RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF608 (Homo sapiens)

Ensembl gene IDs: ENSG00000168916

Ensembl transcript IDs: ENST00000306315.9, ENST00000503896.6, ENST00000504926.5, ENST00000505686.5, ENST00000509799.5, ENST00000511308.1, ENST00000512940.1, ENST00000513986.2, ENST00000613878.4

Found 827 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGTGCCGCTGGCCGAAGGGGGAGTGGCGATCCCTTTCCCTTTCTaGCTCCCGTTCCCGCTCAGCTGTAGCCTTTTCCACAGGAGCAGG +
Preference number: 1 (lower is better)
Translates to: QVPLAEGGVAIPFPF*LPFPLSCSLFHRSR
Trigger: CCTGCTCCTGTGGAAAAGGCTACAGCTGAGCGGGAACGGGAGGCAGAAAGGGAAAGGGATCGCCACTCCCCCTTCGGCCAGCGGCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR GCA 90 bp AGCCTTGAAAAGGGTCATATTGACCCGGGATTAGCGGGTAACCCATaGCAACGTGGGTGTGGTGGTGCGTGTGCAGGTGCCGCTGGCCGA +
Preference number: 1 (lower is better)
Translates to: SLEKGHIDPGLAGNP*QRGCGGACAGAAGR
Trigger: TCGGCCAGCGGCACCTGCACACGCACCACCACACCCACGTTGGCATGGGTTACCCGCTAATCCCGGGTCAATATGACCCTTTTCAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR GCA 90 bp TCTCCATTTGCGACTTTATCTTCTTTGTCCAGGAAACATTCCAGATaGAGATGCCTGGGCAGCCACCTGCTGAGAGGCAACAAGGGCAGC +
Preference number: 1 (lower is better)
Translates to: SPFATLSSLSRKHSR*RCLGSHLLRGNKGS
Trigger: GCTGCCCTTGTTGCCTCTCAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATGTTTCCTGGACAAAGAAGATAAAGTCGCAAATGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505686.5
3UTR CCA 90 bp AACTGTGCATTAGGACGGGAGAAACAGCCCGGTATGCAGGATGGCTaGGGTCGTACATCTGTGGGTAAGGATAAGCATGCAAGTACTGTA +
Preference number: 1 (lower is better)
Translates to: NCALGREKQPGMQDG*GRTSVGKDKHASTV
Trigger: TACAGTACTTGCATGCTTATCCTTACCCACAGATGTACGACCCCAGCCATCCTGCATACCGGGCTGTTTCTCCCGTCCTAATGCACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR CCA 90 bp TCAGCTGTAGCCTTTTCCACAGGAGCAGGAGACTTGCTGCGGTATTaGTTAGCATGCTGCTGGAGCAAATCCAGTGCTTTAGATTCAGTG +
Preference number: 1 (lower is better)
Translates to: SAVAFSTGAGDLLRY*LACCWSKSSALDSV
Trigger: CACTGAATCTAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGTGGAAAAGGCTACAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR GCA 90 bp AGACTTGCTGCGGTATTGGTTAGCATGCTGCTGGAGCAAATCCAGTaGTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGT +
Preference number: 1 (lower is better)
Translates to: RLAAVLVSMLLEQIQ*FRFSGCFRVDARAG
Trigger: ACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR CCA 90 bp AAGGATAAGCATGCAAGTACTGTATGTATGACTGATGCTGACTCATaGGTGAGGAGACAGCCACTCTTGTTCCCCGAGAGTCCTTCCAGT +
Preference number: 1 (lower is better)
Translates to: KDKHASTVCMTDADS*VRRQPLLFPESPSS
Trigger: ACTGGAAGGACTCTCGGGGAACAAGAGTGGCTGTCTCCTCACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATGCTTATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR TCA 90 bp GGAGTCTTTCGATCATCATTTTTCAGCTTGCTCTCCTCCATTGATTaGGAATCAGGATGCTTGGCCTCTTTGGGCTCCTCTTTAATGCTT +
Preference number: 1 (lower is better)
Translates to: GVFRSSFFSLLSSID*ESGCLASLGSSLML
Trigger: AAGCATTAAAGAGGAGCCCAAAGAGGCCAAGCATCCTGATTCTCAATCAATGGAGGAGAGCAAGCTGAAAAATGATGATCGAAAGACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR TCA 90 bp GGTTTTTGCCTGCCATTAAGGCATTTCAAATTAACACCATGGAACTaGTGTCTGTATAAAGCGCTTCCCCATGTGATCCAGTCACATGAC +
Preference number: 1 (lower is better)
Translates to: GFCLPLRHFKLTPWN*CLYKALPHVIQSHD
Trigger: GTCATGTGACTGGATCACATGGGGAAGCGCTTTATACAGACATCAGTTCCATGGTGTTAATTTGAAATGCCTTAATGGCAGGCAAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR CCA 90 bp TGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATaGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACA +
Preference number: 1 (lower is better)
Translates to: CTKVSSSQLAFLRGL*EICEGYARFRHTDT
Trigger: TGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR CCA 90 bp ATGACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTaGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAA +
Preference number: 1 (lower is better)
Translates to: MTNTFLISFTEWFAT*QQTLCVRAWLLIQK
Trigger: TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTTGGGCAGCCACCTGCTaGGAGGCAACAAGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPWAATC*EATRAA
Trigger: TGCTGCCCTTGTTGCCTCTCAGCAGGTGGCTGCCCA...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR GCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTTTAGCGGGTAACCCATaGCAACGTGGGTGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPLAGNP*QRGCGG
Trigger: ACCACCACACCCACGTTGGCATGGGTTACCCGCTAA...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR-3UTR CCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTGAGTGGTTTGCGACGTaGCAGCAGACCCTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: CDVAADPVCASLVTDTKSEWFAT*QQTLCV
Trigger: CACACACAGGGTCTGCTGCCACGTCGCAAACCACTC...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAGGTATGCAGGATGGCTaGGGTCGTACATCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQGMQDG*GRTSVG
Trigger: ACCCACAGATGTACGACCCCAGCCATCCTGCATACC...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTGCCCGGTATGCAGGATaGCTGGGGTCGTACATCTGT +
Preference number: 2 (lower is better)
Translates to: CDVAADPVCASLVTDTKSARYAG*LGSYIC
Trigger: ACAGATGTACGACCCCAGCCATCCTGCATACCGGGC...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp CTTTTCCACAGGAGCAGGAGACTTGCTGCGGTATTGGTTAGCATGCTGCTGGAGGGTATGCAGGATGGCTaGGGTCGTACATCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: LFHRSRRLAAVLVSMLLEGMQDG*GRTSVG
Trigger: ACCCACAGATGTACGACCCCAGCCATCCTGCATACC...CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGTGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR-3UTR CCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCGTGTGCAGGTGCCGCTaGCCGAAGGGGGAGTGGCGA +
Preference number: 2 (lower is better)
Translates to: STNSDYRNILHWCVFNRSVCRCR*PKGEWR
Trigger: TCGCCACTCCCCCTTCGGCCAGCGGCACCTGCACAC...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR-3UTR TCA 90 bp GGACGGGAGAAACAGCCCGGTATGCAGGATGGCTGGGGTCGTACATCTGTGGGTTTAACACCATGGAACTaGTGTCTGTATAAAGCGCTT +
Preference number: 2 (lower is better)
Translates to: GREKQPGMQDGWGRTSVGLTPWN*CLYKAL
Trigger: AAGCGCTTTATACAGACATCAGTTCCATGGTGTTAA...ACCCACAGATGTACGACCCCAGCCATCCTGCATACCGGGCTGTTTCTCCCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp TCAGCTGTAGCCTTTTCCACAGGAGCAGGAGACTTGCTGCGGTATTGGTTAGCAACTGATGCTGACTCATaGGTGAGGAGACAGCCACTC +
Preference number: 2 (lower is better)
Translates to: SAVAFSTGAGDLLRYWLATDADS*VRRQPL
Trigger: GAGTGGCTGTCTCCTCACCCATGAGTCAGCATCAGT...TGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGTGGAAAAGGCTACAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR-3UTR TCA 90 bp CAGAGGTCAAGCAGCAGGAGACTTGCTGCGGTATTGGTTAGCATGCTGCTGGAGCTTGCTCTCCTCCATTaGTTGAGAATCAGGATGCTT +
Preference number: 2 (lower is better)
Translates to: QRSSSRRLAAVLVSMLLELALLH*LRIRML
Trigger: AAGCATCCTGATTCTCAATCAATGGAGGAGAGCAAG...CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTGCTTGACCTCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505686.5
3UTR-3UTR TCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAACAAGTACTGTATGTATaGCTGATGCTGACTCATGGG +
Preference number: 2 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQQVLYV*LMLTHG
Trigger: CCCATGAGTCAGCATCAGTCATACATACAGTACTTG...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR GCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTCGGTATTGGTTAGCATaGTGCTGGAGCAAATCCAGT +
Preference number: 2 (lower is better)
Translates to: CDVAADPVCASLVTDTKSRYWLA*CWSKSS
Trigger: ACTGGATTTGCTCCAGCAGCATGCTAACCAATACCG...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAATGGTTAGCATGCTGCTaGAGCAAATCCAGTGCTTTA +
Preference number: 2 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQWLACC*SKSSAL
Trigger: TAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCA...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR CAA 90 bp GTATGTATGACTGATGCTGACTCATGGGTGAGGAGACAGCCACTCTaGTTCCCCGAGAGTCCTTCCAGTTCACAGGAGTCTTTCGATCAT +
Preference number: 2 (lower is better)
Translates to: VCMTDADSWVRRQPL*FPESPSSSQESFDH
Trigger: ATGATCGAAAGACTCCTGTGAACTGGAAGGACTCTCGGGGAACAAGAGTGGCTGTCTCCTCACCCATGAGTCAGCATCAGTCATACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR CAA 90 bp CTCAGCTGTAGCCTTTTCCACAGGAGCAGGAGACTTGCTGCGGTATaGGTTAGCATGCTGCTGGAGCAAATCCAGTGCTTTAGATTCAGT +
Preference number: 2 (lower is better)
Translates to: LSCSLFHRSRRLAAV*VSMLLEQIQCFRFS
Trigger: ACTGAATCTAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGTGGAAAAGGCTACAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR-3UTR GCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGTACTGGCAACCCCATaGCTTCCAAAAGTACTTTTT +
Preference number: 2 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPVLATP*LPKVLF
Trigger: AAAAAGTACTTTTGGAAGGCATGGGGTTGCCAGTAC...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGAGTGGTTTGCGACGTaGCAGCAGACCCTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: FLRGLWEICEGYARFRHTEWFAT*QQTLCV
Trigger: CACACACAGGGTCTGCTGCCACGTCGCAAACCACTC...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATGCCCGGTATGCAGGATaGCTGGGGTCGTACATCTGT +
Preference number: 2 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHARYAG*LGSYIC
Trigger: ACAGATGTACGACCCCAGCCATCCTGCATACCGGGC...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTTAACACCATGGAACTaGTGTCTGTATAAAGCGCTT +
Preference number: 2 (lower is better)
Translates to: ISFTEWFATWQQTLCVRALTPWN*CLYKAL
Trigger: AAGCGCTTTATACAGACATCAGTTCCATGGTGTTAA...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR GCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCGAAATGACTGGTTTTTaGCTGCCATTAAGGCATTTC +
Preference number: 2 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAEMTGF*LPLRHF
Trigger: GAAATGCCTTAATGGCAGGCAAAAACCAGTCATTTC...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR GCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCCATTCCAGATGCAGATaGCTGGGCAGCCACCTGCTG +
Preference number: 2 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFHSRCR*LGSHLL
Trigger: CAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATG...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR-3UTR TCA 90 bp CTTTTCCACAGGAGCAGGAGACTTGCTGCGGTATTGGTTAGCATGCTGCTGGAGTTAACACCATGGAACTaGTGTCTGTATAAAGCGCTT +
Preference number: 2 (lower is better)
Translates to: LFHRSRRLAAVLVSMLLELTPWN*CLYKAL
Trigger: AAGCGCTTTATACAGACATCAGTTCCATGGTGTTAA...CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGTGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR-3UTR GCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCATTCCAGATGCAGATaGCTGGGCAGCCACCTGCTG +
Preference number: 2 (lower is better)
Translates to: TNTFLISFTEWFATWQQTHSRCR*LGSHLL
Trigger: CAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATG...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACACTGATGCTGACTCATaGGTGAGGAGACAGCCACTC +
Preference number: 2 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHTDADS*VRRQPL
Trigger: GAGTGGCTGTCTCCTCACCCATGAGTCAGCATCAGT...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR GCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACAGAAACAGCCCGGTATaGAGGATGGCTGGGGTCGTA +
Preference number: 2 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNRNSPV*RMAGVV
Trigger: TACGACCCCAGCCATCCTGCATACCGGGCTGTTTCT...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGTAAGTAGCCTTTTGTaGCTAACACTTTTTAACATG +
Preference number: 2 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPVSSLL*LTLFNM
Trigger: CATGTTAAAAAGTGTTAGCCACAAAAGGCTACTTAC...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTTTTCTGAGGGGCTTATaGGAAATATGTGAAGGATAT +
Preference number: 2 (lower is better)
Translates to: CDVAADPVCASLVTDTKSFLRGL*EICEGY
Trigger: ATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGGGGGTCGTACATCTGTaGGTAAGGATAAGCATGCAA +
Preference number: 2 (lower is better)
Translates to: FLISFTEWFATWQQTLCVGVVHL*VRISMQ
Trigger: TTGCATGCTTATCCTTACCCACAGATGTACGACCCC...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCGACTTGCTGCGGTATTaGTTAGCATGCTGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: STNSDYRNILHWCVFNRSDLLRY*LACCWS
Trigger: GCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTC...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR GCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGAAATGACTGGTTTTTaGCTGCCATTAAGGCATTTC +
Preference number: 2 (lower is better)
Translates to: LISFTEWFATWQQTLCVREMTGF*LPLRHF
Trigger: GAAATGCCTTAATGGCAGGCAAAAACCAGTCATTTC...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATAAGCGCTTCCCCATGTaGTCCAGTCACATGACAATG +
Preference number: 2 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYKRFPM*SSHMTM
Trigger: CATTGTCATGTGACTGGATCACATGGGGAAGCGCTT...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR GCA 90 bp GTTCCCCGAGAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCGAAATGACTGGTTTTTaGCTGCCATTAAGGCATTTC +
Preference number: 2 (lower is better)
Translates to: VPRESFQFTGVFRSSFFSEMTGF*LPLRHF
Trigger: GAAATGCCTTAATGGCAGGCAAAAACCAGTCATTTC...GCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTCTCGGGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCAGTTTTTGTGGTACTaGCAACCCCATGCCTTCCAA +
Preference number: 2 (lower is better)
Translates to: STNSDYRNILHWCVFNRSQFLWY*QPHAFQ
Trigger: TTGGAAGGCATGGGGTTGCCAGTACCACAAAAACTG...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCCAGTTTTTGTGGTACTaGCAACCCCATGCCTTCCAA +
Preference number: 2 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFQFLWY*QPHAFQ
Trigger: TTGGAAGGCATGGGGTTGCCAGTACCACAAAAACTG...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAATCACAGATGTCTCTaGTACGCAGGCTATTGGGTT +
Preference number: 2 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHNHRCL*YAGYWV
Trigger: AACCCAATAGCCTGCGTACCAGAGACATCTGTGATT...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCAATCACAGATGTCTCTaGTACGCAGGCTATTGGGTT +
Preference number: 2 (lower is better)
Translates to: VQTVTTGTFYTGASLTGANHRCL*YAGYWV
Trigger: AACCCAATAGCCTGCGTACCAGAGACATCTGTGATT...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTAATCACAGATGTCTCTaGTACGCAGGCTATTGGGTT +
Preference number: 2 (lower is better)
Translates to: FLRGLWEICEGYARFRHTNHRCL*YAGYWV
Trigger: AACCCAATAGCCTGCGTACCAGAGACATCTGTGATT...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTAGGATAATGAAATCCTaGAGAGAGATATGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: FLRGLWEICEGYARFRHTRIMKS*REICPR
Trigger: CCTGGGGCATATCTCTCTCCAGGATTTCATTATCCT...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATGTGATCCAGTCACATaGCAATGTACATGTCCAATC +
Preference number: 2 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGCDPVT*QCTCPI
Trigger: GATTGGACATGTACATTGTCATGTGACTGGATCACA...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTGTGATCCAGTCACATaGCAATGTACATGTCCAATC +
Preference number: 2 (lower is better)
Translates to: SQLAFLRGLWEICEGYARCDPVT*QCTCPI
Trigger: GATTGGACATGTACATTGTCATGTGACTGGATCACA...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACTGTGATCCAGTCACATaGCAATGTACATGTCCAATC +
Preference number: 2 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHCDPVT*QCTCPI
Trigger: GATTGGACATGTACATTGTCATGTGACTGGATCACA...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATTTAATTTCCTTTACTaGGTGGTTTGCGACGTGGCA +
Preference number: 2 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGFNFLY*VVCDVA
Trigger: TGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAA...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCTGTCTCTTCTCTCCCTaGCATCTTCCCATAAACAGG +
Preference number: 2 (lower is better)
Translates to: TNTFLISFTEWFATWQQTCLFSP*HLPINR
Trigger: CCTGTTTATGGGAAGATGTCAGGGAGAGAAGAGACA...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCCTGTGTGTGCGAGCCTaGTTACTGATACAAAAAGTA +
Preference number: 2 (lower is better)
Translates to: VQTVTTGTFYTGASLTGALCVRA*LLIQKV
Trigger: TACTTTTTGTATCAGTAACCAGGCTCGCACACACAG...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATCTGTGTGTGCGAGCCTaGTTACTGATACAAAAAGTA +
Preference number: 2 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHLCVRA*LLIQKV
Trigger: TACTTTTTGTATCAGTAACCAGGCTCGCACACACAG...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACAGGAACATTTTACACTaGTGCGTCTTTAACAGGAGC +
Preference number: 2 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHRNILH*CVFNRS
Trigger: GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCT...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTAGGAACATTTTACACTaGTGCGTCTTTAACAGGAGC +
Preference number: 2 (lower is better)
Translates to: FLRGLWEICEGYARFRHTRNILH*CVFNRS
Trigger: GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCT...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATGGTACGCAGGCTATTaGGTTATTTGCCATTCAAGA +
Preference number: 2 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGWYAGY*VICHSR
Trigger: TCTTGAATGGCAAATAACCCAATAGCCTGCGTACCA...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGTGTGATCCAGTCACATaGCAATGTACATGTCCAATC +
Preference number: 2 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWCDPVT*QCTCPI
Trigger: GATTGGACATGTACATTGTCATGTGACTGGATCACA...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGACTTATGGGAAATATGTaGAGGATATGCAAGGTTCAG +
Preference number: 2 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGLMGNM*RICKVQ
Trigger: CTGAACCTTGCATATCCTTCACATATTTCCCATAAG...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR GCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGAGAAATGACTGGTTTTTaGCTGCCATTAAGGCATTTC +
Preference number: 2 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGEMTGF*LPLRHF
Trigger: GAAATGCCTTAATGGCAGGCAAAAACCAGTCATTTC...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGAATTTCCTTTACTGAGTaGTTTGCGACGTGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGISFTE*FATWQQ
Trigger: CTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCTTTAATTTCCTTTACTaGGTGGTTTGCGACGTGGCA +
Preference number: 2 (lower is better)
Translates to: TNTFLISFTEWFATWQQTFNFLY*VVCDVA
Trigger: TGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAA...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCTTATGGGAAATATGTaGAGGATATGCAAGGTTCAG +
Preference number: 2 (lower is better)
Translates to: STNSDYRNILHWCVFNRSLMGNM*RICKVQ
Trigger: CTGAACCTTGCATATCCTTCACATATTTCCCATAAG...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATCTGTGTGTGCGAGCCTaGTTACTGATACAAAAAGTA +
Preference number: 2 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYLCVRA*LLIQKV
Trigger: TACTTTTTGTATCAGTAACCAGGCTCGCACACACAG...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATTTCTGAGGGGCTTATaGGAAATATGTGAAGGATAT +
Preference number: 2 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGFLRGL*EICEGY
Trigger: ATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGATTTAATTTCCTTTACTaGGTGGTTTGCGACGTGGCA +
Preference number: 2 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGFNFLY*VVCDVA
Trigger: TGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAA...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR CCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGAGTAAGTAGCCTTTTGTaGCTAACACTTTTTAACATG +
Preference number: 2 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGVSSLL*LTLFNM
Trigger: CATGTTAAAAAGTGTTAGCCACAAAAGGCTACTTAC...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGATTAACACCATGGAACTaGTGTCTGTATAAAGCGCTT +
Preference number: 2 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGLTPWN*CLYKAL
Trigger: AAGCGCTTTATACAGACATCAGTTCCATGGTGTTAA...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR TCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGACTTATGGGAAATATGTaGAGGATATGCAAGGTTCAG +
Preference number: 2 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGLMGNM*RICKVQ
Trigger: CTGAACCTTGCATATCCTTCACATATTTCCCATAAG...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR GCA 72 bp CCCATGCCAACGTGGGTGTGGTGGTGCGTGTGCAGGTaGCGCTGGCCGAAGGGGGAGTGGCGATCCCTTTCC +
Preference number: 3 (lower is better)
Translates to: PMPTWVWWCVCR*RWPKGEWRSLS
Trigger: GGAAAGGGATCGCCACTCCCCCTTCGGCCAGCGGCACCTGCACACGCACCACCACACCCACGTTGGCATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR CCA 72 bp CCAACGTGGGTGTGGTGGTGCGTGTGCAGGTGCCGCTaGCCGAAGGGGGAGTGGCGATCCCTTTCCCTTTCT +
Preference number: 3 (lower is better)
Translates to: PTWVWWCVCRCR*PKGEWRSLSLS
Trigger: AGAAAGGGAAAGGGATCGCCACTCCCCCTTCGGCCAGCGGCACCTGCACACGCACCACCACACCCACGTTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR GCA 72 bp CTGGCCGAAGGGGGAGTGGCGATCCCTTTCCCTTTCTaGCTCCCGTTCCCGCTCAGCTGTAGCCTTTTCCAC +
Preference number: 3 (lower is better)
Translates to: LAEGGVAIPFPF*LPFPLSCSLFH
Trigger: GTGGAAAAGGCTACAGCTGAGCGGGAACGGGAGGCAGAAAGGGAAAGGGATCGCCACTCCCCCTTCGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR-3UTR CAA 90 bp GGTAACCCATGCCAACGTGGGTGTGGTGGTGCGTGTGCAGGTGCCGCTGGCCGAGTGGTTGTTTTCGTGTaGACGCTAGGGCTGGTATTG +
Preference number: 3 (lower is better)
Translates to: GNPCQRGCGGACAGAAGRVVVFV*TLGLVL
Trigger: CAATACCAGCCCTAGCGTCAACACGAAAACAACCAC...TCGGCCAGCGGCACCTGCACACGCACCACCACACCCACGTTGGCATGGGTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR GCA 72 bp AAGGGTCATATTGACCCGGGATTAGCGGGTAACCCATaGCAACGTGGGTGTGGTGGTGCGTGTGCAGGTGCC +
Preference number: 3 (lower is better)
Translates to: KGHIDPGLAGNP*QRGCGGACAGA
Trigger: GGCACCTGCACACGCACCACCACACCCACGTTGGCATGGGTTACCCGCTAATCCCGGGTCAATATGACCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR-3UTR CAA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCAGGAGACAGCCACTCTaGTTCCCCGAGAGTCCTTCC +
Preference number: 3 (lower is better)
Translates to: ISFTEWFATWQQTLCVRARRQPL*FPESPS
Trigger: GGAAGGACTCTCGGGGAACAAGAGTGGCTGTCTCCT...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CAA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTAGGAGACAGCCACTCTaGTTCCCCGAGAGTCCTTCC +
Preference number: 3 (lower is better)
Translates to: CDVAADPVCASLVTDTKSRRQPL*FPESPS
Trigger: GGAAGGACTCTCGGGGAACAAGAGTGGCTGTCTCCT...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR CCA 72 bp TTAGGACGGGAGAAACAGCCCGGTATGCAGGATGGCTaGGGTCGTACATCTGTGGGTAAGGATAAGCATGCA +
Preference number: 3 (lower is better)
Translates to: LGREKQPGMQDG*GRTSVGKDKHA
Trigger: TGCATGCTTATCCTTACCCACAGATGTACGACCCCAGCCATCCTGCATACCGGGCTGTTTCTCCCGTCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CAA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAGGATGCTTGGCCTCTTaGGGCTCCTCTTTAATGCTT +
Preference number: 3 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQGCLAS*GSSLML
Trigger: AAGCATTAAAGAGGAGCCCAAAGAGGCCAAGCATCC...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CAA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTAGCAGAGGTCAAGCCTaGAAAAGGGTCATATTGACC +
Preference number: 3 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPSRGQA*KRVILT
Trigger: GGTCAATATGACCCTTTTCAAGGCTTGACCTCTGCT...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR-3UTR CAA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTCTGGTACGCAGGCTATaGGGTTATTTGCCATTCAAG +
Preference number: 3 (lower is better)
Translates to: CDVAADPVCASLVTDTKSLVRRL*GYLPFK
Trigger: CTTGAATGGCAAATAACCCAATAGCCTGCGTACCAG...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR CCA 72 bp AGCAGAGGTCAAGCAGCAGGAGACTTGCTGCGGTATTaGTTAGCATGCTGCTGGAGCAAATCCAGTGCTTTA +
Preference number: 3 (lower is better)
Translates to: SRGQAAGDLLRY*LACCWSKSSAL
Trigger: TAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTGCTTGACCTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505686.5
3UTR CCA 72 bp GCCTTTTCCACAGGAGCAGGAGACTTGCTGCGGTATTaGTTAGCATGCTGCTGGAGCAAATCCAGTGCTTTA +
Preference number: 3 (lower is better)
Translates to: AFSTGAGDLLRY*LACCWSKSSAL
Trigger: TAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGTGGAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR-3UTR CAA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAATATACAACACAGTTTTaGTGGTACTGGCAACCCCAT +
Preference number: 3 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQYTTQF*WYWQPH
Trigger: ATGGGGTTGCCAGTACCACAAAAACTGTGTTGTATA...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR GCA 72 bp GCAGCAGGAGACTTGCTGCGGTATTGGTTAGCATGCTaGTGGAGCAAATCCAGTGCTTTAGATTCAGTGGTT +
Preference number: 3 (lower is better)
Translates to: AAGDLLRYWLAC*WSKSSALDSVV
Trigger: AACCACTGAATCTAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505686.5
3UTR GCA 72 bp CAAGCAGCAGGAGACTTGCTGCGGTATTGGTTAGCATaGTGCTGGAGCAAATCCAGTGCTTTAGATTCAGTG +
Preference number: 3 (lower is better)
Translates to: QAAGDLLRYWLA*CWSKSSALDSV
Trigger: CACTGAATCTAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505686.5
3UTR GCA 72 bp GGAGCAGGAGACTTGCTGCGGTATTGGTTAGCATGCTaGTGGAGCAAATCCAGTGCTTTAGATTCAGTGGTT +
Preference number: 3 (lower is better)
Translates to: GAGDLLRYWLAC*WSKSSALDSVV
Trigger: AACCACTGAATCTAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR GCA 72 bp ACAGGAGCAGGAGACTTGCTGCGGTATTGGTTAGCATaGTGCTGGAGCAAATCCAGTGCTTTAGATTCAGTG +
Preference number: 3 (lower is better)
Translates to: TGAGDLLRYWLA*CWSKSSALDSV
Trigger: CACTGAATCTAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR-3UTR CAA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTTATACAACACAGTTTTaGTGGTACTGGCAACCCCAT +
Preference number: 3 (lower is better)
Translates to: CDVAADPVCASLVTDTKSYTTQF*WYWQPH
Trigger: ATGGGGTTGCCAGTACCACAAAAACTGTGTTGTATA...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR CCA 72 bp ACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTaGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTG +
Preference number: 3 (lower is better)
Translates to: TFLISFTEWFAT*QQTLCVRAWLL
Trigger: CAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR CCA 72 bp GCAGGAGACTTGCTGCGGTATTGGTTAGCATGCTGCTaGAGCAAATCCAGTGCTTTAGATTCAGTGGTTGTT +
Preference number: 3 (lower is better)
Translates to: AGDLLRYWLACC*SKSSALDSVVV
Trigger: AACAACCACTGAATCTAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CAA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCCTTTACTGAGTGGTTaGCGACGTGGCAGCAGACCC +
Preference number: 3 (lower is better)
Translates to: TNTFLISFTEWFATWQQTPLLSG*RRGSRP
Trigger: GGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGG...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CAA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACCCTTTACTGAGTGGTTaGCGACGTGGCAGCAGACCC +
Preference number: 3 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNPLLSG*RRGSRP
Trigger: GGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGG...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CAA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCAGACTTGCTGCGGTATaGGTTAGCATGCTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: VQTVTTGTFYTGASLTGARLAAV*VSMLLE
Trigger: CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCT...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CAA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGAACAGGAGCAGGAGACTaGCTGCGGTATTGGTTAGCA +
Preference number: 3 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGTGAGD*LRYWLA
Trigger: TGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGT...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR-3UTR CAA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGACCTTTACTGAGTGGTTaGCGACGTGGCAGCAGACCC +
Preference number: 3 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGPLLSG*RRGSRP
Trigger: GGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGG...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR CAA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATGTGGTTGTTTTCGTGTaGACGCTAGGGCTGGTATTG +
Preference number: 3 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHVVVFV*TLGLVL
Trigger: CAATACCAGCCCTAGCGTCAACACGAAAACAACCAC...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CAA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACCTGGTACGCAGGCTATaGGGTTATTTGCCATTCAAG +
Preference number: 3 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHLVRRL*GYLPFK
Trigger: CTTGAATGGCAAATAACCCAATAGCCTGCGTACCAG...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR-3UTR CAA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGGCTTGCTCTCCTCCATaGATTGAGAATCAGGATGCT +
Preference number: 3 (lower is better)
Translates to: SQLAFLRGLWEICEGYARACSPP*IENQDA
Trigger: AGCATCCTGATTCTCAATCAATGGAGGAGAGCAAGC...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR CCA 72 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATaGGAAATATGTGAAGGATATGCAAGGTTCAGGCAC +
Preference number: 3 (lower is better)
Translates to: VSSSQLAFLRGL*EICEGYARFRH
Trigger: GTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CAA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCGGATGCTTGGCCTCTTaGGGCTCCTCTTTAATGCTT +
Preference number: 3 (lower is better)
Translates to: TNTFLISFTEWFATWQQTGCLAS*GSSLML
Trigger: AAGCATTAAAGAGGAGCCCAAAGAGGCCAAGCATCC...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CAA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCACGCTAGGGCTGGTATaGACTTTCTCTGTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFTLGLV*TFSVSS
Trigger: AGAAGAGACAGAGAAAGTCAATACCAGCCCTAGCGT...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR TCA 72 bp CATGGAACTGATGTCTGTATAAAGCGCTTCCCCATGTaGTCCAGTCACATGACAATGTACATGTCCAATCTT +
Preference number: 3 (lower is better)
Translates to: HGTDVCIKRFPM*SSHMTMYMSNL
Trigger: AAGATTGGACATGTACATTGTCATGTGACTGGATCACATGGGGAAGCGCTTTATACAGACATCAGTTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR TCA 72 bp CTGCCATTAAGGCATTTCAAATTAACACCATGGAACTaGTGTCTGTATAAAGCGCTTCCCCATGTGATCCAG +
Preference number: 3 (lower is better)
Translates to: LPLRHFKLTPWN*CLYKALPHVIQ
Trigger: CTGGATCACATGGGGAAGCGCTTTATACAGACATCAGTTCCATGGTGTTAATTTGAAATGCCTTAATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR CCA 72 bp ACAAGTACAAACAGTGACTACAGGAACATTTTACACTaGTGCGTCTTTAACAGGAGCCACCAAATAGACATC +
Preference number: 3 (lower is better)
Translates to: TSTNSDYRNILH*CVFNRSHQIDI
Trigger: GATGTCTATTTGGTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
3UTR-3UTR CAA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATTTGTTATTCTCTTCTTaGTCCAGGAAACATTCCAGA +
Preference number: 3 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHLLFSS*SRKHSR
Trigger: TCTGGAATGTTTCCTGGACAAAGAAGAGAATAACAA...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAGCCTGCCCCCGCGGTaGCGGCAGAGGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQSLPPR*RQRCWC
Trigger: GCACCAGCACCTCTGCCGCCACCGCGGGGGCAGGCT...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTCCAGTGCCCCCGCAGTaGAAGGGGCTCGCGCCACCT +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPPVPPQ*KGLAPP
Trigger: AGGTGGCGCGAGCCCCTTCCACTGCGGGGGCACTGG...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAACCCCCGGAAGGGGCCTaGCTGCCACTGCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQPPEGA*LPLPFW
Trigger: CCAGAATGGCAGTGGCAGCCAGGCCCCTTCCGGGGG...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGTGTGCAGGTGCCGCTaGCCGAAGGGGGAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPVCRCR*PKGEWR
Trigger: TCGCCACTCCCCCTTCGGCCAGCGGCACCTGCACAC...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CATTCCAGATGCAGATGCCTGGGCAGCCACCTGCTGAGAGGCAACAAGGGCAGCATGCCAACGTGGGTGTaGTGGTGCGTGTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HSRCRCLGSHLLRGNKGSMPTWV*WCVCRC
Trigger: GCACCTGCACACGCACCACCACACCCACGTTGGCAT...GCTGCCCTTGTTGCCTCTCAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR GCA 90 bp CATTCCAGATGCAGATGCCTGGGCAGCCACCTGCTGAGAGGCAACAAGGGCAGCTATTGCTGTTTGGGTTaGCGCTGCCGCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HSRCRCLGSHLLRGNKGSYCCLG*RCRRCS
Trigger: TGAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATA...GCTGCCCTTGTTGCCTCTCAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCCGGCGGTGGTGGCGCTaGCACTGTAAACAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRARRWWR*HCKQGV
Trigger: GACCCCCTGTTTACAGTGCCAGCGCCACCACCGCCG...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GGACGGGAGAAACAGCCCGGTATGCAGGATGGCTGGGGTCGTACATCTGTGGGTGTAGAATCTGAGGCGTaGGACTGCTGGAAATCGGCG +
Preference number: 4 (lower is better)
Translates to: GREKQPGMQDGWGRTSVGVESEA*DCWKSA
Trigger: CGCCGATTTCCAGCAGTCTCACGCCTCAGATTCTAC...ACCCACAGATGTACGACCCCAGCCATCCTGCATACCGGGCTGTTTCTCCCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAATGGGCAGCCACCTGCTaGGAGGCAACAAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQWAATC*EATRAA
Trigger: TGCTGCCCTTGTTGCCTCTCAGCAGGTGGCTGCCCA...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAATTTCCCACAGGAGCCTaGCCCCGCGGTGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKFPTGA*PRGGGR
Trigger: TCTGCCGCCACCGCGGGGGCAGGCTCCTGTGGGAAA...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAGGGCCTGGCTGCCACTaGCATTCTGGTGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQGPGCH*HSGGPE
Trigger: TTCAGGGCCACCAGAATGGCAGTGGCAGCCAGGCCC...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGACGCTGCCACTCCCAGTaGCCCCGCAGTGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRRCHSQ*PRSGRG
Trigger: GCCCCTTCCACTGCGGGGGCACTGGGAGTGGCAGCG...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCGGAGGGGCCCAGTCGTaGTTGGTGCAGTCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAGGAQS*LVQSSR
Trigger: CCTACTGGACTGCACCAAGCACGACTGGGCCCCTCC...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp CAGAGGTCAAGCAGCAGGAGACTTGCTGCGGTATTGGTTAGCATGCTGCTGGAGGGAGGGGCCCAGTCGTaGTTGGTGCAGTCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: QRSSSRRLAAVLVSMLLEGGAQS*LVQSSR
Trigger: CCTACTGGACTGCACCAAGCACGACTGGGCCCCTCC...CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTGCTTGACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505686.5
CDS-3UTR GCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCCCCACTATTTCCAGCTaGAGGGGCACCGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAPTISS*RGTDLP
Trigger: GGGCAGGTCGGTGCCCCTGCAGCTGGAAATAGTGGG...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCCATCCTTATCCCGCTTaGCGCCTCGGCTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAHPYPA*RLGCSG
Trigger: GCCAGAGCAGCCGAGGCGCCAAGCGGGATAAGGATG...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp AGCCTTGAAAAGGGTCATATTGACCCGGGATTAGCGGGTAACCCATGCCAACGTCCCCCGGAAGGGGCCTaGCTGCCACTGCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: SLEKGHIDPGLAGNPCQRPPEGA*LPLPFW
Trigger: CCAGAATGGCAGTGGCAGCCAGGCCCCTTCCGGGGG...ACGTTGGCATGGGTTACCCGCTAATCCCGGGTCAATATGACCCTTTTCAAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR CCA 90 bp CTTTTCCACAGGAGCAGGAGACTTGCTGCGGTATTGGTTAGCATGCTGCTGGAGCGGCGGTGGTGGCGCTaGCACTGTAAACAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: LFHRSRRLAAVLVSMLLERRWWR*HCKQGV
Trigger: GACCCCCTGTTTACAGTGCCAGCGCCACCACCGCCG...CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGTGGAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR CCA 90 bp GGACGGGAGAAACAGCCCGGTATGCAGGATGGCTGGGGTCGTACATCTGTGGGTGGGCCCAAGACACTCTaGCTCTGTCACTACTCCAAC +
Preference number: 4 (lower is better)
Translates to: GREKQPGMQDGWGRTSVGGPKTL*LCHYSN
Trigger: GTTGGAGTAGTGACAGAGCCAGAGTGTCTTGGGCCC...ACCCACAGATGTACGACCCCAGCCATCCTGCATACCGGGCTGTTTCTCCCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GGACGGGAGAAACAGCCCGGTATGCAGGATGGCTGGGGTCGTACATCTGTGGGTATGATGCCATGTTCTTaGATCTGGGTCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GREKQPGMQDGWGRTSVGMMPCS*IWVLGG
Trigger: CCCTCCCAGGACCCAGATTCAAGAACATGGCATCAT...ACCCACAGATGTACGACCCCAGCCATCCTGCATACCGGGCTGTTTCTCCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp CAGAGGTCAAGCAGCAGGAGACTTGCTGCGGTATTGGTTAGCATGCTGCTGGAGCGCCCTTGGACTTCCTaGCTCTTGCCAGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QRSSSRRLAAVLVSMLLERPWTS*LLPVLL
Trigger: CAGCAGCACTGGCAAGAGGCAGGAAGTCCAAGGGCG...CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTGCTTGACCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505686.5
CDS-3UTR GCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCGCTTGGCGCCTCGGCTaGTCTGGCTTTTACCTGGCT +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAAWRLG*SGFYLA
Trigger: AGCCAGGTAAAAGCCAGAGCAGCCGAGGCGCCAAGC...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTTCCAGCACCAGGGGATaGCGGTGCCTTCAACTGGTC +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPSSTRG*RCLQLV
Trigger: GACCAGTTGAAGGCACCGGCATCCCCTGGTGCTGGA...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTCCCACTATTTCCAGCTaGAGGGGCACCGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSPTISS*RGTDLP
Trigger: GGGCAGGTCGGTGCCCCTGCAGCTGGAAATAGTGGG...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGATGGTGCGTGTGCAGGTaGCGCTGGCCGAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRWCVCR*RWPKGE
Trigger: CTCCCCCTTCGGCCAGCGGCACCTGCACACGCACCA...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TCAGCTGTAGCCTTTTCCACAGGAGCAGGAGACTTGCTGCGGTATTGGTTAGCAGTGTGGTGGTGCGTGTaGAGGTGCCGCTGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: SAVAFSTGAGDLLRYWLAVWWCV*RCRWPK
Trigger: CTTCGGCCAGCGGCACCTGCACACGCACCACCACAC...TGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGTGGAAAAGGCTACAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAATCTCCAGGGCGCCCTTaGACTTCCTGCCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQSPGRP*TSCLLP
Trigger: TGGCAAGAGGCAGGAAGTCCAAGGGCGCCCTGGAGA...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTCTCCAGGGCGCCCTTaGACTTCCTGCCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRASPGRP*TSCLLP
Trigger: TGGCAAGAGGCAGGAAGTCCAAGGGCGCCCTGGAGA...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGCGCCTCGGCTGCTCTaGCTTTTACCTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPAPRLL*LLPGFS
Trigger: GGAGAAGCCAGGTAAAAGCCAGAGCAGCCGAGGCGC...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCGCCATGCGGCTCTCCTaGGACTCCGACAGTCCATTT +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAAMRLS*DSDSPF
Trigger: AAATGGACTGTCGGAGTCTCAGGAGAGCCGCATGGC...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTTTGCTAACTTCCCCTaGAGCGGCGACGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAFANFP*SGDAAT
Trigger: AGTGGCAGCGTCGCCGCTGCAGGGGAAGTTAGCAAA...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCATCCCTTTCCCTTTCTaGCTCCCGTTCCCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAIPFPF*LPFPLS
Trigger: GCTGAGCGGGAACGGGAGGCAGAAAGGGAAAGGGAT...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTCATTCCAGATGCAGATaGCTGGGCAGCCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPHSRCR*LGSHLL
Trigger: CAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATG...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACAGCCTGCCCCCGCGGTaGCGGCAGAGGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHSLPPR*RQRCWC
Trigger: GCACCAGCACCTCTGCCGCCACCGCGGGGGCAGGCT...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GCTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGTATTGACTTTCAGCCTGCCCCCGCGGTaGCGGCAGAGGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ALDSVVVFVLTLGLVLTFSLPPR*RQRCWC
Trigger: GCACCAGCACCTCTGCCGCCACCGCGGGGGCAGGCT...GAAAGTCAATACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCGCCCGGTATGCAGGATaGCTGGGGTCGTACATCTGT +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAARYAG*LGSYIC
Trigger: ACAGATGTACGACCCCAGCCATCCTGCATACCGGGC...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTATGCCAACGTGGGTGTaGTGGTGCGTGTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSMPTWV*WCVCRC
Trigger: GCACCTGCACACGCACCACCACACCCACGTTGGCAT...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCGAGTGGTTTGCGACGTaGCAGCAGACCCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAEWFAT*QQTLCV
Trigger: CACACACAGGGTCTGCTGCCACGTCGCAAACCACTC...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCCCGCTGCTCACACTTTaGCCCAGCGCTGAATTCATG +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAPLLTL*PSAEFM
Trigger: CATGAATTCAGCGCTGGGTCAAAGTGTGAGCAGCGG...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp AGCCTTGAAAAGGGTCATATTGACCCGGGATTAGCGGGTAACCCATGCCAACGTCCATTCTGGTGGCCCTaGAGCAGGTCGTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SLEKGHIDPGLAGNPCQRPFWWP*SRSCLS
Trigger: GGACAAGCACGACCTGCTTCAGGGCCACCAGAATGG...ACGTTGGCATGGGTTACCCGCTAATCCCGGGTCAATATGACCCTTTTCAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR GCA 90 bp GAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCTTGCTCTCCTTTCCCACAGGAGCCTaGCCCCGCGGTGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: ESFQFTGVFRSSFFSLLSFPTGA*PRGGGR
Trigger: TCTGCCGCCACCGCGGGGGCAGGCTCCTGTGGGAAA...GGAGAGCAAGCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGCGCTGCCACTCCCAGTaGCCCCGCAGTGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARRCHSQ*PRSGRG
Trigger: GCCCCTTCCACTGCGGGGGCACTGGGAGTGGCAGCG...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACCGCTGCCACTCCCAGTaGCCCCGCAGTGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHRCHSQ*PRSGRG
Trigger: GCCCCTTCCACTGCGGGGGCACTGGGAGTGGCAGCG...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGCCCAGGTAAATCTTTaGTGGCCCCCTTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPAQVNL*WPPWSP
Trigger: AGGACTCCAAGGGGGCCAGCAAAGATTTACCTGGGC...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAGCCTGCCCCCGCGGTaGCGGCAGAGGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFSLPPR*RQRCWC
Trigger: GCACCAGCACCTCTGCCGCCACCGCGGGGGCAGGCT...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTGCTGGAAATCGGCGGTaGTGGCGCTGGCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSAGNRR*WRWHCK
Trigger: TTTACAGTGCCAGCGCCACCACCGCCGATTTCCAGC...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAACTCAGCAGCACAATTTaGGGGTGTCCTTCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQLSSTI*GCPSSA
Trigger: AGCGGACGAAGGACACCCCCAAATTGTGCTGCTGAG...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp CATTCCAGATGCAGATGCCTGGGCAGCCACCTGCTGAGAGGCAACAAGGGCAGCGGGGTCGTACATCTGTaGGTAAGGATAAGCATGCAA +
Preference number: 4 (lower is better)
Translates to: HSRCRCLGSHLLRGNKGSGVVHL*VRISMQ
Trigger: TTGCATGCTTATCCTTACCCACAGATGTACGACCCC...GCTGCCCTTGTTGCCTCTCAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTTATCGGCCTCAGCTTTaGTACTGGCCATGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSYRPQL*YWPCGS
Trigger: AGAGCCGCATGGCCAGTATCAAAGCTGAGGCCGATA...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTCAGGATGTCTTTGTGTaGTCACCGACTGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPQDVFV*SPTGAE
Trigger: CTCAGCACCAGTCGGTGATCACACAAAGACATCCTG...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp CATTCCAGATGCAGATGCCTGGGCAGCCACCTGCTGAGAGGCAACAAGGGCAGCCAAGTACTGTATGTATaGCTGATGCTGACTCATGGG +
Preference number: 4 (lower is better)
Translates to: HSRCRCLGSHLLRGNKGSQVLYV*LMLTHG
Trigger: CCCATGAGTCAGCATCAGTCATACATACAGTACTTG...GCTGCCCTTGTTGCCTCTCAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAATATTGCTGTTTGGGTTaGCGCTGCCGCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKYCCLG*RCRRCS
Trigger: TGAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATA...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGACGGTGGCGGCAGAGGTaGTGGTGCTGGTACTATTGC +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRRWRQR*WCWYYC
Trigger: GCAATAGTACCAGCACCAGCACCTCTGCCGCCACCG...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCTTGGCGCCTCGGCTaGTCTGGCTTTTACCTGGCT +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRAWRLG*SGFYLA
Trigger: AGCCAGGTAAAAGCCAGAGCAGCCGAGGCGCCAAGC...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp AGCCTTGAAAAGGGTCATATTGACCCGGGATTAGCGGGTAACCCATGCCAACGTTCGCGCCACCTCCATTaGTCTTGGCCCCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SLEKGHIDPGLAGNPCQRSRHLH*SWPQSH
Trigger: ATGGCTTTGGGGCCAAGAGCAATGGAGGTGGCGCGA...ACGTTGGCATGGGTTACCCGCTAATCCCGGGTCAATATGACCCTTTTCAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGGTGCCATTGGTGCCTaGCCGTTCACCAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKGAIGA*PFTKVL
Trigger: CAGCACTTTGGTGAACGGGCAGGCACCAATGGCACC...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTCAGAGGTGCCATTGGTaGCTGCCCGTTCACCAAAGT +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSQRCHW*LPVHQS
Trigger: ACTTTGGTGAACGGGCAGGCACCAATGGCACCTCTG...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTTCATACCCTCCGACCTaGTGTCAGAACCACCATCGT +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPSYPPT*CQNHHR
Trigger: ACGATGGTGGTTCTGACAGCAGGTCGGAGGGTATGA...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTAGAAACAGCCCGGTATaGAGGATGGCTGGGGTCGTA +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSRNSPV*RMAGVV
Trigger: TACGACCCCAGCCATCCTGCATACCGGGCTGTTTCT...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GGACGGGAGAAACAGCCCGGTATGCAGGATGGCTGGGGTCGTACATCTGTGGGTTATTGGTTAGCATGCTaGTGGAGCAAATCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GREKQPGMQDGWGRTSVGYWLAC*WSKSSA
Trigger: AGCACTGGATTTGCTCCAGCAGCATGCTAACCAATA...ACCCACAGATGTACGACCCCAGCCATCCTGCATACCGGGCTGTTTCTCCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACTGGTGCGTGTGCAGGTaGCGCTGGCCGAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHWCVCR*RWPKGE
Trigger: CTCCCCCTTCGGCCAGCGGCACCTGCACACGCACCA...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTAGGAAACATTCCAGATaGAGATGCCTGGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPRKHSR*RCLGSH
Trigger: GTGGCTGCCCAGGCATCTGCATCTGGAATGTTTCCT...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAACTCTCTGCCCCATTCTaGGTCAACACATGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQLSAPF*VNTCRG
Trigger: ACCTCTGCATGTGTTGACCCAGAATGGGGCAGAGAG...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAATATAGGCAGGGCTGGTaGCCATCAGAGACTTCTGGT +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQYRQGW*PSETSG
Trigger: ACCAGAAGTCTCTGATGGCCACCAGCCCTGCCTATA...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAACTGATGCTGACTCATaGGTGAGGAGACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQTDADS*VRRQPL
Trigger: GAGTGGCTGTCTCCTCACCCATGAGTCAGCATCAGT...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CAGAGGTCAAGCAGCAGGAGACTTGCTGCGGTATTGGTTAGCATGCTGCTGGAGACTGATGCTGACTCATaGGTGAGGAGACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: QRSSSRRLAAVLVSMLLETDADS*VRRQPL
Trigger: GAGTGGCTGTCTCCTCACCCATGAGTCAGCATCAGT...CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTGCTTGACCTCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505686.5
CDS-3UTR CCA 90 bp TGCAGGATGGCTGGGGTCGTACATCTGTGGGTAAGGATAAGCATGCAAGTACTGGCCCGGTATGCAGGATaGCTGGGGTCGTACATCTGT +
Preference number: 4 (lower is better)
Translates to: CRMAGVVHLWVRISMQVLARYAG*LGSYIC
Trigger: ACAGATGTACGACCCCAGCCATCCTGCATACCGGGC...CAGTACTTGCATGCTTATCCTTACCCACAGATGTACGACCCCAGCCATCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGTGTGCAGGTGCCGCTaGCCGAAGGGGGAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTVCRCR*PKGEWR
Trigger: TCGCCACTCCCCCTTCGGCCAGCGGCACCTGCACAC...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR CAA 72 bp ACTGATGCTGACTCATGGGTGAGGAGACAGCCACTCTaGTTCCCCGAGAGTCCTTCCAGTTCACAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: TDADSWVRRQPL*FPESPSSSQES
Trigger: AGACTCCTGTGAACTGGAAGGACTCTCGGGGAACAAGAGTGGCTGTCTCCTCACCCATGAGTCAGCATCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp CATGCAAGTACTGTATGTATGACTGATGCTGACTCATGGGTGAGGAGACAGCCACCATTCTGGTGGCCCTaGAGCAGGTCGTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: HASTVCMTDADSWVRRQPPFWWP*SRSCLS
Trigger: GGACAAGCACGACCTGCTTCAGGGCCACCAGAATGG...TGGCTGTCTCCTCACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATTCGTCCGCTGGCATTaGGGCTGCCCCGCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGFVRWH*GCPASL
Trigger: AAGGGAGGCGGGGCAGCCTCAATGCCAGCGGACGAA...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTGCTTGTCTTTGCAGCTaGACTCTCTGCCCCATTCTG +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSACLCS*TLCPIL
Trigger: CAGAATGGGGCAGAGAGTTCAGCTGCAAAGACAAGC...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTCTGGCCATAATAAAGTaGCTGAGCCAGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSLAIIK*LSQGRM
Trigger: CATCCTGCCCTGGCTCAGTCACTTTATTATGGCCAG...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGCTTCTGGAATTTGTaGGGACACGCTTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRACFWNL*GHAFQA
Trigger: AGCCTGGAAAGCGTGTCCGCACAAATTCCAGAAGCA...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAACCAGGGGATGCCGGTaGCTTCAACTGGTCATAAGC +
Preference number: 4 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKTRGCR*LQLVIS
Trigger: GCTTATGACCAGTTGAAGGCACCGGCATCCCCTGGT...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGCCCAGGTAAATCTTTaGTGGCCCCCTTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKAQVNL*WPPWSP
Trigger: AGGACTCCAAGGGGGCCAGCAAAGATTTACCTGGGC...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCCGTTCACCAAAGTaGTGCATTCCAGCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRARSPK*CIPASR
Trigger: CCTCGAGGCTGGAATGCAGCACTTTGGTGAACGGGC...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGTGTGGTGGTGCGTGTaGAGGTGCCGCTGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTVWWCV*RCRWPK
Trigger: CTTCGGCCAGCGGCACCTGCACACGCACCACCACAC...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAACAGAGGTGCTGGTGCTaGTACTATTGCTGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQQRCWC*YYCCLG
Trigger: ACCCAAACAGCAATAGTACCAGCACCAGCACCTCTG...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCCAGAGGTGCTGGTGCTaGTACTATTGCTGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAQRCWC*YYCCLG
Trigger: ACCCAAACAGCAATAGTACCAGCACCAGCACCTCTG...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAATGGCGGCAGAGGTGCTaGTGCTGGTACTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKWRQRC*CWYYCC
Trigger: ACAGCAATAGTACCAGCACCAGCACCTCTGCCGCCA...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CATGCAAGTACTGTATGTATGACTGATGCTGACTCATGGGTGAGGAGACAGCCAGCGCCTCGGCTGCTCTaGCTTTTACCTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HASTVCMTDADSWVRRQPAPRLL*LLPGFS
Trigger: GGAGAAGCCAGGTAAAAGCCAGAGCAGCCGAGGCGC...TGGCTGTCTCCTCACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAACGTGCTTGTCCTTCCTaGATTTCCCCGCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQRACPS*ISPHPY
Trigger: ATAAGGATGCGGGGAAATCCAGGAAGGACAAGCACG...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCTGGAAATCGGCGGTaGTGGCGCTGGCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRAGNRR*WRWHCK
Trigger: TTTACAGTGCCAGCGCCACCACCGCCGATTTCCAGC...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTCTCTCTGCCCCATTCTaGGTCAACACATGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSLSAPF*VNTCRG
Trigger: ACCTCTGCATGTGTTGACCCAGAATGGGGCAGAGAG...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAGCTGCTGCTGGTGATTaGAGAGAAGCTGCGATTTAC +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQAAAGD*REAAIY
Trigger: GTAAATCGCAGCTTCTCTCCAATCACCAGCAGCAGC...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp CTTTTCCACAGGAGCAGGAGACTTGCTGCGGTATTGGTTAGCATGCTGCTGGAGGACTTGCTGCGGTATTaGTTAGCATGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LFHRSRRLAAVLVSMLLEDLLRY*LACCWS
Trigger: GCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTC...CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGTGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR CCA 90 bp GGACGGGAGAAACAGCCCGGTATGCAGGATGGCTGGGGTCGTACATCTGTGGGTTGGTACGCAGGCTATTaGGTTATTTGCCATTCAAGA +
Preference number: 4 (lower is better)
Translates to: GREKQPGMQDGWGRTSVGWYAGY*VICHSR
Trigger: TCTTGAATGGCAAATAACCCAATAGCCTGCGTACCA...ACCCACAGATGTACGACCCCAGCCATCCTGCATACCGGGCTGTTTCTCCCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
3UTR CAA 72 bp CAGCAGAGGTCAAGCAGCAGGAGACTTGCTGCGGTATaGGTTAGCATGCTGCTGGAGCAAATCCAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: QQRSSSRRLAAV*VSMLLEQIQCF
Trigger: AAAGCACTGGATTTGCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTGCTTGACCTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505686.5
CDS-3UTR TCA 90 bp TGCAGGATGGCTGGGGTCGTACATCTGTGGGTAAGGATAAGCATGCAAGTACTGTCTTGCCAGTGCTGCTaGTCTCGGGAATCCCATACA +
Preference number: 4 (lower is better)
Translates to: CRMAGVVHLWVRISMQVLSCQCC*SRESHT
Trigger: TGTATGGGATTCCCGAGATCAGCAGCACTGGCAAGA...CAGTACTTGCATGCTTATCCTTACCCACAGATGTACGACCCCAGCCATCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGTTTCCCATGAGCCCTaGATCCGGGGCACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRVSHEP*IRGTFA
Trigger: AGCAAAAGTGCCCCGGATTCAGGGCTCATGGGAAAC...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGTCTCTTCTCTCCCTaGCATCTTCCCATAAACAGG +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRACLFSP*HLPINR
Trigger: CCTGTTTATGGGAAGATGTCAGGGAGAGAAGAGACA...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GGTAAGGATAAGCATGCAAGTACTGTATGTATGACTGATGCTGACTCATGGGTGTGGGCAGCCACCTGCTaGGAGGCAACAAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GKDKHASTVCMTDADSWVWAATC*EATRAA
Trigger: TGCTGCCCTTGTTGCCTCTCAGCAGGTGGCTGCCCA...CACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATGCTTATCCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTAAGCGCTTCCCCATGTaGTCCAGTCACATGACAATG +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSKRFPM*SSHMTM
Trigger: CATTGTCATGTGACTGGATCACATGGGGAAGCGCTT...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TGCAGGATGGCTGGGGTCGTACATCTGTGGGTAAGGATAAGCATGCAAGTACTGTGGTGCTGGTACTATTaGTGTTTGGGTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CRMAGVVHLWVRISMQVLWCWYY*CLGCRC
Trigger: GCAGCGGCAACCCAAACAGCAATAGTACCAGCACCA...CAGTACTTGCATGCTTATCCTTACCCACAGATGTACGACCCCAGCCATCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGGTGGCGGCAGAGGTaGTGGTGCTGGTACTATTGC +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVRWRQR*WCWYYC
Trigger: GCAATAGTACCAGCACCAGCACCTCTGCCGCCACCG...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCGGAGGGGCCCAGTCGTaGTTGGTGCAGTCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGAGGAQS*LVQSSR
Trigger: CCTACTGGACTGCACCAAGCACGACTGGGCCCCTCC...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTTGGAACCTGGGCCATTaGTCATCAGCTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSWNLGH*SSALSF
Trigger: GAAAGAGAGAGCTGATGAGCAATGGCCCAGGTTCCA...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTCGGTATTGGTTAGCATaGTGCTGGAGCAAATCCAGT +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPRYWLA*CWSKSS
Trigger: ACTGGATTTGCTCCAGCAGCATGCTAACCAATACCG...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATTGGTGCGTGTGCAGGTaGCGCTGGCCGAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYWCVCR*RWPKGE
Trigger: CTCCCCCTTCGGCCAGCGGCACCTGCACACGCACCA...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR GCA 90 bp CATTCCAGATGCAGATGCCTGGGCAGCCACCTGCTGAGAGGCAACAAGGGCAGCGAAATGACTGGTTTTTaGCTGCCATTAAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: HSRCRCLGSHLLRGNKGSEMTGF*LPLRHF
Trigger: GAAATGCCTTAATGGCAGGCAAAAACCAGTCATTTC...GCTGCCCTTGTTGCCTCTCAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCCATCCTTATCCCGCTTaGCGCCTCGGCTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGAHPYPA*RLGCSG
Trigger: GCCAGAGCAGCCGAGGCGCCAAGCGGGATAAGGATG...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAATTCTTGATTCGCCTGTaGCTCTCCTCCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKFLIRL*LSSSSS
Trigger: AGAGGAGGAGGAGGAGAGCCACAGGCGAATCAAGAA...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GTTCCCCGAGAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCGGAAATCGGCGGTGGTaGCGCTGGCACTGTAAACAG +
Preference number: 4 (lower is better)
Translates to: VPRESFQFTGVFRSSFFSGNRRW*RWHCKQ
Trigger: CTGTTTACAGTGCCAGCGCCACCACCGCCGATTTCC...GCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTCTCGGGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CATGCAAGTACTGTATGTATGACTGATGCTGACTCATGGGTGAGGAGACAGCCAGGAAATCGGCGGTGGTaGCGCTGGCACTGTAAACAG +
Preference number: 4 (lower is better)
Translates to: HASTVCMTDADSWVRRQPGNRRW*RWHCKQ
Trigger: CTGTTTACAGTGCCAGCGCCACCACCGCCGATTTCC...TGGCTGTCTCCTCACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGGGTCGTACATCTGTaGGTAAGGATAAGCATGCAA +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPGVVHL*VRISMQ
Trigger: TTGCATGCTTATCCTTACCCACAGATGTACGACCCC...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGACTTGCTGCGGTATTaGTTAGCATGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKDLLRY*LACCWS
Trigger: GCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTC...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCGTGTGCAGGTGCCGCTaGCCGAAGGGGGAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTVCRCR*PKGEWR
Trigger: TCGCCACTCCCCCTTCGGCCAGCGGCACCTGCACAC...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GTTCCCCGAGAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCCCGCTGCTCACACTTTaGCCCAGCGCTGAATTCATG +
Preference number: 4 (lower is better)
Translates to: VPRESFQFTGVFRSSFFSPLLTL*PSAEFM
Trigger: CATGAATTCAGCGCTGGGTCAAAGTGTGAGCAGCGG...GCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTCTCGGGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGCCATTCTGGTGGCCCTaGAGCAGGTCGTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARPFWWP*SRSCLS
Trigger: GGACAAGCACGACCTGCTTCAGGGCCACCAGAATGG...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp CATGCAAGTACTGTATGTATGACTGATGCTGACTCATGGGTGAGGAGACAGCCAGTTTCCCATGAGCCCTaGATCCGGGGCACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: HASTVCMTDADSWVRRQPVSHEP*IRGTFA
Trigger: AGCAAAAGTGCCCCGGATTCAGGGCTCATGGGAAAC...TGGCTGTCTCCTCACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCTTCGTCCGCTGGCATTaGGGCTGCCCCGCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTFVRWH*GCPASL
Trigger: AAGGGAGGCGGGGCAGCCTCAATGCCAGCGGACGAA...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTTGGGAGCGTTGTCTGTaGAAGTGTAAACCTTATCGG +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSWERCL*KCKPYR
Trigger: CCGATAAGGTTTACACTTTCACAGACAACGCTCCCA...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAATCACCGACTGGTGCTaGGGCTGTAAGGATGCAGAA +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRITDWC*GCKDAE
Trigger: TTCTGCATCCTTACAGCCTCAGCACCAGTCGGTGAT...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp CATTCCAGATGCAGATGCCTGGGCAGCCACCTGCTGAGAGGCAACAAGGGCAGCTCTATCAAGTTCTTCTaGCTTTTGCTGATCCAGATA +
Preference number: 4 (lower is better)
Translates to: HSRCRCLGSHLLRGNKGSSIKFF*LLLIQI
Trigger: TATCTGGATCAGCAAAAGTCAGAAGAACTTGATAGA...GCTGCCCTTGTTGCCTCTCAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTTGTCTCTTCTCTCCCTaGCATCTTCCCATAAACAGG +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSCLFSP*HLPINR
Trigger: CCTGTTTATGGGAAGATGTCAGGGAGAGAAGAGACA...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATTGGGCAGCCACCTGCTaGGAGGCAACAAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNWAATC*EATRAA
Trigger: TGCTGCCCTTGTTGCCTCTCAGCAGGTGGCTGCCCA...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGATTTCCCACAGGAGCCTaGCCCCGCGGTGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGFPTGA*PRGGGR
Trigger: TCTGCCGCCACCGCGGGGGCAGGCTCCTGTGGGAAA...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCGGGCCTGGCTGCCACTaGCATTCTGGTGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFGPGCH*HSGGPE
Trigger: TTCAGGGCCACCAGAATGGCAGTGGCAGCCAGGCCC...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000613878.4
CDS-3UTR GCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATCCAGCACCAGGGGATaGCGGTGCCTTCAACTGGTC +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGSSTRG*RCLQLV
Trigger: GACCAGTTGAAGGCACCGGCATCCCCTGGTGCTGGA...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGTCTCAGCAGCCAAACTaGCGTCTGCTGCCGAGCAAC +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVSQQPN*RLLPSN
Trigger: GTTGCTCGGCAGCAGACGGCAGTTTGGCTGCTGAGA...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp GTTAACGATACAGGAAGGCTGGGCACACCACTCTCTTTATTAGGAGTTTTCCTCATCCCTTTCCCTTTCTaGCTCCCGTTCCCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VNDTGRLGTPLSLLGVFLIPFPF*LPFPLS
Trigger: GCTGAGCGGGAACGGGAGGCAGAAAGGGAAAGGGAT...GAGGAAAACTCCTAATAAAGAGAGTGGTGTGCCCAGCCTTCCTGTATCGTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR GCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACGTGTGGTGGTGCGTGTaGAGGTGCCGCTGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNVWWCV*RCRWPK
Trigger: CTTCGGCCAGCGGCACCTGCACACGCACCACCACAC...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GTTCCCCGAGAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCTGGCGGCAGAGGTGCTaGTGCTGGTACTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: VPRESFQFTGVFRSSFFSWRQRC*CWYYCC
Trigger: ACAGCAATAGTACCAGCACCAGCACCTCTGCCGCCA...GCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTCTCGGGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACGCGCCTCGGCTGCTCTaGCTTTTACCTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHAPRLL*LLPGFS
Trigger: GGAGAAGCCAGGTAAAAGCCAGAGCAGCCGAGGCGC...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCCAGTGCCCCCGCAGTaGAAGGGGCTCGCGCCACCT +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFPVPPQ*KGLAPP
Trigger: AGGTGGCGCGAGCCCCTTCCACTGCGGGGGCACTGG...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACCGGCGGTGGTGGCGCTaGCACTGTAAACAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNRRWWR*HCKQGV
Trigger: GACCCCCTGTTTACAGTGCCAGCGCCACCACCGCCG...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCGGCGGTGGTGGCGCTaGCACTGTAAACAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTRRWWR*HCKQGV
Trigger: GACCCCCTGTTTACAGTGCCAGCGCCACCACCGCCG...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAACAGGTCCAGCTCCATTaGAGGCTTGTTTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQQVQLH*RLVFPF
Trigger: AAAAGGAAAAACAAGCCTCCAATGGAGCTGGACCTG...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATTCGAGGCGCTCCCTATaGAAGGGCTGGGAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHSRRSL*KGWERC
Trigger: ACAACGCTCCCAGCCCTTCCATAGGGAGCGCCTCGA...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTATCTGATGGGGAACTaGCCTTTGATCTCATACCCT +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAYLMGN*PLISYP
Trigger: AGGGTATGAGATCAAAGGCCAGTTCCCCATCAGATA...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTGGGGTCGTACATCTGTaGGTAAGGATAAGCATGCAA +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSGVVHL*VRISMQ
Trigger: TTGCATGCTTATCCTTACCCACAGATGTACGACCCC...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTAGCATGCTGCTaGAGCAAATCCAGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAWLACC*SKSSAL
Trigger: TAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCA...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGGAGTGGTTTGCGACGTaGCAGCAGACCCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVEWFAT*QQTLCV
Trigger: CACACACAGGGTCTGCTGCCACGTCGCAAACCACTC...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GCTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGTATTGACTTTCCTTGAATCTGGGTCCTaGGAGGGGCCCAGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: ALDSVVVFVLTLGLVLTFLESGS*EGPSRA
Trigger: AGCACGACTGGGCCCCTCCCAGGACCCAGATTCAAG...GAAAGTCAATACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTCTTGAATCTGGGTCCTaGGAGGGGCCCAGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTLESGS*EGPSRA
Trigger: AGCACGACTGGGCCCCTCCCAGGACCCAGATTCAAG...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
3UTR CAA 72 bp AGCCTTTTCCACAGGAGCAGGAGACTTGCTGCGGTATaGGTTAGCATGCTGCTGGAGCAAATCCAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SLFHRSRRLAAV*VSMLLEQIQCF
Trigger: AAAGCACTGGATTTGCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGTGGAAAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR TCA 90 bp CATGCAAGTACTGTATGTATGACTGATGCTGACTCATGGGTGAGGAGACAGCCAACTTTGACCCAGCGCTaGATTCATGCCAGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: HASTVCMTDADSWVRRQPTLTQR*IHASCL
Trigger: GAGGCAACTGGCATGAATTCAGCGCTGGGTCAAAGT...TGGCTGTCTCCTCACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCAGGTCACTTGTCGGTaGCTCACAAAACCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVQVTCR*LTKPGR
Trigger: CCTCCCAGGTTTTGTGAGTCACCGACAAGTGACCTG...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGTGATCCAGTCACATaGCAATGTACATGTCCAATC +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRACDPVT*QCTCPI
Trigger: GATTGGACATGTACATTGTCATGTGACTGGATCACA...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTATTGCTGTTTGGGTTaGCGCTGCCGCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARYCCLG*RCRRCS
Trigger: TGAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATA...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATTATTGCTGTTTGGGTTaGCGCTGCCGCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHYCCLG*RCRRCS
Trigger: TGAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATA...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCGCTTGGCGCCTCGGCTaGTCTGGCTTTTACCTGGCT +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSAWRLG*SGFYLA
Trigger: AGCCAGGTAAAAGCCAGAGCAGCCGAGGCGCCAAGC...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GCTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGTATTGACTTTCTTTGCTAACTTCCCCTaGAGCGGCGACGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: ALDSVVVFVLTLGLVLTFFANFP*SGDAAT
Trigger: AGTGGCAGCGTCGCCGCTGCAGGGGAAGTTAGCAAA...GAAAGTCAATACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACTTTGCTAACTTCCCCTaGAGCGGCGACGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHFANFP*SGDAAT
Trigger: AGTGGCAGCGTCGCCGCTGCAGGGGAAGTTAGCAAA...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGACCCAGTCGTGCTTGGTaGAGTCCAGTAGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGPSRAW*SPVGFP
Trigger: TGGGAACCCTACTGGACTGCACCAAGCACGACTGGG...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTCCCAGTCGTGCTTGGTaGAGTCCAGTAGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTPSRAW*SPVGFP
Trigger: TGGGAACCCTACTGGACTGCACCAAGCACGACTGGG...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACCCCAGTCGTGCTTGGTaGAGTCCAGTAGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHPSRAW*SPVGFP
Trigger: TGGGAACCCTACTGGACTGCACCAAGCACGACTGGG...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTCTCACTGCATTCAAGTaGCACATTACTCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPLTAFK*HITQSF
Trigger: GAAGGATTGAGTAATGTGGCACTTGAATGCAGTGAG...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTCTCAGCAGCCAAACTaGCGTCTGCTGCCGAGCAAC +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARSQQPN*RLLPSN
Trigger: GTTGCTCGGCAGCAGACGGCAGTTTGGCTGCTGAGA...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGCGTTCACCAAAGTGCTaGATTCCAGCCTCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARRSPKC*IPASRR
Trigger: GCGCCTCGAGGCTGGAATGCAGCACTTTGGTGAACG...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATCGTTCACCAAAGTGCTaGATTCCAGCCTCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHRSPKC*IPASRR
Trigger: GCGCCTCGAGGCTGGAATGCAGCACTTTGGTGAACG...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGGTGCCATTGGTGCCTaGCCGTTCACCAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTGAIGA*PFTKVL
Trigger: CAGCACTTTGGTGAACGGGCAGGCACCAATGGCACC...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTTTGATCTTCATTCCCTaGGTGCTCCCACTATTTCCA +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSLIFIP*VLPLFP
Trigger: TGGAAATAGTGGGAGCACGCAGGGAATGAAGATCAA...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGAGAAACAGCCCGGTATaGAGGATGGCTGGGGTCGTA +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVRNSPV*RMAGVV
Trigger: TACGACCCCAGCCATCCTGCATACCGGGCTGTTTCT...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACATCCCTTTCCCTTTCTaGCTCCCGTTCCCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHIPFPF*LPFPLS
Trigger: GCTGAGCGGGAACGGGAGGCAGAAAGGGAAAGGGAT...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTCATTCCAGATGCAGATaGCTGGGCAGCCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTHSRCR*LGSHLL
Trigger: CAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATG...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GCTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGTATTGACTTTCCATTCCAGATGCAGATaGCTGGGCAGCCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: ALDSVVVFVLTLGLVLTFHSRCR*LGSHLL
Trigger: CAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATG...GAAAGTCAATACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATTCTCCAGGGCGCCCTTaGACTTCCTGCCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNSPGRP*TSCLLP
Trigger: TGGCAAGAGGCAGGAAGTCCAAGGGCGCCCTGGAGA...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GTTCCCCGAGAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCTTCTTGATTCGCCTGTaGCTCTCCTCCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VPRESFQFTGVFRSSFFSFLIRL*LSSSSS
Trigger: AGAGGAGGAGGAGGAGAGCCACAGGCGAATCAAGAA...GCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTCTCGGGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCGGGCCCAGTCGTGCTTaGTGCAGTCCAGTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFGPSRA*CSPVGF
Trigger: GAACCCTACTGGACTGCACCAAGCACGACTGGGCCC...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATGGGCCCAGTCGTGCTTaGTGCAGTCCAGTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNGPSRA*CSPVGF
Trigger: GAACCCTACTGGACTGCACCAAGCACGACTGGGCCC...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGGTGACTCACAAAACCTaGGAGGGGCCCAGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARVTHKT*EGPSRA
Trigger: AGCACGACTGGGCCCCTCCCAGGTTTTGTGAGTCAC...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCTTTGCTGGCCCCCTTaGAGTCCTCTAGTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVLCWPP*SPLVSP
Trigger: TGGGGAAACTAGAGGACTCCAAGGGGGCCAGCAAAG...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGACAGGTAAATCTTTGCTaGCCCCCTTGGAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRQVNLC*PPWSPL
Trigger: TAGAGGACTCCAAGGGGGCCAGCAAAGATTTACCTG...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAATTTAAATCTCGAGGTTaGGTCTACACCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQFKSRG*VYTCLL
Trigger: AAGCAGACAGGTGTAGACCCAACCTCGAGATTTAAA...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGGGGTCGTACATCTGTaGGTAAGGATAAGCATGCAA +
Preference number: 4 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKGVVHL*VRISMQ
Trigger: TTGCATGCTTATCCTTACCCACAGATGTACGACCCC...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGGGTATGCAGGATGGCTaGGGTCGTACATCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVGMQDG*GRTSVG
Trigger: ACCCACAGATGTACGACCCCAGCCATCCTGCATACC...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GGTAAGGATAAGCATGCAAGTACTGTATGTATGACTGATGCTGACTCATGGGTGGCCCGGTATGCAGGATaGCTGGGGTCGTACATCTGT +
Preference number: 4 (lower is better)
Translates to: GKDKHASTVCMTDADSWVARYAG*LGSYIC
Trigger: ACAGATGTACGACCCCAGCCATCCTGCATACCGGGC...CACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATGCTTATCCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTTGGCCGAAGGGGGAGTaGCGATCCCTTTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTWPKGE*RSLSLS
Trigger: AGAAAGGGAAAGGGATCGCCACTCCCCCTTCGGCCA...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGAGAGTGGTTTGCGACGTaGCAGCAGACCCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGEWFAT*QQTLCV
Trigger: CACACACAGGGTCTGCTGCCACGTCGCAAACCACTC...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCGAGTGGTTTGCGACGTaGCAGCAGACCCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGAEWFAT*QQTLCV
Trigger: CACACACAGGGTCTGCTGCCACGTCGCAAACCACTC...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp AGCCTTGAAAAGGGTCATATTGACCCGGGATTAGCGGGTAACCCATGCCAACGTATTTCCTTTACTGAGTaGTTTGCGACGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLEKGHIDPGLAGNPCQRISFTE*FATWQQ
Trigger: CTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT...ACGTTGGCATGGGTTACCCGCTAATCCCGGGTCAATATGACCCTTTTCAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAACAACACAGTTTTTGTaGTACTGGCAACCCCATGCC +
Preference number: 4 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKTTQFL*YWQPHA
Trigger: GGCATGGGGTTGCCAGTACCACAAAAACTGTGTTGT...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGTCTTGCCAGTGCTGCTaGTCTCGGGAATCCCATACA +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVSCQCC*SRESHT
Trigger: TGTATGGGATTCCCGAGATCAGCAGCACTGGCAAGA...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACGTTTCCCATGAGCCCTaGATCCGGGGCACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHVSHEP*IRGTFA
Trigger: AGCAAAAGTGCCCCGGATTCAGGGCTCATGGGAAAC...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGCAGGTCACTTGTCGGTaGCTCACAAAACCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARQVTCR*LTKPGR
Trigger: CCTCCCAGGTTTTGTGAGTCACCGACAAGTGACCTG...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGTCTCTGGTTTCCCTTaGGGGGTAGTGGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTVSGFP*GVVGVL
Trigger: AAGCACTCCCACTACCCCTCAAGGGAAACCAGAGAC...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCGGGTCTAAGTGTGCATaGGCCTGGTGGTACCTCAGG +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFGSKCA*AWWYLR
Trigger: CCTGAGGTACCACCAGGCTCATGCACACTTAGACCC...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGACTCTTTGGTGTAGCCTaGACAACAGTTGTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRLFGVA*TTVVVR
Trigger: CCTCACAACAACTGTTGTTCAGGCTACACCAAAGAG...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCGCCATGCGGCTCTCCTaGGACTCCGACAGTCCATTT +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSAMRLS*DSDSPF
Trigger: AAATGGACTGTCGGAGTCTCAGGAGAGCCGCATGGC...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCGCCCTTGGACTTCCTaGCTCTTGCCAGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTRPWTS*LLPVLL
Trigger: CAGCAGCACTGGCAAGAGGCAGGAAGTCCAAGGGCG...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCCCAGCGCTGAATTCATaGCAGTTGCCTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFPALNS*QLPLQG
Trigger: GCCCTGGAGAGGCAACTGGCATGAATTCAGCGCTGG...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000613878.4
CDS-3UTR GCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATCCAGCGCTGAATTCATaGCAGTTGCCTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNPALNS*QLPLQG
Trigger: GCCCTGGAGAGGCAACTGGCATGAATTCAGCGCTGG...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACCGGTGGCGGCAGAGGTaGTGGTGCTGGTACTATTGC +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNRWRQR*WCWYYC
Trigger: GCAATAGTACCAGCACCAGCACCTCTGCCGCCACCG...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCTCGCGCCACCTCCATTaGTCTTGGCCCCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFSRHLH*SWPQSH
Trigger: ATGGCTTTGGGGCCAAGAGCAATGGAGGTGGCGCGA...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000613878.4
CDS-3UTR GCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATTCGCGCCACCTCCATTaGTCTTGGCCCCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNSRHLH*SWPQSH
Trigger: ATGGCTTTGGGGCCAAGAGCAATGGAGGTGGCGCGA...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGAGGAGGGGCCCAGTCGTaGTTGGTGCAGTCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGGGAQS*LVQSSR
Trigger: CCTACTGGACTGCACCAAGCACGACTGGGCCCCTCC...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATACCAGGGGATGCCGGTaGCTTCAACTGGTCATAAGC +
Preference number: 4 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHTRGCR*LQLVIS
Trigger: GCTTATGACCAGTTGAAGGCACCGGCATCCCCTGGT...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATGCCCGTTCACCAAAGTaGTGCATTCCAGCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNARSPK*CIPASR
Trigger: CCTCGAGGCTGGAATGCAGCACTTTGGTGAACGGGC...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp GCTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGTATTGACTTTCTTAGCGGGTAACCCATaGCAACGTGGGTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: ALDSVVVFVLTLGLVLTFLAGNP*QRGCGG
Trigger: ACCACCACACCCACGTTGGCATGGGTTACCCGCTAA...GAAAGTCAATACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR GCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATCATTCCAGATGCAGATaGCTGGGCAGCCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNHSRCR*LGSHLL
Trigger: CAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATG...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCTTGCTCTCCAGGAAACATTCCAGATaGAGATGCCTGGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ESFQFTGVFRSSFFSLLSRKHSR*RCLGSH
Trigger: GTGGCTGCCCAGGCATCTGCATCTGGAATGTTTCCT...GGAGAGCAAGCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACGGGGACAGGGAAGGATaGAGAGTAAGGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHGDREG*RVRWLM
Trigger: CATGAGCCACCTTACTCTCCATCCTTCCCTGTCCCC...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306315.9
CDS-3UTR CCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATGGCGGCAGAGGTGCTaGTGCTGGTACTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGWRQRC*CWYYCC
Trigger: ACAGCAATAGTACCAGCACCAGCACCTCTGCCGCCA...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTGGCGGCAGAGGTGCTaGTGCTGGTACTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARWRQRC*CWYYCC
Trigger: ACAGCAATAGTACCAGCACCAGCACCTCTGCCGCCA...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGCTGGAAATCGGCGGTaGTGGCGCTGGCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWAGNRR*WRWHCK
Trigger: TTTACAGTGCCAGCGCCACCACCGCCGATTTCCAGC...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCGCTGGAAATCGGCGGTaGTGGCGCTGGCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFAGNRR*WRWHCK
Trigger: TTTACAGTGCCAGCGCCACCACCGCCGATTTCCAGC...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACGGGCCCAAGACACTCTaGCTCTGTCACTACTCCAAC +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHGPKTL*LCHYSN
Trigger: GTTGGAGTAGTGACAGAGCCAGAGTGTCTTGGGCCC...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGGGGCCCAAGACACTCTaGCTCTGTCACTACTCCAAC +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARGPKTL*LCHYSN
Trigger: GTTGGAGTAGTGACAGAGCCAGAGTGTCTTGGGCCC...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACGGGCCCAGTCGTGCTTaGTGCAGTCCAGTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNGPSRA*CSPVGF
Trigger: GAACCCTACTGGACTGCACCAAGCACGACTGGGCCC...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAACGCAGCCGTCATGTTaGAGATTACTGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRTQPSC*RLLEGC
Trigger: ACAACCTTCCAGTAATCTCCAACATGACGGCTGCGT...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTCTCCTCTCCCAGTCTaGGCCATTTTCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARSPLPV*AIFCSA
Trigger: GGCAGAGCAGAAAATGGCCCAGACTGGGAGAGGAGA...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGGCCCTAGTTTAGAATaGTTTTTGTTAGGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKGPSLE*FLLGSG
Trigger: TCCGGAGCCTAACAAAAACCATTCTAAACTAGGGCC...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGGTATGCAGGATGGCTaGGGTCGTACATCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTGMQDG*GRTSVG
Trigger: ACCCACAGATGTACGACCCCAGCCATCCTGCATACC...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GCTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGTATTGACTTTCGGTATGCAGGATGGCTaGGGTCGTACATCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: ALDSVVVFVLTLGLVLTFGMQDG*GRTSVG
Trigger: ACCCACAGATGTACGACCCCAGCCATCCTGCATACC...GAAAGTCAATACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCGCCCGGTATGCAGGATaGCTGGGGTCGTACATCTGT +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFARYAG*LGSYIC
Trigger: ACAGATGTACGACCCCAGCCATCCTGCATACCGGGC...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAAGGATAATGAAATCCTaGAGAGAGATATGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKRIMKS*REICPR
Trigger: CCTGGGGCATATCTCTCTCCAGGATTTCATTATCCT...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCTTGCTCTCCGACTTGCTGCGGTATTaGTTAGCATGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ESFQFTGVFRSSFFSLLSDLLRY*LACCWS
Trigger: GCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTC...GGAGAGCAAGCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGTGGCCGAAGGGGGAGTaGCGATCCCTTTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWWPKGE*RSLSLS
Trigger: AGAAAGGGAAAGGGATCGCCACTCCCCCTTCGGCCA...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCTGGCCGAAGGGGGAGTaGCGATCCCTTTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFWPKGE*RSLSLS
Trigger: AGAAAGGGAAAGGGATCGCCACTCCCCCTTCGGCCA...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCATGCCAACGTGGGTGTaGTGGTGCGTGTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTMPTWV*WCVCRC
Trigger: GCACCTGCACACGCACCACCACACCCACGTTGGCAT...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR TCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGCCGCTGCTCACACTTTaGCCCAGCGCTGAATTCATG +
Preference number: 4 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWPLLTL*PSAEFM
Trigger: CATGAATTCAGCGCTGGGTCAAAGTGTGAGCAGCGG...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCGTAGAATCTGAGGCGTaGGACTGCTGGAAATCGGCG +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSVESEA*DCWKSA
Trigger: CGCCGATTTCCAGCAGTCTCACGCCTCAGATTCTAC...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGTAGAATCTGAGGCGTaGGACTGCTGGAAATCGGCG +
Preference number: 4 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWVESEA*DCWKSA
Trigger: CGCCGATTTCCAGCAGTCTCACGCCTCAGATTCTAC...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GTTCCCCGAGAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCCAACTTCACATGTATTaGCACCCACAGAACGAGTCC +
Preference number: 4 (lower is better)
Translates to: VPRESFQFTGVFRSSFFSQLHMY*HPQNES
Trigger: GGACTCGTTCTGTGGGTGTCAATACATGTGAAGTTG...GCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTCTCGGGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGCTTGTCTTTGCAGCTaGACTCTCTGCCCCATTCTG +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTACLCS*TLCPIL
Trigger: CAGAATGGGGCAGAGAGTTCAGCTGCAAAGACAAGC...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCTGGGGAACTGGCCTTTaGTCTCATACCCTCCGACCT +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFWGTGL*SHTLRP
Trigger: AGGTCGGAGGGTATGAGATCAAAGGCCAGTTCCCCA...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACATCACCGACTGGTGCTaGGGCTGTAAGGATGCAGAA +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHITDWC*GCKDAE
Trigger: TTCTGCATCCTTACAGCCTCAGCACCAGTCGGTGAT...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGCAGGATGTCTTTGTGTaGTCACCGACTGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARQDVFV*SPTGAE
Trigger: CTCAGCACCAGTCGGTGATCACACAAAGACATCCTG...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGACTTGCTCTCCTCCATTaGTTGAGAATCAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRLALLH*LRIRML
Trigger: AAGCATCCTGATTCTCAATCAATGGAGGAGAGCAAG...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GTTCCCCGAGAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCTGTCTCTTCTCTCCCTaGCATCTTCCCATAAACAGG +
Preference number: 4 (lower is better)
Translates to: VPRESFQFTGVFRSSFFSCLFSP*HLPINR
Trigger: CCTGTTTATGGGAAGATGTCAGGGAGAGAAGAGACA...GCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTCTCGGGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCTTGCTCTCCAAGCGCTTCCCCATGTaGTCCAGTCACATGACAATG +
Preference number: 4 (lower is better)
Translates to: ESFQFTGVFRSSFFSLLSKRFPM*SSHMTM
Trigger: CATTGTCATGTGACTGGATCACATGGGGAAGCGCTT...GGAGAGCAAGCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCATGATGCCATGTTCTTaGATCTGGGTCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGAMMPCS*IWVLGG
Trigger: CCCTCCCAGGACCCAGATTCAAGAACATGGCATCAT...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATGGTGCTGGTACTATTaGTGTTTGGGTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGWCWYY*CLGCRC
Trigger: GCAGCGGCAACCCAAACAGCAATAGTACCAGCACCA...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GCTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGTATTGACTTTCCTGGCTTCTCCTCTTTaGTTTTCCCACAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ALDSVVVFVLTLGLVLTFLASPL*FSHRSL
Trigger: CAGGCTCCTGTGGGAAAAGCAAAGAGGAGAAGCCAG...GAAAGTCAATACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTCTGGCTTCTCCTCTTTaGTTTTCCCACAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTLASPL*FSHRSL
Trigger: CAGGCTCCTGTGGGAAAAGCAAAGAGGAGAAGCCAG...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATTTCTGGGTCAACACATaGAGAGGTGCCATTGGTGCC +
Preference number: 4 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHFWVNT*RGAIGA
Trigger: GGCACCAATGGCACCTCTGCATGTGTTGACCCAGAA...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATCTGAATAGGCCGGGCTaGTTGTCTTTGCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHLNRPG*LSLQLN
Trigger: GTTCAGCTGCAAAGACAAGCAGCCCGGCCTATTCAG...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCTCATACCCTCCGACCTaGTGTCAGAACCACCATCGT +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGASYPPT*CQNHHR
Trigger: ACGATGGTGGTTCTGACAGCAGGTCGGAGGGTATGA...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTCATATAGAGCCCATATaGATACTGGCCATAATAAAG +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPHIEPI*ILAIIK
Trigger: CTTTATTATGGCCAGTATGCATATGGGCTCTATATG...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGAGAAACAGCCCGGTATaGAGGATGGCTGGGGTCGTA +
Preference number: 4 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWRNSPV*RMAGVV
Trigger: TACGACCCCAGCCATCCTGCATACCGGGCTGTTTCT...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGATATTGGTTAGCATGCTaGTGGAGCAAATCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRYWLAC*WSKSSA
Trigger: AGCACTGGATTTGCTCCAGCAGCATGCTAACCAATA...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATTTAGCGGGTAACCCATaGCAACGTGGGTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNLAGNP*QRGCGG
Trigger: ACCACCACACCCACGTTGGCATGGGTTACCCGCTAA...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCAGGAAACATTCCAGATaGAGATGCCTGGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGARKHSR*RCLGSH
Trigger: GTGGCTGCCCAGGCATCTGCATCTGGAATGTTTCCT...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTAGGAAACATTCCAGATaGAGATGCCTGGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTRKHSR*RCLGSH
Trigger: GTGGCTGCCCAGGCATCTGCATCTGGAATGTTTCCT...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp AGCCTTGAAAAGGGTCATATTGACCCGGGATTAGCGGGTAACCCATGCCAACGTGTACTGGCAACCCCATaGCTTCCAAAAGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: SLEKGHIDPGLAGNPCQRVLATP*LPKVLF
Trigger: AAAAAGTACTTTTGGAAGGCATGGGGTTGCCAGTAC...ACGTTGGCATGGGTTACCCGCTAATCCCGGGTCAATATGACCCTTTTCAAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR CCA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTAGTATCAACTGTATTTaGATCCACACCTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: CDVAADPVCASLVTDTKSSINCI*IHTFSC
Trigger: GCAGGAAAAGGTGTGGATCCAAATACAGTTGATACT...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCATCCTTATCCCGCTTaGCGCCTCGGCTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFHPYPA*RLGCSG
Trigger: GCCAGAGCAGCCGAGGCGCCAAGCGGGATAAGGATG...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTCACCTCCATTGCTCTTaGCCCCAAAGCCATAGAGGT +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTHLHCS*PQSHRG
Trigger: ACCTCTATGGCTTTGGGGCCAAGAGCAATGGAGGTG...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GGTAAGGATAAGCATGCAAGTACTGTATGTATGACTGATGCTGACTCATGGGTGCACCTCCATTGCTCTTaGCCCCAAAGCCATAGAGGT +
Preference number: 4 (lower is better)
Translates to: GKDKHASTVCMTDADSWVHLHCS*PQSHRG
Trigger: ACCTCTATGGCTTTGGGGCCAAGAGCAATGGAGGTG...CACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATGCTTATCCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATTTCTTGATTCGCCTGTaGCTCTCCTCCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHFLIRL*LSSSSS
Trigger: AGAGGAGGAGGAGGAGAGCCACAGGCGAATCAAGAA...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGAGGGCCCAGTCGTGCTTaGTGCAGTCCAGTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGGPSRA*CSPVGF
Trigger: GAACCCTACTGGACTGCACCAAGCACGACTGGGCCC...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCGTGACTCACAAAACCTaGGAGGGGCCCAGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTVTHKT*EGPSRA
Trigger: AGCACGACTGGGCCCCTCCCAGGTTTTGTGAGTCAC...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGATCGAGGCGCTCCCTATaGAAGGGCTGGGAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGSRRSL*KGWERC
Trigger: ACAACGCTCCCAGCCCTTCCATAGGGAGCGCCTCGA...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTAAGGATGCAGAATTGTaGTCCACTTTCTTAGAATCT +
Preference number: 4 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPKDAEL*STFLES
Trigger: AGATTCTAAGAAAGTGGACCACAATTCTGCATCCTT...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATAGGCAGGGCTGGTaGCCATCAGAGACTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGYRQGW*PSETSG
Trigger: ACCAGAAGTCTCTGATGGCCACCAGCCCTGCCTATA...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGAGTCTATAGGCAGGGCTaGTGGCCATCAGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGVYRQG*WPSETS
Trigger: AGAAGTCTCTGATGGCCACCAGCCCTGCCTATAGAC...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAACTGTGTGTGCGAGCCTaGTTACTGATACAAAAAGTA +
Preference number: 4 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKLCVRA*LLIQKV
Trigger: TACTTTTTGTATCAGTAACCAGGCTCGCACACACAG...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTTTCTGAGGGGCTTATaGGAAATATGTGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAFLRGL*EICEGY
Trigger: ATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TGCAGGATGGCTGGGGTCGTACATCTGTGGGTAAGGATAAGCATGCAAGTACTGAGGAACATTTTACACTaGTGCGTCTTTAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: CRMAGVVHLWVRISMQVLRNILH*CVFNRS
Trigger: GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCT...CAGTACTTGCATGCTTATCCTTACCCACAGATGTACGACCCCAGCCATCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp AGCCTTGAAAAGGGTCATATTGACCCGGGATTAGCGGGTAACCCATGCCAACGTACTTTTCTTTGGAGATaGGGGGACATTCGTTTATCT +
Preference number: 4 (lower is better)
Translates to: SLEKGHIDPGLAGNPCQRTFLWR*GDIRLS
Trigger: AGATAAACGAATGTCCCCTCATCTCCAAAGAAAAGT...ACGTTGGCATGGGTTACCCGCTAATCCCGGGTCAATATGACCCTTTTCAAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR TCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCACTTTGACCCAGCGCTaGATTCATGCCAGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFTLTQR*IHASCL
Trigger: GAGGCAACTGGCATGAATTCAGCGCTGGGTCAAAGT...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000613878.4
CDS-3UTR TCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCACTTTGACCCAGCGCTaGATTCATGCCAGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSTLTQR*IHASCL
Trigger: GAGGCAACTGGCATGAATTCAGCGCTGGGTCAAAGT...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GTTAACGATACAGGAAGGCTGGGCACACCACTCTCTTTATTAGGAGTTTTCCTCCAGTTTTCAGTTTCTTaGTTCGCCTGTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VNDTGRLGTPLSLLGVFLQFSVS*FACGSP
Trigger: AGGAGAGCCACAGGCGAATCAAGAAACTGAAAACTG...GAGGAAAACTCCTAATAAAGAGAGTGGTGTGCCCAGCCTTCCTGTATCGTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCGTAGAATCTGAGGCGTaGGACTGCTGGAAATCGGCG +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTVESEA*DCWKSA
Trigger: CGCCGATTTCCAGCAGTCTCACGCCTCAGATTCTAC...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCAACTTCACATGTATTaGCACCCACAGAACGAGTCC +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVQLHMY*HPQNES
Trigger: GGACTCGTTCTGTGGGTGTCAATACATGTGAAGTTG...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACGTCTCTGGTTTCCCTTaGGGGGTAGTGGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNVSGFP*GVVGVL
Trigger: AAGCACTCCCACTACCCCTCAAGGGAAACCAGAGAC...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGTGGGAGCGTTGTCTGTaGAAGTGTAAACCTTATCGG +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVWERCL*KCKPYR
Trigger: CCGATAAGGTTTACACTTTCACAGACAACGCTCCCA...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCAGCATCAGATATGTCTaGATAGGCCGGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGASIRYV*IGRAAC
Trigger: ACAAGCAGCCCGGCCTATTCAGACATATCTGATGCT...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACTGGGGAACTGGCCTTTaGTCTCATACCCTCCGACCT +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNWGTGL*SHTLRP
Trigger: AGGTCGGAGGGTATGAGATCAAAGGCCAGTTCCCCA...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCCCTCAGACTCCTTCTTaGTCTTCATTCCCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFPQTPS*SSFPAC
Trigger: GCACGCAGGGAATGAAGATCAAGAAGGAGTCTGAGG...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACAGTAGAGGGAGCTTTTaGGATTGTGGCCGATGGCAT +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHSRGSF*DCGRWH
Trigger: ATGCCATCGGCCACAATCTCAAAAGCTCCCTCTACT...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGCTGGCTTCTCCTCTTTaGTTTTCCCACAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWLASPL*FSHRSL
Trigger: CAGGCTCCTGTGGGAAAAGCAAAGAGGAGAAGCCAG...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGACCCAGTCGTGCTTGGTaGAGTCCAGTAGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGPSRAW*SPVGFP
Trigger: TGGGAACCCTACTGGACTGCACCAAGCACGACTGGG...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCTTCTGGGTCAACACATaGAGAGGTGCCATTGGTGCC +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFFWVNT*RGAIGA
Trigger: GGCACCAATGGCACCTCTGCATGTGTTGACCCAGAA...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCTGAATAGGCCGGGCTaGTTGTCTTTGCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSLNRPG*LSLQLN
Trigger: GTTCAGCTGCAAAGACAAGCAGCCCGGCCTATTCAG...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACTTAGCGGGTAACCCATaGCAACGTGGGTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNLAGNP*QRGCGG
Trigger: ACCACCACACCCACGTTGGCATGGGTTACCCGCTAA...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCCAGAGGTGCTGGTGCTaGTACTATTGCTGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGAQRCWC*YYCCLG
Trigger: ACCCAAACAGCAATAGTACCAGCACCAGCACCTCTG...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGAGGAAATCGGCGGTGGTaGCGCTGGCACTGTAAACAG +
Preference number: 4 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGGNRRW*RWHCKQ
Trigger: CTGTTTACAGTGCCAGCGCCACCACCGCCGATTTCC...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GTTCCCCGAGAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCCCGGTGCTGCAATATTaGATGAAGATGGGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: VPRESFQFTGVFRSSFFSPVLQY*MKMGKS
Trigger: ACTTTTCCCCATCTTCATCCAATATTGCAGCACCGG...GCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTCTCGGGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATCTCAGCAGCACAATTTaGGGGTGTCCTTCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYLSSTI*GCPSSA
Trigger: AGCGGACGAAGGACACCCCCAAATTGTGCTGCTGAG...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACCTTGGCATCCATTTTTaGGCTTCCCGTCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHLGIHF*ASRLFP
Trigger: GGGAAAGAGACGGGAAGCCCAAAAATGGATGCCAAG...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAGGGTGCATGTAACTTaGAGAATAATAAGGATCATA +
Preference number: 4 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQRVHVT*RIIRII
Trigger: TATGATCCTTATTATTCTCCAAGTTACATGCACCCT...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCGTCTATAGGCAGGGCTaGTGGCCATCAGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSVYRQG*WPSETS
Trigger: AGAAGTCTCTGATGGCCACCAGCCCTGCCTATAGAC...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATACTGATGCTGACTCATaGGTGAGGAGACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNTDADS*VRRQPL
Trigger: GAGTGGCTGTCTCCTCACCCATGAGTCAGCATCAGT...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATGGTATGCAGGATGGCTaGGGTCGTACATCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYGMQDG*GRTSVG
Trigger: ACCCACAGATGTACGACCCCAGCCATCCTGCATACC...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGACTGTGTGTGCGAGCCTaGTTACTGATACAAAAAGTA +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRLCVRA*LLIQKV
Trigger: TACTTTTTGTATCAGTAACCAGGCTCGCACACACAG...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCCAGTTTTCAGTTTCTTaGTTCGCCTGTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGAQFSVS*FACGSP
Trigger: AGGAGAGCCACAGGCGAATCAAGAAACTGAAAACTG...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTGGGTCTAAGTGTGCATaGGCCTGGTGGTACCTCAGG +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFGSKCA*AWWYLR
Trigger: CCTGAGGTACCACCAGGCTCATGCACACTTAGACCC...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAGCATCAGATATGTCTaGATAGGCCGGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFSIRYV*IGRAAC
Trigger: ACAAGCAGCCCGGCCTATTCAGACATATCTGATGCT...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACCTGGCCATAATAAAGTaGCTGAGCCAGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNLAIIK*LSQGRM
Trigger: CATCCTGCCCTGGCTCAGTCACTTTATTATGGCCAG...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGTCTTCTGACTTTTGCTaGTCCAGATATTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVSSDFC*SRYLGW
Trigger: CCAGCCCAAATATCTGGATCAGCAAAAGTCAGAAGA...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGCGCTTCCCCATGTaGTCCAGTCACATGACAATG +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFKRFPM*SSHMTM
Trigger: CATTGTCATGTGACTGGATCACATGGGGAAGCGCTT...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCTCCTCTTCTTTTTCCTaGCCCACGAATGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFSSSFS*PTNVSR
Trigger: CCTGGACACATTCGTGGGGCAGGAAAAAGAAGAGGA...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306315.9
CDS-3UTR GCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCTGGTGCTGGTACTATTaGTGTTTGGGTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTWCWYY*CLGCRC
Trigger: GCAGCGGCAACCCAAACAGCAATAGTACCAGCACCA...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGGCTTCTCCTCTTTaGTTTTCCCACAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTLASPL*FSHRSL
Trigger: CAGGCTCCTGTGGGAAAAGCAAAGAGGAGAAGCCAG...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCTGCTTCTGGAATTTGTaGGGACACGCTTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSCFWNL*GHAFQA
Trigger: AGCCTGGAAAGCGTGTCCGCACAAATTCCAGAAGCA...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACCTCCGACAGTCCATTTaGCAGCCCTTCATTCTTGTT +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHLRQSI*QPFILV
Trigger: AACAAGAATGAAGGGCTGGCAAATGGACTGTCGGAG...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGACTCCGACAGTCCATTTaGCAGCCCTTCATTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGLRQSI*QPFILV
Trigger: AACAAGAATGAAGGGCTGGCAAATGGACTGTCGGAG...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGTTGATCTTCATTCCCTaGGTGCTCCCACTATTTCCA +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVLIFIP*VLPLFP
Trigger: TGGAAATAGTGGGAGCACGCAGGGAATGAAGATCAA...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATGGGTCTACACCTGTCTaGTTCATAGAGTCCATGACA +
Preference number: 4 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHGSTPV*FIESMT
Trigger: TGTCATGGACTCTATGAAGCAGACAGGTGTAGACCC...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGGGTCTACACCTGTCTaGTTCATAGAGTCCATGACA +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTGSTPV*FIESMT
Trigger: TGTCATGGACTCTATGAAGCAGACAGGTGTAGACCC...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATCCTGGAGAGAGATATaGCCCAGGATAACTGTGCAT +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGSWREI*PRITVH
Trigger: ATGCACAGTTATCCTGGGGCATATCTCTCTCCAGGA...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTTCCTGGAGAGAGATATaGCCCAGGATAACTGTGCAT +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTSWREI*PRITVH
Trigger: ATGCACAGTTATCCTGGGGCATATCTCTCTCCAGGA...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGCGGTATTGGTTAGCATaGTGCTGGAGCAAATCCAGT +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARRYWLA*CWSKSS
Trigger: ACTGGATTTGCTCCAGCAGCATGCTAACCAATACCG...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GCTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGTATTGACTTTCCGGTATTGGTTAGCATaGTGCTGGAGCAAATCCAGT +
Preference number: 4 (lower is better)
Translates to: ALDSVVVFVLTLGLVLTFRYWLA*CWSKSS
Trigger: ACTGGATTTGCTCCAGCAGCATGCTAACCAATACCG...GAAAGTCAATACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGATTCGTTTATCTCCGCTaGGCTTTCTCTCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRFVYLR*AFSQRK
Trigger: TTTTCTTTGAGAGAAAGCCCAGCGGAGATAAACGAA...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000613878.4
CDS-3UTR CCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTGGAAATCGGCGGTGGTaGCGCTGGCACTGTAAACAG +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFGNRRW*RWHCKQ
Trigger: CTGTTTACAGTGCCAGCGCCACCACCGCCGATTTCC...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGTATTGTCCTCAGAGCTaGAGTTCAGGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWYCPQS*SSGPAP
Trigger: TGGAGCTGGACCTGAACTCCAGCTCTGAGGACAATA...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGAACCAATAATGGAACCTaGGCCATTGCTCATCAGCTC +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGTNNGT*AIAHQL
Trigger: GAGCTGATGAGCAATGGCCCAGGTTCCATTATTGGT...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCCTTGGCATCCATTTTTaGGCTTCCCGTCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFLGIHF*ASRLFP
Trigger: GGGAAAGAGACGGGAAGCCCAAAAATGGATGCCAAG...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTCTAGTTTCCCCAGCTTaGCATCCATTTTTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTLVSPA*HPFLGF
Trigger: GAAGCCCAAAAATGGATGCCAAGCTGGGGAAACTAG...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGACTTTGCTGGCCCCCTTaGAGTCCTCTAGTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGLCWPP*SPLVSP
Trigger: TGGGGAAACTAGAGGACTCCAAGGGGGCCAGCAAAG...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGATCTCCTCTCCCAGTCTaGGCCATTTTCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGSPLPV*AIFCSA
Trigger: GGCAGAGCAGAAAATGGCCCAGACTGGGAGAGGAGA...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATACTGATGCTGACTCATaGGTGAGGAGACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYTDADS*VRRQPL
Trigger: GAGTGGCTGTCTCCTCACCCATGAGTCAGCATCAGT...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCTTGCTCTCCTGGTTAGCATGCTGCTaGAGCAAATCCAGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: ESFQFTGVFRSSFFSLLSWLACC*SKSSAL
Trigger: TAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCA...GGAGAGCAAGCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATGACTTGCTGCGGTATTaGTTAGCATGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYDLLRY*LACCWS
Trigger: GCTCCAGCAGCATGCTAACCAATACCGCAGCAAGTC...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGAATTTCCTTTACTGAGTaGTTTGCGACGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGISFTE*FATWQQ
Trigger: CTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGACAGTTTTTGTGGTACTaGCAACCCCATGCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGQFLWY*QPHAFQ
Trigger: TTGGAAGGCATGGGGTTGCCAGTACCACAAAAACTG...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GTTAACGATACAGGAAGGCTGGGCACACCACTCTCTTTATTAGGAGTTTTCCTCAATCACAGATGTCTCTaGTACGCAGGCTATTGGGTT +
Preference number: 4 (lower is better)
Translates to: VNDTGRLGTPLSLLGVFLNHRCL*YAGYWV
Trigger: AACCCAATAGCCTGCGTACCAGAGACATCTGTGATT...GAGGAAAACTCCTAATAAAGAGAGTGGTGTGCCCAGCCTTCCTGTATCGTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR TCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCCAGTTTTCAGTTTCTTaGTTCGCCTGTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFQFSVS*FACGSP
Trigger: AGGAGAGCCACAGGCGAATCAAGAAACTGAAAACTG...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000613878.4
CDS-3UTR TCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATATTGTGGGCTTTGGTTaGATGGGTTTTAACGGAGGA +
Preference number: 4 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHIVGFG*MGFNGG
Trigger: TCCTCCGTTAAAACCCATTCAACCAAAGCCCACAAT...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACATTGTGGGCTTTGGTTaGATGGGTTTTAACGGAGGA +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHIVGFG*MGFNGG
Trigger: TCCTCCGTTAAAACCCATTCAACCAAAGCCCACAAT...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTTATCGGCCTCAGCTTTaGTACTGGCCATGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFYRPQL*YWPCGS
Trigger: AGAGCCGCATGGCCAGTATCAAAGCTGAGGCCGATA...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCAGTAGAGGGAGCTTTTaGGATTGTGGCCGATGGCAT +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTSRGSF*DCGRWH
Trigger: ATGCCATCGGCCACAATCTCAAAAGCTCCCTCTACT...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCTCTTCTGACTTTTGCTaGTCCAGATATTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGASSDFC*SRYLGW
Trigger: CCAGCCCAAATATCTGGATCAGCAAAAGTCAGAAGA...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATTCTTCTGACTTTTGCTaGTCCAGATATTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHSSDFC*SRYLGW
Trigger: CCAGCCCAAATATCTGGATCAGCAAAAGTCAGAAGA...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GCTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGTATTGACTTTCTCTTCTGACTTTTGCTaGTCCAGATATTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALDSVVVFVLTLGLVLTFSSDFC*SRYLGW
Trigger: CCAGCCCAAATATCTGGATCAGCAAAAGTCAGAAGA...GAAAGTCAATACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTCAAGTACTGTATGTATaGCTGATGCTGACTCATGGG +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTQVLYV*LMLTHG
Trigger: CCCATGAGTCAGCATCAGTCATACATACAGTACTTG...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATCAAGTACTGTATGTATaGCTGATGCTGACTCATGGG +
Preference number: 4 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHQVLYV*LMLTHG
Trigger: CCCATGAGTCAGCATCAGTCATACATACAGTACTTG...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATTGTCTCTTCTCTCCCTaGCATCTTCCCATAAACAGG +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNCLFSP*HLPINR
Trigger: CCTGTTTATGGGAAGATGTCAGGGAGAGAAGAGACA...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCTTGCTCTCCTGTGATCCAGTCACATaGCAATGTACATGTCCAATC +
Preference number: 4 (lower is better)
Translates to: ESFQFTGVFRSSFFSLLSCDPVT*QCTCPI
Trigger: GATTGGACATGTACATTGTCATGTGACTGGATCACA...GGAGAGCAAGCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCTCAGGCCGTTAATGTaGTTGTACTTTTTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVLRPLM*LYFLLQ
Trigger: CTGCAACAAAAAGTACAAGCACATTAACGGCCTGAG...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCTTGTGCTTGGCTCACTaGATTCAAGTGCCACATTAC +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGALCLAH*IQVPHY
Trigger: GTAATGTGGCACTTGAATGCAGTGAGCCAAGCACAA...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCAGAGGTGCCATTGGTaGCTGCCCGTTCACCAAAGT +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFQRCHW*LPVHQS
Trigger: ACTTTGGTGAACGGGCAGGCACCAATGGCACCTCTG...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATGGTGGTTTTCCATCTaGTTAGCTTTGAAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGWWFSI*LALKLS
Trigger: CGACAGCTTCAAAGCTAAGCAGATGGAAAACCACCA...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTAGAAACAGCCCGGTATaGAGGATGGCTGGGGTCGTA +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFRNSPV*RMAGVV
Trigger: TACGACCCCAGCCATCCTGCATACCGGGCTGTTTCT...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATTCCTGGAGAGAGATATaGCCCAGGATAACTGTGCAT +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNSWREI*PRITVH
Trigger: ATGCACAGTTATCCTGGGGCATATCTCTCTCCAGGA...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCGGATGGAGAGTAAGGTaGCTCATGTATTGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSGWRVR*LMYCPH
Trigger: GTGAGGACAATACATGAGCCACCTTACTCTCCATCC...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306315.9
CDS-3UTR CCA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGATCACTTTTGATTTGCTaGTCTCTTTGTGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: LISFTEWFATWQQTLCVRSLLIC*SLCVNS
Trigger: GGAATTCACACAAAGAGACCAGCAAATCAAAAGTGA...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGCTCTGGCTTTTACCTaGCTTCTCCTCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTALAFT*LLLFAF
Trigger: AAAAGCAAAGAGGAGAAGCCAGGTAAAAGCCAGAGC...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCGTGCTTGTCCTTCCTaGATTTCCCCGCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTRACPS*ISPHPY
Trigger: ATAAGGATGCGGGGAAATCCAGGAAGGACAAGCACG...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATCGTGCTTGTCCTTCCTaGATTTCCCCGCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYRACPS*ISPHPY
Trigger: ATAAGGATGCGGGGAAATCCAGGAAGGACAAGCACG...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000613878.4
CDS-3UTR CCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTGGGCCCAAGACACTCTaGCTCTGTCACTACTCCAAC +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFGPKTL*LCHYSN
Trigger: GTTGGAGTAGTGACAGAGCCAGAGTGTCTTGGGCCC...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCACCAATAATGGAACCTaGGCCATTGCTCATCAGCTC +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFTNNGT*AIAHQL
Trigger: GAGCTGATGAGCAATGGCCCAGGTTCCATTATTGGT...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACTGGGCTTTGGTTGAATaGGTTTTAACGGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHWALVE*VLTEDS
Trigger: AGAGTCCTCCGTTAAAACCCATTCAACCAAAGCCCA...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCTAGTTTCCCCAGCTTaGCATCCATTTTTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSLVSPA*HPFLGF
Trigger: GAAGCCCAAAAATGGATGCCAAGCTGGGGAAACTAG...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATCAGGTAAATCTTTGCTaGCCCCCTTGGAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYQVNLC*PPWSPL
Trigger: TAGAGGACTCCAAGGGGGCCAGCAAAGATTTACCTG...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATGCTGCTGCTGGTGATTaGAGAGAAGCTGCGATTTAC +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYAAAGD*REAAIY
Trigger: GTAAATCGCAGCTTCTCTCCAATCACCAGCAGCAGC...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCAGGATAATGAAATCCTaGAGAGAGATATGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGARIMKS*REICPR
Trigger: CCTGGGGCATATCTCTCTCCAGGATTTCATTATCCT...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATTTCCTTTACTGAGTaGTTTGCGACGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNISFTE*FATWQQ
Trigger: CTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGTGGTACGCAGGCTATTaGGTTATTTGCCATTCAAGA +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVWYAGY*VICHSR
Trigger: TCTTGAATGGCAAATAACCCAATAGCCTGCGTACCA...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
3UTR CAA 72 bp TCTTTCGATCATCATTTTTCAGCTTGCTCTCCTCCATaGATTGAGAATCAGGATGCTTGGCCTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SFDHHFSACSPP*IENQDAWPLWA
Trigger: AGCCCAAAGAGGCCAAGCATCCTGATTCTCAATCAATGGAGGAGAGCAAGCTGAAAAATGATGATCGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCTTGCTCTCCACTTTTCTTTGGAGATaGGGGGACATTCGTTTATCT +
Preference number: 4 (lower is better)
Translates to: ESFQFTGVFRSSFFSLLSTFLWR*GDIRLS
Trigger: AGATAAACGAATGTCCCCTCATCTCCAAAGAAAAGT...GGAGAGCAAGCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCAACTTCACATGTATTaGCACCCACAGAACGAGTCC +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTQLHMY*HPQNES
Trigger: GGACTCGTTCTGTGGGTGTCAATACATGTGAAGTTG...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACCTCTTTGGTGTAGCCTaGACAACAGTTGTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNLFGVA*TTVVVR
Trigger: CCTCACAACAACTGTTGTTCAGGCTACACCAAAGAG...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACCTTTTTGTCTTTGAGTaGCACCAGAGCTGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNLFVFE*HQSWVH
Trigger: GTGAACCCAGCTCTGGTGTCACTCAAAGACAAAAAG...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATCTTTTTGTCTTTGAGTaGCACCAGAGCTGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYLFVFE*HQSWVH
Trigger: GTGAACCCAGCTCTGGTGTCACTCAAAGACAAAAAG...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCTTGCTCTCCTCCATTaGTTGAGAATCAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSLALLH*LRIRML
Trigger: AAGCATCCTGATTCTCAATCAATGGAGGAGAGCAAG...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGTTAACACCATGGAACTaGTGTCTGTATAAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVLTPWN*CLYKAL
Trigger: AAGCGCTTTATACAGACATCAGTTCCATGGTGTTAA...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACTTTAATTTCCTTTACTaGGTGGTTTGCGACGTGGCA +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHFNFLY*VVCDVA
Trigger: TGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAA...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCTTTAATTTCCTTTACTaGGTGGTTTGCGACGTGGCA +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGAFNFLY*VVCDVA
Trigger: TGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAA...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTTGGTGCTGGTACTATTaGTGTTTGGGTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFWCWYY*CLGCRC
Trigger: GCAGCGGCAACCCAAACAGCAATAGTACCAGCACCA...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCGCTGTAGTTGAAGAATaGCCTTTTACAACACTGTCC +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGAAVVEE*PFTTLS
Trigger: GGACAGTGTTGTAAAAGGGCATTCTTCAACTACAGC...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATTCCTGGAGAGAGATATaGCCCAGGATAACTGTGCAT +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYSWREI*PRITVH
Trigger: ATGCACAGTTATCCTGGGGCATATCTCTCTCCAGGA...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATTATTGGTTAGCATGCTaGTGGAGCAAATCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNYWLAC*WSKSSA
Trigger: AGCACTGGATTTGCTCCAGCAGCATGCTAACCAATA...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCGGTATTGGTTAGCATaGTGCTGGAGCAAATCCAGT +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTRYWLA*CWSKSS
Trigger: ACTGGATTTGCTCCAGCAGCATGCTAACCAATACCG...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGGTACTGGCAACCCCATaGCTTCCAAAAGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARVLATP*LPKVLF
Trigger: AAAAAGTACTTTTGGAAGGCATGGGGTTGCCAGTAC...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR GCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACGTACTGGCAACCCCATaGCTTCCAAAAGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHVLATP*LPKVLF
Trigger: AAAAAGTACTTTTGGAAGGCATGGGGTTGCCAGTAC...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGACAGAGGTGCTGGTGCTaGTACTATTGCTGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGQRCWC*YYCCLG
Trigger: ACCCAAACAGCAATAGTACCAGCACCAGCACCTCTG...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCACCTCCATTGCTCTTaGCCCCAAAGCCATAGAGGT +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFHLHCS*PQSHRG
Trigger: ACCTCTATGGCTTTGGGGCCAAGAGCAATGGAGGTG...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCCCGGTGCTGCAATATTaGATGAAGATGGGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFPVLQY*MKMGKS
Trigger: ACTTTTCCCCATCTTCATCCAATATTGCAGCACCGG...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGCCGGTGCTGCAATATTaGATGAAGATGGGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWPVLQY*MKMGKS
Trigger: ACTTTTCCCCATCTTCATCCAATATTGCAGCACCGG...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGCAGGTCCAGCTCCATTaGAGGCTTGTTTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWQVQLH*RLVFPF
Trigger: AAAAGGAAAAACAAGCCTCCAATGGAGCTGGACCTG...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGAGATACACTTGTGCTTaGCTCACTGCATTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWRYTCA*LTAFKC
Trigger: GCACTTGAATGCAGTGAGCCAAGCACAAGTGTATCT...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATAGATACACTTGTGCTTaGCTCACTGCATTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNRYTCA*LTAFKC
Trigger: GCACTTGAATGCAGTGAGCCAAGCACAAGTGTATCT...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCACGCAGCCGTCATGTTaGAGATTACTGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTTQPSC*RLLEGC
Trigger: ACAACCTTCCAGTAATCTCCAACATGACGGCTGCGT...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCGGCCCTAGTTTAGAATaGTTTTTGTTAGGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSGPSLE*FLLGSG
Trigger: TCCGGAGCCTAACAAAAACCATTCTAAACTAGGGCC...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTTTTAAATCTCGAGGTTaGGTCTACACCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTFKSRG*VYTCLL
Trigger: AAGCAGACAGGTGTAGACCCAACCTCGAGATTTAAA...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATTGGTTAGCATGCTGCTaGAGCAAATCCAGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNWLACC*SKSSAL
Trigger: TAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCA...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTCTGTGTGTGCGAGCCTaGTTACTGATACAAAAAGTA +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTLCVRA*LLIQKV
Trigger: TACTTTTTGTATCAGTAACCAGGCTCGCACACACAG...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCAGTTTTTGTGGTACTaGCAACCCCATGCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTQFLWY*QPHAFQ
Trigger: TTGGAAGGCATGGGGTTGCCAGTACCACAAAAACTG...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCACAACACAGTTTTTGTaGTACTGGCAACCCCATGCC +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTTTQFL*YWQPHA
Trigger: GGCATGGGGTTGCCAGTACCACAAAAACTGTGTTGT...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGAATCACAGATGTCTCTaGTACGCAGGCTATTGGGTT +
Preference number: 4 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWNHRCL*YAGYWV
Trigger: AACCCAATAGCCTGCGTACCAGAGACATCTGTGATT...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTACTTTTCTTTGGAGATaGGGGGACATTCGTTTATCT +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTTFLWR*GDIRLS
Trigger: AGATAAACGAATGTCCCCTCATCTCCAAAGAAAAGT...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GTTAACGATACAGGAAGGCTGGGCACACCACTCTCTTTATTAGGAGTTTTCCTCTCTATCAAGTTCTTCTaGCTTTTGCTGATCCAGATA +
Preference number: 4 (lower is better)
Translates to: VNDTGRLGTPLSLLGVFLSIKFF*LLLIQI
Trigger: TATCTGGATCAGCAAAAGTCAGAAGAACTTGATAGA...GAGGAAAACTCCTAATAAAGAGAGTGGTGTGCCCAGCCTTCCTGTATCGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATTGTGATCCAGTCACATaGCAATGTACATGTCCAATC +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNCDPVT*QCTCPI
Trigger: GATTGGACATGTACATTGTCATGTGACTGGATCACA...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCTTTAATTTCCTTTACTaGGTGGTTTGCGACGTGGCA +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFFNFLY*VVCDVA
Trigger: TGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAA...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR TCA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTCTTATGGGAAATATGTaGAGGATATGCAAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: FLRGLWEICEGYARFRHTLMGNM*RICKVQ
Trigger: CTGAACCTTGCATATCCTTCACATATTTCCCATAAG...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATCTTATGGGAAATATGTaGAGGATATGCAAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHLMGNM*RICKVQ
Trigger: CTGAACCTTGCATATCCTTCACATATTTCCCATAAG...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATCTCAGGCCGTTAATGTaGTTGTACTTTTTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNLRPLM*LYFLLQ
Trigger: CTGCAACAAAAAGTACAAGCACATTAACGGCCTGAG...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATCTCACTGCATTCAAGTaGCACATTACTCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNLTAFK*HITQSF
Trigger: GAAGGATTGAGTAATGTGGCACTTGAATGCAGTGAG...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACTTGTGCTTGGCTCACTaGATTCAAGTGCCACATTAC +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNLCLAH*IQVPHY
Trigger: GTAATGTGGCACTTGAATGCAGTGAGCCAAGCACAA...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCATATAGAGCCCATATaGATACTGGCCATAATAAAG +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVHIEPI*ILAIIK
Trigger: CTTTATTATGGCCAGTATGCATATGGGCTCTATATG...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACTATTGGTTAGCATGCTaGTGGAGCAAATCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNYWLAC*WSKSSA
Trigger: AGCACTGGATTTGCTCCAGCAGCATGCTAACCAATA...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATCCGGTGCTGCAATATTaGATGAAGATGGGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYPVLQY*MKMGKS
Trigger: ACTTTTCCCCATCTTCATCCAATATTGCAGCACCGG...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTTATTGTCCTCAGAGCTaGAGTTCAGGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFYCPQS*SSGPAP
Trigger: TGGAGCTGGACCTGAACTCCAGCTCTGAGGACAATA...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACTGGGCTTTGGTTGAATaGGTTTTAACGGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNWALVE*VLTEDS
Trigger: AGAGTCCTCCGTTAAAACCCATTCAACCAAAGCCCA...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCTATCTGATGGGGAACTaGCCTTTGATCTCATACCCT +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTYLMGN*PLISYP
Trigger: AGGGTATGAGATCAAAGGCCAGTTCCCCATCAGATA...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGAGAGCTTTTGAGATTGTaGCCGATGGCATATTTTTCT +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGELLRL*PMAYFS
Trigger: AGAAAAATATGCCATCGGCCACAATCTCAAAAGCTC...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGGAGCTTTTGAGATTGTaGCCGATGGCATATTTTTCT +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARELLRL*PMAYFS
Trigger: AGAAAAATATGCCATCGGCCACAATCTCAAAAGCTC...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACAGGATAATGAAATCCTaGAGAGAGATATGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNRIMKS*REICPR
Trigger: CCTGGGGCATATCTCTCTCCAGGATTTCATTATCCT...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCAGGAACATTTTACACTaGTGCGTCTTTAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSRNILH*CVFNRS
Trigger: GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCT...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGACAGTTTTTGTGGTACTaGCAACCCCATGCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGQFLWY*QPHAFQ
Trigger: TTGGAAGGCATGGGGTTGCCAGTACCACAAAAACTG...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCTGGTACGCAGGCTATTaGGTTATTTGCCATTCAAGA +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFWYAGY*VICHSR
Trigger: TCTTGAATGGCAAATAACCCAATAGCCTGCGTACCA...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR TCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCAACTTCACATGTATTaGCACCCACAGAACGAGTCC +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFQLHMY*HPQNES
Trigger: GGACTCGTTCTGTGGGTGTCAATACATGTGAAGTTG...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACTCTATCAAGTTCTTCTaGCTTTTGCTGATCCAGATA +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHSIKFF*LLLIQI
Trigger: TATCTGGATCAGCAAAAGTCAGAAGAACTTGATAGA...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCTCTATCAAGTTCTTCTaGCTTTTGCTGATCCAGATA +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGASIKFF*LLLIQI
Trigger: TATCTGGATCAGCAAAAGTCAGAAGAACTTGATAGA...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCTTAACACCATGGAACTaGTGTCTGTATAAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSLTPWN*CLYKAL
Trigger: AAGCGCTTTATACAGACATCAGTTCCATGGTGTTAA...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACGCTGTAGTTGAAGAATaGCCTTTTACAACACTGTCC +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNAVVEE*PFTTLS
Trigger: GGACAGTGTTGTAAAAGGGCATTCTTCAACTACAGC...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCTTCGTTTATCTCCGCTaGGCTTTCTCTCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSFVYLR*AFSQRK
Trigger: TTTTCTTTGAGAGAAAGCCCAGCGGAGATAAACGAA...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000613878.4
CDS-3UTR CCA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTCACTTTTGATTTGCTaGTCTCTTTGTGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: SQLAFLRGLWEICEGYARSLLIC*SLCVNS
Trigger: GGAATTCACACAAAGAGACCAGCAAATCAAAAGTGA...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACTCACTTTTGATTTGCTaGTCTCTTTGTGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHSLLIC*SLCVNS
Trigger: GGAATTCACACAAAGAGACCAGCAAATCAAAAGTGA...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGAGCTCTGGCTTTTACCTaGCTTCTCCTCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGALAFT*LLLFAF
Trigger: AAAAGCAAAGAGGAGAAGCCAGGTAAAAGCCAGAGC...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000613878.4
CDS-3UTR CCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGACATGTTGGAGATTACTaGAAGGTTGTTCAGTTCATT +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGHVGDY*KVVQFI
Trigger: AATGAACTGAACAACCTTCCAGTAATCTCCAACATG...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCAAGGATGCAGAATTGTaGTCCACTTTCTTAGAATCT +
Preference number: 4 (lower is better)
Translates to: VQTVTTGTFYTGASLTGAKDAEL*STFLES
Trigger: AGATTCTAAGAAAGTGGACCACAATTCTGCATCCTT...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGAGCTGATCCAGATATTTaGGCTGGTATACATAATGAT +
Preference number: 4 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGADPDI*AGIHND
Trigger: ATCATTATGTATACCAGCCCAAATATCTGGATCAGC...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGATGGTTAGCATGCTGCTaGAGCAAATCCAGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGWLACC*SKSSAL
Trigger: TAAAGCACTGGATTTGCTCCAGCAGCATGCTAACCA...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGGTAAGTAGCCTTTTGTaGCTAACACTTTTTAACATG +
Preference number: 4 (lower is better)
Translates to: FLISFTEWFATWQQTLCVVSSLL*LTLFNM
Trigger: CATGTTAAAAAGTGTTAGCCACAAAAGGCTACTTAC...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp GAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCTTGCTCTCCGTAAGTAGCCTTTTGTaGCTAACACTTTTTAACATG +
Preference number: 4 (lower is better)
Translates to: ESFQFTGVFRSSFFSLLSVSSLL*LTLFNM
Trigger: CATGTTAAAAAGTGTTAGCCACAAAAGGCTACTTAC...GGAGAGCAAGCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTACAACACAGTTTTTGTaGTACTGGCAACCCCATGCC +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFTTQFL*YWQPHA
Trigger: GGCATGGGGTTGCCAGTACCACAAAAACTGTGTTGT...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTAACAGGGGGTCAACCTaGCTTCTCCTCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFNRGST*LLLFAF
Trigger: AAAAGCAAAGAGGAGAAGCCAGGTTGACCCCCTGTT...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504926.5
CDS-3UTR TCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGATGATGCCATGTTCTTaGATCTGGGTCTTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWMMPCS*IWVLFK
Trigger: TTTAAACAAGACCCAGATTCAAGAACATGGCATCAT...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTTGCTCTCCTCCATTaGTTGAGAATCAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFLALLH*LRIRML
Trigger: AAGCATCCTGATTCTCAATCAATGGAGGAGAGCAAG...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATTTAACACCATGGAACTaGTGTCTGTATAAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYLTPWN*CLYKAL
Trigger: AAGCGCTTTATACAGACATCAGTTCCATGGTGTTAA...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACTTAACACCATGGAACTaGTGTCTGTATAAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNLTPWN*CLYKAL
Trigger: AAGCGCTTTATACAGACATCAGTTCCATGGTGTTAA...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTTGGTGGTTTTCCATCTaGTTAGCTTTGAAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFWWFSI*LALKLS
Trigger: CGACAGCTTCAAAGCTAAGCAGATGGAAAACCACCA...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR GCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATGAAATGACTGGTTTTTaGCTGCCATTAAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYEMTGF*LPLRHF
Trigger: GAAATGCCTTAATGGCAGGCAAAAACCAGTCATTTC...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTGCTCTGGCTTTTACCTaGCTTCTCCTCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFALAFT*LLLFAF
Trigger: AAAAGCAAAGAGGAGAAGCCAGGTAAAAGCCAGAGC...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCGCTGATCCAGATATTTaGGCTGGTATACATAATGAT +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFADPDI*AGIHND
Trigger: ATCATTATGTATACCAGCCCAAATATCTGGATCAGC...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCTTTCTGAGGGGCTTATaGGAAATATGTGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: STNSDYRNILHWCVFNRSFLRGL*EICEGY
Trigger: ATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGTTTCTGAGGGGCTTATaGGAAATATGTGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWFLRGL*EICEGY
Trigger: ATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACATGATGCCATGTTCTTaGATCTGGGTCTTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNMMPCS*IWVLFK
Trigger: TTTAAACAAGACCCAGATTCAAGAACATGGCATCAT...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR TCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTTGTGATCCAGTCACATaGCAATGTACATGTCCAATC +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFCDPVT*QCTCPI
Trigger: GATTGGACATGTACATTGTCATGTGACTGGATCACA...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR TCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTTTTAATTTCCTTTACTaGGTGGTTTGCGACGTGGCA +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFFNFLY*VVCDVA
Trigger: TGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAA...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATCATGTTGGAGATTACTaGAAGGTTGTTCAGTTCATT +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYHVGDY*KVVQFI
Trigger: AATGAACTGAACAACCTTCCAGTAATCTCCAACATG...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CCA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACGCTGATCCAGATATTTaGGCTGGTATACATAATGAT +
Preference number: 4 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNADPDI*AGIHND
Trigger: ATCATTATGTATACCAGCCCAAATATCTGGATCAGC...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCGCTGATCCAGATATTTaGGCTGGTATACATAATGAT +
Preference number: 4 (lower is better)
Translates to: TNTFLISFTEWFATWQQTADPDI*AGIHND
Trigger: ATCATTATGTATACCAGCCCAAATATCTGGATCAGC...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCGTAAGTAGCCTTTTGTaGCTAACACTTTTTAACATG +
Preference number: 4 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFVSSLL*LTLFNM
Trigger: CATGTTAAAAAGTGTTAGCCACAAAAGGCTACTTAC...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATTTTCTGAGGGGCTTATaGGAAATATGTGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYFLRGL*EICEGY
Trigger: ATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTAGGAACATTTTACACTaGTGCGTCTTTAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFRNILH*CVFNRS
Trigger: GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCT...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR GCA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTGAAATGACTGGTTTTTaGCTGCCATTAAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFEMTGF*LPLRHF
Trigger: GAAATGCCTTAATGGCAGGCAAAAACCAGTCATTTC...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CCA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATAGGGTGCATGTAACTTaGAGAATAATAAGGATCATA +
Preference number: 4 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYRVHVT*RIIRII
Trigger: TATGATCCTTATTATTCTCCAAGTTACATGCACCCT...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS CCA 90 bp TGCTTTTCCCACAGGAGCCTGCCCCCGCGGTGGCGGCAGAGGTGCTaGTGCTGGTACTATTGCTGTTTGGGTTGCCGCTGCCGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: CFSHRSLPPRWRQRC*CWYYCCLGCRCRRC
Trigger: GCAGCGGCGGCAGCGGCAACCCAAACAGCAATAGTACCAGCACCAGCACCTCTGCCGCCACCGCGGGGGCAGGCTCCTGTGGGAAAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS GCA 90 bp AGCCTGCCCCCGCGGTGGCGGCAGAGGTGCTGGTGCTGGTACTATTaGTGTTTGGGTTGCCGCTGCCGCCGCTGCTCACACTTTGACCCA +
Preference number: 5 (lower is better)
Translates to: SLPPRWRQRCWCWYY*CLGCRCRRCSHFDP
Trigger: TGGGTCAAAGTGTGAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATAGTACCAGCACCAGCACCTCTGCCGCCACCGCGGGGGCAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS GCA 90 bp TTTTCCCACAGGAGCCTGCCCCCGCGGTGGCGGCAGAGGTGCTGGTaGTGGTACTATTGCTGTTTGGGTTGCCGCTGCCGCCGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: FSHRSLPPRWRQRCW*WYYCCLGCRCRRCS
Trigger: TGAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATAGTACCAGCACCAGCACCTCTGCCGCCACCGCGGGGGCAGGCTCCTGTGGGAAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS GCA 90 bp TGCCGCTGCCGCCGCTGCTCACACTTTGACCCAGCGCTGAATTCATaGCAGTTGCCTCTCCAGGGCGCCCTTGGACTTCCTGCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: CRCRRCSHFDPALNS*QLPLQGALGLPASC
Trigger: GCAAGAGGCAGGAAGTCCAAGGGCGCCCTGGAGAGGCAACTGGCATGAATTCAGCGCTGGGTCAAAGTGTGAGCAGCGGCGGCAGCGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS TCA 90 bp GTTTGGGTTGCCGCTGCCGCCGCTGCTCACACTTTGACCCAGCGCTaGATTCATGCCAGTTGCCTCTCCAGGGCGCCCTTGGACTTCCTG +
Preference number: 5 (lower is better)
Translates to: VWVAAAAAAHTLTQR*IHASCLSRAPLDFL
Trigger: CAGGAAGTCCAAGGGCGCCCTGGAGAGGCAACTGGCATGAATTCAGCGCTGGGTCAAAGTGTGAGCAGCGGCGGCAGCGGCAACCCAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS-3UTR CAA 90 bp CATTCCAGATGCAGATGCCTGGGCAGCCACCTGCTGAGAGGCAACAAGGGCAGCCTATTGCTGTTTGGGTaGCCGCTGCCGCCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: HSRCRCLGSHLLRGNKGSLLLFG*PLPPLL
Trigger: GAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATAG...GCTGCCCTTGTTGCCTCTCAGCAGGTGGCTGCCCAGGCATCTGCATCTGGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GGACGGGAGAAACAGCCCGGTATGCAGGATGGCTGGGGTCGTACATCTGTGGGTGGGGCCCAGTCGTGCTaGGTGCAGTCCAGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: GREKQPGMQDGWGRTSVGGAQSC*VQSSRV
Trigger: AACCCTACTGGACTGCACCAAGCACGACTGGGCCCC...ACCCACAGATGTACGACCCCAGCCATCCTGCATACCGGGCTGTTTCTCCCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS GCA 90 bp ACACATGCAGAGGTGCCATTGGTGCCTGCCCGTTCACCAAAGTGCTaGATTCCAGCCTCGAGGCGCTCCCTATGGAAGGGCTGGGAGCGT +
Preference number: 5 (lower is better)
Translates to: THAEVPLVPARSPKC*IPASRRSLWKGWER
Trigger: ACGCTCCCAGCCCTTCCATAGGGAGCGCCTCGAGGCTGGAATGCAGCACTTTGGTGAACGGGCAGGCACCAATGGCACCTCTGCATGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS TCA 90 bp GTACTATTGCTGTTTGGGTTGCCGCTGCCGCCGCTGCTCACACTTTaGCCCAGCGCTGAATTCATGCCAGTTGCCTCTCCAGGGCGCCCT +
Preference number: 5 (lower is better)
Translates to: VLLLFGLPLPPLLTL*PSAEFMPVASPGRP
Trigger: AGGGCGCCCTGGAGAGGCAACTGGCATGAATTCAGCGCTGGGTCAAAGTGTGAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATAGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS GCA 90 bp TCAACACATGCAGAGGTGCCATTGGTGCCTGCCCGTTCACCAAAGTaGTGCATTCCAGCCTCGAGGCGCTCCCTATGGAAGGGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: STHAEVPLVPARSPK*CIPASRRSLWKGWE
Trigger: CTCCCAGCCCTTCCATAGGGAGCGCCTCGAGGCTGGAATGCAGCACTTTGGTGAACGGGCAGGCACCAATGGCACCTCTGCATGTGTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS GCA 90 bp TCTGCCCCATTCTGGGTCAACACATGCAGAGGTGCCATTGGTGCCTaGCCGTTCACCAAAGTGCTGCATTCCAGCCTCGAGGCGCTCCCT +
Preference number: 5 (lower is better)
Translates to: SAPFWVNTCRGAIGA*PFTKVLHSSLEALP
Trigger: AGGGAGCGCCTCGAGGCTGGAATGCAGCACTTTGGTGAACGGGCAGGCACCAATGGCACCTCTGCATGTGTTGACCCAGAATGGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS-3UTR CAA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAACTCTCCAGGGCGCCCTaGGACTTCCTGCCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQLSRAP*DFLPLA
Trigger: GGCAAGAGGCAGGAAGTCCAAGGGCGCCCTGGAGAG...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS GCA 90 bp ACTCTCTGCCCCATTCTGGGTCAACACATGCAGAGGTGCCATTGGTaGCTGCCCGTTCACCAAAGTGCTGCATTCCAGCCTCGAGGCGCT +
Preference number: 5 (lower is better)
Translates to: TLCPILGQHMQRCHW*LPVHQSAAFQPRGA
Trigger: AGCGCCTCGAGGCTGGAATGCAGCACTTTGGTGAACGGGCAGGCACCAATGGCACCTCTGCATGTGTTGACCCAGAATGGGGCAGAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS-3UTR CAA 90 bp CTTTTCCACAGGAGCAGGAGACTTGCTGCGGTATTGGTTAGCATGCTGCTGGAGCTCTCCAGGGCGCCCTaGGACTTCCTGCCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: LFHRSRRLAAVLVSMLLELSRAP*DFLPLA
Trigger: GGCAAGAGGCAGGAAGTCCAAGGGCGCCCTGGAGAG...CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGTGGAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR CAA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCCTCGCGCCACCTCCATaGCTCTTGGCCCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: ISFTEWFATWQQTLCVRALAPPP*LLAPKP
Trigger: TGGCTTTGGGGCCAAGAGCAATGGAGGTGGCGCGAG...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCGGGGCCCAGTCGTGCTaGGTGCAGTCCAGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAGAQSC*VQSSRV
Trigger: AACCCTACTGGACTGCACCAAGCACGACTGGGCCCC...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGGGCCCAGTCGTGCTaGGTGCAGTCCAGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPGAQSC*VQSSRV
Trigger: AACCCTACTGGACTGCACCAAGCACGACTGGGCCCC...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS GCA 90 bp GCTGAATTCATGCCAGTTGCCTCTCCAGGGCGCCCTTGGACTTCCTaGCTCTTGCCAGTGCTGCTGATCTCGGGAATCCCATACAAGGCA +
Preference number: 5 (lower is better)
Translates to: AEFMPVASPGRPWTS*LLPVLLISGIPYKA
Trigger: TGCCTTGTATGGGATTCCCGAGATCAGCAGCACTGGCAAGAGGCAGGAAGTCCAAGGGCGCCCTGGAGAGGCAACTGGCATGAATTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS GCA 90 bp TGCTGGTGCTGGTACTATTGCTGTTTGGGTTGCCGCTGCCGCCGCTaGTCACACTTTGACCCAGCGCTGAATTCATGCCAGTTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: CWCWYYCCLGCRCRR*SHFDPALNSCQLPL
Trigger: GAGAGGCAACTGGCATGAATTCAGCGCTGGGTCAAAGTGTGAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATAGTACCAGCACCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS-3UTR CAA 90 bp GGACGGGAGAAACAGCCCGGTATGCAGGATGGCTGGGGTCGTACATCTGTGGGTCCACAATCCTTGGAGTaGCTGCTACTAGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GREKQPGMQDGWGRTSVGPQSLE*LLLVVV
Trigger: CACCACCACTAGTAGCAGCAACTCCAAGGATTGTGG...ACCCACAGATGTACGACCCCAGCCATCCTGCATACCGGGCTGTTTCTCCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCCCTCAGCAGCACAATTaGGGGGTGTCCTTCGTCCGC +
Preference number: 5 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAPQQHN*GVSFVR
Trigger: GCGGACGAAGGACACCCCCAAATTGTGCTGCTGAGG...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTAGGGCAGTCCGGGTATaGTCCCAGTGGTGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPRAVRV*SQWWSL
Trigger: CAACGACCACCACTGGGACAATACCCGGACTGCCCT...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS GCA 90 bp TCCCTTTGGGGTCCCAGGTGGGTTTCCAGCACCAGGGGATGCCGGTaGCTTCAACTGGTCATAAGCAGATACACTTGTGCTTGGCTCACT +
Preference number: 5 (lower is better)
Translates to: SLWGPRWVSSTRGCR*LQLVISRYTCAWLT
Trigger: AGTGAGCCAAGCACAAGTGTATCTGCTTATGACCAGTTGAAGGCACCGGCATCCCCTGGTGCTGGAAACCCACCTGGGACCCCAAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CCA 90 bp AATAATGGAACCTGGGCCATTGCTCATCAGCTCTCTCTTTCCCTTTaGGGTCCCAGGTGGGTTTCCAGCACCAGGGGATGCCGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: NNGTWAIAHQLSLSL*GPRWVSSTRGCRCL
Trigger: AAGGCACCGGCATCCCCTGGTGCTGGAAACCCACCTGGGACCCCAAAGGGAAAGAGAGAGCTGATGAGCAATGGCCCAGGTTCCATTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS-3UTR CAA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGAATCCGGGGCACTTTaGCTAACTTCCCCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPESGAL*LTSPAA
Trigger: CGCTGCAGGGGAAGTTAGCAAAAGTGCCCCGGATTC...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGCTCTCTCTTTCCCTTaGGGGTCCCAGGTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPALSFP*GSQVGF
Trigger: GAAACCCACCTGGGACCCCAAAGGGAAAGAGAGAGC...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTCTTTGCTGGCCCCCTaGGAGTCCTCTAGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: ISFTEWFATWQQTLCVRASLLAP*ESSSFP
Trigger: GGGGAAACTAGAGGACTCCAAGGGGGCCAGCAAAGA...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTAGGAGACAGCCACTCTaGTTCCCCGAGAGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPRRQPL*FPESPS
Trigger: GGAAGGACTCTCGGGGAACAAGAGTGGCTGTCTCCT...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp CAGAGGTCAAGCAGCAGGAGACTTGCTGCGGTATTGGTTAGCATGCTGCTGGAGCCTTTACTGAGTGGTTaGCGACGTGGCAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: QRSSSRRLAAVLVSMLLEPLLSG*RRGSRP
Trigger: GGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGG...CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCTCCTGCTGCTTGACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505686.5
CDS GCA 90 bp TCTCTTTCCCTTTGGGGTCCCAGGTGGGTTTCCAGCACCAGGGGATaGCGGTGCCTTCAACTGGTCATAAGCAGATACACTTGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: SLSLWGPRWVSSTRG*RCLQLVISRYTCAW
Trigger: CCAAGCACAAGTGTATCTGCTTATGACCAGTTGAAGGCACCGGCATCCCCTGGTGCTGGAAACCCACCTGGGACCCCAAAGGGAAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS-3UTR CAA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTCCTGGCTTCTCCTCTTaGCTTTTCCCACAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPPGFSS*LFPQEP
Trigger: AGGCTCCTGTGGGAAAAGCAAAGAGGAGAAGCCAGG...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCCCTGGCTTCTCCTCTTaGCTTTTCCCACAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAPGFSS*LFPQEP
Trigger: AGGCTCCTGTGGGAAAAGCAAAGAGGAGAAGCCAGG...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTCAGGGCAGGATGTCTTaGTGTGATCACCGACTGGTG +
Preference number: 5 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPQGRMS*CDHRLV
Trigger: CACCAGTCGGTGATCACACAAAGACATCCTGCCCTG...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS GCA 90 bp CTTGTCTTTGCAGCTGAACTCTCTGCCCCATTCTGGGTCAACACATaGAGAGGTGCCATTGGTGCCTGCCCGTTCACCAAAGTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: LVFAAELSAPFWVNT*RGAIGACPFTKVLH
Trigger: ATGCAGCACTTTGGTGAACGGGCAGGCACCAATGGCACCTCTGCATGTGTTGACCCAGAATGGGGCAGAGAGTTCAGCTGCAAAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS GCA 90 bp CTCCTTCTTGATCTTCATTCCCTGCGTGCTCCCACTATTTCCAGCTaGAGGGGCACCGACCTGCCCAGGGTGCATGTAACTTGGAGAATA +
Preference number: 5 (lower is better)
Translates to: LLLDLHSLRAPTISS*RGTDLPRVHVTWRI
Trigger: TATTCTCCAAGTTACATGCACCCTGGGCAGGTCGGTGCCCCTGCAGCTGGAAATAGTGGGAGCACGCAGGGAATGAAGATCAAGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS-3UTR CAA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAGGACCTCCACAATCCTaGGAGTTGCTGCTACTAGTG +
Preference number: 5 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQGPPQS*ELLLLV
Trigger: CACTAGTAGCAGCAACTCCAAGGATTGTGGAGGTCC...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAATGGACTTCCTGCCTCTaGCCAGTGCTGCTGATCTCG +
Preference number: 5 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKWTSCL*PVLLIS
Trigger: CGAGATCAGCAGCACTGGCAAGAGGCAGGAAGTCCA...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAACTGAATTCATGCCAGTaGCCTCTCCAGGGCGCCCTT +
Preference number: 5 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKLNSCQ*PLQGAL
Trigger: AAGGGCGCCCTGGAGAGGCAACTGGCATGAATTCAG...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCCGCTTTCCAGGCTTATaGTCCTCAGAGCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: ISFTEWFATWQQTLCVRARFPGL*SSELEF
Trigger: GAACTCCAGCTCTGAGGACAATAAGCCTGGAAAGCG...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp AGCCTTGAAAAGGGTCATATTGACCCGGGATTAGCGGGTAACCCATGCCAACGTCCTTTACTGAGTGGTTaGCGACGTGGCAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: SLEKGHIDPGLAGNPCQRPLLSG*RRGSRP
Trigger: GGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGG...ACGTTGGCATGGGTTACCCGCTAATCCCGGGTCAATATGACCCTTTTCAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTCAAGCAGCAGGAGACTaGCTGCGGTATTGGTTAGCA +
Preference number: 5 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPQAAGD*LRYWLA
Trigger: TGCTAACCAATACCGCAGCAAGTCTCCTGCTGCTTG...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505686.5
CDS-3UTR CAA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGATTTGCTGGTCTCTTaGTGTGAATTCCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPDLLVS*CEFPWG
Trigger: TCCCCAGGGGAATTCACACAAAGAGACCAGCAAATC...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAACCTGGCTTCTCCTCTTaGCTTTTCCCACAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKPGFSS*LFPQEP
Trigger: AGGCTCCTGTGGGAAAAGCAAAGAGGAGAAGCCAGG...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GCTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGTATTGACTTTCGCATCCTTATCCCGCTaGGCGCCTCGGCTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: ALDSVVVFVLTLGLVLTFASLSR*APRLLW
Trigger: CCAGAGCAGCCGAGGCGCCAAGCGGGATAAGGATGC...GAAAGTCAATACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGAATCCGGGGCACTTTaGCTAACTTCCCCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: LISFTEWFATWQQTLCVRESGAL*LTSPAA
Trigger: CGCTGCAGGGGAAGTTAGCAAAAGTGCCCCGGATTC...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCGTTCCCACGTACGTTTaGTTCCTCCACGTGACATTG +
Preference number: 5 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAVPTYV*FLHVTL
Trigger: CAATGTCACGTGGAGGAACAAAACGTACGTGGGAAC...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGCTCGAACTCCAGCTaGTTTTCTGGGTCTAAGTGT +
Preference number: 5 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPGSNSS*FSGSKC
Trigger: ACACTTAGACCCAGAAAACAAGCTGGAGTTCGAGCC...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAATCACAGTCCGAGATCTaGTCCTCACTGTCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKSQSEI*SSLSGS
Trigger: CGAGCCTGACAGTGAGGACAAGATCTCGGACTGTGA...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAATTATCGGCCTCAGCTTaGATACTGGCCATGCGGCTC +
Preference number: 5 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKLSASA*ILAMRL
Trigger: GAGCCGCATGGCCAGTATCAAAGCTGAGGCCGATAA...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCGGATGCTTGGCCTCTTaGGGCTCCTCTTTAATGCTT +
Preference number: 5 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAGCLAS*GSSLML
Trigger: AAGCATTAAAGAGGAGCCCAAAGAGGCCAAGCATCC...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAAGGAGACAGCCACTCTaGTTCCCCGAGAGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LISFTEWFATWQQTLCVRRRQPL*FPESPS
Trigger: GGAAGGACTCTCGGGGAACAAGAGTGGCTGTCTCCT...TCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGTGGTTGTTTTCGTGTaGACGCTAGGGCTGGTATTG +
Preference number: 5 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPVVVFV*TLGLVL
Trigger: CAATACCAGCCCTAGCGTCAACACGAAAACAACCAC...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp AGCCTTGAAAAGGGTCATATTGACCCGGGATTAGCGGGTAACCCATGCCAACGTGGACCTCCACAATCCTaGGAGTTGCTGCTACTAGTG +
Preference number: 5 (lower is better)
Translates to: SLEKGHIDPGLAGNPCQRGPPQS*ELLLLV
Trigger: CACTAGTAGCAGCAACTCCAAGGATTGTGGAGGTCC...ACGTTGGCATGGGTTACCCGCTAATCCCGGGTCAATATGACCCTTTTCAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR CAA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCCTCTCCAGGGCGCCCTaGGACTTCCTGCCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFLSRAP*DFLPLA
Trigger: GGCAAGAGGCAGGAAGTCCAAGGGCGCCCTGGAGAG...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000613878.4
CDS-3UTR CAA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGACTATTGCTGTTTGGGTaGCCGCTGCCGCCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGLLLFG*PLPPLL
Trigger: GAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATAG...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGCATCCTTATCCCGCTaGGCGCCTCGGCTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWASLSR*APRLLW
Trigger: CCAGAGCAGCCGAGGCGCCAAGCGGGATAAGGATGC...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATCTCGCGCCACCTCCATaGCTCTTGGCCCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHLAPPP*LLAPKP
Trigger: TGGCTTTGGGGCCAAGAGCAATGGAGGTGGCGCGAG...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAATCAGTTTTCAGTTTCTaGATTCGCCTGTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQSVFSF*IRLWLS
Trigger: GGAGAGCCACAGGCGAATCAAGAAACTGAAAACTGA...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAACCGGTGCTGCAATATaGGATGAAGATGGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQTGAAI*DEDGEK
Trigger: CTTTTCCCCATCTTCATCCAATATTGCAGCACCGGT...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCCCAACTTCACATGTATaGACACCCACAGAACGAGTC +
Preference number: 5 (lower is better)
Translates to: ISFTEWFATWQQTLCVRAPTSHV*TPTERV
Trigger: GACTCGTTCTGTGGGTGTCAATACATGTGAAGTTGG...GGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GCTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGTATTGACTTTCGGGGCCCAGTCGTGCTaGGTGCAGTCCAGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: ALDSVVVFVLTLGLVLTFGAQSC*VQSSRV
Trigger: AACCCTACTGGACTGCACCAAGCACGACTGGGCCCC...GAAAGTCAATACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACCTTCGTCCGCTGGCATaGAGGCTGCCCCGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNLRPLA*RLPRLP
Trigger: AGGGAGGCGGGGCAGCCTCAATGCCAGCGGACGAAG...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGCTTGGCATCCATTTTaGGGCTTCCCGTCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKAWHPF*GFPSLS
Trigger: GGAAAGAGACGGGAAGCCCAAAAATGGATGCCAAGC...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCCGGGCTGCTTGTCTTaGCAGCTGAACTCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: FLISFTEWFATWQQTLCVPGCLS*QLNSLP
Trigger: GGGCAGAGAGTTCAGCTGCAAAGACAAGCAGCCCGG...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS TCA 90 bp GCCCAAGACACTCTGGCTCTGTCACTACTCCAACTTCACATGTATTaGCACCCACAGAACGAGTCCGAACCAAAAGCTGTTCAACCGGTG +
Preference number: 5 (lower is better)
Translates to: AQDTLALSLLQLHMY*HPQNESEPKAVQPV
Trigger: CACCGGTTGAACAGCTTTTGGTTCGGACTCGTTCTGTGGGTGTCAATACATGTGAAGTTGGAGTAGTGACAGAGCCAGAGTGTCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306315.9
ENST00000503896.6
ENST00000504926.5
ENST00000505686.5
ENST00000509799.5
ENST00000511308.1
ENST00000513986.2
ENST00000613878.4
CDS-3UTR CAA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTCCGATGAACTTTTCTTaGGAGATGAGGGGACATTCG +
Preference number: 5 (lower is better)
Translates to: CDVAADPVCASLVTDTKSPMNFS*EMRGHS
Trigger: CGAATGTCCCCTCATCTCCAAAGAAAAGTTCATCGG...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCTATTGCTGTTTGGGTaGCCGCTGCCGCCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: STNSDYRNILHWCVFNRSLLLFG*PLPPLL
Trigger: GAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATAG...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCAGGGCAGTCCGGGTATaGTCCCAGTGGTGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: VQTVTTGTFYTGASLTGARAVRV*SQWWSL
Trigger: CAACGACCACCACTGGGACAATACCCGGACTGCCCT...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGTCTTTGCTGGCCCCCTaGGAGTCCTCTAGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: FLISFTEWFATWQQTLCVSLLAP*ESSSFP
Trigger: GGGGAAACTAGAGGACTCCAAGGGGGCCAGCAAAGA...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCCCGGGCTGCTTGTCTTaGCAGCTGAACTCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: VQTVTTGTFYTGASLTGAPGCLS*QLNSLP
Trigger: GGGCAGAGAGTTCAGCTGCAAAGACAAGCAGCCCGG...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTGCTTGCTCTCCTCCATaGATTGAGAATCAGGATGCT +
Preference number: 5 (lower is better)
Translates to: CDVAADPVCASLVTDTKSACSPP*IENQDA
Trigger: AGCATCCTGATTCTCAATCAATGGAGGAGAGCAAGC...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTAGCAGAGGTCAAGCCTaGAAAAGGGTCATATTGACC +
Preference number: 5 (lower is better)
Translates to: CDVAADPVCASLVTDTKSSRGQA*KRVILT
Trigger: GGTCAATATGACCCTTTTCAAGGCTTGACCTCTGCT...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS TCA 90 bp ACTGGCCATAATAAAGTGACTGAGCCAGGGCAGGATGTCTTTGTGTaGTCACCGACTGGTGCTGAGGCTGTAAGGATGCAGAATTGTGGT +
Preference number: 5 (lower is better)
Translates to: TGHNKVTEPGQDVFV*SPTGAEAVRMQNCG
Trigger: ACCACAATTCTGCATCCTTACAGCCTCAGCACCAGTCGGTGATCACACAAAGACATCCTGCCCTGGCTCAGTCACTTTATTATGGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS GCA 90 bp CAGGGGATGCCGGTGCCTTCAACTGGTCATAAGCAGATACACTTGTaGTTGGCTCACTGCATTCAAGTGCCACATTACTCAATCCTTCCT +
Preference number: 5 (lower is better)
Translates to: QGMPVPSTGHKQIHL*LAHCIQVPHYSILP
Trigger: AGGAAGGATTGAGTAATGTGGCACTTGAATGCAGTGAGCCAAGCACAAGTGTATCTGCTTATGACCAGTTGAAGGCACCGGCATCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CCA 90 bp ATTTCCAGCTGCAGGGGCACCGACCTGCCCAGGGTGCATGTAACTTaGAGAATAATAAGGATCATAGCTGTGGTAATAGGGAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: ISSCRGTDLPRVHVT*RIIRIIAVVIGRMG
Trigger: TCCCATTCTCCCTATTACCACAGCTATGATCCTTATTATTCTCCAAGTTACATGCACCCTGGGCAGGTCGGTGCCCCTGCAGCTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS-3UTR CAA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACTGGACTTCCTGCCTCTaGCCAGTGCTGCTGATCTCG +
Preference number: 5 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHWTSCL*PVLLIS
Trigger: CGAGATCAGCAGCACTGGCAAGAGGCAGGAAGTCCA...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGACTGAATTCATGCCAGTaGCCTCTCCAGGGCGCCCTT +
Preference number: 5 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGLNSCQ*PLQGAL
Trigger: AAGGGCGCCCTGGAGAGGCAACTGGCATGAATTCAG...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTCTGAATTCATGCCAGTaGCCTCTCCAGGGCGCCCTT +
Preference number: 5 (lower is better)
Translates to: FLRGLWEICEGYARFRHTLNSCQ*PLQGAL
Trigger: AAGGGCGCCCTGGAGAGGCAACTGGCATGAATTCAG...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCTGGTGCTGGTACTATaGCTGTTTGGGTTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: FLISFTEWFATWQQTLCVLVLVL*LFGLPL
Trigger: CAGCGGCAACCCAAACAGCAATAGTACCAGCACCAG...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGAGCATCCTTATCCCGCTaGGCGCCTCGGCTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGASLSR*APRLLW
Trigger: CCAGAGCAGCCGAGGCGCCAAGCGGGATAAGGATGC...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000613878.4
CDS-3UTR CAA 90 bp GCTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGTATTGACTTTCGAATCCGGGGCACTTTaGCTAACTTCCCCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: ALDSVVVFVLTLGLVLTFESGAL*LTSPAA
Trigger: CGCTGCAGGGGAAGTTAGCAAAAGTGCCCCGGATTC...GAAAGTCAATACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAACCAACTTCACATGTATaGACACCCACAGAACGAGTC +
Preference number: 5 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKPTSHV*TPTERV
Trigger: GACTCGTTCTGTGGGTGTCAATACATGTGAAGTTGG...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTTCGTCCGCTGGCATaGAGGCTGCCCCGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFLRPLA*RLPRLP
Trigger: AGGGAGGCGGGGCAGCCTCAATGCCAGCGGACGAAG...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGAGTCTCTGGTTTCCCTaGAGGGGTAGTGGGAGTGCT +
Preference number: 5 (lower is better)
Translates to: FLISFTEWFATWQQTLCVSLWFP*RGSGSA
Trigger: AGCACTCCCACTACCCCTCAAGGGAAACCAGAGACT...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATGCCCAGGTAAATCTTaGCTGGCCCCCTTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGCPGKS*LAPLES
Trigger: GGACTCCAAGGGGGCCAGCAAAGATTTACCTGGGCA...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATCATGCAGAGGTGCCATaGGTGCCTGCCCGTTCACCA +
Preference number: 5 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNHAEVP*VPARSP
Trigger: TGGTGAACGGGCAGGCACCAATGGCACCTCTGCATG...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGAAGGAGACAGCCACTCTaGTTCCCCGAGAGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGRRQPL*FPESPS
Trigger: GGAAGGACTCTCGGGGAACAAGAGTGGCTGTCTCCT...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACAGGAGACAGCCACTCTaGTTCCCCGAGAGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHRRQPL*FPESPS
Trigger: GGAAGGACTCTCGGGGAACAAGAGTGGCTGTCTCCT...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp AGCCTTGAAAAGGGTCATATTGACCCGGGATTAGCGGGTAACCCATGCCAACGTACGCTAGGGCTGGTATaGACTTTCTCTGTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SLEKGHIDPGLAGNPCQRTLGLV*TFSVSS
Trigger: AGAAGAGACAGAGAAAGTCAATACCAGCCCTAGCGT...ACGTTGGCATGGGTTACCCGCTAATCCCGGGTCAATATGACCCTTTTCAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR CAA 90 bp CATGCAAGTACTGTATGTATGACTGATGCTGACTCATGGGTGAGGAGACAGCCAACAGGAGCAGGAGACTaGCTGCGGTATTGGTTAGCA +
Preference number: 5 (lower is better)
Translates to: HASTVCMTDADSWVRRQPTGAGD*LRYWLA
Trigger: TGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGT...TGGCTGTCTCCTCACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS TCA 90 bp CTTCTGGTCCATATAGAGCCCATATGCATACTGGCCATAATAAAGTaGCTGAGCCAGGGCAGGATGTCTTTGTGTGATCACCGACTGGTG +
Preference number: 5 (lower is better)
Translates to: LLVHIEPICILAIIK*LSQGRMSLCDHRLV
Trigger: CACCAGTCGGTGATCACACAAAGACATCCTGCCCTGGCTCAGTCACTTTATTATGGCCAGTATGCATATGGGCTCTATATGGACCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS GCA 90 bp TTTCCTTTCACAGTCTCCTCTCCCAGTCTGGGCCATTTTCTGCTCTaGCAGCCTCTGGTCCTCATAGTACTTCTCATACTGCTGTCTATA +
Preference number: 5 (lower is better)
Translates to: FPFTVSSPSLGHFLL*QPLVLIVLLILLSI
Trigger: TATAGACAGCAGTATGAGAAGTACTATGAGGACCAGAGGCTGGCAGAGCAGAAAATGGCCCAGACTGGGAGAGGAGACTGTGAAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CCA 90 bp GGATGCCGGTGCCTTCAACTGGTCATAAGCAGATACACTTGTGCTTaGCTCACTGCATTCAAGTGCCACATTACTCAATCCTTCCTCACA +
Preference number: 5 (lower is better)
Translates to: GCRCLQLVISRYTCA*LTAFKCHITQSFLT
Trigger: TGTGAGGAAGGATTGAGTAATGTGGCACTTGAATGCAGTGAGCCAAGCACAAGTGTATCTGCTTATGACCAGTTGAAGGCACCGGCATCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CCA 90 bp GGTCCTCATAGTACTTCTCATACTGCTGTCTATAGGCAGGGCTGGTaGCCATCAGAGACTTCTGGTCCATATAGAGCCCATATGCATACT +
Preference number: 5 (lower is better)
Translates to: GPHSTSHTAVYRQGW*PSETSGPYRAHMHT
Trigger: AGTATGCATATGGGCTCTATATGGACCAGAAGTCTCTGATGGCCACCAGCCCTGCCTATAGACAGCAGTATGAGAAGTACTATGAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CCA 90 bp TCTGGTCCTCATAGTACTTCTCATACTGCTGTCTATAGGCAGGGCTaGTGGCCATCAGAGACTTCTGGTCCATATAGAGCCCATATGCAT +
Preference number: 5 (lower is better)
Translates to: SGPHSTSHTAVYRQG*WPSETSGPYRAHMH
Trigger: ATGCATATGGGCTCTATATGGACCAGAAGTCTCTGATGGCCACCAGCCCTGCCTATAGACAGCAGTATGAGAAGTACTATGAGGACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS-3UTR CAA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGTGGACTTCCTGCCTCTaGCCAGTGCTGCTGATCTCG +
Preference number: 5 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWWTSCL*PVLLIS
Trigger: CGAGATCAGCAGCACTGGCAAGAGGCAGGAAGTCCA...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGACTATTGCTGTTTGGGTaGCCGCTGCCGCCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGLLLFG*PLPPLL
Trigger: GAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATAG...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTCCTGGCTTCTCCTCTTaGCTTTTCCCACAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: FLRGLWEICEGYARFRHTPGFSS*LFPQEP
Trigger: AGGCTCCTGTGGGAAAAGCAAAGAGGAGAAGCCAGG...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACCCTCAGCAGCACAATTaGGGGGTGTCCTTCGTCCGC +
Preference number: 5 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNPQQHN*GVSFVR
Trigger: GCGGACGAAGGACACCCCCAAATTGTGCTGCTGAGG...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAGTTTAGAGAGGTTTTaGTCCGTTTTGCAGTTGGTA +
Preference number: 5 (lower is better)
Translates to: WFATWQQTLCVRAWLLIQSLERF*SVLQLV
Trigger: TACCAACTGCAAAACGGACAAAAACCTCTCTAAACT...TTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATTGCCCAGGTAAATCTTaGCTGGCCCCCTTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNCPGKS*LAPLES
Trigger: GGACTCCAAGGGGGCCAGCAAAGATTTACCTGGGCA...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATTTATCGGCCTCAGCTTaGATACTGGCCATGCGGCTC +
Preference number: 5 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHLSASA*ILAMRL
Trigger: GAGCCGCATGGCCAGTATCAAAGCTGAGGCCGATAA...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATCATGCAGAGGTGCCATaGGTGCCTGCCCGTTCACCA +
Preference number: 5 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYHAEVP*VPARSP
Trigger: TGGTGAACGGGCAGGCACCAATGGCACCTCTGCATG...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS GCA 90 bp CTGGTCATAAGCAGATACACTTGTGCTTGGCTCACTGCATTCAAGTaGCACATTACTCAATCCTTCCTCACAGTCCGAGATCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: LVISRYTCAWLTAFK*HITQSFLTVRDLVL
Trigger: GAGGACAAGATCTCGGACTGTGAGGAAGGATTGAGTAATGTGGCACTTGAATGCAGTGAGCCAAGCACAAGTGTATCTGCTTATGACCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS GCA 90 bp GTGCCTTCAACTGGTCATAAGCAGATACACTTGTGCTTGGCTCACTaGATTCAAGTGCCACATTACTCAATCCTTCCTCACAGTCCGAGA +
Preference number: 5 (lower is better)
Translates to: VPSTGHKQIHLCLAH*IQVPHYSILPHSPR
Trigger: TCTCGGACTGTGAGGAAGGATTGAGTAATGTGGCACTTGAATGCAGTGAGCCAAGCACAAGTGTATCTGCTTATGACCAGTTGAAGGCAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS GCA 90 bp GTGATCCTTGTTGGTACAGATTATTTTCATCTGCCTTTTGGTGAATaGGCCACTACTGGATGCAATCCATGTCCTCAAGCGGCCCATTGC +
Preference number: 5 (lower is better)
Translates to: VILVGTDYFHLPFGE*ATTGCNPCPQAAHC
Trigger: GCAATGGGCCGCTTGAGGACATGGATTGCATCCAGTAGTGGCGCATTCACCAAAAGGCAGATGAAAATAATCTGTACCAACAAGGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511308.1
CDS-3UTR CAA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGCCACAATCCTTGGAGTaGCTGCTACTAGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SQLAFLRGLWEICEGYARPQSLE*LLLVVV
Trigger: CACCACCACTAGTAGCAGCAACTCCAAGGATTGTGG...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACCCACAATCCTTGGAGTaGCTGCTACTAGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHPQSLE*LLLVVV
Trigger: CACCACCACTAGTAGCAGCAACTCCAAGGATTGTGG...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCCTGGTGCTGGTACTATaGCTGTTTGGGTTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFLVLVL*LFGLPL
Trigger: CAGCGGCAACCCAAACAGCAATAGTACCAGCACCAG...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCTGGTGCTGGTACTATaGCTGTTTGGGTTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: STNSDYRNILHWCVFNRSLVLVL*LFGLPL
Trigger: CAGCGGCAACCCAAACAGCAATAGTACCAGCACCAG...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GTTAACGATACAGGAAGGCTGGGCACACCACTCTCTTTATTAGGAGTTTTCCTCTTCCTCCACGTGACATaGACCACTAGGACACCTTCT +
Preference number: 5 (lower is better)
Translates to: VNDTGRLGTPLSLLGVFLFLHVT*TTRTPS
Trigger: AGAAGGTGTCCTAGTGGTCAATGTCACGTGGAGGAA...GAGGAAAACTCCTAATAAAGAGAGTGGTGTGCCCAGCCTTCCTGTATCGTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACGAGTGCTTCTGGAATTaGTGCGGACACGCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHECFWN*CGHAFQ
Trigger: CTGGAAAGCGTGTCCGCACAAATTCCAGAAGCACTC...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACGCTCTCTCTTTCCCTTaGGGGTCCCAGGTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNALSFP*GSQVGF
Trigger: GAAACCCACCTGGGACCCCAAAGGGAAAGAGAGAGC...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAGTCAGTTGGTAGCTTTTTaGCCCTTTTCTTTATCTCCT +
Preference number: 5 (lower is better)
Translates to: CDVAADPVCASLVTDTKSQLVAF*PFSLSP
Trigger: AGGAGATAAAGAAAAGGGCAAAAAAGCTACCAACTG...ACTTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAATAGGCCGGGCTGCTaGTCTTTGCAGCTGAACTCT +
Preference number: 5 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHNRPGC*SLQLNS
Trigger: AGAGTTCAGCTGCAAAGACAAGCAGCCCGGCCTATT...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGATGGGGAACTGGCCTTaGATCTCATACCCTCCGACC +
Preference number: 5 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWMGNWP*ISYPPT
Trigger: GGTCGGAGGGTATGAGATCAAAGGCCAGTTCCCCAT...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CATGCAAGTACTGTATGTATGACTGATGCTGACTCATGGGTGAGGAGACAGCCAACGCTAGGGCTGGTATaGACTTTCTCTGTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: HASTVCMTDADSWVRRQPTLGLV*TFSVSS
Trigger: AGAAGAGACAGAGAAAGTCAATACCAGCCCTAGCGT...TGGCTGTCTCCTCACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCTTGCTCTCCGTGGTTGTTTTCGTGTaGACGCTAGGGCTGGTATTG +
Preference number: 5 (lower is better)
Translates to: ESFQFTGVFRSSFFSLLSVVVFV*TLGLVL
Trigger: CAATACCAGCCCTAGCGTCAACACGAAAACAACCAC...GGAGAGCAAGCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTAGACTTGCTGCGGTATaGGTTAGCATGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: FLRGLWEICEGYARFRHTRLAAV*VSMLLE
Trigger: CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCT...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATACAGGAGCAGGAGACTaGCTGCGGTATTGGTTAGCA +
Preference number: 5 (lower is better)
Translates to: GAYGKYVKDMQGSGTLIHTGAGD*LRYWLA
Trigger: TGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGT...ATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTTTGTTATTCTCTTCTTaGTCCAGGAAACATTCCAGA +
Preference number: 5 (lower is better)
Translates to: FPLLSGLRRGSRPCVCEPLLFSS*SRKHSR
Trigger: TCTGGAATGTTTCCTGGACAAAGAAGAGAATAACAA...AGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS TCA 90 bp TGTTGTGATCCTTGTTGGTACAGATTATTTTCATCTGCCTTTTGGTaGATGCGCCACTACTGGATGCAATCCATGTCCTCAAGCGGCCCA +
Preference number: 5 (lower is better)
Translates to: CCDPCWYRLFSSAFW*MRHYWMQSMSSSGP
Trigger: TGGGCCGCTTGAGGACATGGATTGCATCCAGTAGTGGCGCATTCACCAAAAGGCAGATGAAAATAATCTGTACCAACAAGGATCACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511308.1
CDS-3UTR CAA 90 bp GAGTCCTTCCAGTTCACAGGAGTCTTTCGATCATCATTTTTCAGCTTGCTCTCCTCAGTTTTCAGTTTCTaGATTCGCCTGTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: ESFQFTGVFRSSFFSLLSSVFSF*IRLWLS
Trigger: GGAGAGCCACAGGCGAATCAAGAAACTGAAAACTGA...GGAGAGCAAGCTGAAAAATGATGATCGAAAGACTCCTGTGAACTGGAAGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATTCCTCCACGTGACATaGACCACTAGGACACCTTCT +
Preference number: 5 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGFLHVT*TTRTPS
Trigger: AGAAGGTGTCCTAGTGGTCAATGTCACGTGGAGGAA...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATCGCTTTCCAGGCTTATaGTCCTCAGAGCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNRFPGL*SSELEF
Trigger: GAACTCCAGCTCTGAGGACAATAAGCCTGGAAAGCG...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGCAGATACACTTGTGCTaGGCTCACTGCATTCAAGTG +
Preference number: 5 (lower is better)
Translates to: FLISFTEWFATWQQTLCVQIHLC*AHCIQV
Trigger: CACTTGAATGCAGTGAGCCAAGCACAAGTGTATCTG...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTATGGAACCTGGGCCATaGCTCATCAGCTCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: FLRGLWEICEGYARFRHTMEPGP*LISSLF
Trigger: AAAGAGAGAGCTGATGAGCAATGGCCCAGGTTCCAT...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCAACGCAGCCGTCATGTaGGAGATTACTGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: VQTVTTGTFYTGASLTGANAAVM*EITGRL
Trigger: CAACCTTCCAGTAATCTCCAACATGACGGCTGCGTT...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTGCGACGTGGCAGCAGACCCTGTGTGTGCGAGCCTGGTTACTGATACAAAAAAGTTTAGAGAGGTTTTaGTCCGTTTTGCAGTTGGTA +
Preference number: 5 (lower is better)
Translates to: FATWQQTLCVRAWLLIQKSLERF*SVLQLV
Trigger: TACCAACTGCAAAACGGACAAAAACCTCTCTAAACT...TTTTTGTATCAGTAACCAGGCTCGCACACACAGGGTCTGCTGCCACGTCGCAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTCCTCAGACTCCTTCTaGATCTTCATTCCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: SQLAFLRGLWEICEGYARSSDSF*IFIPCV
Trigger: CACGCAGGGAATGAAGATCAAGAAGGAGTCTGAGGA...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTTGTTTAGTTTCCTCCTaGCCCAGCTCTTTCAAGGGG +
Preference number: 5 (lower is better)
Translates to: FLRGLWEICEGYARFRHTCLVSS*PSSFKG
Trigger: CCCCTTGAAAGAGCTGGGCAAGGAGGAAACTAAACA...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp GGTAAGGATAAGCATGCAAGTACTGTATGTATGACTGATGCTGACTCATGGGTGGGATGCTTGGCCTCTTaGGGCTCCTCTTTAATGCTT +
Preference number: 5 (lower is better)
Translates to: GKDKHASTVCMTDADSWVGCLAS*GSSLML
Trigger: AAGCATTAAAGAGGAGCCCAAAGAGGCCAAGCATCC...CACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATGCTTATCCTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGACGCTAGGGCTGGTATaGACTTTCTCTGTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: FLISFTEWFATWQQTLCVTLGLV*TFSVSS
Trigger: AGAAGAGACAGAGAAAGTCAATACCAGCCCTAGCGT...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GGTAAGGATAAGCATGCAAGTACTGTATGTATGACTGATGCTGACTCATGGGTGGTGGTTGTTTTCGTGTaGACGCTAGGGCTGGTATTG +
Preference number: 5 (lower is better)
Translates to: GKDKHASTVCMTDADSWVVVVFV*TLGLVL
Trigger: CAATACCAGCCCTAGCGTCAACACGAAAACAACCAC...CACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATGCTTATCCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCACAGGAGCAGGAGACTaGCTGCGGTATTGGTTAGCA +
Preference number: 5 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFTGAGD*LRYWLA
Trigger: TGCTAACCAATACCGCAGCAAGTCTCCTGCTCCTGT...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGAGCAGAGGTCAAGCCTaGAAAAGGGTCATATTGACC +
Preference number: 5 (lower is better)
Translates to: FLISFTEWFATWQQTLCVSRGQA*KRVILT
Trigger: GGTCAATATGACCCTTTTCAAGGCTTGACCTCTGCT...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACAATGATGCCATGTTCTaGAATCTGGGTCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHNDAMF*NLGPGR
Trigger: CCTCCCAGGACCCAGATTCAAGAACATGGCATCATT...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGCCGATGAACTTTTCTTaGGAGATGAGGGGACATTCG +
Preference number: 5 (lower is better)
Translates to: SQLAFLRGLWEICEGYARPMNFS*EMRGHS
Trigger: CGAATGTCCCCTCATCTCCAAAGAAAAGTTCATCGG...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATGGACCTCCACAATCCTaGGAGTTGCTGCTACTAGTG +
Preference number: 5 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYGPPQS*ELLLLV
Trigger: CACTAGTAGCAGCAACTCCAAGGATTGTGGAGGTCC...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000613878.4
CDS-3UTR CAA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCTCAGTTTTCAGTTTCTaGATTCGCCTGTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: VQTVTTGTFYTGASLTGASVFSF*IRLWLS
Trigger: GGAGAGCCACAGGCGAATCAAGAAACTGAAAACTGA...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGACCGGTGCTGCAATATaGGATGAAGATGGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: SQLAFLRGLWEICEGYARTGAAI*DEDGEK
Trigger: CTTTTCCCCATCTTCATCCAATATTGCAGCACCGGT...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGACCAACTTCACATGTATaGACACCCACAGAACGAGTC +
Preference number: 5 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGPTSHV*TPTERV
Trigger: GACTCGTTCTGTGGGTGTCAATACATGTGAAGTTGG...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCTTCCTCCACGTGACATaGACCACTAGGACACCTTCT +
Preference number: 5 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFFLHVT*TTRTPS
Trigger: AGAAGGTGTCCTAGTGGTCAATGTCACGTGGAGGAA...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCGTTCCCACGTACGTTTaGTTCCTCCACGTGACATTG +
Preference number: 5 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFVPTYV*FLHVTL
Trigger: CAATGTCACGTGGAGGAACAAAACGTACGTGGGAAC...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCGAGTGCTTCTGGAATTaGTGCGGACACGCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: TNTFLISFTEWFATWQQTECFWN*CGHAFQ
Trigger: CTGGAAAGCGTGTCCGCACAAATTCCAGAAGCACTC...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGAAGTCTCTGGTTTCCCTaGAGGGGTAGTGGGAGTGCT +
Preference number: 5 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGSLWFP*RGSGSA
Trigger: AGCACTCCCACTACCCCTCAAGGGAAACCAGAGACT...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGATCACAGTCCGAGATCTaGTCCTCACTGTCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGSQSEI*SSLSGS
Trigger: CGAGCCTGACAGTGAGGACAAGATCTCGGACTGTGA...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGATGGAACCTGGGCCATaGCTCATCAGCTCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWMEPGP*LISSLF
Trigger: AAAGAGAGAGCTGATGAGCAATGGCCCAGGTTCCAT...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGTTAAGGCCCTTCTTTTaGCCAGAATTCTTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: FLISFTEWFATWQQTLCVLRPFF*PEFFPA
Trigger: AGCTGGGAAGAATTCTGGCAAAAAGAAGGGCCTTAA...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTTCTAGTTTCCCCAGCTaGGCATCCATTTTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: FLRGLWEICEGYARFRHTSSFPS*ASIFGL
Trigger: AAGCCCAAAAATGGATGCCAAGCTGGGGAAACTAGA...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCACTCCGACAGTCCATTaGCCAGCCCTTCATTCTTGT +
Preference number: 5 (lower is better)
Translates to: STNSDYRNILHWCVFNRSTPTVH*PALHSC
Trigger: ACAAGAATGAAGGGCTGGCAAATGGACTGTCGGAGT...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACAATAGGCCGGGCTGCTaGTCTTTGCAGCTGAACTCT +
Preference number: 5 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNNRPGC*SLQLNS
Trigger: AGAGTTCAGCTGCAAAGACAAGCAGCCCGGCCTATT...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGAATGGGGAACTGGCCTTaGATCTCATACCCTCCGACC +
Preference number: 5 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGMGNWP*ISYPPT
Trigger: GGTCGGAGGGTATGAGATCAAAGGCCAGTTCCCCAT...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGACAGGGCAGGATGTCTTaGTGTGATCACCGACTGGTG +
Preference number: 5 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGQGRMS*CDHRLV
Trigger: CACCAGTCGGTGATCACACAAAGACATCCTGCCCTG...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp AGTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCTGTTTAGTTTCCTCCTaGCCCAGCTCTTTCAAGGGG +
Preference number: 5 (lower is better)
Translates to: STNSDYRNILHWCVFNRSCLVSS*PSSFKG
Trigger: CCCCTTGAAAGAGCTGGGCAAGGAGGAAACTAAACA...GCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCGGATGCTTGGCCTCTTaGGGCTCCTCTTTAATGCTT +
Preference number: 5 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFGCLAS*GSSLML
Trigger: AAGCATTAAAGAGGAGCCCAAAGAGGCCAAGCATCC...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCGCTTGCTCTCCTCCATaGATTGAGAATCAGGATGCT +
Preference number: 5 (lower is better)
Translates to: VQTVTTGTFYTGASLTGAACSPP*IENQDA
Trigger: AGCATCCTGATTCTCAATCAATGGAGGAGAGCAAGC...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GCTTTAGATTCAGTGGTTGTTTTCGTGTTGACGCTAGGGCTGGTATTGACTTTCGCTTGCTCTCCTCCATaGATTGAGAATCAGGATGCT +
Preference number: 5 (lower is better)
Translates to: ALDSVVVFVLTLGLVLTFACSPP*IENQDA
Trigger: AGCATCCTGATTCTCAATCAATGGAGGAGAGCAAGC...GAAAGTCAATACCAGCCCTAGCGTCAACACGAAAACAACCACTGAATCTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACAGACTTGCTGCGGTATaGGTTAGCATGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNRLAAV*VSMLLE
Trigger: CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCT...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCCTTTACTGAGTGGTTaGCGACGTGGCAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFPLLSG*RRGSRP
Trigger: GGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGG...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATAATGATGCCATGTTCTaGAATCTGGGTCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNNDAMF*NLGPGR
Trigger: CCTCCCAGGACCCAGATTCAAGAACATGGCATCATT...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS GCA 90 bp GAATCTGGGTCTTGTTTAAATCTCGAGGTTGGGTCTACACCTGTCTaGTTCATAGAGTCCATGACAGACTTCATTTCTACAGCCTCCTTA +
Preference number: 5 (lower is better)
Translates to: ESGSCLNLEVGSTPV*FIESMTDFISTASL
Trigger: TAAGGAGGCTGTAGAAATGAAGTCTGTCATGGACTCTATGAAGCAGACAGGTGTAGACCCAACCTCGAGATTTAAACAAGACCCAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CCA 90 bp TATTGGGGAATCAGTAAAGGGGACAGGGAAGGATGGAGAGTAAGGTaGCTCATGTATTGTCCTCACAGTCCAATATCAGGTTTAAAGGAA +
Preference number: 5 (lower is better)
Translates to: YWGISKGDREGWRVR*LMYCPHSPISGLKE
Trigger: TTCCTTTAAACCTGATATTGGACTGTGAGGACAATACATGAGCCACCTTACTCTCCATCCTTCCCTGTCCCCTTTACTGATTCCCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306315.9
CDS-3UTR CAA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCGATTTGCTGGTCTCTTaGTGTGAATTCCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: TNTFLISFTEWFATWQQTDLLVS*CEFPWG
Trigger: TCCCCAGGGGAATTCACACAAAGAGACCAGCAAATC...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACGATTTGCTGGTCTCTTaGTGTGAATTCCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNDLLVS*CEFPWG
Trigger: TCCCCAGGGGAATTCACACAAAGAGACCAGCAAATC...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGACCGGTGCTGCAATATaGGATGAAGATGGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWTGAAI*DEDGEK
Trigger: CTTTTCCCCATCTTCATCCAATATTGCAGCACCGGT...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCGTTCCCACGTACGTTTaGTTCCTCCACGTGACATTG +
Preference number: 5 (lower is better)
Translates to: TNTFLISFTEWFATWQQTVPTYV*FLHVTL
Trigger: CAATGTCACGTGGAGGAACAAAACGTACGTGGGAAC...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATGTTCCCACGTACGTTTaGTTCCTCCACGTGACATTG +
Preference number: 5 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYVPTYV*FLHVTL
Trigger: CAATGTCACGTGGAGGAACAAAACGTACGTGGGAAC...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATCAGATACACTTGTGCTaGGCTCACTGCATTCAAGTG +
Preference number: 5 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNQIHLC*AHCIQV
Trigger: CACTTGAATGCAGTGAGCCAAGCACAAGTGTATCTG...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTTTAAGGCCCTTCTTTTaGCCAGAATTCTTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: FLRGLWEICEGYARFRHTLRPFF*PEFFPA
Trigger: AGCTGGGAAGAATTCTGGCAAAAAGAAGGGCCTTAA...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATAACGCAGCCGTCATGTaGGAGATTACTGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYNAAVM*EITGRL
Trigger: CAACCTTCCAGTAATCTCCAACATGACGGCTGCGTT...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATGTGGTTGTTTTCGTGTaGACGCTAGGGCTGGTATTG +
Preference number: 5 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYVVVFV*TLGLVL
Trigger: CAATACCAGCCCTAGCGTCAACACGAAAACAACCAC...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAGCAGAGGTCAAGCCTaGAAAAGGGTCATATTGACC +
Preference number: 5 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFSRGQA*KRVILT
Trigger: GGTCAATATGACCCTTTTCAAGGCTTGACCTCTGCT...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATCTGGTACGCAGGCTATaGGGTTATTTGCCATTCAAG +
Preference number: 5 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNLVRRL*GYLPFK
Trigger: CTTGAATGGCAAATAACCCAATAGCCTGCGTACCAG...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGAGGCTCGAACTCCAGCTaGTTTTCTGGGTCTAAGTGT +
Preference number: 5 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGGSNSS*FSGSKC
Trigger: ACACTTAGACCCAGAAAACAAGCTGGAGTTCGAGCC...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGCATAAGCAGATACACTaGTGCTTGGCTCACTGCATT +
Preference number: 5 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWHKQIH*CLAHCI
Trigger: AATGCAGTGAGCCAAGCACAAGTGTATCTGCTTATG...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTTTTCTTTTTGTCTTaGAGTGACACCAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: SQLAFLRGLWEICEGYARFFFLS*SDTRAG
Trigger: CCCAGCTCTGGTGTCACTCAAAGACAAAAAGAAAAA...CCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTCTGAGGGGCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTTTTTTCTTTTTGTCTTaGAGTGACACCAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: FLRGLWEICEGYARFRHTFFFLS*SDTRAG
Trigger: CCCAGCTCTGGTGTCACTCAAAGACAAAAAGAAAAA...AGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGCCCCTCAGAAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTGCTTGGCATCCATTTTaGGGCTTCCCGTCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFAWHPF*GFPSLS
Trigger: GGAAAGAGACGGGAAGCCCAAAAATGGATGCCAAGC...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCTCTAGTTTCCCCAGCTaGGCATCCATTTTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: TNTFLISFTEWFATWQQTSSFPS*ASIFGL
Trigger: AAGCCCAAAAATGGATGCCAAGCTGGGGAAACTAGA...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGTGTGTGTGTAAGGATGCAGAATaGTGGTCCACTTTCTTAGAA +
Preference number: 5 (lower is better)
Translates to: FLISFTEWFATWQQTLCVCKDAE*WSTFLE
Trigger: TTCTAAGAAAGTGGACCACAATTCTGCATCCTTACA...CACACACAGGGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp TTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATAGGGAGCTTTTGAGATaGTGGCCGATGGCATATTTT +
Preference number: 5 (lower is better)
Translates to: LYQSVIITVSLSEGLMGNRELLR*WPMAYF
Trigger: AAAATATGCCATCGGCCACAATCTCAAAAGCTCCCT...ATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGAGGGAGCTTTTGAGATaGTGGCCGATGGCATATTTT +
Preference number: 5 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWRELLR*WPMAYF
Trigger: AAAATATGCCATCGGCCACAATCTCAAAAGCTCCCT...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACAGTTTAGAATGGTTTTaGTTAGGCTCCGGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHSLEWF*LGSGVE
Trigger: CTCTACTCCGGAGCCTAACAAAAACCATTCTAAACT...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTAGACTTGCTGCGGTATaGGTTAGCATGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFRLAAV*VSMLLE
Trigger: CTCCAGCAGCATGCTAACCAATACCGCAGCAAGTCT...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCTGGTACGCAGGCTATaGGGTTATTTGCCATTCAAG +
Preference number: 5 (lower is better)
Translates to: TNTFLISFTEWFATWQQTLVRRL*GYLPFK
Trigger: CTTGAATGGCAAATAACCCAATAGCCTGCGTACCAG...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCAAGATTATCTGGTACGCAGGCTATaGGGTTATTTGCCATTCAAG +
Preference number: 5 (lower is better)
Translates to: ITDVSGTQAIGLFAIQDYLVRRL*GYLPFK
Trigger: CTTGAATGGCAAATAACCCAATAGCCTGCGTACCAG...ATAATCTTGAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCAAGGTGGCTCATGTATaGTCCTCACAGTCCAATATC +
Preference number: 5 (lower is better)
Translates to: TNTFLISFTEWFATWQQTKVAHV*SSQSNI
Trigger: GATATTGGACTGTGAGGACAATACATGAGCCACCTT...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306315.9
CDS-3UTR CAA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTTTCCTCCACGTGACATaGACCACTAGGACACCTTCT +
Preference number: 5 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFFLHVT*TTRTPS
Trigger: AGAAGGTGTCCTAGTGGTCAATGTCACGTGGAGGAA...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GCTTATGGGAAATATGTGAAGGATATGCAAGGTTCAGGCACACTGATACATAACCATAAGCAGATACACTaGTGCTTGGCTCACTGCATT +
Preference number: 5 (lower is better)
Translates to: AYGKYVKDMQGSGTLIHNHKQIH*CLAHCI
Trigger: AATGCAGTGAGCCAAGCACAAGTGTATCTGCTTATG...GTTATGTATCAGTGTGCCTGAACCTTGCATATCCTTCACATATTTCCCATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp GTACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCGAGATTACTGGAAGGTaGTTCAGTTCATTGTTAAGG +
Preference number: 5 (lower is better)
Translates to: VQTVTTGTFYTGASLTGAEITGR*FSSLLR
Trigger: CCTTAACAATGAACTGAACAACCTTCCAGTAATCTC...GGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGACAGTTGGTAGCTTTTTaGCCCTTTTCTTTATCTCCT +
Preference number: 5 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGQLVAF*PFSLSP
Trigger: AGGAGATAAAGAAAAGGGCAAAAAAGCTACCAACTG...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGAACGCTAGGGCTGGTATaGACTTTCTCTGTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGTLGLV*TFSVSS
Trigger: AGAAGAGACAGAGAAAGTCAATACCAGCCCTAGCGT...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp CTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGTATACAACACAGTTTTaGTGGTACTGGCAACCCCAT +
Preference number: 5 (lower is better)
Translates to: LNCTKVSSSQLAFLRGLWYTTQF*WYWQPH
Trigger: ATGGGGTTGCCAGTACCACAAAAACTGTGTTGTATA...CCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GTGTCATCATCACAGTTAGCCTTTCTGAGGGGCTTATGGGAAATATGTGAAGGAAAAGTCGAATATTTCTaGTCTGGGTGTTACCAGAAT +
Preference number: 5 (lower is better)
Translates to: VSSSQLAFLRGLWEICEGKVEYF*SGCYQN
Trigger: ATTCTGGTAACACCCAGACAAGAAATATTCGACTTT...TCCTTCACATATTTCCCATAAGCCCCTCAGAAAGGCTAACTGTGATGATGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306315.9
CDS-3UTR CAA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTCCAACTTCACATGTATaGACACCCACAGAACGAGTC +
Preference number: 5 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFPTSHV*TPTERV
Trigger: GACTCGTTCTGTGGGTGTCAATACATGTGAAGTTGG...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ATAGAACAATCACAGATGTCTCTGGTACGCAGGCTATTGGGTTATTTGCCATTCCAGGGTGCATGTAACTaGGAGAATAATAAGGATCAT +
Preference number: 5 (lower is better)
Translates to: IEQSQMSLVRRLLGYLPFQGACN*ENNKDH
Trigger: ATGATCCTTATTATTCTCCAAGTTACATGCACCCTG...GAATGGCAAATAACCCAATAGCCTGCGTACCAGAGACATCTGTGATTGTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp ACAAACAGTGACTACAGGAACATTTTACACTGGTGCGTCTTTAACAGGAGCCACTTGTTATTCTCTTCTTaGTCCAGGAAACATTCCAGA +
Preference number: 5 (lower is better)
Translates to: TNSDYRNILHWCVFNRSHLLFSS*SRKHSR
Trigger: TCTGGAATGTTTCCTGGACAAAGAAGAGAATAACAA...GTGGCTCCTGTTAAAGACGCACCAGTGTAAAATGTTCCTGTAGTCACTGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS-3UTR CAA 90 bp GGTAAGGATAAGCATGCAAGTACTGTATGTATGACTGATGCTGACTCATGGGTGTTGTTATTCTCTTCTTaGTCCAGGAAACATTCCAGA +
Preference number: 5 (lower is better)
Translates to: GKDKHASTVCMTDADSWVLLFSS*SRKHSR
Trigger: TCTGGAATGTTTCCTGGACAAAGAAGAGAATAACAA...CACCCATGAGTCAGCATCAGTCATACATACAGTACTTGCATGCTTATCCTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613878.4
CDS-3UTR CAA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCTATACAACACAGTTTTaGTGGTACTGGCAACCCCAT +
Preference number: 5 (lower is better)
Translates to: TNTFLISFTEWFATWQQTYTTQF*WYWQPH
Trigger: ATGGGGTTGCCAGTACCACAAAAACTGTGTTGTATA...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS CCA 90 bp TCTTCTCTCTATCAAGTTCTTCTGACTTTTGCTGATCCAGATATTTaGGCTGGTATACATAATGATGCCATGTTCTTGAATCTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: SSLYQVLLTFADPDI*AGIHNDAMFLNLGP
Trigger: AGGACCCAGATTCAAGAACATGGCATCATTATGTATACCAGCCCAAATATCTGGATCAGCAAAAGTCAGAAGAACTTGATAGAGAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS-3UTR CAA 90 bp ACAAATACATTTTTAATTTCCTTTACTGAGTGGTTTGCGACGTGGCAGCAGACCCAGGGTGCATGTAACTaGGAGAATAATAAGGATCAT +
Preference number: 5 (lower is better)
Translates to: TNTFLISFTEWFATWQQTQGACN*ENNKDH
Trigger: ATGATCCTTATTATTCTCCAAGTTACATGCACCCTG...GGTCTGCTGCCACGTCGCAAACCACTCAGTAAAGGAAATTAAAAATGTATTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGATATACAACACAGTTTTaGTGGTACTGGCAACCCCAT +
Preference number: 5 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGYTTQF*WYWQPH
Trigger: ATGGGGTTGCCAGTACCACAAAAACTGTGTTGTATA...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000613878.4
CDS CCA 90 bp TCTTCTCTCTATCAAGTTCTTCTGACTTTTGCTGATCCAGATATTTaGGCTGGTATACATAATGATGCCATGTTCTTGAATCTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: SSLYQVLLTFADPDI*AGIHNDAMFLNLGL
Trigger: AAGACCCAGATTCAAGAACATGGCATCATTATGTATACCAGCCCAAATATCTGGATCAGCAAAAGTCAGAAGAACTTGATAGAGAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS-3UTR CAA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGAGAGATTACTGGAAGGTaGTTCAGTTCATTGTTAAGG +
Preference number: 5 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGEITGR*FSSLLR
Trigger: CCTTAACAATGAACTGAACAACCTTCCAGTAATCTC...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CATAAAACAAGTAACCAGGCAATGGCGTTAAAGTCTCTCTCTTCTAAAACTGGATGTAAGGATGCAGAATaGTGGTCCACTTTCTTAGAA +
Preference number: 5 (lower is better)
Translates to: HKTSNQAMALKSLSSKTGCKDAE*WSTFLE
Trigger: TTCTAAGAAAGTGGACCACAATTCTGCATCCTTACA...TCCAGTTTTAGAAGAGAGAGACTTTAACGCCATTGCCTGGTTACTTGTTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTAGTTTAGAATGGTTTTaGTTAGGCTCCGGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFSLEWF*LGSGVE
Trigger: CTCTACTCCGGAGCCTAACAAAAACCATTCTAAACT...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306315.9
ENST00000504926.5
CDS-3UTR CAA 90 bp CCACCAAATAGACATCTAAATTGTACCAAAGTGTCATCATCACAGTTAGCCTTTAAGTATCAACTGTATTaGGATCCACACCTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: PPNRHLNCTKVSSSQLAFKYQLY*DPHLFL
Trigger: CAGGAAAAGGTGTGGATCCAAATACAGTTGATACTT...AAAGGCTAACTGTGATGATGACACTTTGGTACAATTTAGATGTCTATTTGGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000613878.4
CDS CCA 72 bp AGCCTGCCCCCGCGGTGGCGGCAGAGGTGCTGGTGCTaGTACTATTGCTGTTTGGGTTGCCGCTGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: SLPPRWRQRCWC*YYCCLGCRCRR
Trigger: GCGGCGGCAGCGGCAACCCAAACAGCAATAGTACCAGCACCAGCACCTCTGCCGCCACCGCGGGGGCAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS GCA 72 bp AGGAGCCTGCCCCCGCGGTGGCGGCAGAGGTGCTGGTaGTGGTACTATTGCTGTTTGGGTTGCCGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: RSLPPRWRQRCW*WYYCCLGCRCR
Trigger: GCGGCAGCGGCAACCCAAACAGCAATAGTACCAGCACCAGCACCTCTGCCGCCACCGCGGGGGCAGGCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS CAA 90 bp CCCCCGCGGTGGCGGCAGAGGTGCTGGTGCTGGTACTATTGCTGTTaGGGTTGCCGCTGCCGCCGCTGCTCACACTTTGACCCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: PPRWRQRCWCWYYCC*GCRCRRCSHFDPAL
Trigger: CAGCGCTGGGTCAAAGTGTGAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATAGTACCAGCACCAGCACCTCTGCCGCCACCGCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS CCA 72 bp CACAGGAGCCTGCCCCCGCGGTGGCGGCAGAGGTGCTaGTGCTGGTACTATTGCTGTTTGGGTTGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: HRSLPPRWRQRC*CWYYCCLGCRC
Trigger: GCAGCGGCAACCCAAACAGCAATAGTACCAGCACCAGCACCTCTGCCGCCACCGCGGGGGCAGGCTCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS CAA 72 bp CCCGCGGTGGCGGCAGAGGTGCTGGTGCTGGTACTATaGCTGTTTGGGTTGCCGCTGCCGCCGCTGCTCACA +
Preference number: 6 (lower is better)
Translates to: PAVAAEVLVLVL*LFGLPLPPLLT
Trigger: TGTGAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATAGTACCAGCACCAGCACCTCTGCCGCCACCGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS TCA 72 bp GCCGCTGCCGCCGCTGCTCACACTTTGACCCAGCGCTaGATTCATGCCAGTTGCCTCTCCAGGGCGCCCTTG +
Preference number: 6 (lower is better)
Translates to: AAAAAAHTLTQR*IHASCLSRAPL
Trigger: CAAGGGCGCCCTGGAGAGGCAACTGGCATGAATTCAGCGCTGGGTCAAAGTGTGAGCAGCGGCGGCAGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS CAA 72 bp GCAGCACAATTTGGGGGTGTCCTTCGTCCGCTGGCATaGAGGCTGCCCCGCCTCCCTTTCCCATTGGCCCCC +
Preference number: 6 (lower is better)
Translates to: AAQFGGVLRPLA*RLPRLPFPLAP
Trigger: GGGGGCCAATGGGAAAGGGAGGCGGGGCAGCCTCAATGCCAGCGGACGAAGGACACCCCCAAATTGTGCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS GCA 72 bp GAGGTGCCATTGGTGCCTGCCCGTTCACCAAAGTGCTaGATTCCAGCCTCGAGGCGCTCCCTATGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: EVPLVPARSPKC*IPASRRSLWKG
Trigger: GCCCTTCCATAGGGAGCGCCTCGAGGCTGGAATGCAGCACTTTGGTGAACGGGCAGGCACCAATGGCACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS GCA 72 bp ATGCCAGTTGCCTCTCCAGGGCGCCCTTGGACTTCCTaGCTCTTGCCAGTGCTGCTGATCTCGGGAATCCCA +
Preference number: 6 (lower is better)
Translates to: MPVASPGRPWTS*LLPVLLISGIP
Trigger: TGGGATTCCCGAGATCAGCAGCACTGGCAAGAGGCAGGAAGTCCAAGGGCGCCCTGGAGAGGCAACTGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS GCA 72 bp CGCCGCTGCTCACACTTTGACCCAGCGCTGAATTCATaGCAGTTGCCTCTCCAGGGCGCCCTTGGACTTCCT +
Preference number: 6 (lower is better)
Translates to: RRCSHFDPALNS*QLPLQGALGLP
Trigger: AGGAAGTCCAAGGGCGCCCTGGAGAGGCAACTGGCATGAATTCAGCGCTGGGTCAAAGTGTGAGCAGCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS GCA 72 bp GCAGAGGTGCCATTGGTGCCTGCCCGTTCACCAAAGTaGTGCATTCCAGCCTCGAGGCGCTCCCTATGGAAG +
Preference number: 6 (lower is better)
Translates to: AEVPLVPARSPK*CIPASRRSLWK
Trigger: CTTCCATAGGGAGCGCCTCGAGGCTGGAATGCAGCACTTTGGTGAACGGGCAGGCACCAATGGCACCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CCA 72 bp TCTGGTGGCCCTGAAGCAGGTCGTGCTTGTCCTTCCTaGATTTCCCCGCATCCTTATCCCGCTTGGCGCCTC +
Preference number: 6 (lower is better)
Translates to: SGGPEAGRACPS*ISPHPYPAWRL
Trigger: GAGGCGCCAAGCGGGATAAGGATGCGGGGAAATCCAGGAAGGACAAGCACGACCTGCTTCAGGGCCACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS CCA 72 bp AGGCGTGAGACTGCTGGAAATCGGCGGTGGTGGCGCTaGCACTGTAAACAGGGGGTCAACCTGGCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: RRETAGNRRWWR*HCKQGVNLASP
Trigger: AGGAGAAGCCAGGTTGACCCCCTGTTTACAGTGCCAGCGCCACCACCGCCGATTTCCAGCAGTCTCACGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504926.5
CDS TCA 72 bp CTGTTTGGGTTGCCGCTGCCGCCGCTGCTCACACTTTaGCCCAGCGCTGAATTCATGCCAGTTGCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: LFGLPLPPLLTL*PSAEFMPVASP
Trigger: TGGAGAGGCAACTGGCATGAATTCAGCGCTGGGTCAAAGTGTGAGCAGCGGCGGCAGCGGCAACCCAAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS GCA 72 bp GTCGGTGACTCACAAAACCTGGGAGGGGCCCAGTCGTaGTTGGTGCAGTCCAGTAGGGTTCCCACGTACGTT +
Preference number: 6 (lower is better)
Translates to: VGDSQNLGGAQS*LVQSSRVPTYV
Trigger: AACGTACGTGGGAACCCTACTGGACTGCACCAAGCACGACTGGGCCCCTCCCAGGTTTTGTGAGTCACCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS GCA 72 bp GAATCTGGGTCCTGGGAGGGGCCCAGTCGTGCTTGGTaGAGTCCAGTAGGGTTCCCACGTACGTTTTGTTCC +
Preference number: 6 (lower is better)
Translates to: ESGSWEGPSRAW*SPVGFPRTFCS
Trigger: GGAACAAAACGTACGTGGGAACCCTACTGGACTGCACCAAGCACGACTGGGCCCCTCCCAGGACCCAGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS CCA 72 bp AATCTGAGGCGTGAGACTGCTGGAAATCGGCGGTGGTaGCGCTGGCACTGTAAACAGGGGGTCAACCTGGCT +
Preference number: 6 (lower is better)
Translates to: NLRRETAGNRRW*RWHCKQGVNLA
Trigger: AGCCAGGTTGACCCCCTGTTTACAGTGCCAGCGCCACCACCGCCGATTTCCAGCAGTCTCACGCCTCAGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504926.5
CDS CAA 90 bp TTTACCAACATAGAGTTTCCCATGAGCCCTGAATCCGGGGCACTTTaGCTAACTTCCCCTGCAGCGGCGACGCTGCCACTCCCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: FTNIEFPMSPESGAL*LTSPAAATLPLPVP
Trigger: GGGCACTGGGAGTGGCAGCGTCGCCGCTGCAGGGGAAGTTAGCAAAAGTGCCCCGGATTCAGGGCTCATGGGAAACTCTATGTTGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306315.9
ENST00000503896.6
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS CAA 90 bp CTGAACTCTCTGCCCCATTCTGGGTCAACACATGCAGAGGTGCCATaGGTGCCTGCCCGTTCACCAAAGTGCTGCATTCCAGCCTCGAGG +
Preference number: 6 (lower is better)
Translates to: LNSLPHSGSTHAEVP*VPARSPKCCIPASR
Trigger: CCTCGAGGCTGGAATGCAGCACTTTGGTGAACGGGCAGGCACCAATGGCACCTCTGCATGTGTTGACCCAGAATGGGGCAGAGAGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS GCA 72 bp TGCTGGTGCTGGTACTATTGCTGTTTGGGTTGCCGCTaGCGCCGCTGCTCACACTTTGACCCAGCGCTGAAT +
Preference number: 6 (lower is better)
Translates to: CWCWYYCCLGCR*RRCSHFDPALN
Trigger: ATTCAGCGCTGGGTCAAAGTGTGAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATAGTACCAGCACCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS CCA 72 bp TGTCCTTCCTGGATTTCCCCGCATCCTTATCCCGCTTaGCGCCTCGGCTGCTCTGGCTTTTACCTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: CPSWISPHPYPA*RLGCSGFYLAS
Trigger: AGAAGCCAGGTAAAAGCCAGAGCAGCCGAGGCGCCAAGCGGGATAAGGATGCGGGGAAATCCAGGAAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS CCA 72 bp AATCTGAGGCGTGAGACTGCTGGAAATCGGCGGTGGTaGCGCTGGCACTGTAAACAGGGGGTCAACCTTCTC +
Preference number: 6 (lower is better)
Translates to: NLRRETAGNRRW*RWHCKQGVNLL
Trigger: GAGAAGGTTGACCCCCTGTTTACAGTGCCAGCGCCACCACCGCCGATTTCCAGCAGTCTCACGCCTCAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306315.9
ENST00000503896.6
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS CCA 72 bp CTTGAATCTGGGTCCTGGGAGGGGCCCAGTCGTGCTTaGTGCAGTCCAGTAGGGTTCCCACGTACGTTTTGT +
Preference number: 6 (lower is better)
Translates to: LESGSWEGPSRA*CSPVGFPRTFC
Trigger: ACAAAACGTACGTGGGAACCCTACTGGACTGCACCAAGCACGACTGGGCCCCTCCCAGGACCCAGATTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS CAA 72 bp GCACCAGCCCCACTGGAGGCCGGACCTCCACAATCCTaGGAGTTGCTGCTACTAGTGGTGGTGGTGGAATTA +
Preference number: 6 (lower is better)
Translates to: APAPLEAGPPQS*ELLLLVVVVEL
Trigger: TAATTCCACCACCACCACTAGTAGCAGCAACTCCAAGGATTGTGGAGGTCCGGCCTCCAGTGGGGCTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000512940.1
ENST00000513986.2
ENST00000613878.4
CDS CAA 72 bp TTGTCCTTCCTGGATTTCCCCGCATCCTTATCCCGCTaGGCGCCTCGGCTGCTCTGGCTTTTACCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: LSFLDFPASLSR*APRLLWLLPGF
Trigger: GAAGCCAGGTAAAAGCCAGAGCAGCCGAGGCGCCAAGCGGGATAAGGATGCGGGGAAATCCAGGAAGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS CAA 72 bp ATAGAGTTTCCCATGAGCCCTGAATCCGGGGCACTTTaGCTAACTTCCCCTGCAGCGGCGACGCTGCCACTC +
Preference number: 6 (lower is better)
Translates to: IEFPMSPESGAL*LTSPAAATLPL
Trigger: GAGTGGCAGCGTCGCCGCTGCAGGGGAAGTTAGCAAAAGTGCCCCGGATTCAGGGCTCATGGGAAACTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306315.9
ENST00000503896.6
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS CAA 72 bp AACCTGGGCCATTGCTCATCAGCTCTCTCTTTCCCTTaGGGGTCCCAGGTGGGTTTCCAGCACCAGGGGATG +
Preference number: 6 (lower is better)
Translates to: NLGHCSSALSFP*GSQVGFQHQGM
Trigger: CATCCCCTGGTGCTGGAAACCCACCTGGGACCCCAAAGGGAAAGAGAGAGCTGATGAGCAATGGCCCAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CAA 90 bp GCTGCGGTAGCACCAGCCCCACTGGAGGCCGGACCTCCACAATCCTaGGAGTTGCTGCTACTAGTGGTGGTGGTGGAATTATTCATCTCA +
Preference number: 6 (lower is better)
Translates to: AAVAPAPLEAGPPQS*ELLLLVVVVELFIS
Trigger: TGAGATGAATAATTCCACCACCACCACTAGTAGCAGCAACTCCAAGGATTGTGGAGGTCCGGCCTCCAGTGGGGCTGGTGCTACCGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000512940.1
ENST00000513986.2
ENST00000613878.4
CDS GCA 72 bp TGGTACTATTGCTGTTTGGGTTGCCGCTGCCGCCGCTaGTCACACTTTGACCCAGCGCTGAATTCATGCCAG +
Preference number: 6 (lower is better)
Translates to: WYYCCLGCRCRR*SHFDPALNSCQ
Trigger: CTGGCATGAATTCAGCGCTGGGTCAAAGTGTGAGCAGCGGCGGCAGCGGCAACCCAAACAGCAATAGTACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS GCA 72 bp GGTCCCAGGTGGGTTTCCAGCACCAGGGGATGCCGGTaGCTTCAACTGGTCATAAGCAGATACACTTGTGCT +
Preference number: 6 (lower is better)
Translates to: GPRWVSSTRGCR*LQLVISRYTCA
Trigger: AGCACAAGTGTATCTGCTTATGACCAGTTGAAGGCACCGGCATCCCCTGGTGCTGGAAACCCACCTGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS GCA 72 bp TTCTGGGTCAACACATGCAGAGGTGCCATTGGTGCCTaGCCGTTCACCAAAGTGCTGCATTCCAGCCTCGAG +
Preference number: 6 (lower is better)
Translates to: FWVNTCRGAIGA*PFTKVLHSSLE
Trigger: CTCGAGGCTGGAATGCAGCACTTTGGTGAACGGGCAGGCACCAATGGCACCTCTGCATGTGTTGACCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS GCA 72 bp CCCATTCTGGGTCAACACATGCAGAGGTGCCATTGGTaGCTGCCCGTTCACCAAAGTGCTGCATTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: PILGQHMQRCHW*LPVHQSAAFQP
Trigger: AGGCTGGAATGCAGCACTTTGGTGAACGGGCAGGCACCAATGGCACCTCTGCATGTGTTGACCCAGAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CCA 72 bp AGGCGTGAGACTGCTGGAAATCGGCGGTGGTGGCGCTaGCACTGTAAACAGGGGGTCAACCTTCTCAGTTTT +
Preference number: 6 (lower is better)
Translates to: RRETAGNRRWWR*HCKQGVNLLSF
Trigger: AAAACTGAGAAGGTTGACCCCCTGTTTACAGTGCCAGCGCCACCACCGCCGATTTCCAGCAGTCTCACGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306315.9
ENST00000503896.6
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS GCA 72 bp ATTTCCCCGCATCCTTATCCCGCTTGGCGCCTCGGCTaGTCTGGCTTTTACCTGGCTTCTCCTCTTTGCTTT +
Preference number: 6 (lower is better)
Translates to: ISPHPYPAWRLG*SGFYLASPLCF
Trigger: AAAGCAAAGAGGAGAAGCCAGGTAAAAGCCAGAGCAGCCGAGGCGCCAAGCGGGATAAGGATGCGGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS GCA 72 bp GCATCTTCCTCAGACTCCTTCTTGATCTTCATTCCCTaGGTGCTCCCACTATTTCCAGCTGCAGGGGCACCG +
Preference number: 6 (lower is better)
Translates to: ASSSDSFLIFIP*VLPLFPAAGAP
Trigger: CGGTGCCCCTGCAGCTGGAAATAGTGGGAGCACGCAGGGAATGAAGATCAAGAAGGAGTCTGAGGAAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS GCA 72 bp ATGGGGAACTGGCCTTTGATCTCATACCCTCCGACCTaGTGTCAGAACCACCATCGTCAGCAGCATCAGATA +
Preference number: 6 (lower is better)
Translates to: MGNWPLISYPPT*CQNHHRQQHQI
Trigger: TATCTGATGCTGCTGACGATGGTGGTTCTGACAGCAGGTCGGAGGGTATGAGATCAAAGGCCAGTTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CAA 90 bp GGCCCAAGACACTCTGGCTCTGTCACTACTCCAACTTCACATGTATaGACACCCACAGAACGAGTCCGAACCAAAAGCTGTTCAACCGGT +
Preference number: 6 (lower is better)
Translates to: GPRHSGSVTTPTSHV*TPTERVRTKSCSTG
Trigger: ACCGGTTGAACAGCTTTTGGTTCGGACTCGTTCTGTGGGTGTCAATACATGTGAAGTTGGAGTAGTGACAGAGCCAGAGTGTCTTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306315.9
ENST00000503896.6
ENST00000504926.5
ENST00000505686.5
ENST00000509799.5
ENST00000511308.1
ENST00000513986.2
ENST00000613878.4
CDS CAA 90 bp CCAGAATTCTTCCCAGCTTTAGCACCAATAATGGAACCTGGGCCATaGCTCATCAGCTCTCTCTTTCCCTTTGGGGTCCCAGGTGGGTTT +
Preference number: 6 (lower is better)
Translates to: PEFFPALAPIMEPGP*LISSLFPFGVPGGF
Trigger: AAACCCACCTGGGACCCCAAAGGGAAAGAGAGAGCTGATGAGCAATGGCCCAGGTTCCATTATTGGTGCTAAAGCTGGGAAGAATTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS TCA 72 bp TCGAACTCCAGCTTGTTTTCTGGGTCTAAGTGTGCATaGGCCTGGTGGTACCTCAGGCCGTTAATGTGCTTG +
Preference number: 6 (lower is better)
Translates to: SNSSLFSGSKCA*AWWYLRPLMCL
Trigger: CAAGCACATTAACGGCCTGAGGTACCACCAGGCTCATGCACACTTAGACCCAGAAAACAAGCTGGAGTTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS TCA 72 bp AGGGCAGGATGTCTTTGTGTGATCACCGACTGGTGCTaGGGCTGTAAGGATGCAGAATTGTGGTCCACTTTC +
Preference number: 6 (lower is better)
Translates to: RAGCLCVITDWC*GCKDAELWSTF
Trigger: GAAAGTGGACCACAATTCTGCATCCTTACAGCCTCAGCACCAGTCGGTGATCACACAAAGACATCCTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CCA 72 bp TGCAGGGGCACCGACCTGCCCAGGGTGCATGTAACTTaGAGAATAATAAGGATCATAGCTGTGGTAATAGGG +
Preference number: 6 (lower is better)
Translates to: CRGTDLPRVHVT*RIIRIIAVVIG
Trigger: CCCTATTACCACAGCTATGATCCTTATTATTCTCCAAGTTACATGCACCCTGGGCAGGTCGGTGCCCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CAA 72 bp GTAAACAGGGGGTCAACCTTCTCAGTTTTCAGTTTCTaGATTCGCCTGTGGCTCTCCTCCTCCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: VNRGSTFSVFSF*IRLWLSSSSSS
Trigger: GGAAGAGGAGGAGGAGGAGAGCCACAGGCGAATCAAGAAACTGAAAACTGAGAAGGTTGACCCCCTGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306315.9
ENST00000503896.6
ENST00000505686.5
ENST00000509799.5
ENST00000513986.2
ENST00000613878.4
CDS CAA 72 bp TTCCCAGCTTTAGCACCAATAATGGAACCTGGGCCATaGCTCATCAGCTCTCTCTTTCCCTTTGGGGTCCCA +
Preference number: 6 (lower is better)
Translates to: FPALAPIMEPGP*LISSLFPFGVP
Trigger: TGGGACCCCAAAGGGAAAGAGAGAGCTGATGAGCAATGGCCCAGGTTCCATTATTGGTGCTAAAGCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CAA 72 bp CTGCAGGGGCACCGACCTGCCCAGGGTGCATGTAACTaGGAGAATAATAAGGATCATAGCTGTGGTAATAGG +
Preference number: 6 (lower is better)
Translates to: LQGHRPAQGACN*ENNKDHSCGNR
Trigger: CCTATTACCACAGCTATGATCCTTATTATTCTCCAAGTTACATGCACCCTGGGCAGGTCGGTGCCCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CAA 90 bp GGGATGCCGGTGCCTTCAACTGGTCATAAGCAGATACACTTGTGCTaGGCTCACTGCATTCAAGTGCCACATTACTCAATCCTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: GMPVPSTGHKQIHLC*AHCIQVPHYSILPH
Trigger: GTGAGGAAGGATTGAGTAATGTGGCACTTGAATGCAGTGAGCCAAGCACAAGTGTATCTGCTTATGACCAGTTGAAGGCACCGGCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CAA 90 bp CACCAGGGGATGCCGGTGCCTTCAACTGGTCATAAGCAGATACACTaGTGCTTGGCTCACTGCATTCAAGTGCCACATTACTCAATCCTT +
Preference number: 6 (lower is better)
Translates to: HQGMPVPSTGHKQIH*CLAHCIQVPHYSIL
Trigger: AAGGATTGAGTAATGTGGCACTTGAATGCAGTGAGCCAAGCACAAGTGTATCTGCTTATGACCAGTTGAAGGCACCGGCATCCCCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CAA 90 bp AAACTGCCGTCTGCTGCCGAGCAACTGTCTAACGCAGCCGTCATGTaGGAGATTACTGGAAGGTTGTTCAGTTCATTGTTAAGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: KLPSAAEQLSNAAVM*EITGRLFSSLLRPF
Trigger: GAAGGGCCTTAACAATGAACTGAACAACCTTCCAGTAATCTCCAACATGACGGCTGCGTTAGACAGTTGCTCGGCAGCAGACGGCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CAA 90 bp TATTTCCAGCTGCAGGGGCACCGACCTGCCCAGGGTGCATGTAACTaGGAGAATAATAAGGATCATAGCTGTGGTAATAGGGAGAATGGG +
Preference number: 6 (lower is better)
Translates to: YFQLQGHRPAQGACN*ENNKDHSCGNRENG
Trigger: CCCATTCTCCCTATTACCACAGCTATGATCCTTATTATTCTCCAAGTTACATGCACCCTGGGCAGGTCGGTGCCCCTGCAGCTGGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CCA 72 bp CATAGTACTTCTCATACTGCTGTCTATAGGCAGGGCTaGTGGCCATCAGAGACTTCTGGTCCATATAGAGCC +
Preference number: 6 (lower is better)
Translates to: HSTSHTAVYRQG*WPSETSGPYRA
Trigger: GGCTCTATATGGACCAGAAGTCTCTGATGGCCACCAGCCCTGCCTATAGACAGCAGTATGAGAAGTACTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CAA 72 bp GCCACATTACTCAATCCTTCCTCACAGTCCGAGATCTaGTCCTCACTGTCAGGCTCGAACTCCAGCTTGTTT +
Preference number: 6 (lower is better)
Translates to: ATLLNPSSQSEI*SSLSGSNSSLF
Trigger: AAACAAGCTGGAGTTCGAGCCTGACAGTGAGGACAAGATCTCGGACTGTGAGGAAGGATTGAGTAATGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CAA 72 bp GATATTTGGGCTGGTATACATAATGATGCCATGTTCTaGAATCTGGGTCCTGGGAGGGGCCCAGTCGTGCTT +
Preference number: 6 (lower is better)
Translates to: DIWAGIHNDAMF*NLGPGRGPVVL
Trigger: AAGCACGACTGGGCCCCTCCCAGGACCCAGATTCAAGAACATGGCATCATTATGTATACCAGCCCAAATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505686.5
ENST00000613878.4
CDS CAA 90 bp CATTCAAGTGCCACATTACTCAATCCTTCCTCACAGTCCGAGATCTaGTCCTCACTGTCAGGCTCGAACTCCAGCTTGTTTTCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: HSSATLLNPSSQSEI*SSLSGSNSSLFSGS
Trigger: AGACCCAGAAAACAAGCTGGAGTTCGAGCCTGACAGTGAGGACAAGATCTCGGACTGTGAGGAAGGATTGAGTAATGTGGCACTTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS TCA 72 bp TCATTCCGCCTTCAGTTCCAGACTTCAGAGTCACCGTaGTCAGTAATGATCCCATGTAGCAAACCTACAGGC +
Preference number: 6 (lower is better)
Translates to: SFRLQFQTSESP*SVMIPCSKPTG
Trigger: GCCTGTAGGTTTGCTACATGGGATCATTACTGATCACGGTGACTCTGAAGTCTGGAACTGAAGGCGGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513986.2
CDS CAA 72 bp CACTCTGGCTCTGTCACTACTCCAACTTCACATGTATaGACACCCACAGAACGAGTCCGAACCAAAAGCTGT +
Preference number: 6 (lower is better)
Translates to: HSGSVTTPTSHV*TPTERVRTKSC
Trigger: ACAGCTTTTGGTTCGGACTCGTTCTGTGGGTGTCAATACATGTGAAGTTGGAGTAGTGACAGAGCCAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306315.9
ENST00000503896.6
ENST00000504926.5
ENST00000505686.5
ENST00000509799.5
ENST00000511308.1
ENST00000513986.2
ENST00000613878.4
CDS CAA 72 bp ATGCCGGTGCCTTCAACTGGTCATAAGCAGATACACTaGTGCTTGGCTCACTGCATTCAAGTGCCACATTAC +
Preference number: 6 (lower is better)
Translates to: MPVPSTGHKQIH*CLAHCIQVPHY
Trigger: GTAATGTGGCACTTGAATGCAGTGAGCCAAGCACAAGTGTATCTGCTTATGACCAGTTGAAGGCACCGGCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CAA 72 bp CACTACTGGATGCAATCCATGTCCTCAAGCGGCCCATaGCTTCTAATAGGCACTTCCCTTGTACTAGCTGAA +
Preference number: 6 (lower is better)
Translates to: HYWMQSMSSSGP*LLIGTSLVLAE
Trigger: TTCAGCTAGTACAAGGGAAGTGCCTATTAGAAGCAATGGGCCGCTTGAGGACATGGATTGCATCCAGTAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511308.1
CDS TCA 72 bp ACTCTGGCTCTGTCACTACTCCAACTTCACATGTATTaGCACCCACAGAACGAGTCCGAACCAAAAGCTGTT +
Preference number: 6 (lower is better)
Translates to: TLALSLLQLHMY*HPQNESEPKAV
Trigger: AACAGCTTTTGGTTCGGACTCGTTCTGTGGGTGTCAATACATGTGAAGTTGGAGTAGTGACAGAGCCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306315.9
ENST00000503896.6
ENST00000504926.5
ENST00000505686.5
ENST00000509799.5
ENST00000511308.1
ENST00000513986.2
ENST00000613878.4
CDS GCA 72 bp AGCAGATACACTTGTGCTTGGCTCACTGCATTCAAGTaGCACATTACTCAATCCTTCCTCACAGTCCGAGAT +
Preference number: 6 (lower is better)
Translates to: SRYTCAWLTAFK*HITQSFLTVRD
Trigger: ATCTCGGACTGTGAGGAAGGATTGAGTAATGTGGCACTTGAATGCAGTGAGCCAAGCACAAGTGTATCTGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CAA 72 bp TCTGCTGCCGAGCAACTGTCTAACGCAGCCGTCATGTaGGAGATTACTGGAAGGTTGTTCAGTTCATTGTTA +
Preference number: 6 (lower is better)
Translates to: SAAEQLSNAAVM*EITGRLFSSLL
Trigger: TAACAATGAACTGAACAACCTTCCAGTAATCTCCAACATGACGGCTGCGTTAGACAGTTGCTCGGCAGCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CAA 90 bp TCTTTCCCTTCTTTGTCCTTTAGCTTTCGCTTCTCCTTTTTCTTTTaGTCTTTGAGTGACACCAGAGCTGGGTTCACGGTGATGGGCTCT +
Preference number: 6 (lower is better)
Translates to: SFPSLSFSFRFSFFF*SLSDTRAGFTVMGS
Trigger: AGAGCCCATCACCGTGAACCCAGCTCTGGTGTCACTCAAAGACAAAAAGAAAAAGGAGAAGCGAAAGCTAAAGGACAAAGAAGGGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS TCA 72 bp CATATAGAGCCCATATGCATACTGGCCATAATAAAGTaGCTGAGCCAGGGCAGGATGTCTTTGTGTGATCAC +
Preference number: 6 (lower is better)
Translates to: HIEPICILAIIK*LSQGRMSLCDH
Trigger: GTGATCACACAAAGACATCCTGCCCTGGCTCAGTCACTTTATTATGGCCAGTATGCATATGGGCTCTATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS GCA 72 bp ACTGGTCATAAGCAGATACACTTGTGCTTGGCTCACTaGATTCAAGTGCCACATTACTCAATCCTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: TGHKQIHLCLAH*IQVPHYSILPH
Trigger: GTGAGGAAGGATTGAGTAATGTGGCACTTGAATGCAGTGAGCCAAGCACAAGTGTATCTGCTTATGACCAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS GCA 72 bp GTTGGTACAGATTATTTTCATCTGCCTTTTGGTGAATaGGCCACTACTGGATGCAATCCATGTCCTCAAGCG +
Preference number: 6 (lower is better)
Translates to: VGTDYFHLPFGE*ATTGCNPCPQA
Trigger: CGCTTGAGGACATGGATTGCATCCAGTAGTGGCGCATTCACCAAAAGGCAGATGAAAATAATCTGTACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511308.1
CDS CCA 72 bp TGCCTTCAACTGGTCATAAGCAGATACACTTGTGCTTaGCTCACTGCATTCAAGTGCCACATTACTCAATCC +
Preference number: 6 (lower is better)
Translates to: CLQLVISRYTCA*LTAFKCHITQS
Trigger: GGATTGAGTAATGTGGCACTTGAATGCAGTGAGCCAAGCACAAGTGTATCTGCTTATGACCAGTTGAAGGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CAA 72 bp GTGCCTTCAACTGGTCATAAGCAGATACACTTGTGCTaGGCTCACTGCATTCAAGTGCCACATTACTCAATC +
Preference number: 6 (lower is better)
Translates to: VPSTGHKQIHLC*AHCIQVPHYSI
Trigger: GATTGAGTAATGTGGCACTTGAATGCAGTGAGCCAAGCACAAGTGTATCTGCTTATGACCAGTTGAAGGCAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CAA 90 bp GAGCAACTGTCTAACGCAGCCGTCATGTTGGAGATTACTGGAAGGTaGTTCAGTTCATTGTTAAGGCCCTTCTTTTTGCCAGAATTCTTC +
Preference number: 6 (lower is better)
Translates to: EQLSNAAVMLEITGR*FSSLLRPFFLPEFF
Trigger: GAAGAATTCTGGCAAAAAGAAGGGCCTTAACAATGAACTGAACAACCTTCCAGTAATCTCCAACATGACGGCTGCGTTAGACAGTTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CAA 72 bp GGACAGGGAAGGATGGAGAGTAAGGTGGCTCATGTATaGTCCTCACAGTCCAATATCAGGTTTAAAGGAAAA +
Preference number: 6 (lower is better)
Translates to: GQGRMESKVAHV*SSQSNIRFKGK
Trigger: TTTTCCTTTAAACCTGATATTGGACTGTGAGGACAATACATGAGCCACCTTACTCTCCATCCTTCCCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306315.9
CDS CAA 90 bp GAGATTACTGGAAGGTTGTTCAGTTCATTGTTAAGGCCCTTCTTTTaGCCAGAATTCTTCCCAGCTTTAGCACCAATAATGGAACCTGGG +
Preference number: 6 (lower is better)
Translates to: EITGRLFSSLLRPFF*PEFFPALAPIMEPG
Trigger: CCCAGGTTCCATTATTGGTGCTAAAGCTGGGAAGAATTCTGGCAAAAAGAAGGGCCTTAACAATGAACTGAACAACCTTCCAGTAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS GCA 72 bp AAATGCCTTTCCCACTCCACTCGGCAAACAAGCCTGTaGCTCATTTTACTTAAACACCAAATGATCAAGAAG +
Preference number: 6 (lower is better)
Translates to: KCLSHSTRQTSL*LILLKHQMIKK
Trigger: CTTCTTGATCATTTGGTGTTTAAGTAAAATGAGGCACAGGCTTGTTTGCCGAGTGGAGTGGGAAAGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513986.2
CDS CCA 72 bp TCAGTTTTATTAGGCACTGATGGCCCTAGTTTAGAATaGTTTTTGTTAGGCTCCGGAGTAGAGGGAGCTTTT +
Preference number: 6 (lower is better)
Translates to: SVLLGTDGPSLE*FLLGSGVEGAF
Trigger: AAAAGCTCCCTCTACTCCGGAGCCTAACAAAAACCATTCTAAACTAGGGCCATCAGTGCCTAATAAAACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CCA 72 bp ATGACAGACTTCATTTCTACAGCCTCCTTAATAAGCTaGTGGTTTTCCATCTGCTTAGCTTTGAAGCTGTCG +
Preference number: 6 (lower is better)
Translates to: MTDFISTASLIS*WFSICLALKLS
Trigger: CGACAGCTTCAAAGCTAAGCAGATGGAAAACCACCAGCTTATTAAGGAGGCTGTAGAAATGAAGTCTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CAA 72 bp TTATTAGGCACTGATGGCCCTAGTTTAGAATGGTTTTaGTTAGGCTCCGGAGTAGAGGGAGCTTTTGAGATT +
Preference number: 6 (lower is better)
Translates to: LLGTDGPSLEWF*LGSGVEGAFEI
Trigger: AATCTCAAAAGCTCCCTCTACTCCGGAGCCTAACAAAAACCATTCTAAACTAGGGCCATCAGTGCCTAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CAA 90 bp GATGCAGAATTGTGGTCCACTTTCTTAGAATCTAACTGCTCTGCCTaGTCTTTCTTTTCAGCATCTTCCTCAGACTCCTTCTTGATCTTC +
Preference number: 6 (lower is better)
Translates to: DAELWSTFLESNCSA*SFFSASSSDSFLIF
Trigger: GAAGATCAAGAAGGAGTCTGAGGAAGATGCTGAAAAGAAAGACAAGGCAGAGCAGTTAGATTCTAAGAAAGTGGACCACAATTCTGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS GCA 72 bp TCTTGTTTAAATCTCGAGGTTGGGTCTACACCTGTCTaGTTCATAGAGTCCATGACAGACTTCATTTCTACA +
Preference number: 6 (lower is better)
Translates to: SCLNLEVGSTPV*FIESMTDFIST
Trigger: TGTAGAAATGAAGTCTGTCATGGACTCTATGAAGCAGACAGGTGTAGACCCAACCTCGAGATTTAAACAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000513986.2
CDS CCA 72 bp CCAATCATCGCCACTGTCATAAGTATCAACTGTATTTaGATCCACACCTTTTCCTGCAGTAGAAATGTTCAC +
Preference number: 6 (lower is better)
Translates to: PIIATVISINCI*IHTFSCSRNVH
Trigger: GTGAACATTTCTACTGCAGGAAAAGGTGTGGATCCAAATACAGTTGATACTTATGACAGTGGCGATGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306315.9
ENST00000505686.5
ENST00000509799.5
ENST00000512940.1
ENST00000513986.2
ENST00000613878.4
CDS CAA 72 bp GGAAGGTTGTTCAGTTCATTGTTAAGGCCCTTCTTTTaGCCAGAATTCTTCCCAGCTTTAGCACCAATAATG +
Preference number: 6 (lower is better)
Translates to: GRLFSSLLRPFF*PEFFPALAPIM
Trigger: CATTATTGGTGCTAAAGCTGGGAAGAATTCTGGCAAAAAGAAGGGCCTTAACAATGAACTGAACAACCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000509799.5
ENST00000513986.2
CDS CAA 90 bp TTTCGGTCTGTATTGGATCGAGTTGACCTTTTCCTTCTAACTGCATaGAATGTGTTTGGTTGCAGCCGCTTTATTTTGGAAATTATAATC +
Preference number: 6 (lower is better)
Translates to: FRSVLDRVDLFLLTA*NVFGCSRFILEIII
Trigger: GATTATAATTTCCAAAATAAAGCGGCTGCAACCAAACACATTCAATGCAGTTAGAAGGAAAAGGTCAACTCGATCCAATACAGACCGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509799.5
CDS CCA 72 bp TATCAAGTTCTTCTGACTTTTGCTGATCCAGATATTTaGGCTGGTATACATAATGATGCCATGTTCTTGAAT +
Preference number: 6 (lower is better)
Translates to: YQVLLTFADPDI*AGIHNDAMFLN
Trigger: ATTCAAGAACATGGCATCATTATGTATACCAGCCCAAATATCTGGATCAGCAAAAGTCAGAAGAACTTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306315.9
ENST00000504926.5
ENST00000505686.5
ENST00000513986.2
ENST00000613878.4