...ATTCCCTTTTACCAGTGGCAGCTGCCAGAGAGGCTGCCTGTGTTTAGGTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCGCTGCTGACTGGAACTaGTCAGCTCGGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCAADWN*SARASF
Trigger: AAAAGAAGCCCGAGCTGAGCAGTTCCAGTCAGCAGC...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAACTCTTCCTTGAGTGCTaGCTCCCGCTCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QITSHGQWPLKQNMCYQELFLEC*LPLLQA
Trigger: GGCCTGAAGGAGCGGGAGGCAGCACTCAAGGAAGAG...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCCGCAACTCTAAGTCCTaGCATGGCCCCTTAAACGTG +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCRNSKS*HGPLNV
Trigger: CACGTTTAAGGGGCCATGGCAGGACTTAGAGTTGCG...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTGCCACCTAAACACAGGCAGCCTCTCTGGCAGCTGCCACTGGTAAAAGGGAATTTAACTTGCCTCTTCTaGTCCTCCCAGTCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: LPPKHRQPLWQLPLVKGNLTCLF*SSQSRN
Trigger: ATTTCTGGACTGGGAGGAGCAGAAGAGGCAAGTTAA...ATTCCCTTTTACCAGTGGCAGCTGCCAGAGAGGCTGCCTGTGTTTAGGTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTTGAGGACCTGGCACTaGGGTCACAAACTTGATGTT +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRILRTWH*GHKLDV
Trigger: AACATCAAGTTTGTGACCCCAGTGCCAGGTCCTCAA...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGCACCAAAAGGTGTATTaGCAGCACTGCTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMHQKVY*QHCWCG
Trigger: TCCACACCAGCAGTGCTGCCAATACACCTTTTGGTG...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTTCTGTCCAGAACAGTaGGTTCTACCTTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIFCPEQ*VLPLSQ
Trigger: CTGGGACAAAGGTAGAACCCACTGTTCTGGACAGAA...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGGCTTCAGCTCCATTCTaGGTCACCACATGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMASAPF*VTTCKG
Trigger: TCCCTTACATGTGGTGACCCAGAATGGAGCTGAAGC...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCAGGCCTTCAGGGGCCTaGCCCGGGAGTTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGRPSGA*PGSFEE
Trigger: CTCTTCAAAACTCCCGGGCCAGGCCCCTGAAGGCCT...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGAGGCACATGGACACTTaGCCGGGGCTCCTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGRHMDT*PGLLAP
Trigger: GGGAGCAAGGAGCCCCGGCCAAGTGTCCATGTGCCT...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAAGAGCAGTGGCTTCTCTaGGCTGAGGCCATGTTCCCC +
Preference number: 4 (lower is better)
Translates to: QITSHGQWPLKQNMCYQEEQWLL*AEAMFP
Trigger: GGGGAACATGGCCTCAGCCCAGAGAAGCCACTGCTC...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCAAGCTCCCCACACCTTaGGGAAGACATGACCCCAAT +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCKLPTP*GRHDPN
Trigger: ATTGGGGTCATGTCTTCCCCAAGGTGTGGGGAGCTT...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGAAACCTGTTCTCTTCTaGAGAACCCAAGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMKPVLF*RTQGCP
Trigger: TGGGCAGCCTTGGGTTCTCCAGAAGAGAACAGGTTT...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGAGCCACTTCGGTGAATaGAAATCTAAAGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQSHFGE*KSKGEE
Trigger: CTCTTCACCTTTAGATTTCCATTCACCGAAGTGGCT...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
3UTR CAA 72 bp TACAAGGCAGGTAGTCTGGACACTGGATTCAACAGCTaGCCATCAGCCAGGGAAAGTGAAGCTGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: YKAGSLDTGFNS*PSARESEAEDA
Trigger: TGCATCCTCAGCTTCACTTTCCCTGGCTGATGGCAAGCTGTTGAATCCAGTGTCCAGACTACCTGCCTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCCTTAGCCGCCTTCTCTaGGCCCTTGGGAGCAATAGC +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGLSRLL*ALGSNS
Trigger: GCTATTGCTCCCAAGGGCTCAGAGAAGGCGGCTAAG...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAAGAGGTCTGGTGGAGGTaGGATAGCCAAGGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VLVDRGIGLYISVASNEEEVWWR*DSQGSA
Trigger: GGCAGACCCTTGGCTATCTCACCTCCACCAGACCTC...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAAGATGGGGACCCCTGCTaGGCATCTCATCCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: VLVDRGIGLYISVASNEEDGDPC*ASHPSD
Trigger: GTCAGAGGGATGAGATGCTCAGCAGGGGTCCCCATC...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCGTGTATTGGCAGCACTaGTGGTGTGGAAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: WLINRLGLVVLALGSKFFVYWQH*WCGNRG
Trigger: TCCCCTGTTTCCACACCAGCAGTGCTGCCAATACAC...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAACTCTACCCCGGCCATTaGGCATTTCCAGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: QITSHGQWPLKQNMCYQELYPGH*AFPGHW
Trigger: CCAGTGACCTGGAAATGCGCAATGGCCGGGGTAGAG...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAAACTGGGGCTGGCTCGTaGCTTGTCAGCATCTTCACC +
Preference number: 4 (lower is better)
Translates to: QITSHGQWPLKQNMCYQETGAGS*LVSIFT
Trigger: GGTGAAGATGCTGACAAGGCACGAGCCAGCCCCAGT...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTTATCGTGGGAGACTTaGTCTTGTAGTGACTGGCAT +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRILSWET*SCSDWH
Trigger: ATGCCAGTCACTACAAGAGCAAGTCTCCCACGATAA...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTCTGCCTTCTGGGCCTTaGCCTAAGGTGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TQEITISFHRVPSYPSKRLPSGP*PKVTWQ
Trigger: CTGCCAGGTCACCTTAGGGCAAGGCCCAGAAGGCAG...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCGACATCTCCAAGAACTaGTGGGTGCTCCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGDISKN*WVLPGA
Trigger: AGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTC...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCCAGAGAGCTCCCAGCTaGATAGTTTCACAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCQRAPS*IVSQVS
Trigger: ACTCACCTGTGAAACTATGCAGCTGGGAGCTCTCTG...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTGCCACCTAAACACAGGCAGCCTCTCTGGCAGCTGCCACTGGTAAAAGGGAATTTTTCTTTCTCATTCTaGTGCCCCATTCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LPPKHRQPLWQLPLVKGNFSFSF*CPILRV
Trigger: GACTCTGAGAATGGGGCAGCAGAATGAGAAAGAAAA...ATTCCCTTTTACCAGTGGCAGCTGCCAGAGAGGCTGCCTGTGTTTAGGTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp AATCACAGCCAGCACAGGATGAGCCAAGCTAGTAACCAGCTGGAACCTGACTCTGGTGCACACCACCAATaGCCGGCTAATTTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: NHSQHRMSQASNQLEPDSGAHHQ*PANFCR
Trigger: TCTACAAAAATTAGCCGGGCATTGGTGGTGTGCACC...AGAGTCAGGTTCCAGCTGGTTACTAGCTTGGCTCATCCTGTGCTGGCTGTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACGCCGTCTCAGCTCAATaGAACCTCCACCTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNAVSAQ*NLHLAG
Trigger: GCCTGCGAGGTGGAGGTTGCATTGAGCTGAGACGGC...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp AGTATTATCCATCTGTACCCGAGAGAAAATAGCAAATCACAGCCAGCACAGGATGTGTGGCCACAGCATTaGGAGCCGGTATCCCCACCT +
Preference number: 4 (lower is better)
Translates to: SIIHLYPRENSKSQPAQDVWPQH*EPVSPP
Trigger: AGGTGGGGATACCGGCTCCCAATGCTGTGGCCACAC...ATCCTGTGCTGGCTGTGATTTGCTATTTTCTCTCGGGTACAGATGGATAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp TTTCAGCCCAATTATAATCTGAAGGGCAGCCACCCAATCAGTCCCTGCACCTCTATTCTCCCCTTCCTCTaGCTCCGGTTTAGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: FQPNYNLKGSHPISPCTSILPFL*LRFSSQ
Trigger: TTGGGAACTAAACCGGAGCCAGAGGAAGGGGAGAAT...AGAGGTGCAGGGACTGATTGGGTGGCTGCCCTTCAGATTATAATTGGGCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAACAGCCCCTGGCTCCTTaGCCTTGCCAGGTCCTGATT +
Preference number: 4 (lower is better)
Translates to: VLVDRGIGLYISVASNEEQPLAP*PCQVLI
Trigger: AATCAGGACCTGGCAAGGCCAAGGAGCCAGGGGCTG...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCGTCATTCTCACCTCCTaGGGGGTGGGTAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGVILTS*GVGRVR
Trigger: CCTCACTCTACCCACCCCCCAGGAGGTGAGAATGAC...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCACAGAGAGGGAACCTTaGCTCCACCTCACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGTEREP*LHLTGA
Trigger: GGCTCCTGTGAGGTGGAGCCAAGGTTCCCTCTCTGT...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTTGGTCTGGTGGTCTTaGCCCTTGGTAGCAAATTTT +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRILVWWS*PLVANF
Trigger: AAAATTTGCTACCAAGGGCCAAGACCACCAGACCAA...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CTGCAGGCACCTGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTGTGGGCAGCCATATCTaGCCACCTCTTACCTTTTCA +
Preference number: 4 (lower is better)
Translates to: LQAPVLPSQAEGKVSLHCVGSHI*PPLTFS
Trigger: TGAAAAGGTAAGAGGTGGCCAGATATGGCTGCCCAC...ACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACAGGTGCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp AGGTCTGATGCCAATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGTCACAGACCTGCTACTaGAGAAGCCCAGATGTTGCT +
Preference number: 4 (lower is better)
Translates to: RSDANLYQQVSEVGKDKVSQTCY*RSPDVA
Trigger: AGCAACATCTGGGCTTCTCCAGTAGCAGGTCTGTGA...CACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGATTGGCATCAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp GTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCTCAGCACAGGCAGCCTCTCTaGCAGCTGCCACTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: VCYPYIETSQTTGKPISQHRQPL*QLPLVK
Trigger: TTTTACCAGTGGCAGCTGCCAGAGAGGCTGCCTGTG...CTGAGAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp AATCACAGCCAGCACAGGATGAGCCAAGCTAGTAACCAGCTGGAACCTGACTCTAACCGCTCCTCTGCATaGTTCCTAACTTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: NHSQHRMSQASNQLEPDSNRSSA*FLTSFP
Trigger: AGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTT...AGAGTCAGGTTCCAGCTGGTTACTAGCTTGGCTCATCCTGTGCTGGCTGTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CAA 72 bp AGTACCTCTTGCCCTCAAAATGTGCCCCTTCGCTCTTaGGTAGCCGGCAATAGAACACTTCGTAGATATGCC +
Preference number: 4 (lower is better)
Translates to: STSCPQNVPLRS*VAGNRTLRRYA
Trigger: GGCATATCTACGAAGTGTTCTATTGCCGGCTACCAAAGAGCGAAGGGGCACATTTTGAGGGCAAGAGGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTATTGGCACCATCTCCTaGGCGCCCCTGCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: TQEITISFHRVPSYPSKRIGTIS*APLHLF
Trigger: AAAGAGGTGCAGGGGCGCTCAGGAGATGGTGCCAAT...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACATTGGCACCATCTCCTaGGCGCCCCTGCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNIGTIS*APLHLF
Trigger: AAAGAGGTGCAGGGGCGCTCAGGAGATGGTGCCAAT...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACGCACTTCCATCATACTaGCCACCCCGTCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNALPSY*PPRPPK
Trigger: CTTGGGAGGACGGGGTGGTCAGTATGATGGAAGTGC...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCCAGGGCTTTGGACTCTaGGCTGGATTTACAAGTCAC +
Preference number: 4 (lower is better)
Translates to: WLINRLGLVVLALGSKFFQGFGL*AGFTSH
Trigger: GTGACTTGTAAATCCAGCTCAGAGTCCAAAGCCCTG...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGTATCAGATGGCTAGATaGCAGGACATCTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMYQMAR*QDISKN
Trigger: GTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATA...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AGGGCAGCCACCCAATCAGTCCCTGCACCTCTATGTGAGAAAATGGGTTCCATTACCACGAGGAGACTTTaGTTCCTAATAGTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: RAATQSVPAPLCEKMGSITTRRL*FLIVVG
Trigger: TCCCACAACTATTAGGAATCAAAGTCTCCTCGTGGT...AATGGAACCCATTTTCTCACATAGAGGTGCAGGGACTGATTGGGTGGCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp AGGTCTGATGCCAATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGCCCTGCACCTCTATGTaGGAAAATGGGTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: RSDANLYQQVSEVGKDKVPCTSM*ENGFHL
Trigger: CAAATGGAACCCATTTTCTCACATAGAGGTGCAGGG...CACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGATTGGCATCAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp AATCACAGCCAGCACAGGATGAGCCAAGCTAGTAACCAGCTGGAACCTGACTCTAACAGGGGAAGGAATTaGGAAAGCAGGTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: NHSQHRMSQASNQLEPDSNRGRN*ESRFLL
Trigger: AAGCAAGAACCTGCTTTCTCAATTCCTTCCCCTGTT...AGAGTCAGGTTCCAGCTGGTTACTAGCTTGGCTCATCCTGTGCTGGCTGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTGACATTTCCAGTTTCTaGTGGTCCTTTTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: VASRAFISTEATIVITVADISSF*WSFSRS
Trigger: CGATCTGGAAAAGGACCAGCAGAAACTGGAAATGTC...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAATACTGTTGGGACGCATaGGTTTGCCTCTACCCCGGC +
Preference number: 4 (lower is better)
Translates to: VLVDRGIGLYISVASNEEYCWDA*VCLYPG
Trigger: GCCGGGGTAGAGGCAAACGCATGCGTCCCAACAGTA...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTTTGTCCACTCCCCGCTaGTGCTGCTCTAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TQEITISFHRVPSYPSKRLSTPR*CCSKLW
Trigger: CCAGAGCTTAGAGCAGCAGCAGCGGGGAGTGGACAA...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTGCAGGCACCTGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTAGAAACTCACAGACCTaGTACTGGAGAAGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LQAPVLPSQAEGKVSLHCRNSQT*YWRSPD
Trigger: ATCTGGGCTTCTCCAGTAGCAGGTCTGTGAGTTTCT...ACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACAGGTGCCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp AGTATTATCCATCTGTACCCGAGAGAAAATAGCAAATCACAGCCAGCACAGGATCCCAAGGGAACTGGCTaGAGGACCCCAGGATCCTTT +
Preference number: 4 (lower is better)
Translates to: SIIHLYPRENSKSQPAQDPKGTG*RTPGSF
Trigger: AAAGGATCCTGGGGTCCTCCAGCCAGTTCCCTTGGG...ATCCTGTGCTGGCTGTGATTTGCTATTTTCTCTCGGGTACAGATGGATAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCTTTCTTGTCCTTGGCTaGAGTCAAGGCAGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: WLINRLGLVVLALGSKFFFLVLG*SQGRVD
Trigger: GTCAACCCTGCCTTGACTCCAGCCAAGGACAAGAAA...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTGGTAGCTGGGGTGGTTaGGGTCGTAGGACTGACTGT +
Preference number: 4 (lower is better)
Translates to: TQEITISFHRVPSYPSKRGSWGG*GRRTDC
Trigger: ACAGTCAGTCCTACGACCCCAACCACCCCAGCTACC...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACAGCCTCCCCAGTAGCTaGGATTACGGGTGCACACCA +
Preference number: 4 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNSLPSS*DYGCTP
Trigger: TGGTGTGCACCCGTAATCCCAGCTACTGGGGAGGCT...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCCTTCTTGCTCTTAGATaGGCTGTTCTCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCLLALR*AVLLLL
Trigger: AAGGAGAAGGAGAACAGCTCATCTAAGAGCAAGAAG...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAAATCGGGTACGAACCATaGTCTGCTCACAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: QITSHGQWPLKQNMCYQEIGYEP*SAHREM
Trigger: CATCTCCCTGTGAGCAGATCATGGTTCGTACCCGAT...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCATCTGTATGGGCATaGGCTTGGTGGTACTTAAGT +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCSSVWA*AWWYLS
Trigger: ACTTAAGTACCACCAAGCTCATGCCCATACAGATGA...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAATGGGGGCATTGTCCGTaGAACTGTAGATCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: QITSHGQWPLKQNMCYQEWGHCP*NCRSCR
Trigger: CCGACAAGATCTACAGTTTCACGGACAATGCCCCCA...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGGCCTTGCCCTAAGGTaGCCTGGCAGACTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: NHVLVDRGIGLYISVASNGLALR*PGRLQG
Trigger: ACCTTGGAGTCTGCCAGGTCACCTTAGGGCAAGGCC...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCATCTGTGGCCTCAAATaGGGAAGATATCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCICGLK*GRYQMA
Trigger: AGCCATCTGATATCTTCCTCATTTGAGGCCACAGAT...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATCTATGGGAAGCCCCGTaGGCAATGTCTGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: NHVLVDRGIGLYISVASNLWEAP*AMSVRA
Trigger: GGCCCTCACAGACATTGCTCACGGGGCTTCCCATAG...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCTCAGCTACCAACAAGTGTCTaGGGTGGGCAAAGACAAGGT +
Preference number: 4 (lower is better)
Translates to: VCYPYIETSQTTGKPISQLPTSV*GGQRQG
Trigger: ACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAG...CTGAGAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp AGTTTCTTGAAGCCAGATGTAGGGAACAGTCTAATGGGCCTGGAACAGAAGCAAGGGAGATACCTGGCATaGAGCTACACCTTTAATGGC +
Preference number: 4 (lower is better)
Translates to: SFLKPDVGNSLMGLEQKQGRYLA*SYTFNG
Trigger: GCCATTAAAGGTGTAGCTTCATGCCAGGTATCTCCC...TTGCTTCTGTTCCAGGCCCATTAGACTGTTCCCTACATCTGGCTTCAAGAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp CTTCGTAGATATGCCATGAAATTTAGCCCTTTGTTCTACCAGAGACCCAACAGCTCTGCTGGGATCAGCTaGAAGCACAGGATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LRRYAMKFSPLFYQRPNSSAGIS*KHRMSR
Trigger: TCTGCTCATCCTGTGCTTTCAGCTGATCCCAGCAGA...GCTGTTGGGTCTCTGGTAGAACAAAGGGCTAAATTTCATGGCATATCTACGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp AGGGCAGCCACCCAATCAGTCCCTGCACCTCTATGTGAGAAAATGGGTTCCATTATTCCCTGCTGCAGCTaGTCTAATTACAGAGAAATC +
Preference number: 4 (lower is better)
Translates to: RAATQSVPAPLCEKMGSIIPCCS*SNYREI
Trigger: GATTTCTCTGTAATTAGATCAGCTGCAGCAGGGAAT...AATGGAACCCATTTTCTCACATAGAGGTGCAGGGACTGATTGGGTGGCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp AATCACAGCCAGCACAGGATGAGCCAAGCTAGTAACCAGCTGGAACCTGACTCTATGACAGTTCCCAGTTaGGAGGATGCAATTCTTAGA +
Preference number: 4 (lower is better)
Translates to: NHSQHRMSQASNQLEPDSMTVPS*EDAILR
Trigger: TCTAAGAATTGCATCCTCTCAACTGGGAACTGTCAT...AGAGTCAGGTTCCAGCTGGTTACTAGCTTGGCTCATCCTGTGCTGGCTGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp AGTTTCTTGAAGCCAGATGTAGGGAACAGTCTAATGGGCCTGGAACAGAAGCAACTCTTTCTTGCTAGCTaGCCCCTCACTTGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: SFLKPDVGNSLMGLEQKQLFLAS*PLTWSE
Trigger: TTCACTCCAAGTGAGGGGGCAGCTAGCAAGAAAGAG...TTGCTTCTGTTCCAGGCCCATTAGACTGTTCCCTACATCTGGCTTCAAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp GTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCTCAGCAAAGGATTGAGCGCTaGCCCAGGCTCAATAGCTAT +
Preference number: 4 (lower is better)
Translates to: VCYPYIETSQTTGKPISQQRIER*PRLNSY
Trigger: ATAGCTATTGAGCCTGGGGCAGCGCTCAATCCTTTG...CTGAGAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATAGAGCCTGGGCTCGCTaGTGTGAAGGTGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: NHVLVDRGIGLYISVASNRAWAR*CEGGCL
Trigger: CAGACAGCCACCTTCACAGCAGCGAGCCCAGGCTCT...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGTTTCAAGGCGGCTACTaGCTCCAATGGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGFQGGY*LQWKGW
Trigger: CCAGCCCTTCCATTGGAGGCAGTAGCCGCCTTGAAA...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGTACATATTGGGACGCTaGTGGATGACCGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGYILGR*WMTEGC
Trigger: GCAGCCCTCGGTCATCCAGCAGCGTCCCAATATGTA...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTGGTGAGGGGTATGGCTaGTGTGCTGTCTTCAGACCT +
Preference number: 4 (lower is better)
Translates to: TQEITISFHRVPSYPSKRGEGYG*CAVFRP
Trigger: AGGTCTGAAGACAGCACAGCAGCCATACCCCTCACC...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCCCATGTTGGGGCAGATaGCTTGGTCTTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGPCWGR*LGLPFQ
Trigger: CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGG...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGAATCTCCACAGCTGCTaGTTCATGTTATTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMNLHSC*FMLFQR
Trigger: CCTCTGAAATAACATGAAGCAGCAGCTGTGGAGATT...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCCAAGCCAGAAAACAATaGTGGGCAGAAAAGGGTTAC +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCQARKQ*WAEKGY
Trigger: GTAACCCTTTTCTGCCCAGCATTGTTTTCTGGCTTG...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGGGAAGGTCTCAACATTCTCCTCCAGCCCTaGAAGTTCCATTTCCTAAAG +
Preference number: 4 (lower is better)
Translates to: ISTNKCLRWAKTRWEGLNILLQP*KFHFLK
Trigger: CTTTAGGAAATGGAACTTGCAGGGCTGGAGGAGAAT...GTTGAGACCTTCCCACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp TGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTTGGCAGCTATTTCAGACCTGCCACATTaGTCAGTACATGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: CPSKSSRRQGIITLLAAISDLPH*SVHAQW
Trigger: CCACTGGGCATGTACTGACCAATGTGGCAGGTCTGA...AATAGCTGCCAACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp AAGGGAATGAGCCACTGTATTATTAGTGGAAGAAACTCACAGACCTGCTACTGGCTTCCCTTGAGGACCTaGCACTGGGGTCACAAACTT +
Preference number: 4 (lower is better)
Translates to: KGMSHCIISGRNSQTCYWLPLRT*HWGHKL
Trigger: AAGTTTGTGACCCCAGTGCCAGGTCCTCAAGGGAAG...CCAGTAGCAGGTCTGTGAGTTTCTTCCACTAATAATACAGTGGCTCATTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp CTTCGTAGATATGCCATGAAATTTAGCCCTTTGTTCTACCAGAGACCCAACAGCTCTCCTTCTCCTTTTTaGAACCGGCTACACTGCGGG +
Preference number: 4 (lower is better)
Translates to: LRRYAMKFSPLFYQRPNSSPSPF*NRLHCG
Trigger: CCCGCAGTGTAGCCGGTTCCAAAAAGGAGAAGGAGA...GCTGTTGGGTCTCTGGTAGAACAAAGGGCTAAATTTCATGGCATATCTACGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCCCTCAGAAGTGCTGCTaGCAGGTGGGCGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASPQKCC*QVGGAL
Trigger: CAGAGCACCGCCCACCTGCCAGCAGCACTTCTGAGG...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCCCGAGGGCTGCTGACTaGAACTGCTCAGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASPRAAD*NCSARA
Trigger: AGCCCGAGCTGAGCAGTTCCAGTCAGCAGCCCTCGG...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGGAGGAAGATATCAGATaGCTAGATGACAGGACATCT +
Preference number: 4 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMEEDIR*LDDRTS
Trigger: AGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCTCCAGCCTTTGTTTGTaGGGTGGGATAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGSSLCL*GGIGWG
Trigger: TCCCCATCCTATCCCACCCCACAAACAAAGGCTGGA...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCACCCTTCTAAGCGTGTaGTTCTTTGACCTTGTGATG +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCTLLSV*FFDLVM
Trigger: CATCACAAGGTCAAAGAACCACACGCTTAGAAGGGT...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCCCTGGGCTAAGCCAGTaGCCAAGCCAGAAAACAATG +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGPGLSQ*PSQKTM
Trigger: CATTGTTTTCTGGCTTGGCCACTGGCTTAGCCCAGG...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCAAAGCGGCCAAACAATaGTTTGGTTGGGCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCKAAKQ*FGWAVF
Trigger: AAACACAGCCCAACCAAACCATTGTTTGGCCGCTTT...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTTGGCAGCTATTTCAGTACATGCCCAGTaGACAACATCATTGCGCGCG +
Preference number: 4 (lower is better)
Translates to: CPSKSSRRQGIITLLAAISVHAQ*TTSLRA
Trigger: CGCGCGCAATGATGTTGTCCACTGGGCATGTACTGA...AATAGCTGCCAACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp ATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGGGAAGGTCTCAACGTTGTGGGAGATACCTaGCATGAAGCTACACCTTTA +
Preference number: 4 (lower is better)
Translates to: ISTNKCLRWAKTRWEGLNVVGDT*HEATPL
Trigger: TAAAGGTGTAGCTTCATGCCAGGTATCTCCCACAAC...GTTGAGACCTTCCCACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp GTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCTCAGCTGACTCTGCTGAAGTaGACTATAGCATCTGCCACC +
Preference number: 4 (lower is better)
Translates to: VCYPYIETSQTTGKPISQLTLLK*TIASAT
Trigger: GGTGGCAGATGCTATAGTCCACTTCAGCAGAGTCAG...CTGAGAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp CACCTGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTTGGCAGCAGGGACAAAACTCCCTaGCACCAGGATGTATTCTTA +
Preference number: 4 (lower is better)
Translates to: HLSFQVKQKARYHYTVGSRDKTP*HQDVFL
Trigger: TAAGAATACATCCTGGTGCCAGGGAGTTTTGTCCCT...GCTGCCAACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp CACCACCACCCAAACATACACATCCAGCCTTTATTTATTAACACTTACATATGGCTTAGCCGCCTTCTCTaGGCCCTTGGGAGCAATAGC +
Preference number: 4 (lower is better)
Translates to: HHHPNIHIQPLFINTYIWLSRLL*ALGSNS
Trigger: GCTATTGCTCCCAAGGGCTCAGAGAAGGCGGCTAAG...CCATATGTAAGTGTTAATAAATAAAGGCTGGATGTGTATGTTTGGGTGGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAACCCAGGATCCTTTTCTaGACAAGTCCCCACTCCTTC +
Preference number: 4 (lower is better)
Translates to: VLVDRGIGLYISVASNEEPRILF*TSPHSF
Trigger: GAAGGAGTGGGGACTTGTTCAGAAAAGGATCCTGGG...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGCCACATCACATGTGTTaGCCCCAACTGATCGGGTAC +
Preference number: 4 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGPHHMC*PQLIGY
Trigger: GTACCCGATCAGTTGGGGTCAACACATGTGATGTGG...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCAAGGCGAGACTCCTCTaGCGTGGGCAGCTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASKARLL*RGQLAV
Trigger: GACTGCAAGCTGCCCACGTCAGAGGAGTCTCGCCTT...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCAGAAGTCTCCACATTTaGAGACCTTGTTTTCACAAT +
Preference number: 4 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIRSLHI*RPCFHN
Trigger: ATTGTGAAAACAAGGTCTTCAAATGTGGAGACTTCT...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCAAAGCACAGCTCCACTaGGTACATTCTGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: WLINRLGLVVLALGSKFFKAQLH*VHSETL
Trigger: TAGAGTCTCAGAATGTACTCAGTGGAGCTGTGCTTT...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GTACTCCTAAGCCTCTTTAAAACAGTATTATCCATCTGTACCCGAGAGAAAATAAGTCCAGGGCAGTTCTaGCTGGCAGTCAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VLLSLFKTVLSICTREKISPGQF*LAVSGQ
Trigger: CTGCCCACTGACTGCCAGTCAGAACTGCCCTGGACT...TATTTTCTCTCGGGTACAGATGGATAATACTGTTTTAAAGAGGCTTAGGAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp AGGTCTGATGCCAATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGCATTACCAGCTGCTCTaGCCTTGTAATTGGTCATTA +
Preference number: 4 (lower is better)
Translates to: RSDANLYQQVSEVGKDKVHYQLL*PCNWSL
Trigger: TAATGACCAATTACAAGGTCAGAGCAGCTGGTAATG...CACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGATTGGCATCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGTGTTACTGGTCCCTTTaGTGTCAGAGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGCYWSL*CQRLWL
Trigger: CAGCCACAGCCTCTGACAGCAAAGGGACCAGTAACA...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAATTTGCTATTGGCTCCTaGCCGGGTTTTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QITSHGQWPLKQNMCYQEFAIGS*PGFAAV
Trigger: AACAGCAGCAAAACCCGGGCAGGAGCCAATAGCAAA...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTCATCCGCTTCCGGCTTaGTGTCATCATCTGTATGGG +
Preference number: 4 (lower is better)
Translates to: TQEITISFHRVPSYPSKRHPLPA*CHHLYG
Trigger: CCCATACAGATGATGACAGCAAGCCGGAAGCGGATG...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCTATTGGATCCATCTCTaGCTGTCGACCACACTCAGC +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGYWIHL*LSTTLS
Trigger: GCTGAGTGTGGTCGACAGGCAGAGATGGATCCAATA...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTTGCCAATTCCCAGGGTaGAAAGCACTAGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: TQEITISFHRVPSYPSKRCQFPG*KALGRC
Trigger: GCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCA...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTGCAGGCACCTGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTAGTCTGATGATGAAATaGCAGTCAAGCTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: LQAPVLPSQAEGKVSLHCSLMMK*QSSWET
Trigger: TGTTTCCCAGCTTGACTGGCATTTCATCATCAGACT...ACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACAGGTGCCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp CTTCGTAGATATGCCATGAAATTTAGCCCTTTGTTCTACCAGAGACCCAACAGCGTGGACTATAGCATCTaGCACCTAAACACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LRRYAMKFSPLFYQRPNSVDYSI*HLNTGS
Trigger: GCTGCCTGTGTTTAGGTGGCAGATGCTATAGTCCAC...GCTGTTGGGTCTCTGGTAGAACAAAGGGCTAAATTTCATGGCATATCTACGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCGTGTGGCCACAGCATTaGGAGCCGGTATCCCCACCT +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASVWPQH*EPVSPP
Trigger: AGGTGGGGATACCGGCTCCCAATGCTGTGGCCACAC...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TTCTGTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCAGCTATACTCCCAAGTaGCTCCACAGCTCCTGTATC +
Preference number: 4 (lower is better)
Translates to: FCLLSLHRNVPNHRQAHFSYTPK*LHSSCI
Trigger: GATACAGGAGCTGTGGAGCCACTTGGGAGTATAGCT...GAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTTATTGGCAGCACTGCTaGTGTGGAAACAGGGGACTC +
Preference number: 4 (lower is better)
Translates to: TQEITISFHRVPSYPSKRYWQHC*CGNRGL
Trigger: GAGTCCCCTGTTTCCACACCAGCAGTGCTGCCAATA...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGCCTTCCCATCTTCCTTaGGGACAGAGTCCTTACTCC +
Preference number: 4 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGPSHLP*GQSPYS
Trigger: GGAGTAAGGACTCTGTCCCCAAGGAAGATGGGAAGG...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTTTTCCAGCCTACACTaGTGTCTGTCAGTCTTTATC +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCFSSLH*CLSVFI
Trigger: GATAAAGACTGACAGACACCAGTGTAGGCTGGAAAA...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCGAAATCAACTACTACTaGGCATTGTGCTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCEINYY*ALCLLS
Trigger: GGACAGTAAGCACAATGCCCAGTAGTAGTTGATTTC...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAAGCTCATAAACAGGCTTaGTCTGGTGGTCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VLVDRGIGLYISVASNEEAHKQA*SGGLGP
Trigger: AGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGC...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAATGCCCAGTTGCATCTTaGGGGCATCAGAGTAGACAA +
Preference number: 4 (lower is better)
Translates to: QITSHGQWPLKQNMCYQECPVAS*GHQSRQ
Trigger: TTGTCTACTCTGATGCCCCCAAGATGCAACTGGGCA...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCTCAGAACAAGTGTCTGAGGTaGGCAAAGACAAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: VCYPYIETSQTTGKPISQNKCLR*AKTRWE
Trigger: TTCCCACCTTGTCTTTGCCCACCTCAGACACTTGTT...CTGAGAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp GTACTCCTAAGCCTCTTTAAAACAGTATTATCCATCTGTACCCGAGAGAAAATAAGTTCTAACCCCTCCTaGGGCTGCAGGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: VLLSLFKTVLSICTREKISSNPS*GCRHLS
Trigger: GGACAGGTGCCTGCAGCCCCAGGAGGGGTTAGAACT...TATTTTCTCTCGGGTACAGATGGATAATACTGTTTTAAAGAGGCTTAGGAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CAA 72 bp TCACTGAGCACCTATTATGCCCCAAACCGGAGATTGTaGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTA +
Preference number: 4 (lower is better)
Translates to: SLSTYYAPNRRL*FLKNRSSAWFL
Trigger: TAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAACAATCTCCGGTTTGGGGCATAATAGGTGCTCAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CAA 72 bp TACTCACTGAGCACCTATTATGCCCCAAACCGGAGATaGTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTC +
Preference number: 4 (lower is better)
Translates to: YSLSTYYAPNRR*LFLKNRSSAWF
Trigger: GAACCATGCAGAGGAGCGGTTTTTGAGAAACAACAATCTCCGGTTTGGGGCATAATAGGTGCTCAGTGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGTGTTTCATCCATCACTaGGGGTCCATCATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGCFIHH*GSIIRA
Trigger: GGCTCTGATGATGGACCCTCAGTGATGGATGAAACA...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTGCTGTTGGTTTTGACTaGGCTGGCTTCAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: TQEITISFHRVPSYPSKRAVGFD*AGFSSI
Trigger: AATGGAGCTGAAGCCAGCTCAGTCAAAACCAACAGC...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGCACCCTTTAAAATTCTaGTCAAATACTCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMHPLKF*SNTLDP
Trigger: TGGGTCAAGAGTATTTGATCAGAATTTTAAAGGGTG...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AGGGCAGCCACCCAATCAGTCCCTGCACCTCTATGTGAGAAAATGGGTTCCATTAAACAAATAAAGGTCTaGTGCCAATCTCTACCAACA +
Preference number: 4 (lower is better)
Translates to: RAATQSVPAPLCEKMGSIKQIKV*CQSLPT
Trigger: TGTTGGTAGAGATTGGCATCAGACCTTTATTTGTTT...AATGGAACCCATTTTCTCACATAGAGGTGCAGGGACTGATTGGGTGGCTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp AATCACAGCCAGCACAGGATGAGCCAAGCTAGTAACCAGCTGGAACCTGACTCTTTCGTAGATATGCCATaGAATTTAGCCCTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: NHSQHRMSQASNQLEPDSFVDMP*NLALCS
Trigger: AGAACAAAGGGCTAAATTTCATGGCATATCTACGAA...AGAGTCAGGTTCCAGCTGGTTACTAGCTTGGCTCATCCTGTGCTGGCTGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATTCTCCTGAGCGCCCCTaGACCTCTTTCTTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: NHVLVDRGIGLYISVASNSPERP*TSFLLA
Trigger: AGCTAGCAAGAAAGAGGTGCAGGGGCGCTCAGGAGA...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCGTACGAACCATGATCTaGTCACAGGGAGATGAGATG +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGVRTMI*SQGDEM
Trigger: CATCTCATCTCCCTGTGAGCAGATCATGGTTCGTAC...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGTTAAGTCCATTGATGTaGTTGTACTTCTTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMLSPLM*LYFLLQ
Trigger: CTGCAACAAGAAGTACAAGCACATCAATGGACTTAA...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCTTTCATTTCATAGGGTaGCCTCTTACCCTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: WLINRLGLVVLALGSKFFFHFIG*PLTLLS
Trigger: GCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAA...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTGCAGGCACCTGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTATTCTACAAAGTAGCTaGCCCCAACAACAAATATCC +
Preference number: 4 (lower is better)
Translates to: LQAPVLPSQAEGKVSLHCILQSS*PQQQIS
Trigger: GGATATTTGTTGTTGGGGGCAGCTACTTTGTAGAAT...ACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACAGGTGCCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp CTAATAGTTGTGGGAGATACCTGGCATGAAGCTACACCTTTAATGGCCAATCTCTCTTTCTCATTCTGCTaGCCCATTCTCAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LIVVGDTWHEATPLMANLSFSFC*PILRVS
Trigger: GGAGACTCTGAGAATGGGGCAGCAGAATGAGAAAGA...GAGATTGGCCATTAAAGGTGTAGCTTCATGCCAGGTATCTCCCACAACTATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp TTCTGTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCTTGAGGACCTGGCACTaGGGTCACAAACTTGATGTT +
Preference number: 4 (lower is better)
Translates to: FCLLSLHRNVPNHRQAHFLRTWH*GHKLDV
Trigger: AACATCAAGTTTGTGACCCCAGTGCCAGGTCCTCAA...GAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCTGGCTTGTGCCACTGTaGCGGTCAAGCCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASWLVPL*RSSLRK
Trigger: CTTCCTCAGGCTTGACCGCCACAGTGGCACAAGCCA...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCGGCTACTGCCTCCAATaGAAGGGCTGGGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASGYCLQ*KGWGHC
Trigger: ACAATGCCCCCAGCCCTTCCATTGGAGGCAGTAGCC...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTTGCTGCTCTAAGCTCTaGCGTTTCTGCTGTTCTTCG +
Preference number: 4 (lower is better)
Translates to: TQEITISFHRVPSYPSKRCCSKL*RFCCSS
Trigger: CGAAGAACAGCAGAAACGCCAGAGCTTAGAGCAGCA...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTGGGAAAAAGAGTAGCTaGAAGGCAGGTAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: TQEITISFHRVPSYPSKRGKKSS*KAGRNL
Trigger: CAGGTTCCTACCTGCCTTCCAGCTACTCTTTTTCCC...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAAATTTACAAGTCACACTaGGGCTGGCTCGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: VLVDRGIGLYISVASNEEIYKSH*GWLVPC
Trigger: ACAAGGCACGAGCCAGCCCCAGTGTGACTTGTAAAT...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCCCCAAGTGGTGGTGGTaGTGGTGTGTGGACATCAGG +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASPKWWW*WCVDIR
Trigger: CCTGATGTCCACACACCACCACCACCACCACTTGGG...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCGAGCATTCTAGAGGCTaGAATGTCGGGGGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGEHSRG*NVGGVL
Trigger: TAAAACTCCCCCGACATTCCAGCCTCTAGAATGCTC...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AGGTCTGATGCCAATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGAAATGCCAGTCAAGCTaGGAAACAAATAAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RSDANLYQQVSEVGKDKVKCQSS*ETNKGL
Trigger: CAGACCTTTATTTGTTTCCCAGCTTGACTGGCATTT...CACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGATTGGCATCAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp TTTCAGCCCAATTATAATCTGAAGGGCAGCCACCCAATCAGTCCCTGCACCTCTGTATCATTACACTGTTaGCAGCTATTAAACCACGAG +
Preference number: 4 (lower is better)
Translates to: FQPNYNLKGSHPISPCTSVSLHC*QLLNHE
Trigger: CTCGTGGTTTAATAGCTGCCAACAGTGTAATGATAC...AGAGGTGCAGGGACTGATTGGGTGGCTGCCCTTCAGATTATAATTGGGCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp CTTCGTAGATATGCCATGAAATTTAGCCCTTTGTTCTACCAGAGACCCAACAGCTTCTCAGAGTCTCCCTaGGAGGCAAAGCTTATATGG +
Preference number: 4 (lower is better)
Translates to: LRRYAMKFSPLFYQRPNSFSESP*EAKLIW
Trigger: CCATATAAGCTTTGCCTCCCAGGGAGACTCTGAGAA...GCTGTTGGGTCTCTGGTAGAACAAAGGGCTAAATTTCATGGCATATCTACGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp ATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGGGAAGGTCTCAACTCAAATCTTCCTCATTaGCTAGTAGTCAACACTGCT +
Preference number: 4 (lower is better)
Translates to: ISTNKCLRWAKTRWEGLNSNLPH*LVVNTA
Trigger: AGCAGTGTTGACTACTAGCCAATGAGGAAGATTTGA...GTTGAGACCTTCCCACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CAA 72 bp GTTCCAGGGTCCTTGGAAATCAACTACTACTGGGCATaGTGCTTACTGTCCCCTATTTCCCATTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: VPGSLEINYYWA*CLLSPISHFPN
Trigger: GTTTGGAAAATGGGAAATAGGGGACAGTAAGCACAATGCCCAGTAGTAGTTGATTTCCAAGGACCCTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATTTTCCGCTTATTAGCTaGGGAAGGGCTGGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: NHVLVDRGIGLYISVASNFPLIS*GRAGLD
Trigger: GTCAAGGCCAGCCCTTCCTCAGCTAATAAGCGGAAA...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGCTGTTCGGCGTCCTTTaGTTTGACACTGTCTACCTT +
Preference number: 4 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGLFGVL*FDTVYL
Trigger: AAGGTAGACAGTGTCAAATCAAAGGACGCCGAACAG...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATAGCATCTTCACCACCTaGGACCTTGCTGCCATATGG +
Preference number: 4 (lower is better)
Translates to: NHVLVDRGIGLYISVASNSIFTT*DLAAIW
Trigger: CCATATGGCAGCAAGGTCTCAGGTGGTGAAGATGCT...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTTTTCTCTTCTTGCCTaGATGTACAAAGGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCFSLLA*MYKGKK
Trigger: CTTTTTGCCTTTGTACATTCAGGCAAGAAGAGAAAA...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GTACTCCTAAGCCTCTTTAAAACAGTATTATCCATCTGTACCCGAGAGAAAATAACAGCCAGCACAGGATaGGCCAAGCTAGTAACCAGC +
Preference number: 4 (lower is better)
Translates to: VLLSLFKTVLSICTREKITASTG*AKLVTS
Trigger: GCTGGTTACTAGCTTGGCTCATCCTGTGCTGGCTGT...TATTTTCTCTCGGGTACAGATGGATAATACTGTTTTAAAGAGGCTTAGGAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp GTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCTCAGACATTGGTCAGTACATaGCCAGTGGACAACATCATT +
Preference number: 4 (lower is better)
Translates to: VCYPYIETSQTTGKPISQTLVST*PVDNII
Trigger: AATGATGTTGTCCACTGGGCATGTACTGACCAATGT...CTGAGAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp TGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTTGGCAGCTATTGACATTTCCAGTTTCTaGTGGTCCTTTTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: CPSKSSRRQGIITLLAAIDISSF*WSFSRS
Trigger: CGATCTGGAAAAGGACCAGCAGAAACTGGAAATGTC...AATAGCTGCCAACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp CCAGTAATTTCAATATTCAAATCTTCCTCATTGGCTAGTAGTCAACACTGCTACTCTCCTGAGCGCCCCTaGACCTCTTTCTTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: PVISIFKSSSLASSQHCYSPERP*TSFLLA
Trigger: AGCTAGCAAGAAAGAGGTGCAGGGGCGCTCAGGAGA...GTAGCAGTGTTGACTACTAGCCAATGAGGAAGATTTGAATATTGAAATTACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAACCCAATCATGTCGTGTaGAGTCAAGGAGTGTACCTA +
Preference number: 4 (lower is better)
Translates to: VLVDRGIGLYISVASNEEPNHVV*SQGVYL
Trigger: TAGGTACACTCCTTGACTGCACACGACATGATTGGG...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATACAGAACCTTGGGGGTaGCCAATCATGTCGTGTGCA +
Preference number: 4 (lower is better)
Translates to: NHVLVDRGIGLYISVASNTEPWG*PIMSCA
Trigger: TGCACACGACATGATTGGGCACCCCCAAGGTTCTGT...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGCACCTGAGACCTTGCTaGCATATGGGGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGHLRPC*HMGKKS
Trigger: ACTCTTTTTCCCCATATGGCAGCAAGGTCTCAGGTG...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCTACTACTGGGCATTGTaGTTACTGTCCCCTATTTCC +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGYYWAL*LLSPIS
Trigger: GGAAATAGGGGACAGTAAGCACAATGCCCAGTAGTA...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCATGCAGGGCCATGCCTaGCCAATGCAAAAGAAAATT +
Preference number: 4 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGMQGHA*PMQKKI
Trigger: AATTTTCTTTTGCATTGGGCAGGCATGGCCCTGCAT...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AGGTCTGATGCCAATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGATTATCATTACCAGCTaGTCTGACCTTGTAATTGGT +
Preference number: 4 (lower is better)
Translates to: RSDANLYQQVSEVGKDKVIIITS*SDLVIG
Trigger: ACCAATTACAAGGTCAGAGCAGCTGGTAATGATAAT...CACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGATTGGCATCAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp TTCTGTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCACTGAGCACCTATTATaGCCCAAACCGGAGATTGTT +
Preference number: 4 (lower is better)
Translates to: FCLLSLHRNVPNHRQAHFTEHLL*PKPEIV
Trigger: AACAATCTCCGGTTTGGGGCATAATAGGTGCTCAGT...GAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp CTAATAGTTGTGGGAGATACCTGGCATGAAGCTACACCTTTAATGGCCAATCTCGCTAGTAGTCAACACTaGTACTCTGCACCACAGAAT +
Preference number: 4 (lower is better)
Translates to: LIVVGDTWHEATPLMANLASSQH*YSAPQN
Trigger: ATTCTGTGGTGCAGAGTAGCAGTGTTGACTACTAGC...GAGATTGGCCATTAAAGGTGTAGCTTCATGCCAGGTATCTCCCACAACTATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAACAATCCAGAGGGTCATaGAAAGATAGGAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: VLVDRGIGLYISVASNEEQSRGS*KDRRGE
Trigger: TTCTCCCCTCCTATCTTTCCATGACCCTCTGGATTG...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTGGCCAAACAATGGTTTaGTTGGGCTGTGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TQEITISFHRVPSYPSKRGQTMV*LGCVSE
Trigger: CTCTGAAACACAGCCCAACCAAACCATTGTTTGGCC...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GTACTCCTAAGCCTCTTTAAAACAGTATTATCCATCTGTACCCGAGAGAAAATACTCTATTGCCTAGGCTaGAGTCCAGTGGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: VLLSLFKTVLSICTREKILYCLG*SPVVPS
Trigger: AGACGGCACCACTGGACTCCAGCCTAGGCAATAGAG...TATTTTCTCTCGGGTACAGATGGATAATACTGTTTTAAAGAGGCTTAGGAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CAA 72 bp TCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTaGGCAGCTATTAAACCACGAGGAGACTTTGATTCC +
Preference number: 4 (lower is better)
Translates to: SKSSRRQGIITL*AAIKPRGDFDS
Trigger: GGAATCAAAGTCTCCTCGTGGTTTAATAGCTGCCAACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp CACCACCACCCAAACATACACATCCAGCCTTTATTTATTAACACTTACATATGGCTGGGGTCACAAACTTaGTGTTGTCTGGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: HHHPNIHIQPLFINTYIWLGSQT*CCLVVW
Trigger: CCACACTACCAGACAACATCAAGTTTGTGACCCCAG...CCATATGTAAGTGTTAATAAATAAAGGCTGGATGTGTATGTTTGGGTGGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCGGTATACGGGATAAGTaGCATGGGTGGCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASGIRDK*HGWPQS
Trigger: GCTTTGAGGCCACCCATGTCACTTATCCCGTATACC...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAAATGGAACAAAATCTATaGACAGCAACACTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VLVDRGIGLYISVASNEEMEQNL*TATLPL
Trigger: GAGGGGCAGTGTTGCTGTTCATAGATTTTGTTCCAT...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGGGAATTGACGGCTTTTaGTTCCACTCTTCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGGIDGF*FHSSLS
Trigger: ACTCAAGGAAGAGTGGAAGCAAAAGCCGTCAATTCC...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATATGGTGGCTTTCACCTaGTCTTCTGAGCAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: NHVLVDRGIGLYISVASNMVAFT*SSEQLL
Trigger: TAGGAGCTGCTCAGAAGAGCAGGTGAAAGCCACCAT...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AGAGACCCAACAGCACCATTTATCCCATCAAGAACCGTACTCAATCTACATTATTCCTTTCCTTTAACTTaGCTCTTCTGCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RDPTAPFIPSRTVLNLHYSFPLT*LFCSSQ
Trigger: CTGGGAGGAGCAGAAGAGGCAAGTTAAAGGAAAGGA...ATAATGTAGATTGAGTACGGTTCTTGATGGGATAAATGGTGCTGTTGGGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCTCTCCTTCTCCTTTTTaGAACCGGCTACACTGCGGG +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASSPSPF*NRLHCG
Trigger: CCCGCAGTGTAGCCGGTTCCAAAAAGGAGAAGGAGA...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGCTTTGGACTCTGAGCTaGATTTACAAGTCACACTGG +
Preference number: 4 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGLWTLS*IYKSHW
Trigger: CCAGTGTGACTTGTAAATCCAGCTCAGAGTCCAAAG...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATCATCAGGATCTGCCATaGTGGCTTTCACCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: NHVLVDRGIGLYISVASNHQDLP*WLSPAL
Trigger: AAGAGCAGGTGAAAGCCACCATGGCAGATCCTGATG...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACTTATACTGCATCTGCTaGGATCAGCTGAAAGCACAG +
Preference number: 4 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNLYCIC*DQLKAQ
Trigger: CTGTGCTTTCAGCTGATCCCAGCAGATGCAGTATAA...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp AGAGACCCAACAGCACCATTTATCCCATCAAGAACCGTACTCAATCTACATTATAGCATGAGCTACCACTaGAATACAGGCACTAAGAGG +
Preference number: 4 (lower is better)
Translates to: RDPTAPFIPSRTVLNLHYSMSYH*NTGTKR
Trigger: CCTCTTAGTGCCTGTATTCCAGTGGTAGCTCATGCT...ATAATGTAGATTGAGTACGGTTCTTGATGGGATAAATGGTGCTGTTGGGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAACCTCGATCTCTCTCCTaGGAAGTTTTATCACTTATC +
Preference number: 4 (lower is better)
Translates to: VLVDRGIGLYISVASNEEPRSLS*EVLSLI
Trigger: GATAAGTGATAAAACTTCTCAGGAGAGAGATCGAGG...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATAAGCGTGTGGTTCTTTaGCCTTGTGATGTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NHVLVDRGIGLYISVASNKRVVL*PCDVWR
Trigger: TCTCCACACATCACAAGGTCAAAGAACCACACGCTT...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp CACCACCACCCAAACATACACATCCAGCCTTTATTTATTAACACTTACATATGGAAGTTTAATGCTGCCTaGGCTGACCCTAGACTCACA +
Preference number: 4 (lower is better)
Translates to: HHHPNIHIQPLFINTYIWKFNAA*ADPRLT
Trigger: TGTGAGTCTAGGGTCAGCTCAGGCAGCATTAAACTT...CCATATGTAAGTGTTAATAAATAAAGGCTGGATGTGTATGTTTGGGTGGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp CACCACCACCCAAACATACACATCCAGCCTTTATTTATTAACACTTACATATGGAGCCCAATTATAATCTaGAGGGCAGCCACCCAATCA +
Preference number: 4 (lower is better)
Translates to: HHHPNIHIQPLFINTYIWSPIII*RAATQS
Trigger: TGATTGGGTGGCTGCCCTTCAGATTATAATTGGGCT...CCATATGTAAGTGTTAATAAATAAAGGCTGGATGTGTATGTTTGGGTGGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp CTAATAGTTGTGGGAGATACCTGGCATGAAGCTACACCTTTAATGGCCAATCTCCTATCTTTCAAAAACTaGAGCACAGTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LIVVGDTWHEATPLMANLLSFKN*STVSFP
Trigger: AGGGAAAGAGACTGTGCTTCAGTTTTTGAAAGATAG...GAGATTGGCCATTAAAGGTGTAGCTTCATGCCAGGTATCTCCCACAACTATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGACATTGGTCAGTACATaGCCAGTGGACAACATCATT +
Preference number: 4 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGTLVST*PVDNII
Trigger: AATGATGTTGTCCACTGGGCATGTACTGACCAATGT...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCCAAAGGATTGAGCGCTaGCCCAGGCTCAATAGCTAT +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASQRIER*PRLNSY
Trigger: ATAGCTATTGAGCCTGGGGCAGCGCTCAATCCTTTG...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCCTGACGTGGGCAGCTTaGAGTCACTACTTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASLTWAA*SHYLCF
Trigger: AAAGCACAAGTAGTGACTGCAAGCTGCCCACGTCAG...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCAGGAATGCAGGGCCATaGCTGCCCAATGCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASRNAGP*LPNAKE
Trigger: TTCTTTTGCATTGGGCAGGCATGGCCCTGCATTCCT...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTAATAGTTGTGGGAGATACCTGGCATGAAGCTACACCTTTAATGGCCAATCTCAATTTATACTGCATCTaGTGGGATCAGCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LIVVGDTWHEATPLMANLNLYCI*WDQLKA
Trigger: TGCTTTCAGCTGATCCCAGCAGATGCAGTATAAATT...GAGATTGGCCATTAAAGGTGTAGCTTCATGCCAGGTATCTCCCACAACTATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp TGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTTGGCAGCTATTGAAATCAATTTATACTaGATCTGCTGGGATCAGCTG +
Preference number: 4 (lower is better)
Translates to: CPSKSSRRQGIITLLAAIEINLY*ICWDQL
Trigger: CAGCTGATCCCAGCAGATGCAGTATAAATTGATTTC...AATAGCTGCCAACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCGGGTTCCAGGGTCCTTaGAAATCAACTACTACTGGG +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASGFQGP*KSTTTG
Trigger: CCCAGTAGTAGTTGATTTCCAAGGACCCTGGAACCC...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAACACTGGAAAGCTTCCTaGGATGCCCAAGTAATTAAA +
Preference number: 4 (lower is better)
Translates to: VLVDRGIGLYISVASNEEHWKAS*DAQVIK
Trigger: TTTAATTACTTGGGCATCCCAGGAAGCTTTCCAGTG...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCTTTCATCCCATCTCCTaGAGATTCCCTGAATGGGCT +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASFHPIS*RFPEWA
Trigger: AGCCCATTCAGGGAATCTTCAGGAGATGGGATGAAA...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCACTCAGAACCCAACTTaGACAAAAACGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASTQNPT*TKTRRQ
Trigger: CTGCCTCCTCGTTTTTGTTCAAGTTGGGTTCTGAGT...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCGGGGAGACTTGGATATaGGGATCAAAGAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASGETWI*GSKSQM
Trigger: CATTTGGCTCTTTGATCCTCATATCCAAGTCTCCCC...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR TCA 90 bp AGTATTATCCATCTGTACCCGAGAGAAAATAGCAAATCACAGCCAGCACAGGATCCATTTCCTAAAGCATaGACTAAGATCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SIIHLYPRENSKSQPAQDPFPKA*TKIIFP
Trigger: TGGGAAGATGATCTTAGTTCATGCTTTAGGAAATGG...ATCCTGTGCTGGCTGTGATTTGCTATTTTCTCTCGGGTACAGATGGATAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACACTGGTAAAAGGGAATaGGCCACTGTATTATTAGTG +
Preference number: 4 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNTGKRE*ATVLLV
Trigger: CACTAATAATACAGTGGCTCATTCCCTTTTACCAGT...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAAGTGAGCGTTTATATGTaGTCATGTAAATGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: VLVDRGIGLYISVASNEEVSVYM*SCKWGE
Trigger: TTCTCCCCATTTACATGAGCACATATAAACGCTCAC...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATAATTCTCTAGCCCTCTaGAGTCTTAACTCGCAACTC +
Preference number: 4 (lower is better)
Translates to: NHVLVDRGIGLYISVASNNSLAL*SLNSQL
Trigger: GAGTTGCGAGTTAAGACTGCAGAGGGCTAGAGAATT...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp CTAATAGTTGTGGGAGATACCTGGCATGAAGCTACACCTTTAATGGCCAATCTCGAGAAAGCAGGTTCTTaGTTATGGTTACATGAAACT +
Preference number: 4 (lower is better)
Translates to: LIVVGDTWHEATPLMANLEKAGS*LWLHET
Trigger: AGTTTCATGTAACCATAAGCAAGAACCTGCTTTCTC...GAGATTGGCCATTAAAGGTGTAGCTTCATGCCAGGTATCTCCCACAACTATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCAGATGTCCAGGGCTTTaGACTCTGAGCTGGATTTAC +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASRCPGL*TLSWIY
Trigger: GTAAATCCAGCTCAGAGTCCAAAGCCCTGGACATCT...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAATTTTATCACTTATCGTaGGAGACTTGCTCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: QITSHGQWPLKQNMCYQEFYHLS*ETCSCS
Trigger: ACTACAAGAGCAAGTCTCCCACGATAAGTGATAAAA...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCAGAGATGTCAGAGTATaGAGGGCTGTTGGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASRDVRV*RAVGFD
Trigger: GTCAAAACCAACAGCCCTGCATACTCTGACATCTCT...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGCCATGCCTGCCCAATaGAAAAGAAAATTACTCCTA +
Preference number: 4 (lower is better)
Translates to: NHVLVDRGIGLYISVASNAMPAQ*KRKLLL
Trigger: TAGGAGTAATTTTCTTTTGCATTGGGCAGGCATGGC...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR GCA 90 bp AGTATTATCCATCTGTACCCGAGAGAAAATAGCAAATCACAGCCAGCACAGGATCTGGGCTTAGAAGGTTaGAACATAAGTACTCTAAAA +
Preference number: 4 (lower is better)
Translates to: SIIHLYPRENSKSQPAQDLGLEG*NISTLK
Trigger: TTTTAGAGTACTTATGTTGCAACCTTCTAAGCCCAG...ATCCTGTGCTGGCTGTGATTTGCTATTTTCTCTCGGGTACAGATGGATAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR TCA 90 bp GTACTCCTAAGCCTCTTTAAAACAGTATTATCCATCTGTACCCGAGAGAAAATATACCTCAAAGTACAATaGGTACCTCTTGCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: VLLSLFKTVLSICTREKIYLKVQ*VPLALK
Trigger: TTTGAGGGCAAGAGGTACTCATTGTACTTTGAGGTA...TATTTTCTCTCGGGTACAGATGGATAATACTGTTTTAAAGAGGCTTAGGAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACAAAATGGGTTCCATTTaGTTCTCTGTTAGAGACAAT +
Preference number: 4 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNKMGSI*FSVRDN
Trigger: ATTGTCTCTAACAGAGAAGCAAATGGAACCCATTTT...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp GTACTCCTAAGCCTCTTTAAAACAGTATTATCCATCTGTACCCGAGAGAAAATATCAACACTGCTACTCTaGACCACAGAATTCAGTCAA +
Preference number: 4 (lower is better)
Translates to: VLLSLFKTVLSICTREKISTLLL*TTEFSQ
Trigger: TTGACTGAATTCTGTGGTGCAGAGTAGCAGTGTTGA...TATTTTCTCTCGGGTACAGATGGATAATACTGTTTTAAAGAGGCTTAGGAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR GCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCAATCAAAGGCATCATTaGTTGTTTCATCCATCACTG +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASNQRHH*LFHPSL
Trigger: CAGTGATGGATGAAACAAGCAATGATGCCTTTGATT...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCGGACTGTGCATAACTTaGAGAATAGTAACTCTCAAA +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASGLCIT*RIVTLK
Trigger: TTTGAGAGTTACTATTCTCCAAGTTATGCACAGTCC...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCAAACAATGGTTTGGTTaGGCTGTGTTTCAGAGTATA +
Preference number: 4 (lower is better)
Translates to: NKATKSSSLSQYKEYKASKQWFG*AVFQSI
Trigger: TATACTCTGAAACACAGCCCAACCAAACCATTGTTT...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CCA 90 bp CACCACCACCCAAACATACACATCCAGCCTTTATTTATTAACACTTACATATGGGAGGCAAAGCTTATATaGCAAAGCAACATTATTAAG +
Preference number: 4 (lower is better)
Translates to: HHHPNIHIQPLFINTYIWEAKLI*QSNIIK
Trigger: CTTAATAATGTTGCTTTGCCATATAAGCTTTGCCTC...CCATATGTAAGTGTTAATAAATAAAGGCTGGATGTGTATGTTTGGGTGGTGGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
3UTR CAA 72 bp GAACCGTACTCAATCTACATTATCACCAAAGGCGTATaGTTTATCAACTATTATGAGTCTGATGATGAAATG +
Preference number: 4 (lower is better)
Translates to: EPYSIYIITKGV*FINYYESDDEM
Trigger: CATTTCATCATCAGACTCATAATAGTTGATAAACAATACGCCTTTGGTGATAATGTAGATTGAGTACGGTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGTCAGCCCCTGGCTCCTaGGCCTTGCCAGGTCCTGAT +
Preference number: 5 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWASAPGS*ALPGPD
Trigger: ATCAGGACCTGGCAAGGCCAAGGAGCCAGGGGCTGA...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 90 bp GTGCTGGGAGCAATGAGTACCCCAAGTGGTGGTGGTGGTGGTGTGTaGACATCAGGCGCTGGGAAGGAGAGGTGCGGGGCCGGTCAACAC +
Preference number: 5 (lower is better)
Translates to: VLGAMSTPSGGGGGV*TSGAGKERCGAGQH
Trigger: GTGTTGACCGGCCCCGCACCTCTCCTTCCCAGCGCCTGATGTCCACACACCACCACCACCACCACTTGGGGTACTCATTGCTCCCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp ATGGCTGCTGTGCTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCAGGCACATGGACACTaGGCCGGGGCTCCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: MAAVLSSDLTQCLGVGVPQAHGH*AGAPCS
Trigger: GGAGCAAGGAGCCCCGGCCAAGTGTCCATGTGCCTG...AGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAGCACAGCAGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCATCCGTTCACCCCCACTaGCTCCCCCGACGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPSVHPH*LPRRCY
Trigger: GTAGCAGCGTCGGGGGAGCAAGTGGGGGTGAACGGA...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 90 bp CAGAAGTGCTGCTGGCAGGTGGGCGGTGCTCTGAAGAATTCTGGCTaGCCCGACGGCCTTTGCTATTGGCTCCTGCCCGGGTTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: QKCCWQVGGALKNSG*PDGLCYWLLPGFCC
Trigger: GCAGCAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACCGCCCACCTGCCAGCAGCACTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CCA 90 bp TTGTACTGTGCTGGGAGCAATGAGTACCCCAAGTGGTGGTGGTGGTaGTGTGTGGACATCAGGCGCTGGGAAGGAGAGGTGCGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: LYCAGSNEYPKWWWW*CVDIRRWEGEVRGR
Trigger: CCGGCCCCGCACCTCTCCTTCCCAGCGCCTGATGTCCACACACCACCACCACCACCACTTGGGGTACTCATTGCTCCCAGCACAGTACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGTTAGTTCCCAAAGGATaGAGCGCTGCCCCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWALVPKG*SAAPGS
Trigger: TGAGCCTGGGGCAGCGCTCAATCCTTTGGGAACTAA...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGTCCCTGAATGGGCTTTaGCCTTCCTCTGCTCGACAC +
Preference number: 5 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWASLNGL*PSSARH
Trigger: GTGTCGAGCAGAGGAAGGCAAAAGCCCATTCAGGGA...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGCTTGGCCGGGGCTCCTaGCTCCCAAGGCGAGACTCC +
Preference number: 5 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQLGRGS*LPRRDS
Trigger: GGAGTCTCGCCTTGGGAGCAAGGAGCCCCGGCCAAG...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 90 bp GGCCTTGACATCCTCAGAAGTGCTGCTGGCAGGTGGGCGGTGCTCTaGAGAATTCTGGCTGCCCCGACGGCCTTTGCTATTGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GLDILRSAAGRWAVL*RILAAPTAFAIGSC
Trigger: GCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACCGCCCACCTGCCAGCAGCACTTCTGAGGATGTCAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS TCA 90 bp TTGGGGACTGTTGGGCATGGCTTGTGCCACTGTGGCGGTCAAGCCTaGGGAAGAGCCTGGGCTCGCTGCTGTGAAGGTGGCTGTCTGGAA +
Preference number: 5 (lower is better)
Translates to: LGTVGHGLCHCGGQA*GRAWARCCEGGCLE
Trigger: TTCCAGACAGCCACCTTCACAGCAGCGAGCCCAGGCTCTTCCTCAGGCTTGACCGCCACAGTGGCACAAGCCATGCCCAACAGTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 90 bp GGGCTGGCCTTGACATCCTCAGAAGTGCTGCTGGCAGGTGGGCGGTaGTCTGAAGAATTCTGGCTGCCCCGACGGCCTTTGCTATTGGCT +
Preference number: 5 (lower is better)
Translates to: GLALTSSEVLLAGGR*SEEFWLPRRPLLLA
Trigger: AGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACCGCCCACCTGCCAGCAGCACTTCTGAGGATGTCAAGGCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS GCA 90 bp CCGGGGCTCTGCCTCCTGTCGGTACCAGAGTATTGGATCCATCTCTaGCTGTCGACCACACTCAGCACCTGTCTTGGCCTCAGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: PGLCLLSVPEYWIHL*LSTTLSTCLGLRGL
Trigger: GAGGCCTCTGAGGCCAAGACAGGTGCTGAGTGTGGTCGACAGGCAGAGATGGATCCAATACTCTGGTACCGACAGGAGGCAGAGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 90 bp TCCTCAGAAGTGCTGCTGGCAGGTGGGCGGTGCTCTGAAGAATTCTaGCTGCCCCGACGGCCTTTGCTATTGGCTCCTGCCCGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: SSEVLLAGGRCSEEF*LPRRPLLLAPARVL
Trigger: CAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACCGCCCACCTGCCAGCAGCACTTCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS-3UTR CAA 90 bp ATGGCTGCTGTGCTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTTTGGGACGCATGCGTTaGCCTCTACCCCGGCCATTG +
Preference number: 5 (lower is better)
Translates to: MAAVLSSDLTQCLGVGVPLGRMR*PLPRPL
Trigger: CAATGGCCGGGGTAGAGGCAAACGCATGCGTCCCAA...AGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAGCACAGCAGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAATGAGGGAGGCTGTTTaGGGGCCCTGCCAAGAGGTC +
Preference number: 5 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPMREAV*GPCQEV
Trigger: GACCTCTTGGCAGGGCCCCAAAACAGCCTCCCTCAT...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 90 bp GGCTGCCCCGACGGCCTTTGCTATTGGCTCCTGCCCGGGTTTTGCTaGTGTTACTGGTCCCTTTGCTGTCAGAGGCTGTGGCTGTCTCAT +
Preference number: 5 (lower is better)
Translates to: GCPDGLCYWLLPGFC*CYWSLCCQRLWLSH
Trigger: ATGAGACAGCCACAGCCTCTGACAGCAAAGGGACCAGTAACAGCAGCAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS GCA 90 bp TCTGGCTGCCCCGACGGCCTTTGCTATTGGCTCCTGCCCGGGTTTTaGTGCTGTTACTGGTCCCTTTGCTGTCAGAGGCTGTGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: SGCPDGLCYWLLPGF*CCYWSLCCQRLWLS
Trigger: AGACAGCCACAGCCTCTGACAGCAAAGGGACCAGTAACAGCAGCAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS GCA 90 bp CAGGTGGGCGGTGCTCTGAAGAATTCTGGCTGCCCCGACGGCCTTTaGTATTGGCTCCTGCCCGGGTTTTGCTGCTGTTACTGGTCCCTT +
Preference number: 5 (lower is better)
Translates to: QVGGALKNSGCPDGL*YWLLPGFCCCYWSL
Trigger: AAGGGACCAGTAACAGCAGCAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACCGCCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CCA 90 bp GGAATAGCCGTGCATGTAGGGGATGTAGGACTGGTGCTGGGTAAGTaGGGAGGACACAGGCACATGGACACTTGGCCGGGGCTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: GIAVHVGDVGLVLGK*GGHRHMDTWPGLLA
Trigger: AGCAAGGAGCCCCGGCCAAGTGTCCATGTGCCTGTGTCCTCCCCACTTACCCAGCACCAGTCCTACATCCCCTACATGCACGGCTATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 90 bp AAGTTGTACTGTGCTGGGAGCAATGAGTACCCCAAGTGGTGGTGGTaGTGGTGTGTGGACATCAGGCGCTGGGAAGGAGAGGTGCGGGGC +
Preference number: 5 (lower is better)
Translates to: KLYCAGSNEYPKWWW*WCVDIRRWEGEVRG
Trigger: GCCCCGCACCTCTCCTTCCCAGCGCCTGATGTCCACACACCACCACCACCACCACTTGGGGTACTCATTGCTCCCAGCACAGTACAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCACTGAATGGGCTTGAGTaGGGGACTGTTGGGCATGGC +
Preference number: 5 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPLNGLE*GTVGHG
Trigger: GCCATGCCCAACAGTCCCCAACTCAAGCCCATTCAG...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 90 bp CTTTTTGGAACCGGCTACACTGCGGGATGCCTTAGCCGCCTTCTCTaGGCCCTTGGGAGCAATAGCAGCAACCAGGCCTCCAGCATTGGC +
Preference number: 5 (lower is better)
Translates to: LFGTGYTAGCLSRLL*ALGSNSSNQASSIG
Trigger: GCCAATGCTGGAGGCCTGGTTGCTGCTATTGCTCCCAAGGGCTCAGAGAAGGCGGCTAAGGCATCCCGCAGTGTAGCCGGTTCCAAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS TCA 90 bp ATGGACACTTGGCCGGGGCTCCTTGCTCCCAAGGCGAGACTCCTCTaGCGTGGGCAGCTTGCAGTCACTACTTGTGCTTTCCTTCCCATC +
Preference number: 5 (lower is better)
Translates to: MDTWPGLLAPKARLL*RGQLAVTTCAFLPI
Trigger: GATGGGAAGGAAAGCACAAGTAGTGACTGCAAGCTGCCCACGTCAGAGGAGTCTCGCCTTGGGAGCAAGGAGCCCCGGCCAAGTGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 90 bp TCCTTCAGGCCCATCTCTGCCTTCTTGTCCACTCCCCGCTGCTGCTaGTCTAAGCTCTGGCGTTTCTGCTGTTCTTCGTACTGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: SFRPISAFLSTPRCC*SKLWRFCCSSYCCR
Trigger: CCGGCAGCAGTACGAAGAACAGCAGAAACGCCAGAGCTTAGAGCAGCAGCAGCGGGGAGTGGACAAGAAGGCAGAGATGGGCCTGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 90 bp CGCTCCTTCAGGCCCATCTCTGCCTTCTTGTCCACTCCCCGCTGCTaGTGCTCTAAGCTCTGGCGTTTCTGCTGTTCTTCGTACTGCTGC +
Preference number: 5 (lower is better)
Translates to: RSFRPISAFLSTPRC*CSKLWRFCCSSYCC
Trigger: GCAGCAGTACGAAGAACAGCAGAAACGCCAGAGCTTAGAGCAGCAGCAGCGGGGAGTGGACAAGAAGGCAGAGATGGGCCTGAAGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 90 bp TCCCGCTCCTTCAGGCCCATCTCTGCCTTCTTGTCCACTCCCCGCTaGTGCTGCTCTAAGCTCTGGCGTTTCTGCTGTTCTTCGTACTGC +
Preference number: 5 (lower is better)
Translates to: SRSFRPISAFLSTPR*CCSKLWRFCCSSYC
Trigger: GCAGTACGAAGAACAGCAGAAACGCCAGAGCTTAGAGCAGCAGCAGCGGGGAGTGGACAAGAAGGCAGAGATGGGCCTGAAGGAGCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 90 bp GGGGCTCCTTGCTCCCAAGGCGAGACTCCTCTGACGTGGGCAGCTTaGAGTCACTACTTGTGCTTTCCTTCCCATCTTCCTTGGGGACAG +
Preference number: 5 (lower is better)
Translates to: GAPCSQGETPLTWAA*SHYLCFPSHLPWGQ
Trigger: CTGTCCCCAAGGAAGATGGGAAGGAAAGCACAAGTAGTGACTGCAAGCTGCCCACGTCAGAGGAGTCTCGCCTTGGGAGCAAGGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 90 bp TTCAGCTTCAGCTATGTTCTCAGACCTGCCACATTGGTCAGTACATaGCCAGTGGACAACATCATTGCGCGCGGCCGGTCCCGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: FSFSYVLRPATLVST*PVDNIIARGRSREP
Trigger: CGGCTCCCGGGACCGGCCGCGCGCAATGATGTTGTCCACTGGGCATGTACTGACCAATGTGGCAGGTCTGAGAACATAGCTGAAGCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS CCA 90 bp GGCGGTGCTCTGAAGAATTCTGGCTGCCCCGACGGCCTTTGCTATTaGCTCCTGCCCGGGTTTTGCTGCTGTTACTGGTCCCTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: GGALKNSGCPDGLCY*LLPGFCCCYWSLCC
Trigger: ACAGCAAAGGGACCAGTAACAGCAGCAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CCA 90 bp CCACACTCAGCACCTGTCTTGGCCTCAGAGGCCTCCTTGCTTAGGTaGCTGGCATCACTCAGCTTCACTTTAAGGCCTTCAGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PHSAPVLASEASLLR*LASLSFTLRPSGAW
Trigger: CCAGGCCCCTGAAGGCCTTAAAGTGAAGCTGAGTGATGCCAGCCACCTAAGCAAGGAGGCCTCTGAGGCCAAGACAGGTGCTGAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 90 bp CACTTGGCCGGGGCTCCTTGCTCCCAAGGCGAGACTCCTCTGACGTaGGCAGCTTGCAGTCACTACTTGTGCTTTCCTTCCCATCTTCCT +
Preference number: 5 (lower is better)
Translates to: HLAGAPCSQGETPLT*AACSHYLCFPSHLP
Trigger: AGGAAGATGGGAAGGAAAGCACAAGTAGTGACTGCAAGCTGCCCACGTCAGAGGAGTCTCGCCTTGGGAGCAAGGAGCCCCGGCCAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 90 bp GGTAAGTTGTACTGTGCTGGGAGCAATGAGTACCCCAAGTGGTGGTaGTGGTGGTGTGTGGACATCAGGCGCTGGGAAGGAGAGGTGCGG +
Preference number: 5 (lower is better)
Translates to: GKLYCAGSNEYPKWW*WWCVDIRRWEGEVR
Trigger: CCGCACCTCTCCTTCCCAGCGCCTGATGTCCACACACCACCACCACCACCACTTGGGGTACTCATTGCTCCCAGCACAGTACAACTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGATTCAAGGCTCTTCCTaGCCCCCAGCTTTCCTATTT +
Preference number: 5 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWAIQGSS*PPAFLF
Trigger: AAATAGGAAAGCTGGGGGCAAGGAAGAGCCTTGAAT...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGCGACGGCCTTTGCTATaGGCTCCTGCCCGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLRRPLL*APARVL
Trigger: CAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCG...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGCTGCCCCGACGGCCTTaGCTATTGGCTCCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMLPRRP*LLAPAR
Trigger: CCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAG...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGCTCCAGCACCAGCTaGCTCCCAGTGTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SSTCCQFPGCKALGRCRICSSTS*LPVSLG
Trigger: CCCCAGGGACACTGGGAGCAAGCTGGTGCTGGAGCA...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGGACTCAGAACCCAACTaGAACAAAAACGAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWADSEPN*NKNEEA
Trigger: TGCCTCCTCGTTTTTGTTCAAGTTGGGTTCTGAGTC...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAGCAGCTCTCCAAGCCTaGCCTGATCTATCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPAALQA*PDLSGD
Trigger: ATCCCCAGATAGATCAGGCAAGGCTTGGAGAGCTGC...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 90 bp CTCCCCTTCCTCTGGCTCCGGTTTAGTTCCCAAAGGATTGAGCGCTaGCCCAGGCTCAATAGCTATACTCCCAAGTGGCTCCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: LPFLWLRFSSQRIER*PRLNSYTPKWLHSS
Trigger: GGAGCTGTGGAGCCACTTGGGAGTATAGCTATTGAGCCTGGGGCAGCGCTCAATCCTTTGGGAACTAAACCGGAGCCAGAGGAAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS GCA 90 bp AAGGCAGGTAGGAACCTGGGTAGTTCTGCATCATCACAGCAGGCATaGTCCGGTAGCTGGGGTGGTTGGGGTCGTAGGACTGACTGTAGG +
Preference number: 5 (lower is better)
Translates to: KAGRNLGSSASSQQA*SGSWGGWGRRTDCR
Trigger: CCTACAGTCAGTCCTACGACCCCAACCACCCCAGCTACCGGAGCATGCCTGCTGTGATGATGCAGAACTACCCAGGTTCCTACCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAATGTCTCAACCGGGTTaGCATCCACTCCTTTCCCTC +
Preference number: 5 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPMSQPG*HPLLSL
Trigger: GAGGGAAAGGAGTGGATGCAAACCCGGTTGAGACAT...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGGGGAGTCACAGAACCTaGGGGGTGCCCAATCATGTC +
Preference number: 5 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLGSHRT*GVPNHV
Trigger: GACATGATTGGGCACCCCCAAGGTTCTGTGACTCCC...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGGGAATGATGACTGATTaGGCTGGGTCAGCCCCTGGC +
Preference number: 5 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLGMMTD*AGSAPG
Trigger: GCCAGGGGCTGACCCAGCCAAATCAGTCATCATTCC...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTCCCTGGTGGGCGAACTACTACTGGGCATaGTGCTTACTGTCCCCTATT +
Preference number: 5 (lower is better)
Translates to: LSSDLTQCLGVGVPPWWANYYWA*CLLSPI
Trigger: AATAGGGGACAGTAAGCACAATGCCCAGTAGTAGTT...CGCCCACCAGGGAGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 90 bp CAGAACAGTGGGTTCTACCTTTGTCCCAGGAAGGGGGCCAGTGGCTaGGCCCATGGAATTAGTACGGACACGCTTGCTCCCTTTGGAGTC +
Preference number: 5 (lower is better)
Translates to: QNSGFYLCPRKGASG*AHGISTDTLAPFGV
Trigger: GACTCCAAAGGGAGCAAGCGTGTCCGTACTAATTCCATGGGCTCAGCCACTGGCCCCCTTCCTGGGACAAAGGTAGAACCCACTGTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CCA 90 bp GTATTGGATCCATCTCTGCCTGTCGACCACACTCAGCACCTGTCTTaGCCTCAGAGGCCTCCTTGCTTAGGTGGCTGGCATCACTCAGCT +
Preference number: 5 (lower is better)
Translates to: VLDPSLPVDHTQHLS*PQRPPCLGGWHHSA
Trigger: AGCTGAGTGATGCCAGCCACCTAAGCAAGGAGGCCTCTGAGGCCAAGACAGGTGCTGAGTGTGGTCGACAGGCAGAGATGGATCCAATAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 90 bp AGTTCTGCATCATCACAGCAGGCATGCTCCGGTAGCTGGGGTGGTTaGGGTCGTAGGACTGACTGTAGGAATAGCCGTGCATGTAGGGGA +
Preference number: 5 (lower is better)
Translates to: SSASSQQACSGSWGG*GRRTDCRNSRACRG
Trigger: TCCCCTACATGCACGGCTATTCCTACAGTCAGTCCTACGACCCCAACCACCCCAGCTACCGGAGCATGCCTGCTGTGATGATGCAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 90 bp AACCTGGGTAGTTCTGCATCATCACAGCAGGCATGCTCCGGTAGCTaGGGTGGTTGGGGTCGTAGGACTGACTGTAGGAATAGCCGTGCA +
Preference number: 5 (lower is better)
Translates to: NLGSSASSQQACSGS*GGWGRRTDCRNSRA
Trigger: TGCACGGCTATTCCTACAGTCAGTCCTACGACCCCAACCACCCCAGCTACCGGAGCATGCCTGCTGTGATGATGCAGAACTACCCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AATCACAGCCAGCACAGGATGAGCCAAGCTAGTAACCAGCTGGAACCTGACTCTAGTGTGGCCACAGCATaGGGAGCCGGTATCCCCACC +
Preference number: 5 (lower is better)
Translates to: NHSQHRMSQASNQLEPDSSVATA*GAGIPT
Trigger: GGTGGGGATACCGGCTCCCAATGCTGTGGCCACACT...AGAGTCAGGTTCCAGCTGGTTACTAGCTTGGCTCATCCTGTGCTGGCTGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAACGATGCCTTCAAGGTaGACGCTAGTTCCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPTMPSR*TLVPGS
Trigger: TGAACCTGGAACTAGCGTCAACCTTGAAGGCATCGT...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGCCATCCGCTTCCGGCTaGCTGTCATCATCTGTATGG +
Preference number: 5 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLPSASG*LSSSVW
Trigger: CCATACAGATGATGACAGCAAGCCGGAAGCGGATGG...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGTCTACAAGTCGAACTTaGGGGGTAGCTGAGCGGGCA +
Preference number: 5 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQSTSRT*GVAERA
Trigger: TGCCCGCTCAGCTACCCCCAAAGTTCGACTTGTAGA...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTCCCAGGGGCTGTTGAGTTGGGGACTGTaGGGCATGGCTTGTGCCACT +
Preference number: 5 (lower is better)
Translates to: RWLDDRTSPRTAGCSQGLLSWGL*GMACAT
Trigger: AGTGGCACAAGCCATGCCCAACAGTCCCCAACTCAA...CAGCCCCTGGGAGCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGCCCATCTCTGCCTTCTaGTCCACTCCCCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMPISAF*STPRCC
Trigger: GCAGCAGCGGGGAGTGGACAAGAAGGCAGAGATGGG...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCGCCTCAGAGGCCTCCTaGCTTAGGTGGCTGGCATCA +
Preference number: 5 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIASEAS*LRWLAS
Trigger: TGATGCCAGCCACCTAAGCAAGGAGGCCTCTGAGGC...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GGAAAGGCACCCTCAGGACCAGACTGTCCAAAAGGGTTGAGGGAACAGGGGAAGGTGCCCCTTCGCTCTTaGGTAGCCGGCAATAGAACA +
Preference number: 5 (lower is better)
Translates to: GKAPSGPDCPKGLREQGKVPLRS*VAGNRT
Trigger: TGTTCTATTGCCGGCTACCAAAGAGCGAAGGGGCAC...CTTCCCCTGTTCCCTCAACCCTTTTGGACAGTCTGGTCCTGAGGGTGCCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS TCA 90 bp GCAGGGTTGACTGTGAAAGGTTCTCCCATAACAGTGGGCTTGGGCTaGATGGGCTTGAGTTGGGGACTGTTGGGCATGGCTTGTGCCACT +
Preference number: 5 (lower is better)
Translates to: AGLTVKGSPITVGLG*MGLSWGLLGMACAT
Trigger: AGTGGCACAAGCCATGCCCAACAGTCCCCAACTCAAGCCCATTCAGCCCAAGCCCACTGTTATGGGAGAACCTTTCACAGTCAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 90 bp GTAGTGACTGGCATGCTGCTGCAAGATGTCCAGGGCTTTGGACTCTaGGCTGGATTTACAAGTCACACTGGGGCTGGCTCGTGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: VVTGMLLQDVQGFGL*AGFTSHTGAGSCLV
Trigger: GACAAGGCACGAGCCAGCCCCAGTGTGACTTGTAAATCCAGCTCAGAGTCCAAAGCCCTGGACATCTTGCAGCAGCATGCCAGTCACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 90 bp CAAGGCGAGACTCCTCTGACGTGGGCAGCTTGCAGTCACTACTTGTaGTTTCCTTCCCATCTTCCTTGGGGACAGAGTCCTTACTCCGAC +
Preference number: 5 (lower is better)
Translates to: QGETPLTWAACSHYL*FPSHLPWGQSPYSD
Trigger: GTCGGAGTAAGGACTCTGTCCCCAAGGAAGATGGGAAGGAAAGCACAAGTAGTGACTGCAAGCTGCCCACGTCAGAGGAGTCTCGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 90 bp GACTGGCATGCTGCTGCAAGATGTCCAGGGCTTTGGACTCTGAGCTaGATTTACAAGTCACACTGGGGCTGGCTCGTGCCTTGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: DWHAAARCPGLWTLS*IYKSHWGWLVPCQH
Trigger: ATGCTGACAAGGCACGAGCCAGCCCCAGTGTGACTTGTAAATCCAGCTCAGAGTCCAAAGCCCTGGACATCTTGCAGCAGCATGCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp ATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGGGAAGGTCTCAACACCAGGCCTCCAGCATaGGCACCATCTCCTGAGCGC +
Preference number: 5 (lower is better)
Translates to: ISTNKCLRWAKTRWEGLNTRPPA*APSPER
Trigger: GCGCTCAGGAGATGGTGCCAATGCTGGAGGCCTGGT...GTTGAGACCTTCCCACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAGATGAGATGTCATTGTaGACCACTGGCACCAAAAGG +
Preference number: 5 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPDEMSL*TTGTKR
Trigger: CCTTTTGGTGCCAGTGGTCAACAATGACATCTCATC...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGCCTCTACCCCGGCCATaGCGCATTTCCAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMPLPRP*RISRSL
Trigger: CAGTGACCTGGAAATGCGCAATGGCCGGGGTAGAGG...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTCAGTGGGTTCTACCTTaGTCCCAGGAAGGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: VASRAFISTEATIVITVAQWVLP*SQEGGQ
Trigger: CTGGCCCCCTTCCTGGGACAAAGGTAGAACCCACTG...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTCAGCAGACCAAGGGCTaGGGGAACAGAGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: VASRAFISTEATIVITVAQQTKG*GNRAVA
Trigger: AGCCACTGCTCTGTTCCCCAAGCCCTTGGTCTGCTG...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCACTCTTCAGGGGAGACTaGGATATGAGGATCAAAGAG +
Preference number: 5 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPLFRGD*DMRIKE
Trigger: CTCTTTGATCCTCATATCCAAGTCTCCCCTGAAGAG...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 90 bp ATTTGCCTTCCTTCCCTTGAGGACCTGGCACTGGGGTCACAAACTTaGTGTTGTCTGGTAGTGTGGCCACAGCATTGGGAGCCGGTATCC +
Preference number: 5 (lower is better)
Translates to: ICLPSLEDLALGSQT*CCLVVWPQHWEPVS
Trigger: GGATACCGGCTCCCAATGCTGTGGCCACACTACCAGACAACATCAAGTTTGTGACCCCAGTGCCAGGTCCTCAAGGGAAGGAAGGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS TCA 90 bp GGTTGTAGTACAGGGACTGCATGTACATATTGGGACGCTGCTGGATaGCCGAGGGCTGCTGACTGGAACTGCTCAGCTCGGGCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: GCSTGTACTYWDAAG*PRAADWNCSARASF
Trigger: AAAAGAAGCCCGAGCTGAGCAGTTCCAGTCAGCAGCCCTCGGTCATCCAGCAGCGTCCCAATATGTACATGCAGTCCCTGTACTACAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 90 bp TCCAATGTCCCATTCATCCCCACTGTCGTATGTCTCAACCGGGTTTaGATCCACTCCTTTCCCTCCGGAGGCTCCACTGCTCAAGGACAT +
Preference number: 5 (lower is better)
Translates to: SNVPFIPTVVCLNRV*IHSFPSGGSTAQGH
Trigger: ATGTCCTTGAGCAGTGGAGCCTCCGGAGGGAAAGGAGTGGATGCAAACCCGGTTGAGACATACGACAGTGGGGATGAATGGGACATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CCA 90 bp CAAAGGATTGAGCGCTGCCCCAGGCTCAATAGCTATACTCCCAAGTaGCTCCACAGCTCCTGTATCCACCCCTGCACTTCCATCATACTG +
Preference number: 5 (lower is better)
Translates to: QRIERCPRLNSYTPK*LHSSCIHPCTSIIL
Trigger: CAGTATGATGGAAGTGCAGGGGTGGATACAGGAGCTGTGGAGCCACTTGGGAGTATAGCTATTGAGCCTGGGGCAGCGCTCAATCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CCA 90 bp AGATGTCCAGGGCTTTGGACTCTGAGCTGGATTTACAAGTCACACTaGGGCTGGCTCGTGCCTTGTCAGCATCTTCACCACCTGAGACCT +
Preference number: 5 (lower is better)
Translates to: RCPGLWTLSWIYKSH*GWLVPCQHLHHLRP
Trigger: AGGTCTCAGGTGGTGAAGATGCTGACAAGGCACGAGCCAGCCCCAGTGTGACTTGTAAATCCAGCTCAGAGTCCAAAGCCCTGGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 90 bp TGCTCTTGTAGTGACTGGCATGCTGCTGCAAGATGTCCAGGGCTTTaGACTCTGAGCTGGATTTACAAGTCACACTGGGGCTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: CSCSDWHAAARCPGL*TLSWIYKSHWGWLV
Trigger: CACGAGCCAGCCCCAGTGTGACTTGTAAATCCAGCTCAGAGTCCAAAGCCCTGGACATCTTGCAGCAGCATGCCAGTCACTACAAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGTTGACACTGTCTACCTaGCCCTCCCCATCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMLTLST*PSPSSP
Trigger: TGGGGAGGATGGGGAGGGCAAGGTAGACAGTGTCAA...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCACCTTCAGCACCTCCTaGGGTAAGCCAGTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: WLINRLGLVVLALGSKFFTFSTS*GKPVRA
Trigger: GGCCCGGACTGGCTTACCCAAGGAGGTGCTGAAGGT...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGGCCATGTTCCCCTGGTaGCTTCCCGTGCCTTCATCT +
Preference number: 5 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMAMFPW*LPVPSS
Trigger: AGATGAAGGCACGGGAAGCAACCAGGGGAACATGGC...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp ATGGCTGCTGTGCTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTAAATTTTTCCAGCCTTaGTTTGTGGGGTGGGATAGG +
Preference number: 5 (lower is better)
Translates to: MAAVLSSDLTQCLGVGVPKFFQP*FVGWDR
Trigger: CCTATCCCACCCCACAAACAAAGGCTGGAAAAATTT...AGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAGCACAGCAGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 90 bp TGCTGTTACTGGTCCCTTTGCTGTCAGAGGCTGTGGCTGTCTCATTaGCAGGTGTATTACTGTTGGGACGCATGCGTTTGCCTCTACCCC +
Preference number: 5 (lower is better)
Translates to: CCYWSLCCQRLWLSH*QVYYCWDACVCLYP
Trigger: GGGGTAGAGGCAAACGCATGCGTCCCAACAGTAATACACCTGTCAATGAGACAGCCACAGCCTCTGACAGCAAAGGGACCAGTAACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS TCA 90 bp GACTGCATGTACATATTGGGACGCTGCTGGATGACCGAGGGCTGCTaGCTGGAACTGCTCAGCTCGGGCTTCTTTTCTTCACAGATATCG +
Preference number: 5 (lower is better)
Translates to: DCMYILGRCWMTEGC*LELLSSGFFSSQIS
Trigger: CGATATCTGTGAAGAAAAGAAGCCCGAGCTGAGCAGTTCCAGTCAGCAGCCCTCGGTCATCCAGCAGCGTCCCAATATGTACATGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 90 bp GGAGCCGGTATCCCCACCTCCTTTGAGCCTGACATTTCCAGTTTCTaGTGGTCCTTTTCCAGATCGGCGTCCAGGTCAATGATGAGATTC +
Preference number: 5 (lower is better)
Translates to: GAGIPTSFEPDISSF*WSFSRSASRSMMRF
Trigger: GAATCTCATCATTGACCTGGACGCCGATCTGGAAAAGGACCAGCAGAAACTGGAAATGTCAGGCTCAAAGGAGGTGGGGATACCGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CCA 90 bp CCTTTTTGTGAGACAGATGCACCGTTGCAGCTCCCAAGATCTGCATaGAGAATAGGTTCCTCTCCGTACTCACTGTCCCCATCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: PFCETDAPLQLPRSA*RIGSSPYSLSPSAS
Trigger: GGAAGCGGATGGGGACAGTGAGTACGGAGAGGAACCTATTCTCCATGCAGATCTTGGGAGCTGCAACGGTGCATCTGTCTCACAAAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CCA 90 bp TTACAGAGGCCTTTTGTGCTGAATTTGCTTGAAGGAGAAGGGCTATaGGGCTCTACAAGTCGAACTTTGGGGGTAGCTGAGCGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LQRPFVLNLLEGEGL*GSTSRTLGVAERAG
Trigger: CCCTGCCCGCTCAGCTACCCCCAAAGTTCGACTTGTAGAGCCCCATAGCCCTTCTCCTTCAAGCAAATTCAGCACAAAAGGCCTCTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS-3UTR CAA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCACCACTCTTACTCCTTTaGGATTTTGATTTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPPLLLL*DFDLPS
Trigger: GGAAGGCAAATCAAAATCCAAAAGGAGTAAGAGTGG...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGGTCCCTGGAGTGGGTTaGCTAGTGTCTTTGCCACTC +
Preference number: 5 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMVPGVG*LVSLPL
Trigger: GAGTGGCAAAGACACTAGCAAACCCACTCCAGGGAC...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGGCAGGGCTGTTGGTTTaGACTGAGCTGGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMAGLLV*TELASA
Trigger: AGCTGAAGCCAGCTCAGTCAAAACCAACAGCCCTGC...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCGTCAGGCTGGGGGCCTaGGTGAGAGTTGGTGGAATT +
Preference number: 5 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCVRLGA*VRVGGI
Trigger: AATTCCACCAACTCTCACCAAGGCCCCCAGCCTGAC...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCGTCGGTACCAGAGTATaGGATCCATCTCTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIVGTRV*DPSLPV
Trigger: GACAGGCAGAGATGGATCCAATACTCTGGTACCGAC...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 90 bp AGGTGGCTGGCATCACTCAGCTTCACTTTAAGGCCTTCAGGGGCCTaGCCCGGGAGTTTTGAAGAGTCATCTAACTTGGGAATGATGACT +
Preference number: 5 (lower is better)
Translates to: RWLASLSFTLRPSGA*PGSFEESSNLGMMT
Trigger: AGTCATCATTCCCAAGTTAGATGACTCTTCAAAACTCCCGGGCCAGGCCCCTGAAGGCCTTAAAGTGAAGCTGAGTGATGCCAGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AGGTCTGATGCCAATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGTTAGTTCCCAAAGGATaGAGCGCTGCCCCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: RSDANLYQQVSEVGKDKVLVPKG*SAAPGS
Trigger: TGAGCCTGGGGCAGCGCTCAATCCTTTGGGAACTAA...CACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGATTGGCATCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGGCCACATCACATGTGTaGACCCCAACTGATCGGGTA +
Preference number: 5 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMATSHV*TPTDRV
Trigger: TACCCGATCAGTTGGGGTCAACACATGTGATGTGGC...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCATGGTACTTAAGTCCATaGATGTGCTTGTACTTCTTG +
Preference number: 5 (lower is better)
Translates to: KRGEARAQSKAPGLSQWPWYLSP*MCLYFL
Trigger: CAAGAAGTACAAGCACATCAATGGACTTAAGTACCA...TGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CTCACAGGCAGCTCAAGGCCATGTTGGGGCAGATGCCTTGGTCTTCCTTTCCAGTGTATGGGCATGAGCTaGGTGGTACTTAAGTCCATT +
Preference number: 5 (lower is better)
Translates to: LTGSSRPCWGRCLGLPFQCMGMS*VVLKSI
Trigger: AATGGACTTAAGTACCACCAAGCTCATGCCCATACA...CTGGAAAGGAAGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTGCCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCGAGACAGATGCACCGTaGCAGCTCCCAAGATCTGCA +
Preference number: 5 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCETDAP*QLPRSA
Trigger: TGCAGATCTTGGGAGCTGCAACGGTGCATCTGTCTC...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCGGAGTCAAGGCAGGGTaGACTGTGAAAGGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCGVKAG*TVKGSP
Trigger: GGGAGAACCTTTCACAGTCAACCCTGCCTTGACTCC...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGGACTGCATGTACATATaGGGACGCTGCTGGATGACC +
Preference number: 5 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMDCMYI*GRCWMT
Trigger: GGTCATCCAGCAGCGTCCCAATATGTACATGCAGTC...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTCCTGGCCCGGGAGTTTaGAAGAGTCATCTAACTTGG +
Preference number: 5 (lower is better)
Translates to: VASRAFISTEATIVITVAPGPGV*KSHLTW
Trigger: CCAAGTTAGATGACTCTTCAAAACTCCCGGGCCAGG...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCCGCTCATCCTCTGACTaGATGTCTGAGTACTTGGCA +
Preference number: 5 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIRSSSD*MSEYLA
Trigger: TGCCAAGTACTCAGACATCAAGTCAGAGGATGAGCG...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCCTTTCCTCCTTCAATTaGCGGTCCCGCTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCLSSFN*RSRSSF
Trigger: GAAGGAGGAGCGGGACCGCAAATTGAAGGAGGAAAG...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp ATGGCTGCTGTGCTGTCTTCAGACCTTACCCAGTGCTTGGGGGTGGGGGTCCCTGAGAAGTCTCCACATTaGAAGACCTTGTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: MAAVLSSDLTQCLGVGVPEKSPH*KTLFSQ
Trigger: TTGTGAAAACAAGGTCTTCAAATGTGGAGACTTCTC...AGGGACCCCCACCCCCAAGCACTGGGTAAGGTCTGAAGACAGCACAGCAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGGTCTTGGCCCTaGGTAGCAAATTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIWWSWP*VANFSS
Trigger: GCTGGAAAAATTTGCTACCAAGGGCCAAGACCACCA...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp ATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGGGAAGGTCTCAACCAAGGTCTGGCTCTATaGCCTAGGCTGGAGTCCAGT +
Preference number: 5 (lower is better)
Translates to: ISTNKCLRWAKTRWEGLNQGLAL*PRLESS
Trigger: ACTGGACTCCAGCCTAGGCAATAGAGCCAGACCTTG...GTTGAGACCTTCCCACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS TCA 90 bp AGTCAGTGGGCAGCCATATCTGGCCACCTCTTACCTTTTCAGACTTaGCTTTCTTTAGCAGGCGACACTCATTCTCCCCTTCCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: SQWAAISGHLLPFQT*LSLAGDTHSPLPLA
Trigger: AGCCAGAGGAAGGGGAGAATGAGTGTCGCCTGCTAAAGAAAGTCAAGTCTGAAAAGGTAAGAGGTGGCCAGATATGGCTGCCCACTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS CCA 90 bp TTTCTTGCTAGCTGCCCCCTCACTTGGAGTGAACAGGGAAGTCCCTaGAGTGGGTTTGCTAGTGTCTTTGCCACTCTTACTCCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: FLASCPLTWSEQGSP*SGFASVFATLTPFG
Trigger: TCCAAAAGGAGTAAGAGTGGCAAAGACACTAGCAAACCCACTCCAGGGACTTCCCTGTTCACTCCAAGTGAGGGGGCAGCTAGCAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CCA 90 bp TTAGTCCAGGGCAGTTCTGACTGGCAGTCAGTGGGCAGCCATATCTaGCCACCTCTTACCTTTTCAGACTTGACTTTCTTTAGCAGGCGA +
Preference number: 5 (lower is better)
Translates to: LVQGSSDWQSVGSHI*PPLTFSDLTFFSRR
Trigger: TCGCCTGCTAAAGAAAGTCAAGTCTGAAAAGGTAAGAGGTGGCCAGATATGGCTGCCCACTGACTGCCAGTCAGAACTGCCCTGGACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS CCA 90 bp ATTACCCACACACTAATGAGCCTCCCACAGAGTACACATAGTATTTaGCAGTTAGTCCAGGGCAGTTCTGACTGGCAGTCAGTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: ITHTLMSLPQSTHSI*QLVQGSSDWQSVGS
Trigger: GCTGCCCACTGACTGCCAGTCAGAACTGCCCTGGACTAACTGCCAAATACTATGTGTACTCTGTGGGAGGCTCATTAGTGTGTGGGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAAAGTGTGGCCACAGCATaGGGAGCCGGTATCCCCACC +
Preference number: 5 (lower is better)
Translates to: VLVDRGIGLYISVASNEESVATA*GAGIPT
Trigger: GGTGGGGATACCGGCTCCCAATGCTGTGGCCACACT...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGACAGGTGTATTACTGTaGGGACGCATGCGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMTGVLL*GRMRLP
Trigger: AGGCAAACGCATGCGTCCCAACAGTAATACACCTGT...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGTTCTTTTTCTTGTCCTaGGCTGGAGTCAAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMFFFLS*AGVKAG
Trigger: CCCTGCCTTGACTCCAGCCAAGGACAAGAAAAAGAA...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCGAGTATGCAGGGCTGTaGGTTTTGACTGAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCEYAGL*VLTELA
Trigger: AGCCAGCTCAGTCAAAACCAACAGCCCTGCATACTC...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCGTTCCTCATCCCTTTTaGTCTTCAGGGCCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCVPHPF*SSGPGS
Trigger: AGAGCCAGGCCCTGAAGACAAAAAGGGATGAGGAAC...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAAGCAGCAGGACTTAGTGGGGACGCAGGTTCTACTTCACAGACGTCATTCATGTCACCACCTGAGACCTaGCTGCCATATGGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: EAAGLSGDAGSTSQTSFMSPPET*LPYGEK
Trigger: TTTTTCCCCATATGGCAGCAAGGTCTCAGGTGGTGA...CATGAATGACGTCTGTGAAGTAGAACCTGCGTCCCCACTAAGTCCTGCTGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGACTTTATCCGGGCACTaGGTGTCATTCTCACCTCCT +
Preference number: 5 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMTLSGH*VSFSPP
Trigger: AGGAGGTGAGAATGACACCAAGTGCCCGGATAAAGT...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCGTTGGGGCAGATGCCTaGGTCTTCCTTTCCAGGCTA +
Preference number: 5 (lower is better)
Translates to: WLINRLGLVVLALGSKFFVGADA*VFLSRL
Trigger: TAGCCTGGAAAGGAAGACCAAGGCATCTGCCCCAAC...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTAGGGTTCCAGGGTCCTaGGAAATCAACTACTACTGG +
Preference number: 5 (lower is better)
Translates to: VASRAFISTEATIVITVARVPGS*EINYYW
Trigger: CCAGTAGTAGTTGATTTCCAAGGACCCTGGAACCCT...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 90 bp CAGAGTACACATAGTATTTGGCAGTTAGTCCAGGGCAGTTCTGACTaGCAGTCAGTGGGCAGCCATATCTGGCCACCTCTTACCTTTTCA +
Preference number: 5 (lower is better)
Translates to: QSTHSIWQLVQGSSD*QSVGSHIWPPLTFS
Trigger: TGAAAAGGTAAGAGGTGGCCAGATATGGCTGCCCACTGACTGCCAGTCAGAACTGCCCTGGACTAACTGCCAAATACTATGTGTACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCACTGTTGGGCATGGCTaGTGCCACTGTGGCGGTCAA +
Preference number: 5 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGTVGHG*CHCGGQ
Trigger: TTGACCGCCACAGTGGCACAAGCCATGCCCAACAGT...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTAAGATGTCCAGGGCTTaGGACTCTGAGCTGGATTTA +
Preference number: 5 (lower is better)
Translates to: VASRAFISTEATIVITVAKMSRA*DSELDL
Trigger: TAAATCCAGCTCAGAGTCCAAAGCCCTGGACATCTT...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCAATTCAGTCACCCTCTaGGTTGGGGTGACTCAGGTG +
Preference number: 5 (lower is better)
Translates to: WLINRLGLVVLALGSKFFNSVTL*VGVTQV
Trigger: CACCTGAGTCACCCCAACCAAGAGGGTGACTGAATT...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAGGAAGATATCAGATGGCTAGATGACAGGACATCTCCAAGAACTGCTGGGTGCTTTTCCAGCCTTTGTTaGTGGGGTGGGATAGGATGG +
Preference number: 5 (lower is better)
Translates to: EEDIRWLDDRTSPRTAGCFSSLC*WGGIGW
Trigger: CCATCCTATCCCACCCCACAAACAAAGGCTGGAAAA...GCACCCAGCAGTTCTTGGAGATGTCCTGTCATCTAGCCATCTGATATCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GGAAAGGCACCCTCAGGACCAGACTGTCCAAAAGGGTTGAGGGAACAGGGGAAGGGGGAATCCTCTAATTaGGAAGAAAACCACATTATC +
Preference number: 5 (lower is better)
Translates to: GKAPSGPDCPKGLREQGKGESSN*EENHII
Trigger: GATAATGTGGTTTTCTTCCAAATTAGAGGATTCCCC...CTTCCCCTGTTCCCTCAACCCTTTTGGACAGTCTGGTCCTGAGGGTGCCTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp GGAAAGGCACCCTCAGGACCAGACTGTCCAAAAGGGTTGAGGGAACAGGGGAAGACTGGGCTTAGAAGGTaGCAACATAAGTACTCTAAA +
Preference number: 5 (lower is better)
Translates to: GKAPSGPDCPKGLREQGKTGLRR*QHKYSK
Trigger: TTTAGAGTACTTATGTTGCAACCTTCTAAGCCCAGT...CTTCCCCTGTTCCCTCAACCCTTTTGGACAGTCTGGTCCTGAGGGTGCCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS GCA 90 bp ACATCACATGTGTTGACCCCAACTGATCGGGTACGAACCATGATCTaGTCACAGGGAGATGAGATGTCATTGTTGACCACTGGCACCAAA +
Preference number: 5 (lower is better)
Translates to: TSHVLTPTDRVRTMI*SQGDEMSLLTTGTK
Trigger: TTTGGTGCCAGTGGTCAACAATGACATCTCATCTCCCTGTGAGCAGATCATGGTTCGTACCCGATCAGTTGGGGTCAACACATGTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000558680.5
CDS-3UTR CAA 90 bp ATCTCTACCAACAAGTGTCTGAGGTGGGCAAAGACAAGGTGGGAAGGTCTCAACATTCAAGGCTCTTCCTaGCCCCCAGCTTTCCTATTT +
Preference number: 5 (lower is better)
Translates to: ISTNKCLRWAKTRWEGLNIQGSS*PPAFLF
Trigger: AAATAGGAAAGCTGGGGGCAAGGAAGAGCCTTGAAT...GTTGAGACCTTCCCACCTTGTCTTTGCCCACCTCAGACACTTGTTGGTAGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp CTGCAGGCACCTGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTACTGGGGTCACAAACTaGATGTTGTCTGGTAGTGTG +
Preference number: 5 (lower is better)
Translates to: LQAPVLPSQAEGKVSLHCTGVTN*MLSGSV
Trigger: CACACTACCAGACAACATCAAGTTTGTGACCCCAGT...ACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACAGGTGCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp CTAATAGTTGTGGGAGATACCTGGCATGAAGCTACACCTTTAATGGCCAATCTCGTCCCTGGAGTGGGTTaGCTAGTGTCTTTGCCACTC +
Preference number: 5 (lower is better)
Translates to: LIVVGDTWHEATPLMANLVPGVG*LVSLPL
Trigger: GAGTGGCAAAGACACTAGCAAACCCACTCCAGGGAC...GAGATTGGCCATTAAAGGTGTAGCTTCATGCCAGGTATCTCCCACAACTATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp GTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTAACTTCCTTTCCTTTAACCCCTGCACCTCTTTCTaGCTAGCTGCCCCCTCACTT +
Preference number: 5 (lower is better)
Translates to: VVSQKPLLCMVPNFLSFNPCTSF*LAAPSL
Trigger: AAGTGAGGGGGCAGCTAGCAAGAAAGAGGTGCAGGG...GTTAAAGGAAAGGAAGTTAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATACCAGGCCTCCAGCATaGGCACCATCTCCTGAGCGC +
Preference number: 5 (lower is better)
Translates to: NHVLVDRGIGLYISVASNTRPPA*APSPER
Trigger: GCGCTCAGGAGATGGTGCCAATGCTGGAGGCCTGGT...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAATTGTCGGCTTCAGCCTaGATGCTAGCCAGTCGGCTT +
Preference number: 5 (lower is better)
Translates to: QITSHGQWPLKQNMCYQELSASA*MLASRL
Trigger: AAGCCGACTGGCTAGCATCAAGGCTGAAGCCGACAA...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCGGTAGAGTGAGGGAGTaGAGCCTTGTTGGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGGRVRE*SLVGWQ
Trigger: TTGCCAGCCAACAAGGCTCAACTCCCTCACTCTACC...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCACTGGATTCAACAGCTaGCCATCAGCCAGGGAAAGT +
Preference number: 5 (lower is better)
Translates to: WLINRLGLVVLALGSKFFTGFNS*PSARES
Trigger: ACTTTCCCTGGCTGATGGCAAGCTGTTGAATCCAGT...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AATCACAGCCAGCACAGGATGAGCCAAGCTAGTAACCAGCTGGAACCTGACTCTAACCACGAGGAGACTTaGATTCCTAATAGTTGTGGG +
Preference number: 5 (lower is better)
Translates to: NHSQHRMSQASNQLEPDSNHEET*IPNSCG
Trigger: CCCACAACTATTAGGAATCAAAGTCTCCTCGTGGTT...AGAGTCAGGTTCCAGCTGGTTACTAGCTTGGCTCATCCTGTGCTGGCTGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp CACCTGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTTGGCAGCGAACAGGGGAAGGAATaGAGAAAGCAGGTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: HLSFQVKQKARYHYTVGSEQGKE*RKQVLA
Trigger: AGCAAGAACCTGCTTTCTCAATTCCTTCCCCTGTTC...GCTGCCAACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCGTCACAAACTTGATGTaGTCTGGTAGTGTGGCCACA +
Preference number: 5 (lower is better)
Translates to: WLINRLGLVVLALGSKFFVTNLM*SGSVAT
Trigger: TGTGGCCACACTACCAGACAACATCAAGTTTGTGAC...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AAGGGAATGAGCCACTGTATTATTAGTGGAAGAAACTCACAGACCTGCTACTGGTTCTCCTTCTCCTTTTaGGAACCGGCTACACTGCGG +
Preference number: 5 (lower is better)
Translates to: KGMSHCIISGRNSQTCYWFSFSF*EPATLR
Trigger: CCGCAGTGTAGCCGGTTCCAAAAAGGAGAAGGAGAA...CCAGTAGCAGGTCTGTGAGTTTCTTCCACTAATAATACAGTGGCTCATTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAAGCACCAAAAGGTGTATaGGCAGCACTGCTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: VLVDRGIGLYISVASNEEAPKGV*AALLVW
Trigger: CCACACCAGCAGTGCTGCCAATACACCTTTTGGTGC...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TCCTCCACATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCGAATCAAAGGCATCATaGCTTGTTTCATCCATCACT +
Preference number: 5 (lower is better)
Translates to: SSTCCQFPGCKALGRCRIESKAS*LVSSIT
Trigger: AGTGATGGATGAAACAAGCAATGATGCCTTTGATTC...GATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCATGTGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATTGCTTCCACTCTTCCTaGAGTGCTGCCTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: NHVLVDRGIGLYISVASNCFHSS*SAASRS
Trigger: GGAGCGGGAGGCAGCACTCAAGGAAGAGTGGAAGCA...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAATCCTTCCCATCTTCCTaGGGGACAGAGTCCTTACTC +
Preference number: 5 (lower is better)
Translates to: QITSHGQWPLKQNMCYQESFPSS*GTESLL
Trigger: GAGTAAGGACTCTGTCCCCAAGGAAGATGGGAAGGA...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GTTGCTTCCCGTGCCTTCATCTCCACAGAGGCCACAATAGTCATAACTGTGGCTGAAACACAGCTTATATaGGCCCACATGGAGGTTATA +
Preference number: 5 (lower is better)
Translates to: VASRAFISTEATIVITVAETQLI*AHMEVI
Trigger: TATAACCTCCATGTGGGCCAATATAAGCTGTGTTTC...AGCCACAGTTATGACTATTGTGGCCTCTGTGGAGATGAAGGCACGGGAAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGCAACTAGCTGCCCAGTaGCATCTTGGGGGCATCAGA +
Preference number: 5 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGQLAAQ*HLGGIR
Trigger: TCTGATGCCCCCAAGATGCAACTGGGCAGCTAGTTG...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGTCTGATCAAATACTCTaGACCCATAAACCCTTAGCC +
Preference number: 5 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMSDQIL*THKPLA
Trigger: GGCTAAGGGTTTATGGGTCAAGAGTATTTGATCAGA...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCGTATCCCCACCTCCTTaGAGCCTGACATTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGVSPPP*SLTFPV
Trigger: AACTGGAAATGTCAGGCTCAAAGGAGGTGGGGATAC...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CTTCGTAGATATGCCATGAAATTTAGCCCTTTGTTCTACCAGAGACCCAACAGCGTATCCCCACCTCCTTaGAGCCTGACATTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: LRRYAMKFSPLFYQRPNSVSPPP*SLTFPV
Trigger: AACTGGAAATGTCAGGCTCAAAGGAGGTGGGGATAC...GCTGTTGGGTCTCTGGTAGAACAAAGGGCTAAATTTCATGGCATATCTACGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAATTCTCCTTCTCCTTTTaGGAACCGGCTACACTGCGG +
Preference number: 5 (lower is better)
Translates to: VLVDRGIGLYISVASNEEFSFSF*EPATLR
Trigger: CCGCAGTGTAGCCGGTTCCAAAAAGGAGAAGGAGAA...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp ATGCTGCCAATTCCCAGGGTGCAAAGCACTAGGGAGATGCAGAATCTGGTGATGATGTCTGAAAGGGGTTaGTTTTTCCGCTTATTAGCT +
Preference number: 5 (lower is better)
Translates to: MLPIPRVQSTREMQNLVMMSERG*FFRLLA
Trigger: AGCTAATAAGCGGAAAAACAAACCCCTTTCAGACAT...CATCACCAGATTCTGCATCTCCCTAGTGCTTTGCACCCTGGGAATTGGCAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GAGAAGGAAATTTCATACATGTACATGTACAAGGCAGGAAAAGGGGATGAAGGGTTAGTACGGACACGCTaGCTCCCTTTGGAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: EKEISYMYMYKAGKGDEGLVRTR*LPLESS
Trigger: AGAGGACTCCAAAGGGAGCAAGCGTGTCCGTACTAA...CCCTTCATCCCCTTTTCCTGCCTTGTACATGTACATGTATGAAATTTCCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCTCATCAGAGCCATCATaGGATAAGGCCCCAAGGTCT +
Preference number: 5 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGSSEPS*DKAPRS
Trigger: AGACCTTGGGGCCTTATCCAATGATGGCTCTGATGA...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TGGCTCATAAACAGGCTTGGTCTGGTGGTCTTGGCCCTTGGTAGCAAATTTTTCCAAAGGCATCATTGCTaGTTTCATCCATCACTGAGG +
Preference number: 5 (lower is better)
Translates to: WLINRLGLVVLALGSKFFQRHHC*FHPSLR
Trigger: CCTCAGTGATGGATGAAACAAGCAATGATGCCTTTG...GAAAAATTTGCTACCAAGGGCCAAGACCACCAGACCAAGCCTGTTTATGAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAATCTGACGTGGGCAGCTaGCAGTCACTACTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: VLVDRGIGLYISVASNEESDVGS*QSLLVL
Trigger: AAGCACAAGTAGTGACTGCAAGCTGCCCACGTCAGA...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAACGGCCAAACAATGGTTaGGTTGGGCTGTGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: QITSHGQWPLKQNMCYQERPNNG*VGLCFR
Trigger: TCTGAAACACAGCCCAACCAAACCATTGTTTGGCCG...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TTCTGTTTGTTATCCCTACATAGAAACGTCCCAAACCACAGGCAAGCCCATTTCGCCCCAAACCGGAGATaGTTGTTTCTCAAAAACCGC +
Preference number: 5 (lower is better)
Translates to: FCLLSLHRNVPNHRQAHFAPNRR*LFLKNR
Trigger: GCGGTTTTTGAGAAACAACAATCTCCGGTTTGGGGC...GAAATGGGCTTGCCTGTGGTTTGGGACGTTTCTATGTAGGGATAACAAACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCCCCTGCACCTCTTTCTaGCTAGCTGCCCCCTCACTT +
Preference number: 5 (lower is better)
Translates to: NKATKSSSLSQYKEYKASPCTSF*LAAPSL
Trigger: AAGTGAGGGGGCAGCTAGCAAGAAAGAGGTGCAGGG...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCGCTTGCAGTCACTACTaGTGCTTTCCTTCCCATCTT +
Preference number: 5 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGACSHY*CFPSHL
Trigger: AAGATGGGAAGGAAAGCACAAGTAGTGACTGCAAGC...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCCAGCTCAAGGCCATGTaGGGGCAGATGCCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: NKATKSSSLSQYKEYKASQLKAM*GQMPWS
Trigger: AGACCAAGGCATCTGCCCCAACATGGCCTTGAGCTG...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAACTTGGTCTGGTGGTCTaGGCCCTTGGTAGCAAATTT +
Preference number: 5 (lower is better)
Translates to: VLVDRGIGLYISVASNEELGLVV*ALGSKF
Trigger: AAATTTGCTACCAAGGGCCAAGACCACCAGACCAAG...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CTTCGTAGATATGCCATGAAATTTAGCCCTTTGTTCTACCAGAGACCCAACAGCTACAATGAGTACCTCTaGCCCTCAAAATGTGCCCCT +
Preference number: 5 (lower is better)
Translates to: LRRYAMKFSPLFYQRPNSYNEYL*PSKCAP
Trigger: AGGGGCACATTTTGAGGGCAAGAGGTACTCATTGTA...GCTGTTGGGTCTCTGGTAGAACAAAGGGCTAAATTTCATGGCATATCTACGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp AATAAAGCTACCAAATCATCCTCACTTTCCCAGTACAAAGAGTATAAAGCTTCCCTCAGACCTGCCACATaGGTCAGTACATGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: NKATKSSSLSQYKEYKASLRPAT*VSTCPV
Trigger: CACTGGGCATGTACTGACCAATGTGGCAGGTCTGAG...GGAAGCTTTATACTCTTTGTACTGGGAAAGTGAGGATGATTTGGTAGCTTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GTACTCCTAAGCCTCTTTAAAACAGTATTATCCATCTGTACCCGAGAGAAAATACTCAGACCTGCCACATaGGTCAGTACATGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: VLLSLFKTVLSICTREKILRPAT*VSTCPV
Trigger: CACTGGGCATGTACTGACCAATGTGGCAGGTCTGAG...TATTTTCTCTCGGGTACAGATGGATAATACTGTTTTAAAGAGGCTTAGGAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAAACTGGGGTCACAAACTaGATGTTGTCTGGTAGTGTG +
Preference number: 5 (lower is better)
Translates to: VLVDRGIGLYISVASNEETGVTN*MLSGSV
Trigger: CACACTACCAGACAACATCAAGTTTGTGACCCCAGT...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CAAATAACCTCCCATGGCCAGTGGCCCCTCAAACAAAATATGTGTTACCAAGAAGGTTTGCTAGTGTCTTaGCCACTCTTACTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: QITSHGQWPLKQNMCYQEGLLVS*PLLLLL
Trigger: CAAAAGGAGTAAGAGTGGCAAAGACACTAGCAAACC...TTCTTGGTAACACATATTTTGTTTGAGGGGCCACTGGCCATGGGAGGTTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp TCCTGGGATGCCCAAGTAATTAAAACAAACAACAAAGGCCCAGAATTATGGGGCCCTTTTGTGCTGAATTaGCTTGAAGGAGAAGGGCTA +
Preference number: 5 (lower is better)
Translates to: SWDAQVIKTNNKGPELWGPFVLN*LEGEGL
Trigger: TAGCCCTTCTCCTTCAAGCAAATTCAGCACAAAAGG...GCCCCATAATTCTGGGCCTTTGTTGTTTGTTTTAATTACTTGGGCATCCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AGAGACCCAACAGCACCATTTATCCCATCAAGAACCGTACTCAATCTACATTATGGAGAAGCCCAGATGTaGCTAAGAGCTACAGATGTG +
Preference number: 5 (lower is better)
Translates to: RDPTAPFIPSRTVLNLHYGEAQM*LRATDV
Trigger: CACATCTGTAGCTCTTAGCAACATCTGGGCTTCTCC...ATAATGTAGATTGAGTACGGTTCTTGATGGGATAAATGGTGCTGTTGGGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp TGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTTGGCAGCTATTTATGGCAAGAGTTTCTaGAAGCCAGATGTAGGGAAC +
Preference number: 5 (lower is better)
Translates to: CPSKSSRRQGIITLLAAIYGKSF*KPDVGN
Trigger: GTTCCCTACATCTGGCTTCAAGAAACTCTTGCCATA...AATAGCTGCCAACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp CTAATAGTTGTGGGAGATACCTGGCATGAAGCTACACCTTTAATGGCCAATCTCCCACTCTTACTCCTTTaGGATTTTGATTTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: LIVVGDTWHEATPLMANLPLLLL*DFDLPS
Trigger: GGAAGGCAAATCAAAATCCAAAAGGAGTAAGAGTGG...GAGATTGGCCATTAAAGGTGTAGCTTCATGCCAGGTATCTCCCACAACTATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp ACTCAAGAAATCACCATTTCATTTCATAGGGTGCCCTCTTACCCTTCTAAGCGTTCTTTCACTCAGCACTaGTCAAGAATCTCCACAGCT +
Preference number: 5 (lower is better)
Translates to: TQEITISFHRVPSYPSKRSFTQH*SRISTA
Trigger: AGCTGTGGAGATTCTTGACAAGTGCTGAGTGAAAGA...ACGCTTAGAAGGGTAAGAGGGCACCCTATGAAATGAAATGGTGATTTCTTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp AAGGGAATGAGCCACTGTATTATTAGTGGAAGAAACTCACAGACCTGCTACTGGGGTATCATTACACTGTaGGCAGCTATTAAACCACGA +
Preference number: 5 (lower is better)
Translates to: KGMSHCIISGRNSQTCYWGIITL*AAIKPR
Trigger: TCGTGGTTTAATAGCTGCCAACAGTGTAATGATACC...CCAGTAGCAGGTCTGTGAGTTTCTTCCACTAATAATACAGTGGCTCATTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp AGAGACCCAACAGCACCATTTATCCCATCAAGAACCGTACTCAATCTACATTATCCAAACCGGAGATTGTaGTTTCTCAAAAACCGCTCC +
Preference number: 5 (lower is better)
Translates to: RDPTAPFIPSRTVLNLHYPNRRL*FLKNRS
Trigger: GGAGCGGTTTTTGAGAAACAACAATCTCCGGTTTGG...ATAATGTAGATTGAGTACGGTTCTTGATGGGATAAATGGTGCTGTTGGGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp TGTCCTTCCAAGTCAAGCAGAAGGCAAGGTATCATTACACTGTTGGCAGCTATTTTCAAATCTTCCTCATaGGCTAGTAGTCAACACTGC +
Preference number: 5 (lower is better)
Translates to: CPSKSSRRQGIITLLAAIFKSSS*ASSQHC
Trigger: GCAGTGTTGACTACTAGCCAATGAGGAAGATTTGAA...AATAGCTGCCAACAGTGTAATGATACCTTGCCTTCTGCTTGACTTGGAAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp AATCATGTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGGAGATGAGATGTCATaGTTGACCACTGGCACCAAA +
Preference number: 5 (lower is better)
Translates to: NHVLVDRGIGLYISVASNGDEMS*LTTGTK
Trigger: TTTGGTGCCAGTGGTCAACAATGACATCTCATCTCC...ATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTACATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp GTACTCCTAAGCCTCTTTAAAACAGTATTATCCATCTGTACCCGAGAGAAAATAGTCACAAACTTGATGTaGTCTGGTAGTGTGGCCACA +
Preference number: 5 (lower is better)
Translates to: VLLSLFKTVLSICTREKIVTNLM*SGSVAT
Trigger: TGTGGCCACACTACCAGACAACATCAAGTTTGTGAC...TATTTTCTCTCGGGTACAGATGGATAATACTGTTTTAAAGAGGCTTAGGAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS-3UTR CAA 90 bp GTACTTGTAGACAGAGGAATTGGGCTGTATATATCTGTGGCCTCAAATGAGGAACTAATAAGTAATGGCTaGGATGTGTTATTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: VLVDRGIGLYISVASNEELISNG*DVLFQG
Trigger: ACCCTGGAATAACACATCCAAGCCATTACTTATTAG...TTCCTCATTTGAGGCCACAGATATATACAGCCCAATTCCTCTGTCTACAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS-3UTR CAA 90 bp CCAGTAATTTCAATATTCAAATCTTCCTCATTGGCTAGTAGTCAACACTGCTACGGTTTGCTAGTGTCTTaGCCACTCTTACTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: PVISIFKSSSLASSQHCYGLLVS*PLLLLL
Trigger: CAAAAGGAGTAAGAGTGGCAAAGACACTAGCAAACC...GTAGCAGTGTTGACTACTAGCCAATGAGGAAGATTTGAATATTGAAATTACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS GCA 72 bp TGCTGGCAGGTGGGCGGTGCTCTGAAGAATTCTGGCTaGCCCGACGGCCTTTGCTATTGGCTCCTGCCCGGG +
Preference number: 6 (lower is better)
Translates to: CWQVGGALKNSG*PDGLCYWLLPG
Trigger: CCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACCGCCCACCTGCCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS GCA 72 bp GGTGGTGTGTGGACATCAGGCGCTGGGAAGGAGAGGTaGGGGGCCGGTCAACACTCCGTTCACCCCCACTTG +
Preference number: 6 (lower is better)
Translates to: GGVWTSGAGKER*GAGQHSVHPHL
Trigger: CAAGTGGGGGTGAACGGAGTGTTGACCGGCCCCGCACCTCTCCTTCCCAGCGCCTGATGTCCACACACCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 72 bp GAGGACACAGGCACATGGACACTTGGCCGGGGCTCCTaGCTCCCAAGGCGAGACTCCTCTGACGTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: EDTGTWTLGRGS*LPRRDSSDVGS
Trigger: GCTGCCCACGTCAGAGGAGTCTCGCCTTGGGAGCAAGGAGCCCCGGCCAAGTGTCCATGTGCCTGTGTCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 72 bp TGGGTCAGCCCCTGGCTCCTTGGCCTTGCCAGGTCCTaGTTTCACCAGGTCTGTCAGGCTGGGGGCCTTGGT +
Preference number: 6 (lower is better)
Translates to: WVSPWLLGLARS*FHQVCQAGGLG
Trigger: ACCAAGGCCCCCAGCCTGACAGACCTGGTGAAATCAGGACCTGGCAAGGCCAAGGAGCCAGGGGCTGACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 72 bp AGGACACAGGCACATGGACACTTGGCCGGGGCTCCTTaGTCCCAAGGCGAGACTCCTCTGACGTGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: RTQAHGHLAGAP*SQGETPLTWAA
Trigger: AGCTGCCCACGTCAGAGGAGTCTCGCCTTGGGAGCAAGGAGCCCCGGCCAAGTGTCCATGTGCCTGTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp GTGCTGCTGGCAGGTGGGCGGTGCTCTGAAGAATTCTaGCTGCCCCGACGGCCTTTGCTATTGGCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: VLLAGGRCSEEF*LPRRPLLLAPA
Trigger: GGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACCGCCCACCTGCCAGCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CCA 72 bp AAGTGGTGGTGGTGGTGGTGTGTGGACATCAGGCGCTaGGAAGGAGAGGTGCGGGGCCGGTCAACACTCCGT +
Preference number: 6 (lower is better)
Translates to: KWWWWWCVDIRR*EGEVRGRSTLR
Trigger: ACGGAGTGTTGACCGGCCCCGCACCTCTCCTTCCCAGCGCCTGATGTCCACACACCACCACCACCACCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp GCAATGAGTACCCCAAGTGGTGGTGGTGGTGGTGTGTaGACATCAGGCGCTGGGAAGGAGAGGTGCGGGGCC +
Preference number: 6 (lower is better)
Translates to: AMSTPSGGGGGV*TSGAGKERCGA
Trigger: GGCCCCGCACCTCTCCTTCCCAGCGCCTGATGTCCACACACCACCACCACCACCACTTGGGGTACTCATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 72 bp ACCGGCTACACTGCGGGATGCCTTAGCCGCCTTCTCTaGGCCCTTGGGAGCAATAGCAGCAACCAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: TGYTAGCLSRLL*ALGSNSSNQAS
Trigger: GGAGGCCTGGTTGCTGCTATTGCTCCCAAGGGCTCAGAGAAGGCGGCTAAGGCATCCCGCAGTGTAGCCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CAA 90 bp GCAGGTGGGCGGTGCTCTGAAGAATTCTGGCTGCCCCGACGGCCTTaGCTATTGGCTCCTGCCCGGGTTTTGCTGCTGTTACTGGTCCCT +
Preference number: 6 (lower is better)
Translates to: AGGRCSEEFWLPRRP*LLAPARVLLLLLVP
Trigger: AGGGACCAGTAACAGCAGCAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACCGCCCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS TCA 72 bp TGGCCGGGGCTCCTTGCTCCCAAGGCGAGACTCCTCTaGCGTGGGCAGCTTGCAGTCACTACTTGTGCTTTC +
Preference number: 6 (lower is better)
Translates to: WPGLLAPKARLL*RGQLAVTTCAF
Trigger: GAAAGCACAAGTAGTGACTGCAAGCTGCCCACGTCAGAGGAGTCTCGCCTTGGGAGCAAGGAGCCCCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 72 bp CTGATTTGGCTGGGTCAGCCCCTGGCTCCTTGGCCTTaGCAGGTCCTGATTTCACCAGGTCTGTCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: LIWLGQPLAPWP*QVLISPGLSGW
Trigger: CCAGCCTGACAGACCTGGTGAAATCAGGACCTGGCAAGGCCAAGGAGCCAGGGGCTGACCCAGCCAAATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp TTCTCAGACCTGCCACATTGGTCAGTACATGCCCAGTaGACAACATCATTGCGCGCGGCCGGTCCCGGGAGC +
Preference number: 6 (lower is better)
Translates to: FSDLPHWSVHAQ*TTSLRAAGPGS
Trigger: GCTCCCGGGACCGGCCGCGCGCAATGATGTTGTCCACTGGGCATGTACTGACCAATGTGGCAGGTCTGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS CAA 90 bp GAACCGGCTACACTGCGGGATGCCTTAGCCGCCTTCTCTGAGCCCTaGGGAGCAATAGCAGCAACCAGGCCTCCAGCATTGGCACCATCT +
Preference number: 6 (lower is better)
Translates to: EPATLRDALAAFSEP*GAIAATRPPALAPS
Trigger: AGATGGTGCCAATGCTGGAGGCCTGGTTGCTGCTATTGCTCCCAAGGGCTCAGAGAAGGCGGCTAAGGCATCCCGCAGTGTAGCCGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CAA 90 bp TTCTGGCTGCCCCGACGGCCTTTGCTATTGGCTCCTGCCCGGGTTTaGCTGCTGTTACTGGTCCCTTTGCTGTCAGAGGCTGTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: FWLPRRPLLLAPARV*LLLLVPLLSEAVAV
Trigger: GACAGCCACAGCCTCTGACAGCAAAGGGACCAGTAACAGCAGCAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CAA 90 bp GGGCGGTGCTCTGAAGAATTCTGGCTGCCCCGACGGCCTTTGCTATaGGCTCCTGCCCGGGTTTTGCTGCTGTTACTGGTCCCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: GRCSEEFWLPRRPLL*APARVLLLLLVPLL
Trigger: CAGCAAAGGGACCAGTAACAGCAGCAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS TCA 72 bp ACAGCTCCTGTATCCACCCCTGCACTTCCATCATACTaGCCACCCCGTCCTCCCAAGGGAACTGGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: TAPVSTPALPSY*PPRPPKGTGWR
Trigger: CCTCCAGCCAGTTCCCTTGGGAGGACGGGGTGGTCAGTATGATGGAAGTGCAGGGGTGGATACAGGAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS TCA 72 bp GGGTTCTACCTTTGTCCCAGGAAGGGGGCCAGTGGCTaGGCCCATGGAATTAGTACGGACACGCTTGCTCCC +
Preference number: 6 (lower is better)
Translates to: GFYLCPRKGASG*AHGISTDTLAP
Trigger: GGGAGCAAGCGTGTCCGTACTAATTCCATGGGCTCAGCCACTGGCCCCCTTCCTGGGACAAAGGTAGAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS GCA 72 bp TTGACATCCTCAGAAGTGCTGCTGGCAGGTGGGCGGTaGTCTGAAGAATTCTGGCTGCCCCGACGGCCTTTG +
Preference number: 6 (lower is better)
Translates to: LTSSEVLLAGGR*SEEFWLPRRPL
Trigger: CAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACCGCCCACCTGCCAGCAGCACTTCTGAGGATGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CCA 72 bp CCATCTCTGCCTGTCGACCACACTCAGCACCTGTCTTaGCCTCAGAGGCCTCCTTGCTTAGGTGGCTGGCAT +
Preference number: 6 (lower is better)
Translates to: PSLPVDHTQHLS*PQRPPCLGGWH
Trigger: ATGCCAGCCACCTAAGCAAGGAGGCCTCTGAGGCCAAGACAGGTGCTGAGTGTGGTCGACAGGCAGAGATGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp GGGGCTCCTTGCTCCCAAGGCGAGACTCCTCTGACGTaGGCAGCTTGCAGTCACTACTTGTGCTTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: GAPCSQGETPLT*AACSHYLCFPS
Trigger: GGAAGGAAAGCACAAGTAGTGACTGCAAGCTGCCCACGTCAGAGGAGTCTCGCCTTGGGAGCAAGGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp TGTGCTGGGAGCAATGAGTACCCCAAGTGGTGGTGGTaGTGGTGTGTGGACATCAGGCGCTGGGAAGGAGAG +
Preference number: 6 (lower is better)
Translates to: CAGSNEYPKWWW*WCVDIRRWEGE
Trigger: CTCTCCTTCCCAGCGCCTGATGTCCACACACCACCACCACCACCACTTGGGGTACTCATTGCTCCCAGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 72 bp ACACTGCGGGATGCCTTAGCCGCCTTCTCTGAGCCCTaGGGAGCAATAGCAGCAACCAGGCCTCCAGCATTG +
Preference number: 6 (lower is better)
Translates to: TLRDALAAFSEP*GAIAATRPPAL
Trigger: CAATGCTGGAGGCCTGGTTGCTGCTATTGCTCCCAAGGGCTCAGAGAAGGCGGCTAAGGCATCCCGCAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CAA 72 bp AGGGGCAGTTTCTGTCCAGAACAGTGGGTTCTACCTTaGTCCCAGGAAGGGGGCCAGTGGCTGAGCCCATGG +
Preference number: 6 (lower is better)
Translates to: RGSFCPEQWVLP*SQEGGQWLSPW
Trigger: CCATGGGCTCAGCCACTGGCCCCCTTCCTGGGACAAAGGTAGAACCCACTGTTCTGGACAGAAACTGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CAA 90 bp GGGCCCAAGCACTCAGGCTCTGTGGCCAGAGCCACATCACATGTGTaGACCCCAACTGATCGGGTACGAACCATGATCTGCTCACAGGGA +
Preference number: 6 (lower is better)
Translates to: GPKHSGSVARATSHV*TPTDRVRTMICSQG
Trigger: TCCCTGTGAGCAGATCATGGTTCGTACCCGATCAGTTGGGGTCAACACATGTGATGTGGCTCTGGCCACAGAGCCTGAGTGCTTGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000558680.5
CDS CAA 90 bp GAAAGGTTCTCCCATAACAGTGGGCTTGGGCTGAATGGGCTTGAGTaGGGGACTGTTGGGCATGGCTTGTGCCACTGTGGCGGTCAAGCC +
Preference number: 6 (lower is better)
Translates to: ERFSHNSGLGLNGLE*GTVGHGLCHCGGQA
Trigger: GGCTTGACCGCCACAGTGGCACAAGCCATGCCCAACAGTCCCCAACTCAAGCCCATTCAGCCCAAGCCCACTGTTATGGGAGAACCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 72 bp ATCCTCAGAAGTGCTGCTGGCAGGTGGGCGGTGCTCTaGAGAATTCTGGCTGCCCCGACGGCCTTTGCTATT +
Preference number: 6 (lower is better)
Translates to: ILRSAAGRWAVL*RILAAPTAFAI
Trigger: AATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACCGCCCACCTGCCAGCAGCACTTCTGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS TCA 72 bp ACAGGGACTGCATGTACATATTGGGACGCTGCTGGATaGCCGAGGGCTGCTGACTGGAACTGCTCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: TGTACTYWDAAG*PRAADWNCSAR
Trigger: CCGAGCTGAGCAGTTCCAGTCAGCAGCCCTCGGTCATCCAGCAGCGTCCCAATATGTACATGCAGTCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 72 bp GGTGCTCTGAAGAATTCTGGCTGCCCCGACGGCCTTTaGTATTGGCTCCTGCCCGGGTTTTGCTGCTGTTAC +
Preference number: 6 (lower is better)
Translates to: GALKNSGCPDGL*YWLLPGFCCCY
Trigger: GTAACAGCAGCAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS GCA 72 bp AGGCCCATCTCTGCCTTCTTGTCCACTCCCCGCTGCTaGTGCTCTAAGCTCTGGCGTTTCTGCTGTTCTTCG +
Preference number: 6 (lower is better)
Translates to: RPISAFLSTPRC*CSKLWRFCCSS
Trigger: CGAAGAACAGCAGAAACGCCAGAGCTTAGAGCAGCAGCAGCGGGGAGTGGACAAGAAGGCAGAGATGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 72 bp GGGGCCTTGGTGAGAGTTGGTGGAATTGACGGCTTTTaGTTCCACTCTTCCTTGAGTGCTGCCTCCCGCTCC +
Preference number: 6 (lower is better)
Translates to: GALVRVGGIDGF*FHSSLSAASRS
Trigger: GGAGCGGGAGGCAGCACTCAAGGAAGAGTGGAAGCAAAAGCCGTCAATTCCACCAACTCTCACCAAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 72 bp AGGAACCTGGGTAGTTCTGCATCATCACAGCAGGCATaGTCCGGTAGCTGGGGTGGTTGGGGTCGTAGGACT +
Preference number: 6 (lower is better)
Translates to: RNLGSSASSQQA*SGSWGGWGRRT
Trigger: AGTCCTACGACCCCAACCACCCCAGCTACCGGAGCATGCCTGCTGTGATGATGCAGAACTACCCAGGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp CCCCTGCACCTCTTTCTTGCTAGCTGCCCCCTCACTTaGAGTGAACAGGGAAGTCCCTGGAGTGGGTTTGCT +
Preference number: 6 (lower is better)
Translates to: PLHLFLASCPLT*SEQGSPWSGFA
Trigger: AGCAAACCCACTCCAGGGACTTCCCTGTTCACTCCAAGTGAGGGGGCAGCTAGCAAGAAAGAGGTGCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CCA 72 bp CTGAAGAATTCTGGCTGCCCCGACGGCCTTTGCTATTaGCTCCTGCCCGGGTTTTGCTGCTGTTACTGGTCC +
Preference number: 6 (lower is better)
Translates to: LKNSGCPDGLCY*LLPGFCCCYWS
Trigger: GGACCAGTAACAGCAGCAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CCA 72 bp TTGTCGGCTTCAGCCTTGATGCTAGCCAGTCGGCTTTaGTGGGGGTCTGATGAGCCATTTAGGAGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: LSASALMLASRL*WGSDEPFRSPS
Trigger: GGAGGGGCTCCTAAATGGCTCATCAGACCCCCACCAAAGCCGACTGGCTAGCATCAAGGCTGAAGCCGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp TCATCACAGCAGGCATGCTCCGGTAGCTGGGGTGGTTaGGGTCGTAGGACTGACTGTAGGAATAGCCGTGCA +
Preference number: 6 (lower is better)
Translates to: SSQQACSGSWGG*GRRTDCRNSRA
Trigger: TGCACGGCTATTCCTACAGTCAGTCCTACGACCCCAACCACCCCAGCTACCGGAGCATGCCTGCTGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp TACTGTGCTGGGAGCAATGAGTACCCCAAGTGGTGGTaGTGGTGGTGTGTGGACATCAGGCGCTGGGAAGGA +
Preference number: 6 (lower is better)
Translates to: YCAGSNEYPKWW*WWCVDIRRWEG
Trigger: TCCTTCCCAGCGCCTGATGTCCACACACCACCACCACCACCACTTGGGGTACTCATTGCTCCCAGCACAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 72 bp CCCATTCATCCCCACTGTCGTATGTCTCAACCGGGTTaGCATCCACTCCTTTCCCTCCGGAGGCTCCACTGC +
Preference number: 6 (lower is better)
Translates to: PIHPHCRMSQPG*HPLLSLRRLHC
Trigger: GCAGTGGAGCCTCCGGAGGGAAAGGAGTGGATGCAAACCCGGTTGAGACATACGACAGTGGGGATGAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CAA 72 bp CGGTGCTCTGAAGAATTCTGGCTGCCCCGACGGCCTTaGCTATTGGCTCCTGCCCGGGTTTTGCTGCTGTTA +
Preference number: 6 (lower is better)
Translates to: RCSEEFWLPRRP*LLAPARVLLLL
Trigger: TAACAGCAGCAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGAGCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CAA 72 bp TCCCATAACAGTGGGCTTGGGCTGAATGGGCTTGAGTaGGGGACTGTTGGGCATGGCTTGTGCCACTGTGGC +
Preference number: 6 (lower is better)
Translates to: SHNSGLGLNGLE*GTVGHGLCHCG
Trigger: GCCACAGTGGCACAAGCCATGCCCAACAGTCCCCAACTCAAGCCCATTCAGCCCAAGCCCACTGTTATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 72 bp ACATCCGGGGCTCTGCCTCCTGTCGGTACCAGAGTATaGGATCCATCTCTGCCTGTCGACCACACTCAGCAC +
Preference number: 6 (lower is better)
Translates to: TSGALPPVGTRV*DPSLPVDHTQH
Trigger: GTGCTGAGTGTGGTCGACAGGCAGAGATGGATCCAATACTCTGGTACCGACAGGAGGCAGAGCCCCGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 90 bp GCCTTGCCAGGTCCTGATTTCACCAGGTCTGTCAGGCTGGGGGCCTaGGTGAGAGTTGGTGGAATTGACGGCTTTTGCTTCCACTCTTCC +
Preference number: 6 (lower is better)
Translates to: ALPGPDFTRSVRLGA*VRVGGIDGFCFHSS
Trigger: GGAAGAGTGGAAGCAAAAGCCGTCAATTCCACCAACTCTCACCAAGGCCCCCAGCCTGACAGACCTGGTGAAATCAGGACCTGGCAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 90 bp GCCTGTCGACCACACTCAGCACCTGTCTTGGCCTCAGAGGCCTCCTaGCTTAGGTGGCTGGCATCACTCAGCTTCACTTTAAGGCCTTCA +
Preference number: 6 (lower is better)
Translates to: ACRPHSAPVLASEAS*LRWLASLSFTLRPS
Trigger: TGAAGGCCTTAAAGTGAAGCTGAGTGATGCCAGCCACCTAAGCAAGGAGGCCTCTGAGGCCAAGACAGGTGCTGAGTGTGGTCGACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 72 bp GGCATGCTGCTGCAAGATGTCCAGGGCTTTGGACTCTaGGCTGGATTTACAAGTCACACTGGGGCTGGCTCG +
Preference number: 6 (lower is better)
Translates to: GMLLQDVQGFGL*AGFTSHTGAGS
Trigger: CGAGCCAGCCCCAGTGTGACTTGTAAATCCAGCTCAGAGTCCAAAGCCCTGGACATCTTGCAGCAGCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 72 bp CCATTCATCCCCACTGTCGTATGTCTCAACCGGGTTTaGATCCACTCCTTTCCCTCCGGAGGCTCCACTGCT +
Preference number: 6 (lower is better)
Translates to: PFIPTVVCLNRV*IHSFPSGGSTA
Trigger: AGCAGTGGAGCCTCCGGAGGGAAAGGAGTGGATGCAAACCCGGTTGAGACATACGACAGTGGGGATGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS GCA 72 bp CCCATCTCTGCCTTCTTGTCCACTCCCCGCTGCTGCTaGTCTAAGCTCTGGCGTTTCTGCTGTTCTTCGTAC +
Preference number: 6 (lower is better)
Translates to: PISAFLSTPRCC*SKLWRFCCSSY
Trigger: GTACGAAGAACAGCAGAAACGCCAGAGCTTAGAGCAGCAGCAGCGGGGAGTGGACAAGAAGGCAGAGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 72 bp TTCAGGCCCATCTCTGCCTTCTTGTCCACTCCCCGCTaGTGCTGCTCTAAGCTCTGGCGTTTCTGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: FRPISAFLSTPR*CCSKLWRFCCS
Trigger: AGAACAGCAGAAACGCCAGAGCTTAGAGCAGCAGCAGCGGGGAGTGGACAAGAAGGCAGAGATGGGCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 72 bp TGCCTCCTGTCGGTACCAGAGTATTGGATCCATCTCTaGCTGTCGACCACACTCAGCACCTGTCTTGGCCTC +
Preference number: 6 (lower is better)
Translates to: CLLSVPEYWIHL*LSTTLSTCLGL
Trigger: GAGGCCAAGACAGGTGCTGAGTGTGGTCGACAGGCAGAGATGGATCCAATACTCTGGTACCGACAGGAGGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS GCA 72 bp AGCTATGTTCTCAGACCTGCCACATTGGTCAGTACATaGCCAGTGGACAACATCATTGCGCGCGGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: SYVLRPATLVST*PVDNIIARGRS
Trigger: GGACCGGCCGCGCGCAATGATGTTGTCCACTGGGCATGTACTGACCAATGTGGCAGGTCTGAGAACATAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS CCA 72 bp TCGGCTTCAGCCTTGATGCTAGCCAGTCGGCTTTGGTaGGGGTCTGATGAGCCATTTAGGAGCCCCTCCATT +
Preference number: 6 (lower is better)
Translates to: SASALMLASRLW*GSDEPFRSPSI
Trigger: AATGGAGGGGCTCCTAAATGGCTCATCAGACCCCCACCAAAGCCGACTGGCTAGCATCAAGGCTGAAGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp GCTGCTGCAAGATGTCCAGGGCTTTGGACTCTGAGCTaGATTTACAAGTCACACTGGGGCTGGCTCGTGCCT +
Preference number: 6 (lower is better)
Translates to: AAARCPGLWTLS*IYKSHWGWLVP
Trigger: AGGCACGAGCCAGCCCCAGTGTGACTTGTAAATCCAGCTCAGAGTCCAAAGCCCTGGACATCTTGCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp AAGTTGTACTGTGCTGGGAGCAATGAGTACCCCAAGTaGTGGTGGTGGTGGTGTGTGGACATCAGGCGCTGG +
Preference number: 6 (lower is better)
Translates to: KLYCAGSNEYPK*WWWWCVDIRRW
Trigger: CCAGCGCCTGATGTCCACACACCACCACCACCACCACTTGGGGTACTCATTGCTCCCAGCACAGTACAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 72 bp TCTGAAGAATTCTGGCTGCCCCGACGGCCTTTGCTATaGGCTCCTGCCCGGGTTTTGCTGCTGTTACTGGTC +
Preference number: 6 (lower is better)
Translates to: SEEFWLPRRPLL*APARVLLLLLV
Trigger: GACCAGTAACAGCAGCAAAACCCGGGCAGGAGCCAATAGCAAAGGCCGTCGGGGCAGCCAGAATTCTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CAA 90 bp CTCCAATGTCCCATTCATCCCCACTGTCGTATGTCTCAACCGGGTTaGCATCCACTCCTTTCCCTCCGGAGGCTCCACTGCTCAAGGACA +
Preference number: 6 (lower is better)
Translates to: LQCPIHPHCRMSQPG*HPLLSLRRLHCSRT
Trigger: TGTCCTTGAGCAGTGGAGCCTCCGGAGGGAAAGGAGTGGATGCAAACCCGGTTGAGACATACGACAGTGGGGATGAATGGGACATTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CAA 90 bp CACTCATTCTCCCCTTCCTCTGGCTCCGGTTTAGTTCCCAAAGGATaGAGCGCTGCCCCAGGCTCAATAGCTATACTCCCAAGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: HSFSPSSGSGLVPKG*SAAPGSIAILPSGS
Trigger: GGAGCCACTTGGGAGTATAGCTATTGAGCCTGGGGCAGCGCTCAATCCTTTGGGAACTAAACCGGAGCCAGAGGAAGGGGAGAATGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CAA 90 bp GGAAGGGGGCCAGTGGCTGAGCCCATGGAATTAGTACGGACACGCTaGCTCCCTTTGGAGTCCTCTGAGCTAGAATTCAGCTCCATGTCT +
Preference number: 6 (lower is better)
Translates to: GRGPVAEPMELVRTR*LPLESSELEFSSMS
Trigger: AGACATGGAGCTGAATTCTAGCTCAGAGGACTCCAAAGGGAGCAAGCGTGTCCGTACTAATTCCATGGGCTCAGCCACTGGCCCCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS TCA 72 bp CCTTCCCTTGAGGACCTGGCACTGGGGTCACAAACTTaGTGTTGTCTGGTAGTGTGGCCACAGCATTGGGAG +
Preference number: 6 (lower is better)
Translates to: PSLEDLALGSQT*CCLVVWPQHWE
Trigger: CTCCCAATGCTGTGGCCACACTACCAGACAACATCAAGTTTGTGACCCCAGTGCCAGGTCCTCAAGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS GCA 72 bp CTCTGGCTCCGGTTTAGTTCCCAAAGGATTGAGCGCTaGCCCAGGCTCAATAGCTATACTCCCAAGTGGCTC +
Preference number: 6 (lower is better)
Translates to: LWLRFSSQRIER*PRLNSYTPKWL
Trigger: GAGCCACTTGGGAGTATAGCTATTGAGCCTGGGGCAGCGCTCAATCCTTTGGGAACTAAACCGGAGCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CCA 72 bp GCACCTGTCTTGGCCTCAGAGGCCTCCTTGCTTAGGTaGCTGGCATCACTCAGCTTCACTTTAAGGCCTTCA +
Preference number: 6 (lower is better)
Translates to: APVLASEASLLR*LASLSFTLRPS
Trigger: TGAAGGCCTTAAAGTGAAGCTGAGTGATGCCAGCCACCTAAGCAAGGAGGCCTCTGAGGCCAAGACAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp AGTTCTGCATCATCACAGCAGGCATGCTCCGGTAGCTaGGGTGGTTGGGGTCGTAGGACTGACTGTAGGAAT +
Preference number: 6 (lower is better)
Translates to: SSASSQQACSGS*GGWGRRTDCRN
Trigger: ATTCCTACAGTCAGTCCTACGACCCCAACCACCCCAGCTACCGGAGCATGCCTGCTGTGATGATGCAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp GGGCTTTGGACTCTGAGCTGGATTTACAAGTCACACTaGGGCTGGCTCGTGCCTTGTCAGCATCTTCACCAC +
Preference number: 6 (lower is better)
Translates to: GLWTLSWIYKSH*GWLVPCQHLHH
Trigger: GTGGTGAAGATGCTGACAAGGCACGAGCCAGCCCCAGTGTGACTTGTAAATCCAGCTCAGAGTCCAAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp GACTTTATCCGGGCACTTGGTGTCATTCTCACCTCCTaGGGGGTGGGTAGAGTGAGGGAGTTGAGCCTTGTT +
Preference number: 6 (lower is better)
Translates to: DFIRALGVILTS*GVGRVRELSLV
Trigger: AACAAGGCTCAACTCCCTCACTCTACCCACCCCCCAGGAGGTGAGAATGACACCAAGTGCCCGGATAAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 72 bp TCCCCTTCCTCTGGCTCCGGTTTAGTTCCCAAAGGATaGAGCGCTGCCCCAGGCTCAATAGCTATACTCCCA +
Preference number: 6 (lower is better)
Translates to: SPSSGSGLVPKG*SAAPGSIAILP
Trigger: TGGGAGTATAGCTATTGAGCCTGGGGCAGCGCTCAATCCTTTGGGAACTAAACCGGAGCCAGAGGAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CAA 72 bp CCACACTCAGCACCTGTCTTGGCCTCAGAGGCCTCCTaGCTTAGGTGGCTGGCATCACTCAGCTTCACTTTA +
Preference number: 6 (lower is better)
Translates to: PHSAPVLASEAS*LRWLASLSFTL
Trigger: TAAAGTGAAGCTGAGTGATGCCAGCCACCTAAGCAAGGAGGCCTCTGAGGCCAAGACAGGTGCTGAGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 72 bp CTGGATTTACAAGTCACACTGGGGCTGGCTCGTGCCTaGTCAGCATCTTCACCACCTGAGACCTTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: LDLQVTLGLARA*SASSPPETLLP
Trigger: TGGCAGCAAGGTCTCAGGTGGTGAAGATGCTGACAAGGCACGAGCCAGCCCCAGTGTGACTTGTAAATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 90 bp TTGCTGTCAGAGGCTGTGGCTGTCTCATTGACAGGTGTATTACTGTaGGGACGCATGCGTTTGCCTCTACCCCGGCCATTGCGCATTTCC +
Preference number: 6 (lower is better)
Translates to: LLSEAVAVSLTGVLL*GRMRLPLPRPLRIS
Trigger: GGAAATGCGCAATGGCCGGGGTAGAGGCAAACGCATGCGTCCCAACAGTAATACACCTGTCAATGAGACAGCCACAGCCTCTGACAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CAA 90 bp GAGCGGGCAGGGGACAAGGAACCTTTTTGTGAGACAGATGCACCGTaGCAGCTCCCAAGATCTGCATGGAGAATAGGTTCCTCTCCGTAC +
Preference number: 6 (lower is better)
Translates to: ERAGDKEPFCETDAP*QLPRSAWRIGSSPY
Trigger: GTACGGAGAGGAACCTATTCTCCATGCAGATCTTGGGAGCTGCAACGGTGCATCTGTCTCACAAAAAGGTTCCTTGTCCCCTGCCCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CAA 90 bp GACTCTGAGCTGGATTTACAAGTCACACTGGGGCTGGCTCGTGCCTaGTCAGCATCTTCACCACCTGAGACCTTGCTGCCATATGGGGAA +
Preference number: 6 (lower is better)
Translates to: DSELDLQVTLGLARA*SASSPPETLLPYGE
Trigger: TTCCCCATATGGCAGCAAGGTCTCAGGTGGTGAAGATGCTGACAAGGCACGAGCCAGCCCCAGTGTGACTTGTAAATCCAGCTCAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 72 bp ACTGTGAAAGGTTCTCCCATAACAGTGGGCTTGGGCTaGATGGGCTTGAGTTGGGGACTGTTGGGCATGGCT +
Preference number: 6 (lower is better)
Translates to: TVKGSPITVGLG*MGLSWGLLGMA
Trigger: AGCCATGCCCAACAGTCCCCAACTCAAGCCCATTCAGCCCAAGCCCACTGTTATGGGAGAACCTTTCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 72 bp TACATATTGGGACGCTGCTGGATGACCGAGGGCTGCTaGCTGGAACTGCTCAGCTCGGGCTTCTTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: YILGRCWMTEGC*LELLSSGFFSS
Trigger: TGAAGAAAAGAAGCCCGAGCTGAGCAGTTCCAGTCAGCAGCCCTCGGTCATCCAGCAGCGTCCCAATATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 72 bp CTGATTTCACCAGGTCTGTCAGGCTGGGGGCCTTGGTaGGAGTTGGTGGAATTGACGGCTTTTGCTTCCACT +
Preference number: 6 (lower is better)
Translates to: LISPGLSGWGPW*ELVELTAFAST
Trigger: AGTGGAAGCAAAAGCCGTCAATTCCACCAACTCTCACCAAGGCCCCCAGCCTGACAGACCTGGTGAAATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp AGCTGCCCCCTCACTTGGAGTGAACAGGGAAGTCCCTaGAGTGGGTTTGCTAGTGTCTTTGCCACTCTTACT +
Preference number: 6 (lower is better)
Translates to: SCPLTWSEQGSP*SGFASVFATLT
Trigger: AGTAAGAGTGGCAAAGACACTAGCAAACCCACTCCAGGGACTTCCCTGTTCACTCCAAGTGAGGGGGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CCA 72 bp AGTGACTGGCATGCTGCTGCAAGATGTCCAGGGCTTTaGACTCTGAGCTGGATTTACAAGTCACACTGGGGC +
Preference number: 6 (lower is better)
Translates to: SDWHAAARCPGL*TLSWIYKSHWG
Trigger: GCCCCAGTGTGACTTGTAAATCCAGCTCAGAGTCCAAAGCCCTGGACATCTTGCAGCAGCATGCCAGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 72 bp ACAAACTTGATGTTGTCTGGTAGTGTGGCCACAGCATaGGGAGCCGGTATCCCCACCTCCTTTGAGCCTGAC +
Preference number: 6 (lower is better)
Translates to: TNLMLSGSVATA*GAGIPTSFEPD
Trigger: GTCAGGCTCAAAGGAGGTGGGGATACCGGCTCCCAATGCTGTGGCCACACTACCAGACAACATCAAGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CAA 72 bp CCAGTGGCTGAGCCCATGGAATTAGTACGGACACGCTaGCTCCCTTTGGAGTCCTCTGAGCTAGAATTCAGC +
Preference number: 6 (lower is better)
Translates to: PVAEPMELVRTR*LPLESSELEFS
Trigger: GCTGAATTCTAGCTCAGAGGACTCCAAAGGGAGCAAGCGTGTCCGTACTAATTCCATGGGCTCAGCCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CAA 90 bp ACTGGGGTCACAAACTTGATGTTGTCTGGTAGTGTGGCCACAGCATaGGGAGCCGGTATCCCCACCTCCTTTGAGCCTGACATTTCCAGT +
Preference number: 6 (lower is better)
Translates to: TGVTNLMLSGSVATA*GAGIPTSFEPDISS
Trigger: ACTGGAAATGTCAGGCTCAAAGGAGGTGGGGATACCGGCTCCCAATGCTGTGGCCACACTACCAGACAACATCAAGTTTGTGACCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CAA 90 bp CTGCTGTTACTGGTCCCTTTGCTGTCAGAGGCTGTGGCTGTCTCATaGACAGGTGTATTACTGTTGGGACGCATGCGTTTGCCTCTACCC +
Preference number: 6 (lower is better)
Translates to: LLLLVPLLSEAVAVS*TGVLLLGRMRLPLP
Trigger: GGGTAGAGGCAAACGCATGCGTCCCAACAGTAATACACCTGTCAATGAGACAGCCACAGCCTCTGACAGCAAAGGGACCAGTAACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CAA 90 bp CCCTCCATTTTCATCCCATCTCCTGAAGATTCCCTGAATGGGCTTTaGCCTTCCTCTGCTCGACACACCTTCCCAGGGGTCAGAGGACTT +
Preference number: 6 (lower is better)
Translates to: PSIFIPSPEDSLNGL*PSSARHTFPGVRGL
Trigger: AAGTCCTCTGACCCCTGGGAAGGTGTGTCGAGCAGAGGAAGGCAAAAGCCCATTCAGGGAATCTTCAGGAGATGGGATGAAAATGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 72 bp TGGTCCCTTTGCTGTCAGAGGCTGTGGCTGTCTCATTaGCAGGTGTATTACTGTTGGGACGCATGCGTTTGC +
Preference number: 6 (lower is better)
Translates to: WSLCCQRLWLSH*QVYYCWDACVC
Trigger: GCAAACGCATGCGTCCCAACAGTAATACACCTGTCAATGAGACAGCCACAGCCTCTGACAGCAAAGGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS GCA 72 bp ATCCCCACCTCCTTTGAGCCTGACATTTCCAGTTTCTaGTGGTCCTTTTCCAGATCGGCGTCCAGGTCAATG +
Preference number: 6 (lower is better)
Translates to: IPTSFEPDISSF*WSFSRSASRSM
Trigger: CATTGACCTGGACGCCGATCTGGAAAAGGACCAGCAGAAACTGGAAATGTCAGGCTCAAAGGAGGTGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS GCA 72 bp CTCGTGCCTTGTCAGCATCTTCACCACCTGAGACCTTaGTGCCATATGGGGAAAAAGAGTAGCTGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: LVPCQHLHHLRP*CHMGKKSSWKA
Trigger: TGCCTTCCAGCTACTCTTTTTCCCCATATGGCAGCAAGGTCTCAGGTGGTGAAGATGCTGACAAGGCACGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp GCATCACTCAGCTTCACTTTAAGGCCTTCAGGGGCCTaGCCCGGGAGTTTTGAAGAGTCATCTAACTTGGGA +
Preference number: 6 (lower is better)
Translates to: ASLSFTLRPSGA*PGSFEESSNLG
Trigger: TCCCAAGTTAGATGACTCTTCAAAACTCCCGGGCCAGGCCCCTGAAGGCCTTAAAGTGAAGCTGAGTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CCA 72 bp CATAGTATTTGGCAGTTAGTCCAGGGCAGTTCTGACTaGCAGTCAGTGGGCAGCCATATCTGGCCACCTCTT +
Preference number: 6 (lower is better)
Translates to: HSIWQLVQGSSD*QSVGSHIWPPL
Trigger: AAGAGGTGGCCAGATATGGCTGCCCACTGACTGCCAGTCAGAACTGCCCTGGACTAACTGCCAAATACTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS CAA 72 bp TTCTTGCTCTTAGATGAGCTGTTCTCCTTCTCCTTTTaGGAACCGGCTACACTGCGGGATGCCTTAGCCGCC +
Preference number: 6 (lower is better)
Translates to: FLLLDELFSFSF*EPATLRDALAA
Trigger: GGCGGCTAAGGCATCCCGCAGTGTAGCCGGTTCCAAAAAGGAGAAGGAGAACAGCTCATCTAAGAGCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CAA 72 bp TCATTGACAGGTGTATTACTGTTGGGACGCATGCGTTaGCCTCTACCCCGGCCATTGCGCATTTCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: SLTGVLLLGRMR*PLPRPLRISRS
Trigger: TGACCTGGAAATGCGCAATGGCCGGGGTAGAGGCAAACGCATGCGTCCCAACAGTAATACACCTGTCAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CAA 72 bp CTGGTCCCTTTGCTGTCAGAGGCTGTGGCTGTCTCATaGACAGGTGTATTACTGTTGGGACGCATGCGTTTG +
Preference number: 6 (lower is better)
Translates to: LVPLLSEAVAVS*TGVLLLGRMRL
Trigger: CAAACGCATGCGTCCCAACAGTAATACACCTGTCAATGAGACAGCCACAGCCTCTGACAGCAAAGGGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CAA 90 bp CTTCTCTCCTTCTTGCTCTTAGATGAGCTGTTCTCCTTCTCCTTTTaGGAACCGGCTACACTGCGGGATGCCTTAGCCGCCTTCTCTGAG +
Preference number: 6 (lower is better)
Translates to: LLSFLLLDELFSFSF*EPATLRDALAAFSE
Trigger: CTCAGAGAAGGCGGCTAAGGCATCCCGCAGTGTAGCCGGTTCCAAAAAGGAGAAGGAGAACAGCTCATCTAAGAGCAAGAAGGAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CAA 90 bp CGGGTACGAACCATGATCTGCTCACAGGGAGATGAGATGTCATTGTaGACCACTGGCACCAAAAGGTGTATTGGCAGCACTGCTGGTGTG +
Preference number: 6 (lower is better)
Translates to: RVRTMICSQGDEMSL*TTGTKRCIGSTAGV
Trigger: CACACCAGCAGTGCTGCCAATACACCTTTTGGTGCCAGTGGTCAACAATGACATCTCATCTCCCTGTGAGCAGATCATGGTTCGTACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000558680.5
CDS CAA 90 bp GATCGGGTACGAACCATGATCTGCTCACAGGGAGATGAGATGTCATaGTTGACCACTGGCACCAAAAGGTGTATTGGCAGCACTGCTGGT +
Preference number: 6 (lower is better)
Translates to: DRVRTMICSQGDEMS*LTTGTKRCIGSTAG
Trigger: ACCAGCAGTGCTGCCAATACACCTTTTGGTGCCAGTGGTCAACAATGACATCTCATCTCCCTGTGAGCAGATCATGGTTCGTACCCGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000558680.5
CDS CCA 72 bp GATGTCATTGTTGACCACTGGCACCAAAAGGTGTATTaGCAGCACTGCTGGTGTGGAAACAGGGGACTCCAT +
Preference number: 6 (lower is better)
Translates to: DVIVDHWHQKVY*QHCWCGNRGLH
Trigger: ATGGAGTCCCCTGTTTCCACACCAGCAGTGCTGCCAATACACCTTTTGGTGCCAGTGGTCAACAATGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000558680.5
CDS CAA 72 bp GGGGACAAGGAACCTTTTTGTGAGACAGATGCACCGTaGCAGCTCCCAAGATCTGCATGGAGAATAGGTTCC +
Preference number: 6 (lower is better)
Translates to: GDKEPFCETDAP*QLPRSAWRIGS
Trigger: GGAACCTATTCTCCATGCAGATCTTGGGAGCTGCAACGGTGCATCTGTCTCACAAAAAGGTTCCTTGTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CAA 72 bp TTGCAGTCACTACTTGTGCTTTCCTTCCCATCTTCCTaGGGGACAGAGTCCTTACTCCGACTCCTTTCCTCC +
Preference number: 6 (lower is better)
Translates to: LQSLLVLSFPSS*GTESLLRLLSS
Trigger: GGAGGAAAGGAGTCGGAGTAAGGACTCTGTCCCCAAGGAAGATGGGAAGGAAAGCACAAGTAGTGACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 90 bp TCTTTAACCAACTGTTCGGCGTCCTTTGATTTGACACTGTCTACCTaGCCCTCCCCATCCTCCCCAGCATCAGAGATGTCAGAGTATGCA +
Preference number: 6 (lower is better)
Translates to: SLTNCSASFDLTLST*PSPSSPASEMSEYA
Trigger: TGCATACTCTGACATCTCTGATGCTGGGGAGGATGGGGAGGGCAAGGTAGACAGTGTCAAATCAAAGGACGCCGAACAGTTGGTTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS TCA 72 bp TCCGCTTCCGGCTTGCTGTCATCATCTGTATGGGCATaGGCTTGGTGGTACTTAAGTCCATTGATGTGCTTG +
Preference number: 6 (lower is better)
Translates to: SASGLLSSSVWA*AWWYLSPLMCL
Trigger: CAAGCACATCAATGGACTTAAGTACCACCAAGCTCATGCCCATACAGATGATGACAGCAAGCCGGAAGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS GCA 72 bp GTGTTGACCCCAACTGATCGGGTACGAACCATGATCTaGTCACAGGGAGATGAGATGTCATTGTTGACCACT +
Preference number: 6 (lower is better)
Translates to: VLTPTDRVRTMI*SQGDEMSLLTT
Trigger: AGTGGTCAACAATGACATCTCATCTCCCTGTGAGCAGATCATGGTTCGTACCCGATCAGTTGGGGTCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000558680.5
CDS GCA 72 bp AGTCACAGAACCTTGGGGGTGCCCAATCATGTCGTGTaGAGTCAAGGAGTGTACCTACATATGTCTTGTTCC +
Preference number: 6 (lower is better)
Translates to: SHRTLGVPNHVV*SQGVYLHMSCS
Trigger: GGAACAAGACATATGTAGGTACACTCCTTGACTGCACACGACATGATTGGGCACCCCCAAGGTTCTGTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CCA 72 bp CCTTTTGTGCTGAATTTGCTTGAAGGAGAAGGGCTATaGGGCTCTACAAGTCGAACTTTGGGGGTAGCTGAG +
Preference number: 6 (lower is better)
Translates to: PFVLNLLEGEGL*GSTSRTLGVAE
Trigger: CTCAGCTACCCCCAAAGTTCGACTTGTAGAGCCCCATAGCCCTTCTCCTTCAAGCAAATTCAGCACAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000559364.1
CDS CCA 72 bp GGCAGTTCTGACTGGCAGTCAGTGGGCAGCCATATCTaGCCACCTCTTACCTTTTCAGACTTGACTTTCTTT +
Preference number: 6 (lower is better)
Translates to: GSSDWQSVGSHI*PPLTFSDLTFF
Trigger: AAAGAAAGTCAAGTCTGAAAAGGTAAGAGGTGGCCAGATATGGCTGCCCACTGACTGCCAGTCAGAACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS CAA 72 bp CGAACCATGATCTGCTCACAGGGAGATGAGATGTCATaGTTGACCACTGGCACCAAAAGGTGTATTGGCAGC +
Preference number: 6 (lower is better)
Translates to: RTMICSQGDEMS*LTTGTKRCIGS
Trigger: GCTGCCAATACACCTTTTGGTGCCAGTGGTCAACAATGACATCTCATCTCCCTGTGAGCAGATCATGGTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000558680.5
CDS GCA 72 bp GGTGTGGAAACAGGGGACTCCATTGAGCACCTATTATaGCCCAAACCGGAGATTGTTGTTTCTCAAAAACCG +
Preference number: 6 (lower is better)
Translates to: GVETGDSIEHLL*PKPEIVVSQKP
Trigger: CGGTTTTTGAGAAACAACAATCTCCGGTTTGGGGCATAATAGGTGCTCAATGGAGTCCCCTGTTTCCACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558680.5
CDS CCA 72 bp TTTTCAGCTTCAGCTATGTTCTCAGACCTGCCACATTaGTCAGTACATGCCCAGTGGACAACATCATTGCGC +
Preference number: 6 (lower is better)
Translates to: FSASAMFSDLPH*SVHAQWTTSLR
Trigger: GCGCAATGATGTTGTCCACTGGGCATGTACTGACCAATGTGGCAGGTCTGAGAACATAGCTGAAGCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS CAA 72 bp TCACTTGGAGTGAACAGGGAAGTCCCTGGAGTGGGTTaGCTAGTGTCTTTGCCACTCTTACTCCTTTTGGAT +
Preference number: 6 (lower is better)
Translates to: SLGVNREVPGVG*LVSLPLLLLLD
Trigger: ATCCAAAAGGAGTAAGAGTGGCAAAGACACTAGCAAACCCACTCCAGGGACTTCCCTGTTCACTCCAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS CAA 72 bp ACCATGATCTGCTCACAGGGAGATGAGATGTCATTGTaGACCACTGGCACCAAAAGGTGTATTGGCAGCACT +
Preference number: 6 (lower is better)
Translates to: TMICSQGDEMSL*TTGTKRCIGST
Trigger: AGTGCTGCCAATACACCTTTTGGTGCCAGTGGTCAACAATGACATCTCATCTCCCTGTGAGCAGATCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000558680.5
CDS CAA 72 bp TTCTTTTTCTTGTCCTTGGCTGGAGTCAAGGCAGGGTaGACTGTGAAAGGTTCTCCCATAACAGTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: FFFLSLAGVKAG*TVKGSPITVGL
Trigger: CAAGCCCACTGTTATGGGAGAACCTTTCACAGTCAACCCTGCCTTGACTCCAGCCAAGGACAAGAAAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 72 bp CCATTGAGCACCTATTATGCCCCAAACCGGAGATTGTaGTTTCTCAAAAACCGCTCCTCTGCATGGTTCCTA +
Preference number: 6 (lower is better)
Translates to: PLSTYYAPNRRL*FLKNRSSAWFL
Trigger: TAGGAACCATGCAGAGGAGCGGTTTTTGAGAAACAACAATCTCCGGTTTGGGGCATAATAGGTGCTCAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558680.5
CDS CAA 72 bp ACTCCATTGAGCACCTATTATGCCCCAAACCGGAGATaGTTGTTTCTCAAAAACCGCTCCTCTGCATGGTTC +
Preference number: 6 (lower is better)
Translates to: TPLSTYYAPNRR*LFLKNRSSAWF
Trigger: GAACCATGCAGAGGAGCGGTTTTTGAGAAACAACAATCTCCGGTTTGGGGCATAATAGGTGCTCAATGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558680.5
CDS GCA 72 bp CTTTCCTATTTTCAGCTTCAGCTATGTTCTCAGACCTaGCACATTGGTCAGTACATGCCCAGTGGACAACAT +
Preference number: 6 (lower is better)
Translates to: LSYFQLQLCSQT*HIGQYMPSGQH
Trigger: ATGTTGTCCACTGGGCATGTACTGACCAATGTGGCAGGTCTGAGAACATAGCTGAAGCTGAAAATAGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326648.4
ENST00000416172.1
CDS TCA 72 bp TGGAGAATAGTAACTCTCAAAGCCTTGGTAATATGGTaGGTCTTTGCTCTGAGGCTGAGGGGGAAAAAGAGT +
Preference number: 6 (lower is better)
Translates to: WRIVTLKALVIW*VFALRLRGKKS
Trigger: ACTCTTTTTCCCCCTCAGCCTCAGAGCAAAGACTCACCATATTACCAAGGCTTTGAGAGTTACTATTCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326648.4
CDS CAA 90 bp ATGTCCAGGCCTGCTGTAAATGAGTCTGTAGGGGAATCCTCTAATTaGGAAGAAAACCACATTATCATTACCAGCTGCTCTGACCTTGTA +
Preference number: 6 (lower is better)
Translates to: MSRPAVNESVGESSN*EENHIIITSCSDLV
Trigger: TACAAGGTCAGAGCAGCTGGTAATGATAATGTGGTTTTCTTCCAAATTAGAGGATTCCCCTACAGACTCATTTACAGCAGGCCTGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1
CDS CAA 72 bp CCTGCTGTAAATGAGTCTGTAGGGGAATCCTCTAATTaGGAAGAAAACCACATTATCATTACCAGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: PAVNESVGESSN*EENHIIITSCS
Trigger: AGAGCAGCTGGTAATGATAATGTGGTTTTCTTCCAAATTAGAGGATTCCCCTACAGACTCATTTACAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416172.1