RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF592 (Homo sapiens)

Ensembl gene IDs: ENSG00000166716

Ensembl transcript IDs: ENST00000299927.4, ENST00000559607.1, ENST00000560079.7

Found 882 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGGCACTCCTGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTaGCTTCCACCCTGCGGTGGGCTTCAGGCCTACCCCAGCGGCCAG +
Preference number: 1 (lower is better)
Translates to: PGTPGRSSQCSSAAA*LPPCGGLQAYPSGQ
Trigger: CTGGCCGCTGGGGTAGGCCTGAAGCCCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCAGGAGTGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CCA 90 bp TGGGACAACAGCTACGGCAGGTCTAGGTCTGGCTTTGCAGGTAGCTaGAAACAGGCCTGGGTTGCCCCACTGCCAGCTGGGGAGGCAGGG +
Preference number: 1 (lower is better)
Translates to: WDNSYGRSRSGFAGS*KQAWVAPLPAGEAG
Trigger: CCCTGCCTCCCCAGCTGGCAGTGGGGCAACCCAGGCCTGTTTCCAGCTACCTGCAAAGCCAGACCTAGACCTGCCGTAGCTGTTGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 90 bp GGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGAAGACTaGAGGCTTGACAGCTCGTCCACATTTCGGGGAACACCGTGGGTG +
Preference number: 1 (lower is better)
Translates to: GTREPGRLEDVSAED*RLDSSSTFRGTPWV
Trigger: CACCCACGGTGTTCCCCGAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR GCA 90 bp CTAAGCACCCGGCCAGCACCCTCTTCCCTTTACTCCACTACATCCTaGTGGGCGCAACCCCATGCCACCTGGGTTAGAGGTCAGACGACA +
Preference number: 1 (lower is better)
Translates to: LSTRPAPSSLYSTTS*WAQPHATWVRGQTT
Trigger: TGTCGTCTGACCTCTAACCCAGGTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCTGGCCGGGTGCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 90 bp TCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACCTaGGTTAGAGGTCAGACGACACCTCCACACAGCCTGCTCCTCGTG +
Preference number: 1 (lower is better)
Translates to: SLYSTTSCWAQPHAT*VRGQTTPPHSLLLV
Trigger: CACGAGGAGCAGGCTGTGTGGAGGTGTCGTCTGACCTCTAACCCAGGTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 90 bp CCGACCGTGGCTCTTTTTCATGTGGGACACGTAGCTCTCCCGATCTaGAACCCACTCCTGGCACTCCTGGCAGGTCCAGCCAGTGTTCCT +
Preference number: 1 (lower is better)
Translates to: PTVALFHVGHVALPI*NPLLALLAGPASVP
Trigger: AGGAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTGGGTTCCAGATCGGGAGAGCTACGTGTCCCACATGAAAAAGAGCCACGGTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR GCA 90 bp GGAACACCGTGGGTGCTCTTGACGTGTTGCATCAACTCCGGCTTCTaGACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACC +
Preference number: 1 (lower is better)
Translates to: GTPWVLLTCCINSGF*TNKSGHSGHLKTPT
Trigger: GGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACACGTCAAGAGCACCCACGGTGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CCA 90 bp GCTCTTGACGTGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTaGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTGAC +
Preference number: 1 (lower is better)
Translates to: ALDVLHQLRLLHEQE*ALRALEDAHLRLAD
Trigger: GTCAGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACACGTCAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR GCA 90 bp GGGGTCACGACAGGTGGTCAAACCTGCAATTCTACCATCTCTGCCTaGTCTCCAGCTACCACTGTGTCTGAGCAGGAAGGGATCCAGCCA +
Preference number: 1 (lower is better)
Translates to: GVTTGGQTCNSTISA*SPATTVSEQEGIQP
Trigger: TGGCTGGATCCCTTCCTGCTCAGACACAGTGGTAGCTGGAGAGCAGGCAGAGATGGTAGAATTGCAGGTTTGACCACCTGTCGTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR GCA 90 bp ATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCACACTaGCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTC +
Preference number: 1 (lower is better)
Translates to: MCLRRLLGVWKDCSH*RHGYRFNVRPWLFF
Trigger: GAAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CCA 90 bp GTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTaGAAGGACTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTC +
Preference number: 1 (lower is better)
Translates to: VSWLLRMCLRRLLGV*KDCSHCRHGYRFNV
Trigger: GACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR TCA 90 bp CGCCCTAAAGCCAATGTCACTAGCCTGGAGATCTTGGAGGTGACTTaGCCATTGTGGAGCCGCTCCCCTCACCCCTTCAGAAGGTCTCTA +
Preference number: 1 (lower is better)
Translates to: RPKANVTSLEILEVT*PLWSRSPHPFRRSL
Trigger: TAGAGACCTTCTGAAGGGGTGAGGGGAGCGGCTCCACAATGGTCAAGTCACCTCCAAGATCTCCAGGCTAGTGACATTGGCTTTAGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 90 bp CTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTaGAATAGGGTGGGGCCAGGCTCACTTGGAGAGGAATACAAGAGC +
Preference number: 1 (lower is better)
Translates to: LRDGTNRGSLGKTLG*NRVGPGSLGEEYKS
Trigger: GCTCTTGTATTCCTCTCCAAGTGAGCCTGGCCCCACCCTATTCCACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 90 bp TCTTTACTGTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTaGGGGTGTGGAAGGACTGTTCACACTGCCGGCATGGGTACCGCT +
Preference number: 1 (lower is better)
Translates to: SLLCHGCCGCVCAGC*GCGRTVHTAGMGTA
Trigger: AGCGGTACCCATGCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGTAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CCA 90 bp AGGAAGTATTGTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTaGGAAAGACCCTTGGGTGGAATAGGGTGGGGCCAGGCTCACTTG +
Preference number: 1 (lower is better)
Translates to: RKYCSPSEMGQTGEV*ERPLGGIGWGQAHL
Trigger: CAAGTGAGCCTGGCCCCACCCTATTCCACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAACAATACTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR GCA 90 bp AGGTGTAGAACTTCTTTACTGTGTCATGGTTGTTGCGGATGTGTTTaGGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCACACTGCCGGC +
Preference number: 1 (lower is better)
Translates to: RCRTSLLCHGCCGCV*AGCWGCGRTVHTAG
Trigger: GCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGTAAAGAAGTTCTACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CCA 90 bp TGGCTAAGGACAGAATCCAGGCCAGGACCCAGGTTTTCCAGGGACTaGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATG +
Preference number: 1 (lower is better)
Translates to: WLRTESRPGPRFSRD*LSIFPTHVLPRKEM
Trigger: CATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCTGGATTCTGTCCTTAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 90 bp TACCACGTTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTaGGGTGACAAGGCACAGATGGACTCCAAAGAGAACCTGGCACTT +
Preference number: 1 (lower is better)
Translates to: YHVSKCQRCDARGPP*GDKAQMDSKENLAL
Trigger: AAGTGCCAGGTTCTCTTTGGAGTCCATCTGTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAACGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR GCA 90 bp CCAGGAAGGAGATGTATATCTGGGGTCACGACAGGTGGTCAAACCTaGAATTCTACCATCTCTGCCTGCTCTCCAGCTACCACTGTGTCT +
Preference number: 1 (lower is better)
Translates to: PGRRCISGVTTGGQT*NSTISACSPATTVS
Trigger: AGACACAGTGGTAGCTGGAGAGCAGGCAGAGATGGTAGAATTGCAGGTTTGACCACCTGTCGTGACCCCAGATATACATCTCCTTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 90 bp CACGTTCTTCCCAGGAAGGAGATGTATATCTGGGGTCACGACAGGTaGTCAAACCTGCAATTCTACCATCTCTGCCTGCTCTCCAGCTAC +
Preference number: 1 (lower is better)
Translates to: HVLPRKEMYIWGHDR*SNLQFYHLCLLSSY
Trigger: GTAGCTGGAGAGCAGGCAGAGATGGTAGAATTGCAGGTTTGACCACCTGTCGTGACCCCAGATATACATCTCCTTCCTGGGAAGAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR TCA 90 bp CTGCAATTCTACCATCTCTGCCTGCTCTCCAGCTACCACTGTGTCTaGGCAGGAAGGGATCCAGCCAGTCATTTCAAACCCTTCTATCAG +
Preference number: 1 (lower is better)
Translates to: LQFYHLCLLSSYHCV*AGRDPASHFKPFYQ
Trigger: CTGATAGAAGGGTTTGAAATGACTGGCTGGATCCCTTCCTGCTCAGACACAGTGGTAGCTGGAGAGCAGGCAGAGATGGTAGAATTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 90 bp AGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTaGGGTCACGACAGGTGGTCAAACCTGCAATTCTACCATCTCTGC +
Preference number: 1 (lower is better)
Translates to: SIFPTHVLPRKEMYI*GHDRWSNLQFYHLC
Trigger: GCAGAGATGGTAGAATTGCAGGTTTGACCACCTGTCGTGACCCCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 90 bp GGTGCTGAATATACAGTGGTGAACAGGACAGAGGTTCCCCAGTCTTaGGGAAGGCAAAGTGTTGAGCTTACTGGGCCACAATTATCAAAT +
Preference number: 1 (lower is better)
Translates to: GAEYTVVNRTEVPQS*GRQSVELTGPQLSN
Trigger: ATTTGATAATTGTGGCCCAGTAAGCTCAACACTTTGCCTTCCCCAAGACTGGGGAACCTCTGTCCTGTTCACCACTGTATATTCAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR TCA 90 bp CAAAAGCCTGTGAAGCCAGTTGGATGGGAATTACTAACTCTATTGTaGAGGAGAGGAGACAGTGAGGTTAAGGGATTTGTTAAGAGCTGG +
Preference number: 1 (lower is better)
Translates to: QKPVKPVGWELLTLL*RRGDSEVKGFVKSW
Trigger: CCAGCTCTTAACAAATCCCTTAACCTCACTGTCTCCTCTCCTTCACAATAGAGTTAGTAATTCCCATCCAACTGGCTTCACAGGCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR TCA 90 bp CTCGGTTTCTTCTCCGTAAAATGGAGGACAACTGTGAGATCTTTGTaGGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGC +
Preference number: 1 (lower is better)
Translates to: LGFFSVKWRTTVRSL*GLKERITRKCSVRC
Trigger: GCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGATCTCACAGTTGTCCTCCATTTTACGGAGAAGAAACCGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR TCA 90 bp TTAAGTTGTAGTTTCTACAAGGGAAGGGATCTTATCTGTTTAACTTaGTCAGTAGAGCATTCACTGCAGCATAATGTGCAGATAAACGCT +
Preference number: 1 (lower is better)
Translates to: LSCSFYKGRDLICLT*SVEHSLQHNVQINA
Trigger: AGCGTTTATCTGCACATTATGCTGCAGTGAATGCTCTACTGATCAAGTTAAACAGATAAGATCCCTTCCCTTGTAGAAACTACAACTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp CATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGTCGGCACTCAGGGCACTTaGAGACGCCCACCTGCGTCT +
Preference number: 2 (lower is better)
Translates to: HKADVALQKGGPRKAGAVGTQGT*RRPPAS
Trigger: AGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCC...GACAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CCA 90 bp ACTGTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGTCCTCAGCCGCGGCCTaGCTTCCACCCTGCGGTGGG +
Preference number: 2 (lower is better)
Translates to: TVSWLLRMCLRRLLGVWKSSAAA*LPPCGG
Trigger: CCCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGA...CTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCTGCCCCACTGCCAGCTaGGGAGGCAGGGAAGTGGCA +
Preference number: 2 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASCPTAS*GGREVA
Trigger: TGCCACTTCCCTGCCTCCCCAGCTGGCAGTGGGGCA...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGGAGGAGGGGCAAGGTaGTCAAGGGCCCTCGCCAAA +
Preference number: 2 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASGGGAR*SRALAK
Trigger: TTTGGCGAGGGCCCTTGATCACCTTGCCCCTCCTCC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR GCA 90 bp GCAGCCACACTAGTGGCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTATCAACTCCGGCTTCTaGACGAACAAGAGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: AATLVAGGSVGTREPGRLINSGF*TNKSGH
Trigger: GTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGAT...AAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CCA 90 bp TGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGGTAGCTCTCCCGATCTaGAACCCACTCCTGGCACTC +
Preference number: 2 (lower is better)
Translates to: CIRLMWLSRREGRGKLGLVALPI*NPLLAL
Trigger: GAGTGCCAGGAGTGGGTTCCAGATCGGGAGAGCTAC...CAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGGGGAGGCAGGGAAGTaGCAGCCTTGCCAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAGEAGK*QPCQEE
Trigger: CTCTTCCTGGCAAGGCTGCCACTTCCCTGCCTCCCC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp TGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGTTTCGGGGAACACCGTaGGTGCTCTTGACGTGTTGC +
Preference number: 2 (lower is better)
Translates to: CIRLMWLSRREGRGKLGLFRGTP*VLLTCC
Trigger: GCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAA...CAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CCA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTTGGCTGGTGGCTCAGTaGGAACTCGAGAGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFWLVAQ*ELESQG
Trigger: GCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCA...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR TCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACATCTTGGAGGTGACTTaGCCATTGTGGAGCCGCTCC +
Preference number: 2 (lower is better)
Translates to: STLFPLLHYILLGATPCHILEVT*PLWSRS
Trigger: GGAGCGGCTCCACAATGGTCAAGTCACCTCCAAGAT...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp GCAGCCACACTAGTGGCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTCCACCTGCGTCTTGCTaGCATTCTGGTAAAAATGCT +
Preference number: 2 (lower is better)
Translates to: AATLVAGGSVGTREPGRLPPASC*HSGKNA
Trigger: AGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGG...AAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR GCA 90 bp TGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGTTGAAGACGCCCACCTaGGTCTTGCTGACATTCTGG +
Preference number: 2 (lower is better)
Translates to: CIRLMWLSRREGRGKLGLLKTPT*VLLTFW
Trigger: CCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAA...CAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR GCA 90 bp CATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGTCGTGCTCTTGACGTGTTaGATCAACTCCGGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: HKADVALQKGGPRKAGAVVLLTC*INSGFC
Trigger: GCAGAAGCCGGAGTTGATGCAACACGTCAAGAGCAC...GACAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR GCA 90 bp CATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGTCCTGTGTCATGGTTGTTaGGGATGTGTTTGCGCAGGC +
Preference number: 2 (lower is better)
Translates to: HKADVALQKGGPRKAGAVLCHGC*GCVCAG
Trigger: GCCTGCGCAAACACATCCGCAACAACCATGACACAG...GACAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGGCTTTGCAGGTAGCTaGAAACAGGCCTGGGTTGCC +
Preference number: 2 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASGFAGS*KQAWVA
Trigger: GGCAACCCAGGCCTGTTTCCAGCTACCTGCAAAGCC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAGAAATGTCAACGGTGTaGTGCTCGAGGCCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEEMSTV*CSRPSL
Trigger: CAAGGAGGGCCTCGAGCATCACACCGTTGACATTTC...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTCACCGTGGGTGCTCTTaGCGTGTTGCATCAACTCCG +
Preference number: 2 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFHRGCS*RVASTP
Trigger: CGGAGTTGATGCAACACGTCAAGAGCACCCACGGTG...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR GCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCACACCTCCACACAGCCTaGTCCTCGTGCTTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPHLHTA*SSCLGG
Trigger: CCCACCCAAGCACGAGGAGCAGGCTGTGTGGAGGTG...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR GCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACTACTCCACTACATCCTaGTGGGCGCAACCCCATGCC +
Preference number: 2 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHYSTTS*WAQPHA
Trigger: GGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTA...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR GCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAGCAGGGCACCCCAACTaGATGGGAAGTAGGAAAGCA +
Preference number: 2 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEAGHPN*MGSRKA
Trigger: TGCTTTCCTACTTCCCATGCAGTTGGGGTGCCCTGC...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGGGGCCAGGCTCACTTaGAGAGGAATACAAGAGCCT +
Preference number: 2 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASGARLT*RGIQEP
Trigger: AGGCTCTTGTATTCCTCTCCAAGTGAGCCTGGCCCC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAACCTGCTCCTCGTGCTTaGGTGGGCCCTGACTCCACC +
Preference number: 2 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQPAPRA*VGPDST
Trigger: GGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAGG...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTGTGTCCGCTGAAGACTaGAGGCTTGACAGCTCGTCC +
Preference number: 2 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFVSAED*RLDSSS
Trigger: GGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACAC...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CAA 90 bp TCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTaGGGTGGAATAGGGTGGGGCCAGGCTCACTTGGAGAGGAATACA +
Preference number: 2 (lower is better)
Translates to: SPSEMGQTGEVWERP*GGIGWGQAHLERNT
Trigger: TGTATTCCTCTCCAAGTGAGCCTGGCCCCACCCTATTCCACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CAA 90 bp TTCTTTACTGTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTaGGGGGTGTGGAAGGACTGTTCACACTGCCGGCATGGGTACCGC +
Preference number: 2 (lower is better)
Translates to: FFTVSWLLRMCLRRL*GVWKDCSHCRHGYR
Trigger: GCGGTACCCATGCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGTAAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR TCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGGTCAGATCAGACCCTaGGAGAACAGCTGTAGCTAC +
Preference number: 2 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASGQIRP*ENSCSY
Trigger: GTAGCTACAGCTGTTCTCTCAGGGTCTGATCTGACC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTGGCTTTGCAGGTAGCTaGAAACAGGCCTGGGTTGCC +
Preference number: 2 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVGFAGS*KQAWVA
Trigger: GGCAACCCAGGCCTGTTTCCAGCTACCTGCAAAGCC...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCAAACCACTGACAAGCTaGCAGCCTGTCAAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASKPLTS*QPVKAA
Trigger: GGCTGCTTTGACAGGCTGCCAGCTTGTCAGTGGTTT...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGGAGGAGGGGCAAGGTaGTCAAGGGCCCTCGCCAAA +
Preference number: 2 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYGGGAR*SRALAK
Trigger: TTTGGCGAGGGCCCTTGATCACCTTGCCCCTCCTCC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCACTGTGTGTTCCCTGTaGGGGTTAGGCAACCTTTTC +
Preference number: 2 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASTVCSL*GLGNLF
Trigger: GAAAAGGTTGCCTAACCCTCACAGGGAACACACAGT...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTTGTGCCTCTTCTTGTTaGAGACCATTTCACAGGAGC +
Preference number: 2 (lower is better)
Translates to: HEQEWALRALEDAHLRLACASSC*RPFHRS
Trigger: GCTCCTGTGAAATGGTCTTCAACAAGAAGAGGCACA...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCAACCCCATGCCACCTaGGTTAGAGGTCAGACGACA +
Preference number: 2 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVQPHAT*VRGQTT
Trigger: TGTCGTCTGACCTCTAACCCAGGTGGCATGGGGTTG...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGGCACCCCAACTGCATaGGAAGTAGGAAAGCAAATG +
Preference number: 2 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASGTPTA*EVGKQM
Trigger: CATTTGCTTTCCTACTTCCCATGCAGTTGGGGTGCC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp ATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTCATGTGGGACACGTAGCCACACTAGTGGCTGGTaGCTCAGTGGGAACTCGAGA +
Preference number: 2 (lower is better)
Translates to: MGTASMSDRGSFSCGTRSHTSGW*LSGNSR
Trigger: TCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTG...GCTACGTGTCCCACATGAAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR TCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGAAACTGCCTGGTGCTaGATATACAGTGGTGAACAG +
Preference number: 2 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASETAWC*IYSGEQ
Trigger: CTGTTCACCACTGTATATTCAGCACCAGGCAGTTTC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR GCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACCAATTCTACCATCTCTaGCTGCTCTCCAGCTACCAC +
Preference number: 2 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHQFYHL*LLSSYH
Trigger: GTGGTAGCTGGAGAGCAGGCAGAGATGGTAGAATTG...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATTCCACTACATCCTGCTaGGCGCAACCCCATGCCACC +
Preference number: 2 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYSTTSC*AQPHAT
Trigger: GGTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGA...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATAGCTGGAAACAGGCCTaGGTTGCCCCACTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYSWKQA*VAPLPA
Trigger: AGCTGGCAGTGGGGCAACCCAGGCCTGTTTCCAGCT...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCAAGGAGATGTATATCTaGGGTCACGACAGGTGGTCA +
Preference number: 2 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASKEMYI*GHDRWS
Trigger: TGACCACCTGTCGTGACCCCAGATATACATCTCCTT...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGTGACAAGGCACAGATaGACTCCAAAGAGAACCTGG +
Preference number: 2 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAVTRHR*TPKRTW
Trigger: CCAGGTTCTCTTTGGAGTCCATCTGTGCCTTGTCAC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCAAGACCAGAAGATGCTaGACTCTGAGGGAACTGTGT +
Preference number: 2 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASKTRRC*TLRELC
Trigger: ACACAGTTCCCTCAGAGTCCAGCATCTTCTGGTCTT...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CAA 90 bp GTCTGGGAAAGACCCTTGGGTGGAATAGGGTGGGGCCAGGCTCACTaGGAGAGGAATACAAGAGCCTACCTGCATGGTGAGAAGATTTTT +
Preference number: 2 (lower is better)
Translates to: VWERPLGGIGWGQAH*ERNTRAYLHGEKIF
Trigger: AAAAATCTTCTCACCATGCAGGTAGGCTCTTGTATTCCTCTCCAAGTGAGCCTGGCCCCACCCTATTCCACCCAAGGGTCTTTCCCAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAATGCCTCCTTGAAAGATaGCCTCTAAGCACCCGGCCA +
Preference number: 2 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQCLLER*PLSTRP
Trigger: TGGCCGGGTGCTTAGAGGTCATCTTTCAAGGAGGCA...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAATGGAACCCATTCCTGTaGATGGACCCAGGGTACAGG +
Preference number: 2 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQWNPFL*MDPGYR
Trigger: CCTGTACCCTGGGTCCATTCACAGGAATGGGTTCCA...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATAGCTACCACTGTGTCTaGGCAGGAAGGGATCCAGCC +
Preference number: 2 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYSYHCV*AGRDPA
Trigger: GGCTGGATCCCTTCCTGCTCAGACACAGTGGTAGCT...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACAAGGAGATGTATATCTaGGGTCACGACAGGTGGTCA +
Preference number: 2 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHKEMYI*GHDRWS
Trigger: TGACCACCTGTCGTGACCCCAGATATACATCTCCTT...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR GCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAACTAGAATCTAGAAGGTaGTGTCTTGGTCAGATCAGA +
Preference number: 2 (lower is better)
Translates to: GFLCPVPKAPVASVGEGELESRR*CLGQIR
Trigger: TCTGATCTGACCAAGACAGCACCTTCTAGATTCTAG...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCATGGGGTCACGACAGGTaGTCAAACCTGCAATTCTAC +
Preference number: 2 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPWGHDR*SNLQFY
Trigger: GTAGAATTGCAGGTTTGACCACCTGTCGTGACCCCA...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAATGTTGAAAATCAACTaGAGGAAAGATGAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEMLKIN*RKDEGA
Trigger: GGCACCTTCATCTTTCCTTCAGTTGATTTTCAACAT...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAATATTTAATGCCTCCTTaGAAGATGACCTCTAAGCAC +
Preference number: 2 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEYLMPP*KMTSKH
Trigger: GTGCTTAGAGGTCATCTTTCAAGGAGGCATTAAATA...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTTACTAACTCTATTGTaGAGGAGAGGAGACAGTGAG +
Preference number: 2 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKALLTLL*RRGDSE
Trigger: CTCACTGTCTCCTCTCCTTCACAATAGAGTTAGTAA...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGGGGGCCAGGCTCACTTaGAGAGGAATACAAGAGCCT +
Preference number: 2 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWGARLT*RGIQEP
Trigger: AGGCTCTTGTATTCCTCTCCAAGTGAGCCTGGCCCC...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGGGGTTCTCTTATGTTaGAAATCAACTGAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAGVLLC*KSTEGK
Trigger: CTTTCCTTCAGTTGATTTTCAACATAAGAGAACCCC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGCTGTAGCTACCAATTaGATCAGATTCATTCATTCA +
Preference number: 2 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAAVATN*IRFIHS
Trigger: TGAATGAATGAATCTGATTCAATTGGTAGCTACAGC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR GCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGCAATTCTACCATCTCTaGCTGCTCTCCAGCTACCAC +
Preference number: 2 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWQFYHL*LLSSYH
Trigger: GTGGTAGCTGGAGAGCAGGCAGAGATGGTAGAATTG...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCTTTCCACTAAAAACTTaGCATTTGATAGAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASFPLKT*HLIEGK
Trigger: TTTCCCCTCTATCAAATGCCAAGTTTTTAGTGGAAA...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATCCACTACATCCTGCTaGGCGCAACCCCATGCCACC +
Preference number: 2 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLSTTSC*AQPHAT
Trigger: GGTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACTTTCCACTAAAAACTTaGCATTTGATAGAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHFPLKT*HLIEGK
Trigger: TTTCCCCTCTATCAAATGCCAAGTTTTTAGTGGAAA...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAAGCTGGAAACAGGCCTaGGTTGCCCCACTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLSWKQA*VAPLPA
Trigger: AGCTGGCAGTGGGGCAACCCAGGCCTGTTTCCAGCT...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAAGGGGTTCTCTTATGTTaGAAATCAACTGAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQGVLLC*KSTEGK
Trigger: CTTTCCTTCAGTTGATTTTCAACATAAGAGAACCCC...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAATCTTGGAGGTGACTTaGCCATTGTGGAGCCGCTCC +
Preference number: 2 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKILEVT*PLWSRS
Trigger: GGAGCGGCTCCACAATGGTCAAGTCACCTCCAAGAT...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATTATTTAATGCCTCCTTaGAAGATGACCTCTAAGCAC +
Preference number: 2 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYYLMPP*KMTSKH
Trigger: GTGCTTAGAGGTCATCTTTCAAGGAGGCATTAAATA...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR TCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATGGAACCCATTCCTGTaGATGGACCCAGGGTACAGG +
Preference number: 2 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLWNPFL*MDPGYR
Trigger: CCTGTACCCTGGGTCCATTCACAGGAATGGGTTCCA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGTTCTCCCTCAGAGATaGGACAAACAGGGGAAGTCT +
Preference number: 2 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKVLPQR*DKQGKS
Trigger: AGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAGTTCTCCCTCAGAGATaGGACAAACAGGGGAAGTCT +
Preference number: 2 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKVLPQR*DKQGKS
Trigger: AGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 72 bp CCTGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTaGCTTCCACCCTGCGGTGGGCTTCAGGCCTACCCC +
Preference number: 3 (lower is better)
Translates to: PGRSSQCSSAAA*LPPCGGLQAYP
Trigger: GGGGTAGGCCTGAAGCCCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CCA 72 bp AGGCAGGGAGCTGCTCCGAGCAGCCACACTAGTGGCTaGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCT +
Preference number: 3 (lower is better)
Translates to: RQGAAPSSHTSG*WLSGNSRARAA
Trigger: AGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCTGCTCGGAGCAGCTCCCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CAA 90 bp CATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGTCGGGCACTCAGGGCACTaGAAGACGCCCACCTGCGTC +
Preference number: 3 (lower is better)
Translates to: HKADVALQKGGPRKAGAVGHSGH*KTPTCV
Trigger: GACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCC...GACAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR GCA 72 bp CGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCACACTaGCGGCATGGGTACCGCTTCAATGTCCGACCGTGG +
Preference number: 3 (lower is better)
Translates to: RRLLGVWKDCSH*RHGYRFNVRPW
Trigger: CCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CAA 90 bp GCAGCCACACTAGTGGCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGGTGCTCTTGACGTGTaGCATCAACTCCGGCTTCTG +
Preference number: 3 (lower is better)
Translates to: AATLVAGGSVGTREPGRLGALDV*HQLRLL
Trigger: CAGAAGCCGGAGTTGATGCAACACGTCAAGAGCACC...AAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CAA 90 bp ATGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGAGAGCCAGGGCGGCTaGAGGATGTGTCCGCTGAAG +
Preference number: 3 (lower is better)
Translates to: MHKADVALQKGGPRKAGAESQGG*RMCPLK
Trigger: CTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTC...AGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR GCA 72 bp CGGCCAGCACCCTCTTCCCTTTACTCCACTACATCCTaGTGGGCGCAACCCCATGCCACCTGGGTTAGAGGT +
Preference number: 3 (lower is better)
Translates to: RPAPSSLYSTTS*WAQPHATWVRG
Trigger: ACCTCTAACCCAGGTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 72 bp TCCACTACATCCTGCTGGGCGCAACCCCATGCCACCTaGGTTAGAGGTCAGACGACACCTCCACACAGCCTG +
Preference number: 3 (lower is better)
Translates to: STTSCWAQPHAT*VRGQTTPPHSL
Trigger: CAGGCTGTGTGGAGGTGTCGTCTGACCTCTAACCCAGGTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CAA 90 bp TGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGTTGTTGCGGATGTGTTaGCGCAGGCTGTTGGGGGTG +
Preference number: 3 (lower is better)
Translates to: CIRLMWLSRREGRGKLGLLLRMC*RRLLGV
Trigger: CACCCCCAACAGCCTGCGCAAACACATCCGCAACAA...CAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CCA 72 bp ATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACAGATaGACTCCAAAGAGAACCTGGCACTTGGCAGGGCAC +
Preference number: 3 (lower is better)
Translates to: MLEALLGVTRHR*TPKRTWHLAGH
Trigger: GTGCCCTGCCAAGTGCCAGGTTCTCTTTGGAGTCCATCTGTGCCTTGTCACCCCAAGGAGGGCCTCGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 72 bp GAGCCAGGGCGGCTTGAGGATGTGTCCGCTGAAGACTaGAGGCTTGACAGCTCGTCCACATTTCGGGGAACA +
Preference number: 3 (lower is better)
Translates to: EPGRLEDVSAED*RLDSSSTFRGT
Trigger: TGTTCCCCGAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACACATCCTCAAGCCGCCCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CCA 72 bp TTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTaGAAGGACTGTTCACACTGCCGGCATGGGTACCGC +
Preference number: 3 (lower is better)
Translates to: LLRMCLRRLLGV*KDCSHCRHGYR
Trigger: GCGGTACCCATGCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CAA 90 bp CATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGTCACACCGTGGGTGCTCTaGACGTGTTGCATCAACTCC +
Preference number: 3 (lower is better)
Translates to: HKADVALQKGGPRKAGAVTPWVL*TCCINS
Trigger: GGAGTTGATGCAACACGTCAAGAGCACCCACGGTGT...GACAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CCA 72 bp TCAGACGACACCTCCACACAGCCTGCTCCTCGTGCTTaGGTGGGCCCTGACTCCACCATCAGTGAAAAGACA +
Preference number: 3 (lower is better)
Translates to: SDDTSTQPAPRA*VGPDSTISEKT
Trigger: TGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAGGCTGTGTGGAGGTGTCGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 72 bp GTGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTaGGCACTCAGGGCACTTGAAGACGCCCACCTGCGT +
Preference number: 3 (lower is better)
Translates to: VLHQLRLLHEQE*ALRALEDAHLR
Trigger: ACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CAA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGTGGGGCCAGGCTCACTaGGAGAGGAATACAAGAGCC +
Preference number: 3 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVWGQAH*ERNTRA
Trigger: GGCTCTTGTATTCCTCTCCAAGTGAGCCTGGCCCCA...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 72 bp TGTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTaGGAAAGACCCTTGGGTGGAATAGGGTGGGGCCAG +
Preference number: 3 (lower is better)
Translates to: CSPSEMGQTGEV*ERPLGGIGWGQ
Trigger: CTGGCCCCACCCTATTCCACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 72 bp TGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTaGGGGTGTGGAAGGACTGTTCACACTGCCGGCATG +
Preference number: 3 (lower is better)
Translates to: CHGCCGCVCAGC*GCGRTVHTAGM
Trigger: CATGCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CAA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGGGAAACAGGCCTGGGTaGCCCCACTGCCAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWGNRPG*PHCQLG
Trigger: CCCCAGCTGGCAGTGGGGCAACCCAGGCCTGTTTCC...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CAA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGGTCTAGGTCTGGCTTaGCAGGTAGCTGGAAACAGG +
Preference number: 3 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHGLGLA*QVAGNR
Trigger: CCTGTTTCCAGCTACCTGCAAAGCCAGACCTAGACC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CAA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAACCTGTCAAAGCAGCCTaGGTCACTAACGAGCACAGT +
Preference number: 3 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEPVKAA*VTNEHS
Trigger: ACTGTGCTCGTTAGTGACCAAGGCTGCTTTGACAGG...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CAA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAGGGGAAGGCAAAGTGTaGAGCTTACTGGGCCACAAT +
Preference number: 3 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEGEGKV*SLLGHN
Trigger: ATTGTGGCCCAGTAAGCTCAACACTTTGCCTTCCCC...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR GCA 72 bp TGGGTGCTCTTGACGTGTTGCATCAACTCCGGCTTCTaGACGAACAAGAGTGGGCACTCAGGGCACTTGAAG +
Preference number: 3 (lower is better)
Translates to: WVLLTCCINSGF*TNKSGHSGHLK
Trigger: CTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACACGTCAAGAGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CCA 72 bp AAATCAGGGTTTCTGATGCCATGCATAAGGCTGATGTaGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: KSGFLMPCIRLM*LSRREGRGKLG
Trigger: CCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCATGGCATCAGAAACCCTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR-3UTR CAA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTGATCTTGGAGGTGACTaGACCATTGTGGAGCCGCTC +
Preference number: 3 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVDLGGD*TIVEPL
Trigger: GAGCGGCTCCACAATGGTCAAGTCACCTCCAAGATC...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR GCA 72 bp ACAGGTGGTCAAACCTGCAATTCTACCATCTCTGCCTaGTCTCCAGCTACCACTGTGTCTGAGCAGGAAGGG +
Preference number: 3 (lower is better)
Translates to: TGGQTCNSTISA*SPATTVSEQEG
Trigger: CCCTTCCTGCTCAGACACAGTGGTAGCTGGAGAGCAGGCAGAGATGGTAGAATTGCAGGTTTGACCACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 72 bp TCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTaGGGTGACAAGGCACAGATGGACTCCAAAGAGAAC +
Preference number: 3 (lower is better)
Translates to: SKCQRCDARGPP*GDKAQMDSKEN
Trigger: GTTCTCTTTGGAGTCCATCTGTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 72 bp CCCAGGAAGGAGATGTATATCTGGGGTCACGACAGGTaGTCAAACCTGCAATTCTACCATCTCTGCCTGCTC +
Preference number: 3 (lower is better)
Translates to: PRKEMYIWGHDR*SNLQFYHLCLL
Trigger: GAGCAGGCAGAGATGGTAGAATTGCAGGTTTGACCACCTGTCGTGACCCCAGATATACATCTCCTTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CAA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGTGGGGCCAGGCTCACTaGGAGAGGAATACAAGAGCC +
Preference number: 3 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWWGQAH*ERNTRA
Trigger: GGCTCTTGTATTCCTCTCCAAGTGAGCCTGGCCCCA...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CAA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGGTCTAGGTCTGGCTTaGCAGGTAGCTGGAAACAGG +
Preference number: 3 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYGLGLA*QVAGNR
Trigger: CCTGTTTCCAGCTACCTGCAAAGCCAGACCTAGACC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CAA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAACCTGTCAAAGCAGCCTaGGTCACTAACGAGCACAGT +
Preference number: 3 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQPVKAA*VTNEHS
Trigger: ACTGTGCTCGTTAGTGACCAAGGCTGCTTTGACAGG...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR GCA 72 bp AGATGTATATCTGGGGTCACGACAGGTGGTCAAACCTaGAATTCTACCATCTCTGCCTGCTCTCCAGCTACC +
Preference number: 3 (lower is better)
Translates to: RCISGVTTGGQT*NSTISACSPAT
Trigger: GGTAGCTGGAGAGCAGGCAGAGATGGTAGAATTGCAGGTTTGACCACCTGTCGTGACCCCAGATATACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR GCA 72 bp ACTTCTTTACTGTGTCATGGTTGTTGCGGATGTGTTTaGGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCAC +
Preference number: 3 (lower is better)
Translates to: TSLLCHGCCGCV*AGCWGCGRTVH
Trigger: GTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGTAAAGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CCA 72 bp CCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTaGGGTCACGACAGGTGGTCAAACCTGCAATTCTAC +
Preference number: 3 (lower is better)
Translates to: PTHVLPRKEMYI*GHDRWSNLQFY
Trigger: GTAGAATTGCAGGTTTGACCACCTGTCGTGACCCCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 72 bp AGAGGAGACAGTGAGGTTAAGGGATTTGTTAAGAGCTaGCTAAGGACAGAATCCAGGCCAGGACCCAGGTTT +
Preference number: 3 (lower is better)
Translates to: RGDSEVKGFVKS*LRTESRPGPRF
Trigger: AAACCTGGGTCCTGGCCTGGATTCTGTCCTTAGCCAGCTCTTAACAAATCCCTTAACCTCACTGTCTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CAA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAAGCTGTAGCTACCAATaGAATCAGATTCATTCATTC +
Preference number: 3 (lower is better)
Translates to: GFLCPVPKAPVASVGEGESCSYQ*NQIHSF
Trigger: GAATGAATGAATCTGATTCAATTGGTAGCTACAGCT...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CAA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGTATACCCTTTTGTATaGTGGAATGTCTTACCATGT +
Preference number: 3 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAVYPFV*WNVLPC
Trigger: ACATGGTAAGACATTCCACAATACAAAAGGGTATAC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CAA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGATCTTGGAGGTGACTaGACCATTGTGGAGCCGCTC +
Preference number: 3 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKDLGGD*TIVEPL
Trigger: GAGCGGCTCCACAATGGTCAAGTCACCTCCAAGATC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR-3UTR CAA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAATTTCCACTAAAAACTaGGCATTTGATAGAGGGGAA +
Preference number: 3 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPISTKN*AFDRGE
Trigger: TTCCCCTCTATCAAATGCCAAGTTTTTAGTGGAAAT...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR TCA 72 bp ATAACAGTGATTAACTCTGGAGAGGGGACTAGAGGCTaGCCTCCATGGGGAAGCTTACCATTTATTGTATAC +
Preference number: 3 (lower is better)
Translates to: ITVINSGEGTRG*PPWGSLPFIVY
Trigger: GTATACAATAAATGGTAAGCTTCCCCATGGAGGTCAGCCTCTAGTCCCCTCTCCAGAGTTAATCACTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR TCA 72 bp GAATCTAGAAGGTGCTGTCTTGGTCAGATCAGACCCTaGGAGAACAGCTGTAGCTACCAATTGAATCAGATT +
Preference number: 3 (lower is better)
Translates to: ESRRCCLGQIRP*ENSCSYQLNQI
Trigger: AATCTGATTCAATTGGTAGCTACAGCTGTTCTCTCAGGGTCTGATCTGACCAAGACAGCACCTTCTAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR TCA 72 bp GTGAAGCCAGTTGGATGGGAATTACTAACTCTATTGTaGAGGAGAGGAGACAGTGAGGTTAAGGGATTTGTT +
Preference number: 3 (lower is better)
Translates to: VKPVGWELLTLL*RRGDSEVKGFV
Trigger: AACAAATCCCTTAACCTCACTGTCTCCTCTCCTTCACAATAGAGTTAGTAATTCCCATCCAACTGGCTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CCA 72 bp CACATTCATAAGCTCACAAAAGCCTGTGAAGCCAGTTaGATGGGAATTACTAACTCTATTGTGAAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: HIHKLTKACEAS*MGITNSIVKER
Trigger: CCTCTCCTTCACAATAGAGTTAGTAATTCCCATCCAACTGGCTTCACAGGCTTTTGTGAGCTTATGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR TCA 72 bp TTCTCCGTAAAATGGAGGACAACTGTGAGATCTTTGTaGGGATTAAAGGAGAGAATCACCAGAAAGTGTTCA +
Preference number: 3 (lower is better)
Translates to: FSVKWRTTVRSL*GLKERITRKCS
Trigger: TGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGATCTCACAGTTGTCCTCCATTTTACGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR TCA 72 bp AGTTTCTACAAGGGAAGGGATCTTATCTGTTTAACTTaGTCAGTAGAGCATTCACTGCAGCATAATGTGCAG +
Preference number: 3 (lower is better)
Translates to: SFYKGRDLICLT*SVEHSLQHNVQ
Trigger: CTGCACATTATGCTGCAGTGAATGCTCTACTGATCAAGTTAAACAGATAAGATCCCTTCCCTTGTAGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTTCCACCCTGCGGTGGCCACTGGCCGGCACGTaGATCCTGCTGTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: WQVQPVFLSRGLASTLRWPLAGT*ILLSAG
Trigger: GCCTGCGGACAGCAGGATCCACGTGCCGGCCAGTGG...CCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp TGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTTCCACCCTGCGGTGGTTGCTGGTGGGGAGCTaGCAGCCACAGACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: WQVQPVFLSRGLASTLRWLLVGS*QPQTVS
Trigger: GCTCACCGTCTGTGGCTGCCAGCTCCCCACCAGCAA...CCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp TGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTTCCACCCTGCGGTGGTCCCCCATGGCTGGATaGTGGCAAGGGCTGACTGGT +
Preference number: 4 (lower is better)
Translates to: WQVQPVFLSRGLASTLRWSPMAG*WQGLTG
Trigger: ACCAGTCAGCCCTTGCCAGCATCCAGCCATGGGGGA...CCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GCAGCCACACTAGTGGCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTCCCGGAGCCCTCCTCTaGCTCTGCCACCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: AATLVAGGSVGTREPGRLPGALL*LCHLHC
Trigger: GCAGTGGAGGTGGCAGAGCCAGAGGAGGGCTCCGGG...AAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp GCAGCCACACTAGTGGCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGGCAGCCACAGACGGTaGGCCTTTGCTGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: AATLVAGGSVGTREPGRLGSHRR*AFAAAV
Trigger: GACAGCAGCAGCAAAGGCTCACCGTCTGTGGCTGCC...AAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp TGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTTCCACCCTGCGGTGGGTGTTCTGCCCACTTTaGTCGTGTTCCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: WQVQPVFLSRGLASTLRWVFCPL*SCSCWL
Trigger: GAGCCAGCAGGAACACGAGCAAAGTGGGCAGAACAC...CCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGTCCCCCTGGCATCTCGCTaGGGGCCTCTGCAATGGCGC +
Preference number: 4 (lower is better)
Translates to: HKADVALQKGGPRKAGAVPLASR*GPLQWR
Trigger: GCGCCATTGCAGAGGCCCCCAGCGAGATGCCAGGGG...GACAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CACTCCTGGCACTCCTGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTGCCCAGAACTGCAGCTaGGAGATGACGAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: HSWHSWQVQPVFLSRGLAAQNCS*EMTSHW
Trigger: CCAGTGACTCGTCATCTCCCAGCTGCAGTTCTGGGC...AGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGAAGACTGGAGGGGGCTGCTGGTGCCGTaGAGTTCACAGGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: VGTREPGRLEDVSAEDWRGLLVP*SSQGPT
Trigger: TGTCGGCCCCTGTGAACTCCACGGCACCAGCAGCCC...CCTCCAGTCTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CACTCCTGGCACTCCTGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTAGCCACACTAGTGGCTaGTGGCTCAGTGGGAACTCG +
Preference number: 4 (lower is better)
Translates to: HSWHSWQVQPVFLSRGLASHTSG*WLSGNS
Trigger: CGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCT...AGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCATCCTCAGCCGCGGCCTaGCTTCCACCCTGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPSSAAA*LPPCGG
Trigger: CCCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGA...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CACTCCTGGCACTCCTGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTGCTGACTGGTATCCGTaGCAGGTAGGGACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HSWHSWQVQPVFLSRGLAADWYP*QVGTSS
Trigger: AGAGGAGGTCCCTACCTGCCACGGATACCAGTCAGC...AGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp TGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTTCCACCCTGCGGTGGTTTCTCCGCTTCAAATaGCTCCTGGCGGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: WQVQPVFLSRGLASTLRWFLRFK*LLAAGV
Trigger: AACACCAGCCGCCAGGAGTCATTTGAAGCGGAGAAA...CCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp GCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGGGGACTTGTGTGCATaGATCCGCTGGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: AGGSVGTREPGRLEDVSAGDLCA*IRWWAQ
Trigger: CTGTGCCCACCAGCGGATTCATGCACACAAGTCCCC...AGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CACTCCTGGCACTCCTGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTCCCCGAAGAATCGAGTaGCATCCGGATCCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: HSWHSWQVQPVFLSRGLAPRRIE*HPDPCE
Trigger: CTCACAAGGATCCGGATGCCACTCGATTCTTCGGGG...AGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCACCCCTGGCATCTCGCTaGGGGCCTCTGCAATGGCGC +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPPLASR*GPLQWR
Trigger: GCGCCATTGCAGAGGCCCCCAGCGAGATGCCAGGGG...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGCAGCCTTTTTCACCTaGTGGACCAGGGGCACCGAC +
Preference number: 4 (lower is better)
Translates to: AGGSVGTREPGRLEDVSAAAFFT*WTRGTD
Trigger: GTCGGTGCCCCTGGTCCACCAGGTGAAAAAGGCTGC...AGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CACTCCTGGCACTCCTGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTTTCACACTGCCGGCATaGGTACCGCTTCAATGTCCG +
Preference number: 4 (lower is better)
Translates to: HSWHSWQVQPVFLSRGLAFTLPA*VPLQCP
Trigger: CGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAA...AGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp GCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTCACCGTGGGTGCTCTTaGCGTGTTGCATCAACTCCG +
Preference number: 4 (lower is better)
Translates to: AGGSVGTREPGRLEDVSAHRGCS*RVASTP
Trigger: CGGAGTTGATGCAACACGTCAAGAGCACCCACGGTG...AGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCACACTGCCGGCCCCGGGGCCCAGAACTaGAGCTGGGAGATGACGAGT +
Preference number: 4 (lower is better)
Translates to: GCVCAGCWGCGRTVHTAGPGAQN*SWEMTS
Trigger: ACTCGTCATCTCCCAGCTGCAGTTCTGGGCCCCGGG...GCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp CACTCCTGGCACTCCTGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTATGCCTGCAGTGCTGTaGTCTGTTGCTTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: HSWHSWQVQPVFLSRGLAMPAVL*SVASCL
Trigger: CAGGCAAGAAGCAACAGAGCACAGCACTGCAGGCAT...AGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp CATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGTCAGGGGCCAGGGTGGATaGCTGCAGTGCTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: HKADVALQKGGPRKAGAVRGQGG*LQCCAL
Trigger: CAGAGCACAGCACTGCAGGCATCCACCCTGGCCCCT...GACAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGGTGGGCACAGAAACTaGACTGGTTGGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGGSVGTREPGRLEDVSAGGHRN*TGWAAA
Trigger: TGCTGCTGCCCAACCAGTGCAGTTTCTGTGCCCACC...AGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTCACTGCCATCTCCGCTaGCGCCGCCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HEQEWALRALEDAHLRLAHCHLR*RRLLFL
Trigger: GAGGAAGAGGAGGCGGCGGCAGCGGAGATGGCAGTG...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTAGCCCCTTGCTCTTGTaGTCACGGGCGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: HEQEWALRALEDAHLRLASPLLL*SRACRS
Trigger: GCTCCGGCACGCCCGTGACCACAAGAGCAAGGGGCT...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CACTCCTGGCACTCCTGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTTGTCGCTCCTGGATGTaGCTTTTCAGCAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: HSWHSWQVQPVFLSRGLACRSWM*LFSKAK
Trigger: CTTGGCCTTGCTGAAAAGCCACATCCAGGAGCGACA...AGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CACTCCTGGCACTCCTGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTCTGCACGAACAAGAGTaGGCACTCAGGGCACTTGAA +
Preference number: 4 (lower is better)
Translates to: HSWHSWQVQPVFLSRGLALHEQE*ALRALE
Trigger: TTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAG...AGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACTCCTCAGCCGCGGCCTaGCTTCCACCCTGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHSSAAA*LPPCGG
Trigger: CCCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGA...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGTAGCTCTCCCGATCTaGAACCCACTCCTGGCACTC +
Preference number: 4 (lower is better)
Translates to: AGGSVGTREPGRLEDVSAVALPI*NPLLAL
Trigger: GAGTGCCAGGAGTGGGTTCCAGATCGGGAGAGCTAC...AGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAAGTCCAAACACCACCTaGCGGCGGCGGCGGCGACTG +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGESPNTT*RRRRRL
Trigger: CAGTCGCCGCCGCCGCCGCCAGGTGGTGTTTGGACT...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560079.7
CDS-3UTR TCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAACCCCTGGGGGCTCCCTaGATTTGTGCCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEPLGAP*ICACLR
Trigger: CCTGAGGCAGGCACAAATTCAGGGAGCCCCCAGGGG...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTTCCACCCTGCGGTGGCCACCTGCGTCTTGCTaGCATTCTGGTAAAAATGCT +
Preference number: 4 (lower is better)
Translates to: WQVQPVFLSRGLASTLRWPPASC*HSGKNA
Trigger: AGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGG...CCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTACGGTGAGCCTTTGCTaGTGCTGTCACTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: AGGSVGTREPGRLEDVSATVSLC*CCHCRC
Trigger: GCATCTGCAGTGACAGCAGCAGCAAAGGCTCACCGT...AGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCACCCGGGGCCCAGAACTaGAGCTGGGAGATGACGAGT +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPPGAQN*SWEMTS
Trigger: ACTCGTCATCTCCCAGCTGCAGTTCTGGGCCCCGGG...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCACCAAGTGCACGGCTTTaGGCAGGAGGTTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPPSARL*AGGWQG
Trigger: CCCCTGCCAACCTCCTGCCCAAAGCCGTGCACTTGG...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAAGCCCCTTGCTCTTGTaGTCACGGGCGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGESPLLL*SRACRS
Trigger: GCTCCGGCACGCCCGTGACCACAAGAGCAAGGGGCT...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTTTGGGCAGCAGCATTTaGCATACCTGGCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: AGGSVGTREPGRLEDVSALGSSI*HTWQVS
Trigger: GCTGACCTGCCAGGTATGCCAAATGCTGCTGCCCAA...AGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCATGGCTGGTGGCTCAGTaGGAACTCGAGAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPWLVAQ*ELESQG
Trigger: GCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCA...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTCATGTGGGACACGTAGCTCCTCAGCCGCGGCCTaGCTTCCACCCTGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: MGTASMSDRGSFSCGTRSSSAAA*LPPCGG
Trigger: CCCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGA...GCTACGTGTCCCACATGAAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCACACTGCCGGCCACTCCTGGCACTCCTaGCAGGTCCAGCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: GCVCAGCWGCGRTVHTAGHSWHS*QVQPVF
Trigger: GAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTG...GCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CAA 72 bp GGCGGCTTGAGGATGTGTCCGCTGAAGACTGGAGGCTaGACAGCTCGTCCACATTTCGGGGAACACCGTGGG +
Preference number: 4 (lower is better)
Translates to: GGLRMCPLKTGG*TARPHFGEHRG
Trigger: CCCACGGTGTTCCCCGAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACACATCCTCAAGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CAA 72 bp CTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTaGAGGATGTGTCCGCTGAAGACTGGAGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: LVAQWELESQGG*RMCPLKTGGLT
Trigger: TGTCAAGCCTCCAGTCTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp GCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGGGGCTGATCCTGAGTaGGACAAGGACACACTTTCA +
Preference number: 4 (lower is better)
Translates to: AGGSVGTREPGRLEDVSAGADPE*DKDTLS
Trigger: TGAAAGTGTGTCCTTGTCTCACTCAGGATCAGCCCC...AGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCCCCTGGGGGCTCCCTaGATTTGTGCCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVPLGAP*ICACLR
Trigger: CCTGAGGCAGGCACAAATTCAGGGAGCCCCCAGGGG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp ATGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTTGGCACTGCCCGAAGTaGGGCCATGTTTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: MHKADVALQKGGPRKAGAWHCPK*GHVWER
Trigger: CCTCTCCCAAACATGGCCTCACTTCGGGCAGTGCCA...AGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGAAGACTGGAGGCCTGCCTCAGGAAAGTaGTCTTCCACAGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: VGTREPGRLEDVSAEDWRPASGK*SSTGTS
Trigger: TGAGGTGCCTGTGGAAGAGCACTTTCCTGAGGCAGG...CCTCCAGTCTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACGCCAGGGTGGATGCCTaGAGTGCTGTGCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHARVDA*SAVLCC
Trigger: GCAACAGAGCACAGCACTGCAGGCATCCACCCTGGC...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAAGGGGCCAGGGTGGATaGCTGCAGTGCTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGERGQGG*LQCCAL
Trigger: CAGAGCACAGCACTGCAGGCATCCACCCTGGCCCCT...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACCACTGCCATCTCCGCTaGCGCCGCCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHHCHLR*RRLLFL
Trigger: GAGGAAGAGGAGGCGGCGGCAGCGGAGATGGCAGTG...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGTCCCCGGGCAAGCCCCTTaGACTCTCCAATACTGTTGC +
Preference number: 4 (lower is better)
Translates to: HKADVALQKGGPRKAGAVPGQAP*TLQYCC
Trigger: GCAACAGTATTGGAGAGTCCAAGGGGCTTGCCCGGG...GACAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCCTTTGGGCAGGAGGTTaGCAGGGGCCAGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASLWAGG*QGPGWM
Trigger: CATCCACCCTGGCCCCTGCCAACCTCCTGCCCAAAG...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGTCAGAGGGGCACGGGGTTaGAGCTGTGAAGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: HKADVALQKGGPRKAGAVRGARG*SCEGPC
Trigger: ACAAGGTCCTTCACAGCTCCAACCCCGTGCCCCTCT...GACAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTGGCAGCAGTACCCACTaGCCGGCACGTGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFGSSTH*PARGSC
Trigger: GCAGGATCCACGTGCCGGCCAGTGGGTACTGCTGCC...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGGCAGCAGTACCCACTaGCCGGCACGTGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHGSSTH*PARGSC
Trigger: GCAGGATCCACGTGCCGGCCAGTGGGTACTGCTGCC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGGGCTGCTGGTGCCGTaGAGTTCACAGGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHGLLVP*SSQGPT
Trigger: TGTCGGCCCCTGTGAACTCCACGGCACCAGCAGCCC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CACTCCTGGCACTCCTGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTCAGAATGCACATTTGTaGAAAACCTGGCAGTGTCGC +
Preference number: 4 (lower is better)
Translates to: HSWHSWQVQPVFLSRGLAQNAHL*KTWQCR
Trigger: GCGACACTGCCAGGTTTTCCACAAATGTGCATTCTG...AGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCCCGGAGCCCTCCTCTaGCTCTGCCACCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVPGALL*LCHLHC
Trigger: GCAGTGGAGGTGGCAGAGCCAGAGGAGGGCTCCGGG...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAGGAAAGACCCTTGGGTaGAATAGGGTGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPGKTLG*NRVGPG
Trigger: GCCTGGCCCCACCCTATTCCACCCAAGGGTCTTTCC...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACTCCACTACATCCTGCTaGGCGCAACCCCATGCCACC +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHSTTSC*AQPHAT
Trigger: GGTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGA...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACTGCCCCACTGCCAGCTaGGGAGGCAGGGAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHCPTAS*GGREVA
Trigger: TGCCACTTCCCTGCCTCCCCAGCTGGCAGTGGGGCA...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAAGCTGGAAACAGGCCTaGGTTGCCCCACTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPSWKQA*VAPLPA
Trigger: AGCTGGCAGTGGGGCAACCCAGGCCTGTTTCCAGCT...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGGCATCCGGATCCTTGTaGGGTTCCACTGTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CIRLMWLSRREGRGKLGLASGSL*GSTVFC
Trigger: GCAGAACACAGTGGAACCTCACAAGGATCCGGATGC...CAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp TGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGAGACTTGGCTGTCACTaGTGCAGCAACACTGTGGGG +
Preference number: 4 (lower is better)
Translates to: CIRLMWLSRREGRGKLGLRLGCH*CSNTVG
Trigger: CCCCACAGTGTTGCTGCATCAGTGACAGCCAAGTCT...CAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp ACTGTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGTGTCCGCAGGCGGGCTaGGATTTGGCGCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: TVSWLLRMCLRRLLGVWKCPQAG*DLAHRG
Trigger: CCCTCTATGCGCCAAATCTCAGCCCGCCTGCGGACA...CTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGTGTCCGCAGGCGGGCTaGGATTTGGCGCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVCPQAG*DLAHRG
Trigger: CCCTCTATGCGCCAAATCTCAGCCCGCCTGCGGACA...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCTGGCACTGCCCGAAGTaGGGCCATGTTTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASWHCPK*GHVWER
Trigger: CCTCTCCCAAACATGGCCTCACTTCGGGCAGTGCCA...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAATGGCACTGCCCGAAGTaGGGCCATGTTTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEWHCPK*GHVWER
Trigger: CCTCTCCCAAACATGGCCTCACTTCGGGCAGTGCCA...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp ACTGTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGGCACTCAGGGCACTTaGAGACGCCCACCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: TVSWLLRMCLRRLLGVWKGTQGT*RRPPAS
Trigger: AGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCC...CTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGGAGGAGGGGCAAGGTaGTCAAGGGCCCTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAGGGAR*SRALAK
Trigger: TTTGGCGAGGGCCCTTGATCACCTTGCCCCTCCTCC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGGAGGAGGGGCAAGGTaGTCAAGGGCCCTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHGGGAR*SRALAK
Trigger: TTTGGCGAGGGCCCTTGATCACCTTGCCCCTCCTCC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAGGGGCTGCAAACCACTaGCAAGCTGGCAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEGAANH*QAGSLS
Trigger: TGACAGGCTGCCAGCTTGTCAGTGGTTTGCAGCCCC...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCACACTGCCGGCCAGACGGTGAGCCTTTaGTGCTGCTGTCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: GCVCAGCWGCGRTVHTAGQTVSL*CCCHCR
Trigger: TCTGCAGTGACAGCAGCAGCAAAGGCTCACCGTCTG...GCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACCCCGGGGCCCAGAACTaGAGCTGGGAGATGACGAGT +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHPGAQN*SWEMTS
Trigger: ACTCGTCATCTCCCAGCTGCAGTTCTGGGCCCCGGG...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAGGTGGGCACAGAAACTaGACTGGTTGGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPGGHRN*TGWAAA
Trigger: TGCTGCTGCCCAACCAGTGCAGTTTCTGTGCCCACC...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACGTAGGGGGACTTGTGTaGATGAATCCGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHVGGLV*MNPLVG
Trigger: GCCCACCAGCGGATTCATGCACACAAGTCCCCCTAC...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTTGGGGCTGTCCTCTGTaGAGTACCCGCAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: HEQEWALRALEDAHLRLAWGCPL*STRRCR
Trigger: TCTACACCTGCGGGTACTGCACAGAGGACAGCCCCA...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GCAGCCACACTAGTGGCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGGGTTTCTGATGCCATaGATAAGGCTGATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: AATLVAGGSVGTREPGRLGFLMP*IRLMWL
Trigger: GAGCCACATCAGCCTTATGCATGGCATCAGAAACCC...AAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCACTGCCATCTCCGCTaGCGCCGCCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVHCHLR*RRLLFL
Trigger: GAGGAAGAGGAGGCGGCGGCAGCGGAGATGGCAGTG...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCACCTCCACACAGCCTaGTCCTCGTGCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVHLHTA*SSCLGG
Trigger: CCCACCCAAGCACGAGGAGCAGGCTGTGTGGAGGTG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCATCTGGATGGCCTCCTTaGCATCAAGGCTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPSGWPP*HQGWWG
Trigger: ACCCCACCAGCCTTGATGCCAAGGAGGCCATCCAGA...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCACACTGGGTGTCTGGATaGCCTCCTTGGCATCAAGGC +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPHWVSG*PPWHQG
Trigger: GCCTTGATGCCAAGGAGGCCATCCAGACACCCAGTG...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTCACTGGGTGTCTGGATaGCCTCCTTGGCATCAAGGC +
Preference number: 4 (lower is better)
Translates to: HEQEWALRALEDAHLRLAHWVSG*PPWHQG
Trigger: GCCTTGATGCCAAGGAGGCCATCCAGACACCCAGTG...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACCACTGGGTGTCTGGATaGCCTCCTTGGCATCAAGGC +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHHWVSG*PPWHQG
Trigger: GCCTTGATGCCAAGGAGGCCATCCAGACACCCAGTG...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGAAGACTGGAGGGCACCCAAGAGGGGGTaGGAAATAACTGTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: VGTREPGRLEDVSAEDWRAPKRG*EITVRV
Trigger: CACTCTGACAGTTATTTCCCACCCCCTCTTGGGTGC...CCTCCAGTCTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAACCTTTCCTGGCCCCCTaGGGGCTCCCTGAATTTGTG +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEPFLAP*GLPEFV
Trigger: CACAAATTCAGGGAGCCCCCAGGGGGCCAGGAAAGG...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGAGATGACGAGTCACTaGCCTTTGTCATGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: AGGSVGTREPGRLEDVSAEMTSH*PLSCSR
Trigger: ACGAGAGCATGACAAAGGCCAGTGACTCGTCATCTC...AGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CAGCTCGTCCACATTTCGGGGAACACCGTGGGTGCTCTTGACGTGTTGCATCAACTTTGGGCAGGAGGTTaGCAGGGGCCAGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: QLVHISGNTVGALDVLHQLWAGG*QGPGWM
Trigger: CATCCACCCTGGCCCCTGCCAACCTCCTGCCCAAAG...TTGATGCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGCCAAGTGCACGGCTTTaGGCAGGAGGTTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLPSARL*AGGWQG
Trigger: CCCCTGCCAACCTCCTGCCCAAAGCCGTGCACTTGG...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACGGACGAGGTTCAGGTTaGCCAAGTGCACGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHGRGSG*PSARLW
Trigger: CCAAAGCCGTGCACTTGGCCAACCTGAACCTCGTCC...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACAGAGGGGCACGGGGTTaGAGCTGTGAAGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHRGARG*SCEGPC
Trigger: ACAAGGTCCTTCACAGCTCCAACCCCGTGCCCCTCT...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGAGGCGGGCTGAGATTTaGCGCATAGAGGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVRRAEI*RIEGHG
Trigger: CCCGTGCCCCTCTATGCGCCAAATCTCAGCCCGCCT...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ACTGTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGAGGGTCTGGGTAGAGTaGCAAGGCTGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TVSWLLRMCLRRLLGVWKRVWVE*QGWRRG
Trigger: CCCCCTCCTCCAGCCTTGCCACTCTACCCAGACCCT...CTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAGTGTCCGCTGAAGACTaGAGGCTTGACAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPVSAED*RLDSSS
Trigger: GGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACAC...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGTGGCTGGTGGCTCAGTaGGAACTCGAGAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVWLVAQ*ELESQG
Trigger: GCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCA...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGATGTGTCCGCTGAAGACTGGAGGCTTGACAGCTCGTCCACATTTCGGGGAATGGCTGGTGGCTCAGTaGGAACTCGAGAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RMCPLKTGGLTARPHFGEWLVAQ*ELESQG
Trigger: GCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCA...TTCCCCGAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACACATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACAGCCACACTAGTGGCTaGTGGCTCAGTGGGAACTCG +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHSHTSG*WLSGNS
Trigger: CGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCT...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCACCCGGAGCCCTCCTCTaGCTCTGCCACCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPPGALL*LCHLHC
Trigger: GCAGTGGAGGTGGCAGAGCCAGAGGAGGGCTCCGGG...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGGGGGAGGCAGGGAAGTaGCAGCCTTGCCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVGEAGK*QPCQEE
Trigger: CTCTTCCTGGCAAGGCTGCCACTTCCCTGCCTCCCC...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGGGGAGGCAGGGAAGTaGCAGCCTTGCCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHGEAGK*QPCQEE
Trigger: CTCTTCCTGGCAAGGCTGCCACTTCCCTGCCTCCCC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAGCATCCGGATCCTTGTaGGGTTCCACTGTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPASGSL*GSTVFC
Trigger: GCAGAACACAGTGGAACCTCACAAGGATCCGGATGC...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAGAGGACAGCTTGGAATaGGCTGGCTTTAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPEDSLE*AGFRRC
Trigger: GCAGCGTCTAAAGCCAGCTCATTCCAAGCTGTCCTC...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GCACTTGAAGACGCCCACCTGCGTCTTGCTGACATTCTGGTAAAAATGCTGCTGCCCCTGGGGGCTCCCTaGATTTGTGCCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ALEDAHLRLADILVKMLLPLGAP*ICACLR
Trigger: CCTGAGGCAGGCACAAATTCAGGGAGCCCCCAGGGG...CAGCAGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGGGGACTTGTGTGCATaGATCCGCTGGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHGDLCA*IRWWAQ
Trigger: CTGTGCCCACCAGCGGATTCATGCACACAAGTCCCC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGGGGCTGCAAACCACTaGCAAGCTGGCAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAGAANH*QAGSLS
Trigger: TGACAGGCTGCCAGCTTGTCAGTGGTTTGCAGCCCC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTAGGCCCTCCTTGGGGTaGCAAGGCACAGATGGACTC +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKARPSLG*QGTDGL
Trigger: GAGTCCATCTGTGCCTTGTCACCCCAAGGAGGGCCT...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCTTTGCTCGTGTTCCTaGTGGCTCCCCAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVLCSCS*WLPKGR
Trigger: CCTGCCCTTGGGGAGCCAGCAGGAACACGAGCAAAG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGTCGGTTCCACTGTGTTCTaGCCACTTTGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: HKADVALQKGGPRKAGAVGSTVF*PLCSCS
Trigger: GGAACACGAGCAAAGTGGGCAGAACACAGTGGAACC...GACAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCACAAGGCCACCAAGGCTaGCACACAAGAGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPQGHQG*HTRGQL
Trigger: AAGCTGTCCTCTTGTGTGGCAGCCTTGGTGGCCTTG...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCACAGACGGTGAGCCTTTaGTGCTGCTGTCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPQTVSL*CCCHCR
Trigger: TCTGCAGTGACAGCAGCAGCAAAGGCTCACCGTCTG...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACTGCTCTGTTGCTTCTTaGCTGTCTGTGAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHCSVAS*LSVSLG
Trigger: CCCCAGGCTCACAGACAGGCAAGAAGCAACAGAGCA...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGGGTGGATGCCTGCAGTaGTGTGCTCTGTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: CIRLMWLSRREGRGKLGLGGCLQ*CALLLL
Trigger: AAGAAGCAACAGAGCACAGCACTGCAGGCATCCACC...CAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp ACTGTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGCCAGGGTGGATGCCTaGAGTGCTGTGCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TVSWLLRMCLRRLLGVWKARVDA*SAVLCC
Trigger: GCAACAGAGCACAGCACTGCAGGCATCCACCCTGGC...CTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAATTCAGGTTGGCCAAGTaGACGGCTTTGGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEFRLAK*TALGRR
Trigger: CCTCCTGCCCAAAGCCGTGCACTTGGCCAACCTGAA...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCTTCAGGTTGGCCAAGTaGACGGCTTTGGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASFRLAK*TALGRR
Trigger: CCTCCTGCCCAAAGCCGTGCACTTGGCCAACCTGAA...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTGGCTGGCTCCGTCTTTaGACTGAAGACTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: HEQEWALRALEDAHLRLAGWLRL*TEDLAV
Trigger: GACAGCCAAGTCTTCAGTGCAAAGACGGAGCCAGCC...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGTAGGGGGACTTGTGTaGATGAATCCGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASVGGLV*MNPLVG
Trigger: GCCCACCAGCGGATTCATGCACACAAGTCCCCCTAC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAACCTGTAGCCCACCTTaGGGGCATAGTGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPTCSPP*GHSAGN
Trigger: ATTGCCTGCACTATGCCCGCAAGGTGGGCTACAGGT...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ATGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTAAGGACTGTTCACACTaGCGGCATGGGTACCGCTTC +
Preference number: 4 (lower is better)
Translates to: MHKADVALQKGGPRKAGAKDCSH*RHGYRF
Trigger: GAAGCGGTACCCATGCCGGCAGTGTGAACAGTCCTT...AGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACTGTTGCGGATGTGTTTaGGCAGGCTGTTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHCCGCV*AGCWGC
Trigger: ACACCCCCAACAGCCTGCGCAAACACATCCGCAACA...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCTGGGGCTGTCCTCTGTaGAGTACCCGCAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASWGCPL*STRRCR
Trigger: TCTACACCTGCGGGTACTGCACAGAGGACAGCCCCA...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAAAGGCTGGTGGGGTCTaGGATGTCAAAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEKAGGV*DVKGSQ
Trigger: CTGGCTGCCTTTGACATCCCAGACCCCACCAGCCTT...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCACCTTGGCATCAAGGCTaGTGGGGTCTGGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPPWHQG*WGLGCQ
Trigger: TTGACATCCCAGACCCCACCAGCCTTGATGCCAAGG...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAATCTGGATGGCCTCCTTaGCATCAAGGCTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGESGWPP*HQGWWG
Trigger: ACCCCACCAGCCTTGATGCCAAGGAGGCCATCCAGA...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GCAGCCACACTAGTGGCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGACTCTTTGGTGACTTaGGCATTTTGGGGCTACCTT +
Preference number: 4 (lower is better)
Translates to: AATLVAGGSVGTREPGRLDSLVT*AFWGYL
Trigger: AAGGTAGCCCCAAAATGCCCAAGTCACCAAAGAGTC...AAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTTTGCTGGTGGGGAGCTaGCAGCCACAGACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVLLVGS*QPQTVS
Trigger: GCTCACCGTCTGTGGCTGCCAGCTCCCCACCAGCAA...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CAGCTCGTCCACATTTCGGGGAACACCGTGGGTGCTCTTGACGTGTTGCATCAACCTTTCCTGGCCCCCTaGGGGCTCCCTGAATTTGTG +
Preference number: 4 (lower is better)
Translates to: QLVHISGNTVGALDVLHQPFLAP*GLPEFV
Trigger: CACAAATTCAGGGAGCCCCCAGGGGGCCAGGAAAGG...TTGATGCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGCCCAGAACTGCAGCTaGGAGATGACGAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASAQNCS*EMTSHW
Trigger: CCAGTGACTCGTCATCTCCCAGCTGCAGTTCTGGGC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTGATGCAGCAACACTGTaGGGGACGAGGTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: HEQEWALRALEDAHLRLADAATL*GTRFRL
Trigger: CAACCTGAACCTCGTCCCCCACAGTGTTGCTGCATC...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAGATGCAGCAACACTGTaGGGGACGAGGTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPDAATL*GTRFRL
Trigger: CAACCTGAACCTCGTCCCCCACAGTGTTGCTGCATC...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAACCACTGGCCGGCACGTaGATCCTGCTGTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQPLAGT*ILLSAG
Trigger: GCCTGCGGACAGCAGGATCCACGTGCCGGCCAGTGG...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCACACTGCCGGCTGGCAGTGTCGCTCCTaGATGTGGCTTTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GCVCAGCWGCGRTVHTAGWQCRS*MWLFSK
Trigger: CTTGCTGAAAAGCCACATCCAGGAGCGACACTGCCA...GCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACCACACTAGTGGCTGGTaGCTCAGTGGGAACTCGAGA +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHHTSGW*LSGNSR
Trigger: TCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTG...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCACTCCTGGCACTCCTaGCAGGTCCAGCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVHSWHS*QVQPVF
Trigger: GAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGATGTGTCCGCTGAAGACTGGAGGCTTGACAGCTCGTCCACATTTCGGGGAATCTGGAACCCACTCCTaGCACTCCTGGCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RMCPLKTGGLTARPHFGESGTHS*HSWQVQ
Trigger: CTGGACCTGCCAGGAGTGCCAGGAGTGGGTTCCAGA...TTCCCCGAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACACATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp TGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTTCCACCCTGCGGTGGTTCTTTACTGTGTCATaGTTGTTGCGGATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: WQVQPVFLSRGLASTLRWFFTVS*LLRMCL
Trigger: CAAACACATCCGCAACAACCATGACACAGTAAAGAA...CCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCACCTGCTCCTCGTGCTTaGGTGGGCCCTGACTCCACC +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPPAPRA*VGPDST
Trigger: GGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAGG...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGTCCACTACATCCTGCTaGGCGCAACCCCATGCCACC +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVSTTSC*AQPHAT
Trigger: GGTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGA...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CAGCTCGTCCACATTTCGGGGAACACCGTGGGTGCTCTTGACGTGTTGCATCAACTGGCAAGGGCTGACTaGTATCCGTGGCAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: QLVHISGNTVGALDVLHQLARAD*YPWQVG
Trigger: CCCTACCTGCCACGGATACCAGTCAGCCCTTGCCAG...TTGATGCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACCTGGCAAGGGCTGACTaGTATCCGTGGCAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHLARAD*YPWQVG
Trigger: CCCTACCTGCCACGGATACCAGTCAGCCCTTGCCAG...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560079.7
3UTR CAA 72 bp GAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTaGGGTGGAATAGGGTGGGGCCAGGCTCACTTGGAG +
Preference number: 4 (lower is better)
Translates to: EMGQTGEVWERP*GGIGWGQAHLE
Trigger: CTCCAAGTGAGCCTGGCCCCACCCTATTCCACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CAA 72 bp GGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTaGAAGACGCCCACCTGCGTCTTGCTGACATTCTGG +
Preference number: 4 (lower is better)
Translates to: GFCTNKSGHSGH*KTPTCVLLTFW
Trigger: CCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACTTTCTCCGCTTCAAATaGCTCCTGGCGGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHFLRFK*LLAAGV
Trigger: AACACCAGCCGCCAGGAGTCATTTGAAGCGGAGAAA...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GCAGCCACACTAGTGGCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTCAAATCCGTTATCTTTaGTGGGATCCTCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: AATLVAGGSVGTREPGRLQIRYL*WDPQVL
Trigger: CAGAACCTGAGGATCCCATCAAAGATAACGGATTTG...AAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCCTCTTTAGTGGGCCCTaGGAGATCCTTTGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASLFSGP*EILCVA
Trigger: GGCCACACAAAGGATCTCTCAGGGCCCACTAAAGAG...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCAGACTTGGCTGTCACTaGTGCAGCAACACTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASRLGCH*CSNTVG
Trigger: CCCCACAGTGTTGCTGCATCAGTGACAGCCAAGTCT...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGCACTCAGGGCACTTaGAGACGCCCACCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPGTQGT*RRPPAS
Trigger: AGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCC...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGAGCTACCACTGTGTCTaGGCAGGAAGGGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVSYHCV*AGRDPA
Trigger: GGCTGGATCCCTTCCTGCTCAGACACAGTGGTAGCT...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTCATGTGGGACACGTAGCCTTTGCTCGTGTTCCTaGTGGCTCCCCAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: MGTASMSDRGSFSCGTRSLCSCS*WLPKGR
Trigger: CCTGCCCTTGGGGAGCCAGCAGGAACACGAGCAAAG...GCTACGTGTCCCACATGAAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAGTGAGCCTTTGCTGCTaGTGTCACTGCAGATGCTAC +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPVSLCC*CHCRCY
Trigger: GTAGCATCTGCAGTGACAGCAGCAGCAAAGGCTCAC...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCCCTGCCTCAGGAAAGTaGTCTTCCACAGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASPASGK*SSTGTS
Trigger: TGAGGTGCCTGTGGAAGAGCACTTTCCTGAGGCAGG...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACGGTGGATGCCTGCAGTaGTGTGCTCTGTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHGGCLQ*CALLLL
Trigger: AAGAAGCAACAGAGCACAGCACTGCAGGCATCCACC...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ACTGTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGTTCAGGTTGGCCAAGTaGACGGCTTTGGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TVSWLLRMCLRRLLGVWKFRLAK*TALGRR
Trigger: CCTCCTGCCCAAAGCCGTGCACTTGGCCAACCTGAA...CTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTAGCAGCTGGGAACACTaGATGACGAGCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFSSWEH*MTSPLL
Trigger: GAGCAAGGGGCTCGTCATGCAGTGTTCCCAGCTGCT...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp ATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCGTAGGGGGACTTGTGTaGATGAATCCGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: MVVADVFAQAVGGVEGLFVGGLV*MNPLVG
Trigger: GCCCACCAGCGGATTCATGCACACAAGTCCCCCTAC...GAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAATCAACTCCGGCTTCTaGACGAACAAGAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPINSGF*TNKSGH
Trigger: GTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGAT...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACGTGCTCTTGACGTGTTaGATCAACTCCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHVLLTC*INSGFC
Trigger: GCAGAAGCCGGAGTTGATGCAACACGTCAAGAGCAC...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACCTGTGTCATGGTTGTTaGGGATGTGTTTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHLCHGC*GCVCAG
Trigger: GCCTGCGCAAACACATCCGCAACAACCATGACACAG...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGTGGGGCTGTCCTCTGTaGAGTACCCGCAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVWGCPL*STRRCR
Trigger: TCTACACCTGCGGGTACTGCACAGAGGACAGCCCCA...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGAAACAGGCCTGGGTTaGCCCACTGCCAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPETGLG*PTASWG
Trigger: TCCCCAGCTGGCAGTGGGGCAACCCAGGCCTGTTTC...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGAAGGCTGGTGGGGTCTaGGATGTCAAAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLKAGGV*DVKGSQ
Trigger: CTGGCTGCCTTTGACATCCCAGACCCCACCAGCCTT...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCCCTTGGCATCAAGGCTaGTGGGGTCTGGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASPWHQG*WGLGCQ
Trigger: TTGACATCCCAGACCCCACCAGCCTTGATGCCAAGG...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGATGTGTCCGCTGAAGACTGGAGGCTTGACAGCTCGTCCACATTTCGGGGAATCTGGATGGCCTCCTTaGCATCAAGGCTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RMCPLKTGGLTARPHFGESGWPP*HQGWWG
Trigger: ACCCCACCAGCCTTGATGCCAAGGAGGCCATCCAGA...TTCCCCGAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACACATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGAAGACTGGAGGGAGATTGGACTGAACTaGTTGAAGGTGGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: VGTREPGRLEDVSAEDWREIGLN*LKVGNG
Trigger: GCCATTACCCACCTTCAACCAGTTCAGTCCAATCTC...CCTCCAGTCTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GACGTGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCATTTGGGAATTGCTGGTaGGGAGCTGGCAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: DVLHQLRLLHEQEWALRAFGNCW*GAGSHR
Trigger: TCTGTGGCTGCCAGCTCCCCACCAGCAATTCCCAAA...TGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAATTTGGGAATTGCTGGTaGGGAGCTGGCAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEFGNCW*GAGSHR
Trigger: TCTGTGGCTGCCAGCTCCCCACCAGCAATTCCCAAA...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGGGACGAGGTTCAGGTTaGCCAAGTGCACGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLGRGSG*PSARLW
Trigger: CCAAAGCCGTGCACTTGGCCAACCTGAACCTCGTCC...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GCACTTGAAGACGCCCACCTGCGTCTTGCTGACATTCTGGTAAAAATGCTGCTGAGGCGGGCTGAGATTTaGCGCATAGAGGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: ALEDAHLRLADILVKMLLRRAEI*RIEGHG
Trigger: CCCGTGCCCCTCTATGCGCCAAATCTCAGCCCGCCT...CAGCAGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAAGGCGGGCTGAGATTTaGCGCATAGAGGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPRRAEI*RIEGHG
Trigger: CCCGTGCCCCTCTATGCGCCAAATCTCAGCCCGCCT...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCGGCTTCACCAGCAGCTaGGAACACTGCATGACGAGC +
Preference number: 4 (lower is better)
Translates to: MVVADVFAQAVGGVEGLFGFTSS*EHCMTS
Trigger: GCTCGTCATGCAGTGTTCCCAGCTGCTGGTGAAGCC...GAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCATGGCAGTGTCGCTCCTaGATGTGGCTTTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPWQCRS*MWLFSK
Trigger: CTTGCTGAAAAGCCACATCCAGGAGCGACACTGCCA...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCTTTCGGGGAACACCGTaGGTGCTCTTGACGTGTTGC +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASFRGTP*VLLTCC
Trigger: GCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAA...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCGTGTCCGCTGAAGACTaGAGGCTTGACAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: MVVADVFAQAVGGVEGLFVSAED*RLDSSS
Trigger: GGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACAC...GAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTTCTGGAACCCACTCCTaGCACTCCTGGCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVSGTHS*HSWQVQ
Trigger: CTGGACCTGCCAGGAGTGCCAGGAGTGGGTTCCAGA...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGGCTTTGCAGGTAGCTaGAAACAGGCCTGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHGFAGS*KQAWVA
Trigger: GGCAACCCAGGCCTGTTTCCAGCTACCTGCAAAGCC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CAGCTCGTCCACATTTCGGGGAACACCGTGGGTGCTCTTGACGTGTTGCATCAACATATCCCCCATGGCTaGATGCTGGCAAGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: QLVHISGNTVGALDVLHQHIPHG*MLARAD
Trigger: GTCAGCCCTTGCCAGCATCCAGCCATGGGGGATATG...TTGATGCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
3UTR CAA 72 bp AGACCCTTGGGTGGAATAGGGTGGGGCCAGGCTCACTaGGAGAGGAATACAAGAGCCTACCTGCATGGTGAG +
Preference number: 4 (lower is better)
Translates to: RPLGGIGWGQAH*ERNTRAYLHGE
Trigger: CTCACCATGCAGGTAGGCTCTTGTATTCCTCTCCAAGTGAGCCTGGCCCCACCCTATTCCACCCAAGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CAA 72 bp GTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTaGGGGGTGTGGAAGGACTGTTCACACTGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: VSWLLRMCLRRL*GVWKDCSHCRH
Trigger: ATGCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTTTTGTGTGGCCAGGCTaGTCCTCCTTAGTGACACTA +
Preference number: 4 (lower is better)
Translates to: HEQEWALRALEDAHLRLAFVWPG*SSLVTL
Trigger: TAGTGTCACTAAGGAGGATCAGCCTGGCCACACAAA...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp CAGCTCGTCCACATTTCGGGGAACACCGTGGGTGCTCTTGACGTGTTGCATCAACTCTTTAGTGGGCCCTaGGAGATCCTTTGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: QLVHISGNTVGALDVLHQLFSGP*EILCVA
Trigger: GGCCACACAAAGGATCTCTCAGGGCCCACTAAAGAG...TTGATGCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCTCTTTAGTGGGCCCTaGGAGATCCTTTGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVLFSGP*EILCVA
Trigger: GGCCACACAAAGGATCTCTCAGGGCCCACTAAAGAG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGACTGCAGCTGGGAGATaGCGAGTCACTGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVTAAGR*RVTGLC
Trigger: ACAAAGGCCAGTGACTCGTCATCTCCCAGCTGCAGT...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAATGTCCGCAGGCGGGCTaGGATTTGGCGCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQCPQAG*DLAHRG
Trigger: CCCTCTATGCGCCAAATCTCAGCCCGCCTGCGGACA...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACTGCCTCCTTGAAAGATaGCCTCTAAGCACCCGGCCA +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHCLLER*PLSTRP
Trigger: TGGCCGGGTGCTTAGAGGTCATCTTTCAAGGAGGCA...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGTGGAACCCATTCCTGTaGATGGACCCAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVWNPFL*MDPGYR
Trigger: CCTGTACCCTGGGTCCATTCACAGGAATGGGTTCCA...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGAAATGTCAACGGTGTaGTGCTCGAGGCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHEMSTV*CSRPSL
Trigger: CAAGGAGGGCCTCGAGCATCACACCGTTGACATTTC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACGGGAAGGCAAAGTGTTaGGCTTACTGGGCCACAATT +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHGKAKC*AYWATI
Trigger: AATTGTGGCCCAGTAAGCTCAACACTTTGCCTTCCC...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAGGTCAGATCAGACCCTaGGAGAACAGCTGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEGQIRP*ENSCSY
Trigger: GTAGCTACAGCTGTTCTCTCAGGGTCTGATCTGACC...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAGGTTCCACTGTGTTCTaGCCACTTTGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEGSTVF*PLCSCS
Trigger: GGAACACGAGCAAAGTGGGCAGAACACAGTGGAACC...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCAAGGCCACCAAGGCTaGCACACAAGAGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVQGHQG*HTRGQL
Trigger: AAGCTGTCCTCTTGTGTGGCAGCCTTGGTGGCCTTG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CAGCTCGTCCACATTTCGGGGAACACCGTGGGTGCTCTTGACGTGTTGCATCAATGCTGCTGCTGTCACTaGAGATGCTACGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QLVHISGNTVGALDVLHQCCCCH*RCYEGC
Trigger: ACAGCCCTCGTAGCATCTGCAGTGACAGCAGCAGCA...TTGATGCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAGTGAGCCTTTGCTGCTaGTGTCACTGCAGATGCTAC +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEVSLCC*CHCRCY
Trigger: GTAGCATCTGCAGTGACAGCAGCAGCAAAGGCTCAC...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCAGACGGTGAGCCTTTaGTGCTGCTGTCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVQTVSL*CCCHCR
Trigger: TCTGCAGTGACAGCAGCAGCAAAGGCTCACCGTCTG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGGCTCCCTGAATTTGTaGCTGCCTCAGGAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASGSLNL*LPQESA
Trigger: AGCACTTTCCTGAGGCAGGCACAAATTCAGGGAGCC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACCACTGGCCTTTGTCATaGTCTCGTCCCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHHWPLS*SRPLSW
Trigger: CCAGGAAAGGGGACGAGAGCATGACAAAGGCCAGTG...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCCACTGGCCTTTGTCATaGTCTCGTCCCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: MVVADVFAQAVGGVEGLFHWPLS*SRPLSW
Trigger: CCAGGAAAGGGGACGAGAGCATGACAAAGGCCAGTG...GAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCACTGGCCTTTGTCATaGTCTCGTCCCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVHWPLS*SRPLSW
Trigger: CCAGGAAAGGGGACGAGAGCATGACAAAGGCCAGTG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGTGCTCTGTTGCTTCTTaGCTGTCTGTGAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLCSVAS*LSVSLG
Trigger: CCCCAGGCTCACAGACAGGCAAGAAGCAACAGAGCA...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCACACTGCCGGCTCTTGGAGCACAGTGTaGACAGTACCTCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: GCVCAGCWGCGRTVHTAGSWSTV*TVPQCG
Trigger: TCCACATTGAGGTACTGTGCACACTGTGCTCCAAGA...GCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTTGTCCTCTGGAAATGTaGAGCCAGGACCATGTAGTC +
Preference number: 4 (lower is better)
Translates to: HEQEWALRALEDAHLRLACPLEM*SQDHVV
Trigger: GACTACATGGTCCTGGCTGCACATTTCCAGAGGACA...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTGGTGGCACTGTGGTCTaGAGTGCTGCTGGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVGGTVV*SAAGSL
Trigger: AAGACTGCCAGCAGCACTGCAGACCACAGTGCCACC...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGTGCTCTTGACGTGTTaGATCAACTCCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASVLLTC*INSGFC
Trigger: GCAGAAGCCGGAGTTGATGCAACACGTCAAGAGCAC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTTGTTGCGGATGTGTTTaGGCAGGCTGTTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFCCGCV*AGCWGC
Trigger: ACACCCCCAACAGCCTGCGCAAACACATCCGCAACA...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp TTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCACACTGCCTGTGTCATGGTTGTTaGGGATGTGTTTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRMCLRRLLGVWKDCSHCLCHGC*GCVCAG
Trigger: GCCTGCGCAAACACATCCGCAACAACCATGACACAG...GCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAACTGTGTCATGGTTGTTaGGGATGTGTTTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGELCHGC*GCVCAG
Trigger: GCCTGCGCAAACACATCCGCAACAACCATGACACAG...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACGGGTTTCTGATGCCATaGATAAGGCTGATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHGFLMP*IRLMWL
Trigger: GAGCCACATCAGCCTTATGCATGGCATCAGAAACCC...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAACAGCAGACAAAATGTaGTCCACCCTCCATGCCCTA +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPTADKM*STLHAL
Trigger: TAGGGCATGGAGGGTGGAGCACATTTTGTCTGCTGT...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGGCAGGGCACCCCAACTaGATGGGAAGTAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVAGHPN*MGSRKA
Trigger: TGCTTTCCTACTTCCCATGCAGTTGGGGTGCCCTGC...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGCAGGGCACCCCAACTaGATGGGAAGTAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAAGHPN*MGSRKA
Trigger: TGCTTTCCTACTTCCCATGCAGTTGGGGTGCCCTGC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGTGGCATCAAGGCTGGTaGGGTCTGGGATGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLWHQGW*GLGCQR
Trigger: CCTTTGACATCCCAGACCCCACCAGCCTTGATGCCA...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGCCTTGGCATCAAGGCTaGTGGGGTCTGGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLPWHQG*WGLGCQ
Trigger: TTGACATCCCAGACCCCACCAGCCTTGATGCCAAGG...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp ATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCTCCTCACTGGGTGTCTaGATGGCCTCCTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: MVVADVFAQAVGGVEGLFSSLGV*MASLAS
Trigger: TGATGCCAAGGAGGCCATCCAGACACCCAGTGAGGA...GAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCTCACTGGGTGTCTaGATGGCCTCCTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKASSLGV*MASLAS
Trigger: TGATGCCAAGGAGGCCATCCAGACACCCAGTGAGGA...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GACGTGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCATCTCATTCTCCTCACTaGGTGTCTGGATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: DVLHQLRLLHEQEWALRASHSPH*VSGWPP
Trigger: AGGAGGCCATCCAGACACCCAGTGAGGAGAATGAGA...TGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTGCTTCAAATGACTCCTaGCGGCTGGTGTTCTTGACA +
Preference number: 4 (lower is better)
Translates to: HEQEWALRALEDAHLRLAASNDS*RLVFLT
Trigger: TGTCAAGAACACCAGCCGCCAGGAGTCATTTGAAGC...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAGCACCCAAGAGGGGGTaGGAAATAACTGTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEAPKRG*EITVRV
Trigger: CACTCTGACAGTTATTTCCCACCCCCTCTTGGGTGC...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGATGCAGCAACACTGTaGGGGACGAGGTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKADAATL*GTRFRL
Trigger: CAACCTGAACCTCGTCCCCCACAGTGTTGCTGCATC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGCAGCCTTTTTCACCTaGTGGACCAGGGGCACCGAC +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPAAFFT*WTRGTD
Trigger: GTCGGTGCCCCTGGTCCACCAGGTGAAAAAGGCTGC...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAAGAAGAGCAGCGTCTTaGAGCACAGTGTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPRRAAS*STVCTV
Trigger: TACTGTGCACACTGTGCTCCAAGACGCTGCTCTTCT...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAAAGGGTCTGGGTAGAGTaGCAAGGCTGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQRVWVE*QGWRRG
Trigger: CCCCCTCCTCCAGCCTTGCCACTCTACCCAGACCCT...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGAGCATTTGGCATACCTaGCAGGTCAGCCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVSIWHT*QVSPSV
Trigger: GACAGAGGGGCTGACCTGCCAGGTATGCCAAATGCT...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ACTGTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGAAGGCCAAGGTCAGGTaGACGACACCACAGTGGATG +
Preference number: 4 (lower is better)
Translates to: TVSWLLRMCLRRLLGVWKKAKVR*TTPQWM
Trigger: CATCCACTGTGGTGTCGTCCACCTGACCTTGGCCTT...CTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCTGTCGCTCCTGGATGTaGCTTTTCAGCAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASCRSWM*LFSKAK
Trigger: CTTGGCCTTGCTGAAAAGCCACATCCAGGAGCGACA...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTCATTTGTGGAAAACCTaGCAGTGTCGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: HEQEWALRALEDAHLRLAHLWKT*QCRSWM
Trigger: CATCCAGGAGCGACACTGCCAGGTTTTCCACAAATG...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAACTGCACGAACAAGAGTaGGCACTCAGGGCACTTGAA +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGELHEQE*ALRALE
Trigger: TTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAG...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGTTTCGGGGAACACCGTaGGTGCTCTTGACGTGTTGC +
Preference number: 4 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLFRGTP*VLLTCC
Trigger: GCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAA...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCACACTAGTGGCTGGTaGCTCAGTGGGAACTCGAGA +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVHTSGW*LSGNSR
Trigger: TCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGCACACTAGTGGCTGGTaGCTCAGTGGGAACTCGAGA +
Preference number: 4 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLHTSGW*LSGNSR
Trigger: TCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTG...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTGTAGCTCTCCCGATCTaGAACCCACTCCTGGCACTC +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVVALPI*NPLLAL
Trigger: GAGTGCCAGGAGTGGGTTCCAGATCGGGAGAGCTAC...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGTTCACACTGCCGGCATaGGTACCGCTTCAATGTCCG +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVFTLPA*VPLQCP
Trigger: CGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAA...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTTCACACTGCCGGCATaGGTACCGCTTCAATGTCCG +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAFTLPA*VPLQCP
Trigger: CGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAA...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTAGGCTGTTGGGGGTGTaGAAGGACTGTTCACACTGC +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKARLLGV*KDCSHC
Trigger: GCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCT...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGGTTTGCGCAGGCTGTTaGGGGTGTGGAAGGACTGTT +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVVCAGC*GCGRTV
Trigger: AACAGTCCTTCCACACCCCCAACAGCCTGCGCAAAC...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGATGTGTCCGCTGAAGACTGGAGGCTTGACAGCTCGTCCACATTTCGGGGAAGTTTGCGCAGGCTGTTaGGGGTGTGGAAGGACTGTT +
Preference number: 4 (lower is better)
Translates to: RMCPLKTGGLTARPHFGEVCAGC*GCGRTV
Trigger: AACAGTCCTTCCACACCCCCAACAGCCTGCGCAAAC...TTCCCCGAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACACATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGTTTGCGCAGGCTGTTaGGGGTGTGGAAGGACTGTT +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAVCAGC*GCGRTV
Trigger: AACAGTCCTTCCACACCCCCAACAGCCTGCGCAAAC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCTGCATAAGGCTGATGTaGCTCTCCAGAAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: MVVADVFAQAVGGVEGLFCIRLM*LSRREG
Trigger: GCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCA...GAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAAGACCCTTGGGTaGAATAGGGTGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPGKTLG*NRVGPG
Trigger: GCCTGGCCCCACCCTATTCCACCCAAGGGTCTTTCC...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCAACCCCATGCCACCTaGGTTAGAGGTCAGACGACA +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVQPHAT*VRGQTT
Trigger: TGTCGTCTGACCTCTAACCCAGGTGGCATGGGGTTG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACTGGGGTCACGACAGGTaGTCAAACCTGCAATTCTAC +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHWGHDR*SNLQFY
Trigger: GTAGAATTGCAGGTTTGACCACCTGTCGTGACCCCA...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACCTGTCAAAGCAGCCTTaGTCACTAACGAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHLSKQP*SLTSTV
Trigger: CACTGTGCTCGTTAGTGACCAAGGCTGCTTTGACAG...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCTCAAAACAAGGGTGTaGCGAGCGTTGCTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVLKTRV*RALLGE
Trigger: CTCCCCTAGCAACGCTCGCCACACCCTTGTTTTGAG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCATATCCCCCATGGCTaGATGCTGGCAAGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVHIPHG*MLARAD
Trigger: GTCAGCCCTTGCCAGCATCCAGCCATGGGGGATATG...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560079.7
CDS-3UTR TCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAATATGCCTGGAGGTTTaGGGGGACTCTCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEICLEV*GDSHSP
Trigger: AGGAGAATGAGAGTCCCCTCAAACCTCCAGGCATAT...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCACACTGCATATGCCTGGAGGTTTaGGGGGACTCTCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRMCLRRLLGVWKDCSHCICLEV*GDSHSP
Trigger: AGGAGAATGAGAGTCCCCTCAAACCTCCAGGCATAT...GCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTACTGCAGCTGGGAGATaGCGAGTCACTGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVTAAGR*RVTGLC
Trigger: ACAAAGGCCAGTGACTCGTCATCTCCCAGCTGCAGT...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTACGGGGTTGGAGCTGTaGAGGACCTTGTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVTGLEL*RTLLKT
Trigger: GGTCTTCAACAAGGTCCTTCACAGCTCCAACCCCGT...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTAGGAGCACTTATAAATaGGCTGGGAGGGTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKARSTYK*AGRVCG
Trigger: CCCACAGACCCTCCCAGCTCATTTATAAGTGCTCCT...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CAGCTCGTCCACATTTCGGGGAACACCGTGGGTGCTCTTGACGTGTTGCATCAAAGGAGCACTTATAAATaGGCTGGGAGGGTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QLVHISGNTVGALDVLHQRSTYK*AGRVCG
Trigger: CCCACAGACCCTCCCAGCTCATTTATAAGTGCTCCT...TTGATGCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCACCACCTGCGTCTTGCTaGCATTCTGGTAAAAATGCT +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPPPASC*HSGKNA
Trigger: AGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGG...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACGAAACTGCCTGGTGCTaGATATACAGTGGTGAACAG +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHETAWC*IYSGEQ
Trigger: CTGTTCACCACTGTATATTCAGCACCAGGCAGTTTC...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAACTTTGCTCGTGTTCCTaGTGGCTCCCCAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQLCSCS*WLPKGR
Trigger: CCTGCCCTTGGGGAGCCAGCAGGAACACGAGCAAAG...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGGTTCCACTGTGTTCTaGCCACTTTGCTCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAGSTVF*PLCSCS
Trigger: GGAACACGAGCAAAGTGGGCAGAACACAGTGGAACC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTCATGTGGGACACGTAGCTGCTGTCACTGCAGATaGTACGAGGGCTGTCCGATG +
Preference number: 4 (lower is better)
Translates to: MGTASMSDRGSFSCGTRSCCHCR*YEGCPM
Trigger: CATCGGACAGCCCTCGTAGCATCTGCAGTGACAGCA...GCTACGTGTCCCACATGAAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTTGCTGCTGCTGTCACTaGAGATGCTACGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVCCCCH*RCYEGC
Trigger: ACAGCCCTCGTAGCATCTGCAGTGACAGCAGCAGCA...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGGTGAGCCTTTGCTGCTaGTGTCACTGCAGATGCTAC +
Preference number: 4 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLVSLCC*CHCRCY
Trigger: GTAGCATCTGCAGTGACAGCAGCAGCAAAGGCTCAC...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp CAGCTCGTCCACATTTCGGGGAACACCGTGGGTGCTCTTGACGTGTTGCATCAAGGCTCCCTGAATTTGTaGCTGCCTCAGGAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: QLVHISGNTVGALDVLHQGSLNL*LPQESA
Trigger: AGCACTTTCCTGAGGCAGGCACAAATTCAGGGAGCC...TTGATGCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GCACTTGAAGACGCCCACCTGCGTCTTGCTGACATTCTGGTAAAAATGCTGCTGGGTGGCACTGTGGTCTaGAGTGCTGCTGGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ALEDAHLRLADILVKMLLGGTVV*SAAGSL
Trigger: AAGACTGCCAGCAGCACTGCAGACCACAGTGCCACC...CAGCAGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp ACTGTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGTTGAAGACGCCCACCTaGGTCTTGCTGACATTCTGG +
Preference number: 4 (lower is better)
Translates to: TVSWLLRMCLRRLLGVWKLKTPT*VLLTFW
Trigger: CCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAA...CTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGTTGAAGACGCCCACCTaGGTCTTGCTGACATTCTGG +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVLKTPT*VLLTFW
Trigger: CCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAA...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGATCAACTCCGGCTTCTaGACGAACAAGAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLINSGF*TNKSGH
Trigger: GTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGAT...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGGTGCTCTTGACGTGTTaGATCAACTCCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLVLLTC*INSGFC
Trigger: GCAGAAGCCGGAGTTGATGCAACACGTCAAGAGCAC...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCATACTCCACTACATCCTaGTGGGCGCAACCCCATGCC +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPYSTTS*WAQPHA
Trigger: GGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTA...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAACAGCAGACAAAATGTaGTCCACCCTCCATGCCCTA +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGETADKM*STLHAL
Trigger: TAGGGCATGGAGGGTGGAGCACATTTTGTCTGCTGT...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTACAGTGGATGCACCTTaGGGGCATAGTGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFTVDAP*GHSAGN
Trigger: ATTGCCTGCACTATGCCCGCAAGGTGCATCCACTGT...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAAAGGCTGGTGGGGTCTaGGATGTCAAAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPKAGGV*DVKGSQ
Trigger: CTGGCTGCCTTTGACATCCCAGACCCCACCAGCCTT...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGTCTCATTCTCCTCACTaGGTGTCTGGATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVSHSPH*VSGWPP
Trigger: AGGAGGCCATCCAGACACCCAGTGAGGAGAATGAGA...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACATCCATACATATGCCTaGAGGTTTGAGGGGACTCTC +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHIHTYA*RFEGTL
Trigger: GAGAGTCCCCTCAAACCTCCAGGCATATGTATGGAT...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGCTTCAAATGACTCCTaGCGGCTGGTGTTCTTGACA +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASASNDS*RLVFLT
Trigger: TGTCAAGAACACCAGCCGCCAGGAGTCATTTGAAGC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACGAGATTGGACTGAACTaGTTGAAGGTGGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHEIGLN*LKVGNG
Trigger: GCCATTACCCACCTTCAACCAGTTCAGTCCAATCTC...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CAGCTCGTCCACATTTCGGGGAACACCGTGGGTGCTCTTGACGTGTTGCATCAAGGGATCCTCAGGTTCTaGGCTGGAGATTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: QLVHISGNTVGALDVLHQGILRF*AGDWTE
Trigger: TTCAGTCCAATCTCCAGCCCAGAACCTGAGGATCCC...TTGATGCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGGCACCCAAGAGGGGGTaGGAAATAACTGTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVAPKRG*EITVRV
Trigger: CACTCTGACAGTTATTTCCCACCCCCTCTTGGGTGC...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAGACTCTTTGGTGACTTaGGCATTTTGGGGCTACCTT +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPDSLVT*AFWGYL
Trigger: AAGGTAGCCCCAAAATGCCCAAGTCACCAAAGAGTC...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACGACTCTTTGGTGACTTaGGCATTTTGGGGCTACCTT +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHDSLVT*AFWGYL
Trigger: AAGGTAGCCCCAAAATGCCCAAGTCACCAAAGAGTC...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCATGGATCATCAGGATCTaGCAGGATCCTTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPWIIRI*QDPCDS
Trigger: ACTGTCACAAGGATCCTGCCAGATCCTGATGATCCA...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGAGCCCCTTGCTCTTGTaGTCACGGGCGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWSPLLL*SRACRS
Trigger: GCTCCGGCACGCCCGTGACCACAAGAGCAAGGGGCT...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGCTTCACCAGCAGCTaGGAACACTGCATGACGAGC +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPGFTSS*EHCMTS
Trigger: GCTCGTCATGCAGTGTTCCCAGCTGCTGGTGAAGCC...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGATGTGTCCGCTGAAGACTGGAGGCTTGACAGCTCGTCCACATTTCGGGGAAGCCGACACGAACATTTaGTCCGCAGAGATAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RMCPLKTGGLTARPHFGEADTNI*SAEIGF
Trigger: GAAGCCTATCTCTGCGGACCAAATGTTCGTGTCGGC...TTCCCCGAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACACATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGGGGCTGCTGGTGCCGTaGAGTTCACAGGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWGLLVP*SSQGPT
Trigger: TGTCGGCCCCTGTGAACTCCACGGCACCAGCAGCCC...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTAGCATTTGGCATACCTaGCAGGTCAGCCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVSIWHT*QVSPSV
Trigger: GACAGAGGGGCTGACCTGCCAGGTATGCCAAATGCT...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGGCACAGAAACTGCACTaGTTGGGCAGCAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVAQKLH*LGSSIW
Trigger: CCAAATGCTGCTGCCCAACCAGTGCAGTTTCTGTGC...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACTGGCAGTGTCGCTCCTaGATGTGGCTTTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHWQCRS*MWLFSK
Trigger: CTTGCTGAAAAGCCACATCCAGGAGCGACACTGCCA...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCCATTTGTGGAAAACCTaGCAGTGTCGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASHLWKT*QCRSWM
Trigger: CATCCAGGAGCGACACTGCCAGGTTTTCCACAAATG...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCTGCACGAACAAGAGTaGGCACTCAGGGCACTTGAA +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVLHEQE*ALRALE
Trigger: TTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAAGCCACACTAGTGGCTaGTGGCTCAGTGGGAACTCG +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPSHTSG*WLSGNS
Trigger: CGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCT...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCATTCAATGTCCGACCGTaGCTCTTTTTCATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPFNVRP*LFFMWD
Trigger: GTCCCACATGAAAAAGAGCCACGGTCGGACATTGAA...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTTGCATAAGGCTGATGTaGCTCTCCAGAAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVCIRLM*LSRREG
Trigger: GCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCA...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGTGCCCCACTGCCAGCTaGGGAGGCAGGGAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWCPTAS*GGREVA
Trigger: TGCCACTTCCCTGCCTCCCCAGCTGGCAGTGGGGCA...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAATGGGGTCACGACAGGTaGTCAAACCTGCAATTCTAC +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEWGHDR*SNLQFY
Trigger: GTAGAATTGCAGGTTTGACCACCTGTCGTGACCCCA...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAAAGACCAGAAGATGCTaGACTCTGAGGGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPKTRRC*TLRELC
Trigger: ACACAGTTCCCTCAGAGTCCAGCATCTTCTGGTCTT...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTTCCTAAGGCTCCGGTaGCATCTGTTGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAFLRLR*HLLEKV
Trigger: CACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAA...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CAA 72 bp TCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTaGGAGAAGGTGAACAGTATCCTGAACCCCTTAGTC +
Preference number: 4 (lower is better)
Translates to: SCAQFLRLRWHL*EKVNSILNPLV
Trigger: GACTAAGGGGTTCAGGATACTGTTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CTGGCTCAAATCAGGGTTTCTGATGCCATGCATAAGGCTGATGTGGCTCTCCAGGAGGACAGCTTGGAATaGGCTGGCTTTAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: LAQIRVSDAMHKADVALQEDSLE*AGFRRC
Trigger: GCAGCGTCTAAAGCCAGCTCATTCCAAGCTGTCCTC...CTGGAGAGCCACATCAGCCTTATGCATGGCATCAGAAACCCTGATTTGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp CTGGCTCAAATCAGGGTTTCTGATGCCATGCATAAGGCTGATGTGGCTCTCCAGACTGCAGCTGGGAGATaGCGAGTCACTGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LAQIRVSDAMHKADVALQTAAGR*RVTGLC
Trigger: ACAAAGGCCAGTGACTCGTCATCTCCCAGCTGCAGT...CTGGAGAGCCACATCAGCCTTATGCATGGCATCAGAAACCCTGATTTGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp GCACTTGAAGACGCCCACCTGCGTCTTGCTGACATTCTGGTAAAAATGCTGCTGACGGGGTTGGAGCTGTaGAGGACCTTGTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: ALEDAHLRLADILVKMLLTGLEL*RTLLKT
Trigger: GGTCTTCAACAAGGTCCTTCACAGCTCCAACCCCGT...CAGCAGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAATGTGCCTCTTCTTGTTaGAGACCATTTCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGECASSC*RPFHRS
Trigger: GCTCCTGTGAAATGGTCTTCAACAAGAAGAGGCACA...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGGGCACTCAGGGCACTTaGAGACGCCCACCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWGTQGT*RRPPAS
Trigger: AGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCC...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAACACCGTGGGTGCTCTTaGCGTGTTGCATCAACTCCG +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQHRGCS*RVASTP
Trigger: CGGAGTTGATGCAACACGTCAAGAGCACCCACGGTG...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GCACTTGAAGACGCCCACCTGCGTCTTGCTGACATTCTGGTAAAAATGCTGCTGTTCAGATGGTTCACCTaGGGGGAATGTCCACCCGGA +
Preference number: 4 (lower is better)
Translates to: ALEDAHLRLADILVKMLLFRWFT*GECPPG
Trigger: TCCGGGTGGACATTCCCCTCAGGTGAACCATCTGAA...CAGCAGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTACTGTGTGTTCCCTGTaGGGGTTAGGCAACCTTTTC +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKATVCSL*GLGNLF
Trigger: GAAAAGGTTGCCTAACCCTCACAGGGAACACACAGT...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTGGCTCAAATCAGGGTTTCTGATGCCATGCATAAGGCTGATGTGGCTCTCCAGCAAGGCCACCAAGGCTaGCACACAAGAGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: LAQIRVSDAMHKADVALQQGHQG*HTRGQL
Trigger: AAGCTGTCCTCTTGTGTGGCAGCCTTGGTGGCCTTG...CTGGAGAGCCACATCAGCCTTATGCATGGCATCAGAAACCCTGATTTGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCATGCTGCTGCTGTCACTaGAGATGCTACGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPCCCCH*RCYEGC
Trigger: ACAGCCCTCGTAGCATCTGCAGTGACAGCAGCAGCA...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GCACTTGAAGACGCCCACCTGCGTCTTGCTGACATTCTGGTAAAAATGCTGCTGTCTCACTTTGGGAATTaGTGGTGGGGAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ALEDAHLRLADILVKMLLSHFGN*WWGAGS
Trigger: GCTGCCAGCTCCCCACCAGCAATTCCCAAAGTGAGA...CAGCAGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCATGCTCTGTTGCTTCTTaGCTGTCTGTGAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPCSVAS*LSVSLG
Trigger: CCCCAGGCTCACAGACAGGCAAGAAGCAACAGAGCA...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGAGGGGCCAGGGTGGATaGCTGCAGTGCTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWRGQGG*LQCCAL
Trigger: CAGAGCACAGCACTGCAGGCATCCACCCTGGCCCCT...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTGTCCTCTGGAAATGTaGAGCCAGGACCATGTAGTC +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKACPLEM*SQDHVV
Trigger: GACTACATGGTCCTGGCTGCACATTTCCAGAGGACA...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAACCTGTAGCCCACCTTaGGGGCATAGTGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPTCSPP*GHSAGN
Trigger: ATTGCCTGCACTATGCCCGCAAGGTGGGCTACAGGT...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGCACCTCCACACAGCCTaGTCCTCGTGCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWHLHTA*SSCLGG
Trigger: CCCACCCAAGCACGAGGAGCAGGCTGTGTGGAGGTG...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGAAAAGACCAGAAGATaGTGGACTCTGAGGGAACTG +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASEKTRR*WTLREL
Trigger: CAGTTCCCTCAGAGTCCAGCATCTTCTGGTCTTTTC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCATCCTCACTGGGTGTCTaGATGGCCTCCTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPSSLGV*MASLAS
Trigger: TGATGCCAAGGAGGCCATCCAGACACCCAGTGAGGA...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCACACTGCCGGCAGACTGGGAGTAATGTaGTCTTTCTCCGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GCVCAGCWGCGRTVHTAGRLGVM*SFSASN
Trigger: ATTTGAAGCGGAGAAAGACCACATTACTCCCAGTCT...GCCGGCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAGAGATTGGACTGAACTaGTTGAAGGTGGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEEIGLN*LKVGNG
Trigger: GCCATTACCCACCTTCAACCAGTTCAGTCCAATCTC...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACAAACATATGCAGCTCTaGAACCGGAAACTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: STLFPLLHYILLGATPCHKHMQL*NRKLSQ
Trigger: CTGGCTAAGTTTCCGGTTCCAGAGCTGCATATGTTT...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGCAAGGGCAGGGGTTCTaGCTTGGGTTCTTTCTTACA +
Preference number: 4 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLQGQGF*LGFFLT
Trigger: TGTAAGAAAGAACCCAAGCCAGAACCCCTGCCCTTG...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCTGGATCATCAGGATCTaGCAGGATCCTTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASWIIRI*QDPCDS
Trigger: ACTGTCACAAGGATCCTGCCAGATCCTGATGATCCA...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGGAGATGACGAGTCACTaGCCTTTGTCATGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVEMTSH*PLSCSR
Trigger: ACGAGAGCATGACAAAGGCCAGTGACTCGTCATCTC...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACCATTTGTGTAAGCTGTaGCTGGCTCCGTCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHHLCKL*LAPSLH
Trigger: GTGCAAAGACGGAGCCAGCCACAGCTTACACAAATG...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGCAGCCTTTTTCACCTaGTGGACCAGGGGCACCGAC +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYAAFFT*WTRGTD
Trigger: GTCGGTGCCCCTGGTCCACCAGGTGAAAAAGGCTGC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCGACCTCTACAATCAGTaGGGCAGCCTTTTTCACCTG +
Preference number: 4 (lower is better)
Translates to: MVVADVFAQAVGGVEGLFDLYNQ*GSLFHL
Trigger: CAGGTGAAAAAGGCTGCCCCACTGATTGTAGAGGTC...GAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAAAGAGGGGCACGGGGTTaGAGCTGTGAAGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQRGARG*SCEGPC
Trigger: ACAAGGTCCTTCACAGCTCCAACCCCGTGCCCCTCT...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTAGAAGAGCAGCGTCTTaGAGCACAGTGTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFRRAAS*STVCTV
Trigger: TACTGTGCACACTGTGCTCCAAGACGCTGCTCTTCT...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTGCCGACACGAACATTTaGTCCGCAGAGATAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVADTNI*SAEIGF
Trigger: GAAGCCTATCTCTGCGGACCAAATGTTCGTGTCGGC...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGGCTCAAATCAGGGTTTCTGATGCCATGCATAAGGCTGATGTGGCTCTCCAGAGCATTTGGCATACCTaGCAGGTCAGCCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LAQIRVSDAMHKADVALQSIWHT*QVSPSV
Trigger: GACAGAGGGGCTGACCTGCCAGGTATGCCAAATGCT...CTGGAGAGCCACATCAGCCTTATGCATGGCATCAGAAACCCTGATTTGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCATTGGGCAGCAGCATTTaGCATACCTGGCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPLGSSI*HTWQVS
Trigger: GCTGACCTGCCAGGTATGCCAAATGCTGCTGCCCAA...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTCATGTGGGACACGTAGCGCACAGAAACTGCACTaGTTGGGCAGCAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: MGTASMSDRGSFSCGTRSAQKLH*LGSSIW
Trigger: CCAAATGCTGCTGCCCAACCAGTGCAGTTTCTGTGC...GCTACGTGTCCCACATGAAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAAAGGCCAAGGTCAGGTaGACGACACCACAGTGGATG +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPKAKVR*TTPQWM
Trigger: CATCCACTGTGGTGTCGTCCACCTGACCTTGGCCTT...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATCACTCCTGGCACTCCTaGCAGGTCCAGCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYHSWHS*QVQPVF
Trigger: GAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTG...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GCACTTGAAGACGCCCACCTGCGTCTTGCTGACATTCTGGTAAAAATGCTGCTGAGGCTGTTGGGGGTGTaGAAGGACTGTTCACACTGC +
Preference number: 4 (lower is better)
Translates to: ALEDAHLRLADILVKMLLRLLGV*KDCSHC
Trigger: GCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCT...CAGCAGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGGTTCTCCCTCAGAGATaGGACAAACAGGGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVVLPQR*DKQGKS
Trigger: AGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGGCACCCCAACTGCATaGGAAGTAGGAAAGCAAATG +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAGTPTA*EVGKQM
Trigger: CATTTGCTTTCCTACTTCCCATGCAGTTGGGGTGCC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAAAGACCAGAAGATGCTaGACTCTGAGGGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEKTRRC*TLRELC
Trigger: ACACAGTTCCCTCAGAGTCCAGCATCTTCTGGTCTT...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGGCTCAAATCAGGGTTTCTGATGCCATGCATAAGGCTGATGTGGCTCTCCAGTGGACGACACCACAGTaGATGCACCTTGCGGGCATA +
Preference number: 4 (lower is better)
Translates to: LAQIRVSDAMHKADVALQWTTPQ*MHLAGI
Trigger: TATGCCCGCAAGGTGCATCCACTGTGGTGTCGTCCA...CTGGAGAGCCACATCAGCCTTATGCATGGCATCAGAAACCCTGATTTGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTTTTGTGTGGCCAGGCTaGTCCTCCTTAGTGACACTA +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVFVWPG*SSLVTL
Trigger: TAGTGTCACTAAGGAGGATCAGCCTGGCCACACAAA...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTTTCAAGACACTTGATTaGGTACCGGATGAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFFKTLD*VPDEPH
Trigger: GTGAGGCTCATCCGGTACTCAATCAAGTGTCTTGAA...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTTCAAGACACTTGATTaGGTACCGGATGAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAFKTLD*VPDEPH
Trigger: GTGAGGCTCATCCGGTACTCAATCAAGTGTCTTGAA...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAATCCCGCATCTGCTTGTaGCATTCAAGACACTTGATT +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGESRICL*HSRHLI
Trigger: AATCAAGTGTCTTGAATGTCACAAGCAGATGCGGGA...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTGTGCCTCTTCTTGTTaGAGACCATTTCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKACASSC*RPFHRS
Trigger: GCTCCTGTGAAATGGTCTTCAACAAGAAGAGGCACA...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGAGGCCCTCCTTGGGGTaGCAAGGCACAGATGGACTC +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWRPSLG*QGTDGL
Trigger: GAGTCCATCTGTGCCTTGTCACCCCAAGGAGGGCCT...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAAACGGTGAGCCTTTGCTaGTGCTGTCACTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQTVSLC*CCHCRC
Trigger: GCATCTGCAGTGACAGCAGCAGCAAAGGCTCACCGT...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAATGCCTGCAGTGCTGTaGTCTGTTGCTTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPMPAVL*SVASCL
Trigger: CAGGCAAGAAGCAACAGAGCACAGCACTGCAGGCAT...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCTTGGAGCACAGTGTaGACAGTACCTCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKASWSTV*TVPQCG
Trigger: TCCACATTGAGGTACTGTGCACACTGTGCTCCAAGA...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGGTGGGCACAGAAACTaGACTGGTTGGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYGGHRN*TGWAAA
Trigger: TGCTGCTGCCCAACCAGTGCAGTTTCTGTGCCCACC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAATCAACTCCGGCTTCTaGACGAACAAGAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPINSGF*TNKSGH
Trigger: GTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGAT...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAAAAGGACTGTTCACACTaGCGGCATGGGTACCGCTTC +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQKDCSH*RHGYRF
Trigger: GAAGCGGTACCCATGCCGGCAGTGTGAACAGTCCTT...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCACAATTATTAAAAGGGTaGAGACAGCGAGAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPQLLKG*RQRESL
Trigger: GAGAGACTCTCGCTGTCTGCACCCTTTTAATAATTG...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACACAGGTGGTCAAACCTaGAATTCTACCATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHTGGQT*NSTISA
Trigger: GGCAGAGATGGTAGAATTGCAGGTTTGACCACCTGT...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGAAAAGACCAGAAGATaGTGGACTCTGAGGGAACTG +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHEKTRR*WTLREL
Trigger: CAGTTCCCTCAGAGTCCAGCATCTTCTGGTCTTTTC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGATCCATACATATGCCTaGAGGTTTGAGGGGACTCTC +
Preference number: 4 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLIHTYA*RFEGTL
Trigger: GAGAGTCCCCTCAAACCTCCAGGCATATGTATGGAT...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAGCAGGGGTTCTGGCTTaGGTTCTTTCTTACAAAAAT +
Preference number: 4 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPAGVLA*VLSYKN
Trigger: ATTTTTGTAAGAAAGAACCCAAGCCAGAACCCCTGC...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTATACTGTTGCTAGGATaGCTGTTGAACTCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: MHKADVALQKGGPRKAGAILLLG*LLNSKA
Trigger: AGCTTTGGAGTTCAACAGCCATCCTAGCAACAGTAT...AGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp AGGATGTGTCCGCTGAAGACTGGAGGCTTGACAGCTCGTCCACATTTCGGGGAATGGATCATCAGGATCTaGCAGGATCCTTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: RMCPLKTGGLTARPHFGEWIIRI*QDPCDS
Trigger: ACTGTCACAAGGATCCTGCCAGATCCTGATGATCCA...TTCCCCGAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACACATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGCCTTTCCTGGCCCCCTaGGGGCTCCCTGAATTTGTG +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWPFLAP*GLPEFV
Trigger: CACAAATTCAGGGAGCCCCCAGGGGGCCAGGAAAGG...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGCCCAGAACTGCAGCTaGGAGATGACGAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYAQNCS*EMTSHW
Trigger: CCAGTGACTCGTCATCTCCCAGCTGCAGTTCTGGGC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTCATGTGGGACACGTAGCCATTTGTGTAAGCTGTaGCTGGCTCCGTCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: MGTASMSDRGSFSCGTRSHLCKL*LAPSLH
Trigger: GTGCAAAGACGGAGCCAGCCACAGCTTACACAAATG...GCTACGTGTCCCACATGAAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGCCACTGGCCGGCACGTaGATCCTGCTGTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKPLAGT*ILLSAG
Trigger: GCCTGCGGACAGCAGGATCCACGTGCCGGCCAGTGG...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGGCTTCACCAGCAGCTaGGAACACTGCATGACGAGC +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYGFTSS*EHCMTS
Trigger: GCTCGTCATGCAGTGTTCCCAGCTGCTGGTGAAGCC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGCACAGAAACTGCACTaGTTGGGCAGCAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPAQKLH*LGSSIW
Trigger: CCAAATGCTGCTGCCCAACCAGTGCAGTTTCTGTGC...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCATTTGTGGAAAACCTaGCAGTGTCGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVHLWKT*QCRSWM
Trigger: CATCCAGGAGCGACACTGCCAGGTTTTCCACAAATG...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTCAGAATGCACATTTGTaGAAAACCTGGCAGTGTCGC +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAQNAHL*KTWQCR
Trigger: GCGACACTGCCAGGTTTTCCACAAATGTGCATTCTG...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGTGTCCGCTGAAGACTaGAGGCTTGACAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYVSAED*RLDSSS
Trigger: GGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACAC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CAGCTCGTCCACATTTCGGGGAACACCGTGGGTGCTCTTGACGTGTTGCATCAATTCAATGTCCGACCGTaGCTCTTTTTCATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: QLVHISGNTVGALDVLHQFNVRP*LFFMWD
Trigger: GTCCCACATGAAAAAGAGCCACGGTCGGACATTGAA...TTGATGCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGCTCCTCGTGCTTGGGTaGGCCCTGACTCCACCATCA +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWLLVLG*ALTPPS
Trigger: TGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAG...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCCCAGGGTACAGGGATaGCTTCCTGTAACTAGAATT +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVPRVQG*LPVTRI
Trigger: AATTCTAGTTACAGGAAGCCATCCCTGTACCCTGGG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCAGGTTTTCCAGGGACTaGCTCAGCATTTTTCCAACT +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASRFSRD*LSIFPT
Trigger: AGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCT...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTGTGACAAGGCACAGATaGACTCCAAAGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVVTRHR*TPKRTW
Trigger: CCAGGTTCTCTTTGGAGTCCATCTGTGCCTTGTCAC...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGGCTCGAGGCCCTCCTTaGGGTGACAAGGCACAGATG +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWARGPP*GDKAQM
Trigger: CATCTGTGCCTTGTCACCCCAAGGAGGGCCTCGAGC...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGCTGACTGGTATCCGTaGCAGGTAGGGACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYADWYP*QVGTSS
Trigger: AGAGGAGGTCCCTACCTGCCACGGATACCAGTCAGC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560079.7
CDS-3UTR TCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTCAAATCCGTTATCTTTaGTGGGATCCTCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAQIRYL*WDPQVL
Trigger: CAGAACCTGAGGATCCCATCAAAGATAACGGATTTG...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGCATCCGGATCCTTGTaGGGTTCCACTGTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYASGSL*GSTVFC
Trigger: GCAGAACACAGTGGAACCTCACAAGGATCCGGATGC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGAGGACAGCTTGGAATaGGCTGGCTTTAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYEDSLE*AGFRRC
Trigger: GCAGCGTCTAAAGCCAGCTCATTCCAAGCTGTCCTC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATAGACTTGGCTGTCACTaGTGCAGCAACACTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYRLGCH*CSNTVG
Trigger: CCCCACAGTGTTGCTGCATCAGTGACAGCCAAGTCT...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTTGTGAAGGACCTTGTTaGAGACCTCTACAATCAGTG +
Preference number: 4 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFCEGPC*RPLQSV
Trigger: CACTGATTGTAGAGGTCTTCAACAAGGTCCTTCACA...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATACGGGGTTGGAGCTGTaGAGGACCTTGTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYTGLEL*RTLLKT
Trigger: GGTCTTCAACAAGGTCCTTCACAGCTCCAACCCCGT...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp ATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTCATGTGGGACACGTAGCTGTGCCTCTTCTTGTTaGAGACCATTTCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: MGTASMSDRGSFSCGTRSCASSC*RPFHRS
Trigger: GCTCCTGTGAAATGGTCTTCAACAAGAAGAGGCACA...GCTACGTGTCCCACATGAAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR GCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGTGTTCTGCCCACTTTaGTCGTGTTCCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYVFCPL*SCSCWL
Trigger: GAGCCAGCAGGAACACGAGCAAAGTGGGCAGAACAC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATTCTCACTTTGGGAATTaGTGGTGGGGAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYSHFGN*WWGAGS
Trigger: GCTGCCAGCTCCCCACCAGCAATTCCCAAAGTGAGA...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAAGGCTCCCTGAATTTGTaGCTGCCTCAGGAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQGSLNL*LPQESA
Trigger: AGCACTTTCCTGAGGCAGGCACAAATTCAGGGAGCC...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCACAATTCTACCATCTCTaGCTGCTCTCCAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPQFYHL*LLSSYH
Trigger: GTGGTAGCTGGAGAGCAGGCAGAGATGGTAGAATTG...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCCTAGAATCTAGAAGGTaGTGTCTTGGTCAGATCAGA +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASLESRR*CLGQIR
Trigger: TCTGATCTGACCAAGACAGCACCTTCTAGATTCTAG...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGCTTCAAATGACTCCTaGCGGCTGGTGTTCTTGACA +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPASNDS*RLVFLT
Trigger: TGTCAAGAACACCAGCCGCCAGGAGTCATTTGAAGC...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATCCCCGAAGAATCGAGTaGCATCCGGATCCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYPRRIE*HPDPCE
Trigger: CTCACAAGGATCCGGATGCCACTCGATTCTTCGGGG...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCATACTGTTGCTAGGATaGCTGTTGAACTCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASILLLG*LLNSKA
Trigger: AGCTTTGGAGTTCAACAGCCATCCTAGCAACAGTAT...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGCCCGGGCAAGCCCCTTaGACTCTCCAATACTGTTGC +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWPGQAP*TLQYCC
Trigger: GCAACAGTATTGGAGAGTCCAAGGGGCTTGCCCGGG...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATTTTGGGAATTGCTGGTaGGGAGCTGGCAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYFGNCW*GAGSHR
Trigger: TCTGTGGCTGCCAGCTCCCCACCAGCAATTCCCAAA...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ACTGTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGTTTGCACTGAAGACTTaGCTGTCACTGATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: TVSWLLRMCLRRLLGVWKFALKT*LSLMQQ
Trigger: TTGCTGCATCAGTGACAGCCAAGTCTTCAGTGCAAA...CTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAAGAAGAGCAGCGTCTTaGAGCACAGTGTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPRRAAS*STVCTV
Trigger: TACTGTGCACACTGTGCTCCAAGACGCTGCTCTTCT...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATTTGGGCAGCAGCATTTaGCATACCTGGCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYLGSSI*HTWQVS
Trigger: GCTGACCTGCCAGGTATGCCAAATGCTGCTGCCCAA...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTTTCAATGTCCGACCGTaGCTCTTTTTCATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVFNVRP*LFFMWD
Trigger: GTCCCACATGAAAAAGAGCCACGGTCGGACATTGAA...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGCCTGCTCCTCGTGCTTaGGTGGGCCCTGACTCCACC +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKPAPRA*VGPDST
Trigger: GGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAGG...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTAAGGAGATGTATATCTaGGGTCACGACAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVKEMYI*GHDRWS
Trigger: TGACCACCTGTCGTGACCCCAGATATACATCTCCTT...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGGATTTGTTAAGAGCTaGCTAAGGACAGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAGFVKS*LRTESR
Trigger: CCTGGATTCTGTCCTTAGCCAGCTCTTAACAAATCC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTACTCTTACTAAAGAATaGCTAGGTGTCTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKATLTKE*LGVWAT
Trigger: AGTGGCCCAGACACCTAGCCATTCTTTAGTAAGAGT...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATTTTCTCCGCTTCAAATaGCTCCTGGCGGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYFLRFK*LLAAGV
Trigger: AACACCAGCCGCCAGGAGTCATTTGAAGCGGAGAAA...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAATTTGTGTGGCCAGGCTaGTCCTCCTTAGTGACACTA +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQFVWPG*SSLVTL
Trigger: TAGTGTCACTAAGGAGGATCAGCCTGGCCACACAAA...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGGCAGCCACAGACGGTaGGCCTTTGCTGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKGSHRR*AFAAAV
Trigger: GACAGCAGCAGCAAAGGCTCACCGTCTGTGGCTGCC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGTTCAGATGGTTCACCTaGGGGGAATGTCCACCCGGA +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWFRWFT*GECPPG
Trigger: TCCGGGTGGACATTCCCCTCAGGTGAACCATCTGAA...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAGGGGTTCTCTTATGTTaGAAATCAACTGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEGVLLC*KSTEGK
Trigger: CTTTCCTTCAGTTGATTTTCAACATAAGAGAACCCC...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCACTGTGAGATCTTTGTaGGGATTAAAGGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASTVRSL*GLKERI
Trigger: GATTCTCTCCTTTAATCCTCACAAAGATCTCACAGT...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGGAAATGTCAACGGTGTaGTGCTCGAGGCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWEMSTV*CSRPSL
Trigger: CAAGGAGGGCCTCGAGCATCACACCGTTGACATTTC...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGAAGATGCTGGACTCTaGGGGAACTGTGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYEDAGL*GNCVFP
Trigger: AGGGAACACACAGTTCCCTCAGAGTCCAGCATCTTC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAAGGGAAGGCAAAGTGTTaGGCTTACTGGGCCACAATT +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQGKAKC*AYWATI
Trigger: AATTGTGGCCCAGTAAGCTCAACACTTTGCCTTCCC...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGTGCTGTCACTGCAGATaGTACGAGGGCTGTCCGATG +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWCCHCR*YEGCPM
Trigger: CATCGGACAGCCCTCGTAGCATCTGCAGTGACAGCA...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGGTGGATGCCTGCAGTaGTGTGCTCTGTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYGGCLQ*CALLLL
Trigger: AAGAAGCAACAGAGCACAGCACTGCAGGCATCCACC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAACAGGTGGTCAAACCTaGAATTCTACCATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPTGGQT*NSTISA
Trigger: GGCAGAGATGGTAGAATTGCAGGTTTGACCACCTGT...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATTCTCATTCTCCTCACTaGGTGTCTGGATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYSHSPH*VSGWPP
Trigger: AGGAGGCCATCCAGACACCCAGTGAGGAGAATGAGA...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GCACTTGAAGACGCCCACCTGCGTCTTGCTGACATTCTGGTAAAAATGCTGCTGTTCTGGGCTGGAGATTaGACTGAACTGGTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: ALEDAHLRLADILVKMLLFWAGD*TELVEG
Trigger: ACCTTCAACCAGTTCAGTCCAATCTCCAGCCCAGAA...CAGCAGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAACAAGGGCAGGGGTTCTaGCTTGGGTTCTTTCTTACA +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQQGQGF*LGFFLT
Trigger: TGTAAGAAAGAACCCAAGCCAGAACCCCTGCCCTTG...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAAACAGGGGACTTACTTaGATCATCAGGATCTGGCAG +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPNRGLT*IIRIWQ
Trigger: CTGCCAGATCCTGATGATCCAAGTAAGTCCCCTGTT...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGGCTCAAATCAGGGTTTCTGATGCCATGCATAAGGCTGATGTGGCTCTCCAGAACAGGGGACTTACTTaGATCATCAGGATCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LAQIRVSDAMHKADVALQNRGLT*IIRIWQ
Trigger: CTGCCAGATCCTGATGATCCAAGTAAGTCCCCTGTT...CTGGAGAGCCACATCAGCCTTATGCATGGCATCAGAAACCCTGATTTGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTACCCCTGGCATCTCGCTaGGGGCCTCTGCAATGGCGC +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLPLASR*GPLQWR
Trigger: GCGCCATTGCAGAGGCCCCCAGCGAGATGCCAGGGG...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAGGGTCTGGGTAGAGTaGCAAGGCTGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKRVWVE*QGWRRG
Trigger: CCCCCTCCTCCAGCCTTGCCACTCTACCCAGACCCT...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTAGGTTTTCCAGGGACTaGCTCAGCATTTTTCCAACT +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVRFSRD*LSIFPT
Trigger: AGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCT...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATAAACCACTGACAAGCTaGCAGCCTGTCAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYKPLTS*QPVKAA
Trigger: GGCTGCTTTGACAGGCTGCCAGCTTGTCAGTGGTTT...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATTTCCTAAGGCTCCGGTaGCATCTGTTGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYFLRLR*HLLEKV
Trigger: CACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAA...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CAA 72 bp AACTTCTTTACTGTGTCATGGTTGTTGCGGATGTGTTaGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCA +
Preference number: 4 (lower is better)
Translates to: NFFTVSWLLRMC*RRLLGVWKDCS
Trigger: TGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGTAAAGAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCACAAATCCGTTATCTTTaGTGGGATCCTCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPQIRYL*WDPQVL
Trigger: CAGAACCTGAGGATCCCATCAAAGATAACGGATTTG...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GCACTTGAAGACGCCCACCTGCGTCTTGCTGACATTCTGGTAAAAATGCTGCTGTCCCGCATCTGCTTGTaGCATTCAAGACACTTGATT +
Preference number: 4 (lower is better)
Translates to: ALEDAHLRLADILVKMLLSRICL*HSRHLI
Trigger: AATCAAGTGTCTTGAATGTCACAAGCAGATGCGGGA...CAGCAGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR TCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAACCACCTGCGTCTTGCTaGCATTCTGGTAAAAATGCT +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQPPASC*HSGKNA
Trigger: AGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGG...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTATGTTGAAAATCAACTaGAGGAAAGATGAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAMLKIN*RKDEGA
Trigger: GGCACCTTCATCTTTCCTTCAGTTGATTTTCAACAT...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGTATTTAATGCCTCCTTaGAAGATGACCTCTAAGCAC +
Preference number: 4 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVYLMPP*KMTSKH
Trigger: GTGCTTAGAGGTCATCTTTCAAGGAGGCATTAAATA...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTTTACTAACTCTATTGTaGAGGAGAGGAGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVLLTLL*RRGDSE
Trigger: CTCACTGTCTCCTCTCCTTCACAATAGAGTTAGTAA...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTACTGTGAGATCTTTGTaGGGATTAAAGGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKATVRSL*GLKERI
Trigger: GATTCTCTCCTTTAATCCTCACAAAGATCTCACAGT...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAACCCATACTTGGGACCTaGGTCCTAGTCTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQPILGT*VLVSTF
Trigger: AAAAGTTGAGACTAGGACGCAGGTCCCAAGTATGGG...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGTCCCCCATGGCTGGATaGTGGCAAGGGCTGACTGGT +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKSPMAG*WQGLTG
Trigger: ACCAGTCAGCCCTTGCCAGCATCCAGCCATGGGGGA...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560079.7
CDS-3UTR CCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAATTCTGGGCTGGAGATTaGACTGAACTGGTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQFWAGD*TELVEG
Trigger: ACCTTCAACCAGTTCAGTCCAATCTCCAGCCCAGAA...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGGGGATCCTCAGGTTCTaGGCTGGAGATTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWGILRF*AGDWTE
Trigger: TTCAGTCCAATCTCCAGCCCAGAACCTGAGGATCCC...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTGGCTCAAATCAGGGTTTCTGATGCCATGCATAAGGCTGATGTGGCTCTCCAGAAACATATGCAGCTCTaGAACCGGAAACTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LAQIRVSDAMHKADVALQKHMQL*NRKLSQ
Trigger: CTGGCTAAGTTTCCGGTTCCAGAGCTGCATATGTTT...CTGGAGAGCCACATCAGCCTTATGCATGGCATCAGAAACCCTGATTTGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATCAAGGGCAGGGGTTCTaGCTTGGGTTCTTTCTTACA +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYQGQGF*LGFFLT
Trigger: TGTAAGAAAGAACCCAAGCCAGAACCCCTGCCCTTG...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GCACTTGAAGACGCCCACCTGCGTCTTGCTGACATTCTGGTAAAAATGCTGCTGACGAGGGCTGTCCGATaGCTTGATACTTTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: ALEDAHLRLADILVKMLLTRAVR*LDTFSS
Trigger: ACTAGAAAAAGTATCAAGCCATCGGACAGCCCTCGT...CAGCAGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGACCTCTACAATCAGTaGGGCAGCCTTTTTCACCTG +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYDLYNQ*GSLFHL
Trigger: CAGGTGAAAAAGGCTGCCCCACTGATTGTAGAGGTC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAGGCAGCAGTACCCACTaGCCGGCACGTGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLGSSTH*PARGSC
Trigger: GCAGGATCCACGTGCCGGCCAGTGGGTACTGCTGCC...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAACAGAATGCACATTTGTaGAAAACCTGGCAGTGTCGC +
Preference number: 4 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQQNAHL*KTWQCR
Trigger: GCGACACTGCCAGGTTTTCCACAAATGTGCATTCTG...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAGGCAGCCACAGACGGTaGGCCTTTGCTGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKGSHRR*AFAAAV
Trigger: GACAGCAGCAGCAAAGGCTCACCGTCTGTGGCTGCC...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATGAAACTGCCTGGTGCTaGATATACAGTGGTGAACAG +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYETAWC*IYSGEQ
Trigger: CTGTTCACCACTGTATATTCAGCACCAGGCAGTTTC...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGCTGTAGCTACCAATTaGATCAGATTCATTCATTCA +
Preference number: 4 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHAVATN*IRFIHS
Trigger: TGAATGAATGAATCTGATTCAATTGGTAGCTACAGC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGTGTCCTCTGGAAATGTaGAGCCAGGACCATGTAGTC +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWCPLEM*SQDHVV
Trigger: GACTACATGGTCCTGGCTGCACATTTCCAGAGGACA...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGGTGGCACTGTGGTCTaGAGTGCTGCTGGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKGGTVV*SAAGSL
Trigger: AAGACTGCCAGCAGCACTGCAGACCACAGTGCCACC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAGAAACAGGCCTGGGTTaGCCCACTGCCAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLETGLG*PTASWG
Trigger: TCCCCAGCTGGCAGTGGGGCAACCCAGGCCTGTTTC...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCACTAGAATCTAGAAGGTaGTGTCTTGGTCAGATCAGA +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPLESRR*CLGQIR
Trigger: TCTGATCTGACCAAGACAGCACCTTCTAGATTCTAG...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GCACTTGAAGACGCCCACCTGCGTCTTGCTGACATTCTGGTAAAAATGCTGCTGGCAGGGGTTCTGGCTTaGGTTCTTTCTTACAAAAAT +
Preference number: 4 (lower is better)
Translates to: ALEDAHLRLADILVKMLLAGVLA*VLSYKN
Trigger: ATTTTTGTAAGAAAGAACCCAAGCCAGAACCCCTGC...CAGCAGCATTTTTACCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATTGCTGGTGGGGAGCTaGCAGCCACAGACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLLLVGS*QPQTVS
Trigger: GCTCACCGTCTGTGGCTGCCAGCTCCCCACCAGCAA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTACTTTGGGCAGGAGGTTaGCAGGGGCCAGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLLWAGG*QGPGWM
Trigger: CATCCACCCTGGCCCCTGCCAACCTCCTGCCCAAAG...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTACCAAGTGCACGGCTTTaGGCAGGAGGTTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLPSARL*AGGWQG
Trigger: CCCCTGCCAACCTCCTGCCCAAAGCCGTGCACTTGG...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGGACGAGGTTCAGGTTaGCCAAGTGCACGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKGRGSG*PSARLW
Trigger: CCAAAGCCGTGCACTTGGCCAACCTGAACCTCGTCC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGGTTCTCCCTCAGAGATaGGACAAACAGGGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWVLPQR*DKQGKS
Trigger: AGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAGGGGACTTGTGTGCATaGATCCGCTGGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKGDLCA*IRWWAQ
Trigger: CTGTGCCCACCAGCGGATTCATGCACACAAGTCCCC...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGTGCTGTCACTGCAGATaGTACGAGGGCTGTCCGATG +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKCCHCR*YEGCPM
Trigger: CATCGGACAGCCCTCGTAGCATCTGCAGTGACAGCA...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAGCCAGGGTGGATGCCTaGAGTGCTGTGCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKARVDA*SAVLCC
Trigger: GCAACAGAGCACAGCACTGCAGGCATCCACCCTGGC...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGGCTGGCTCCGTCTTTaGACTGAAGACTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKGWLRL*TEDLAV
Trigger: GACAGCCAAGTCTTCAGTGCAAAGACGGAGCCAGCC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAGGACTGTTCACACTaGCGGCATGGGTACCGCTTC +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKKDCSH*RHGYRF
Trigger: GAAGCGGTACCCATGCCGGCAGTGTGAACAGTCCTT...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATTTTGCACTGAAGACTTaGCTGTCACTGATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYFALKT*LSLMQQ
Trigger: TTGCTGCATCAGTGACAGCCAAGTCTTCAGTGCAAA...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATCTGGAACCCACTCCTaGCACTCCTGGCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLSGTHS*HSWQVQ
Trigger: CTGGACCTGCCAGGAGTGCCAGGAGTGGGTTCCAGA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAGGCTGTTGGGGGTGTaGAAGGACTGTTCACACTGC +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKRLLGV*KDCSHC
Trigger: GCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCT...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCATTCTTTACTGTGTCATaGTTGTTGCGGATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPFFTVS*LLRMCL
Trigger: CAAACACATCCGCAACAACCATGACACAGTAAAGAA...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGGGGCCAGGCTCACTTaGAGAGGAATACAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKGARLT*RGIQEP
Trigger: AGGCTCTTGTATTCCTCTCCAAGTGAGCCTGGCCCC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAACTCCTCGTGCTTGGGTaGGCCCTGACTCCACCATCA +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKLLVLG*ALTPPS
Trigger: TGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAG...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAGCTCGAGGCCCTCCTTaGGGTGACAAGGCACAGATG +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLARGPP*GDKAQM
Trigger: CATCTGTGCCTTGTCACCCCAAGGAGGGCCTCGAGC...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATTTCTACCTAGGCACATaGTCTAGAGTCCAAACACCA +
Preference number: 4 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYFYLGT*SRVQTP
Trigger: TGGTGTTTGGACTCTAGACCATGTGCCTAGGTAGAA...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560079.7
CDS-3UTR TCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAAGCTACCACTGTGTCTaGGCAGGAAGGGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLSYHCV*AGRDPA
Trigger: GGCTGGATCCCTTCCTGCTCAGACACAGTGGTAGCT...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGGTCAGATCAGACCCTaGGAGAACAGCTGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKGQIRP*ENSCSY
Trigger: GTAGCTACAGCTGTTCTCTCAGGGTCTGATCTGACC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAAGCAGCTGGGAACACTaGATGACGAGCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLSSWEH*MTSPLL
Trigger: GAGCAAGGGGCTCGTCATGCAGTGTTCCCAGCTGCT...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGTTCTCCCTTCCTTCTTaGCTATTAAACTCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWFSLPS*LLNSPL
Trigger: GAGCGGAGAGTTTAATAGGCAAGAAGGAAGGGAGAA...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAACCCGGGCAAGCCCCTTaGACTCTCCAATACTGTTGC +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKPGQAP*TLQYCC
Trigger: GCAACAGTATTGGAGAGTCCAAGGGGCTTGCCCGGG...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGACGAGGGCTGTCCGATaGCTTGATACTTTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWTRAVR*LDTFSS
Trigger: ACTAGAAAAAGTATCAAGCCATCGGACAGCCCTCGT...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGTTTGCACTGAAGACTTaGCTGTCACTGATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWFALKT*LSLMQQ
Trigger: TTGCTGCATCAGTGACAGCCAAGTCTTCAGTGCAAA...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGCCGACACGAACATTTaGTCCGCAGAGATAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKADTNI*SAEIGF
Trigger: GAAGCCTATCTCTGCGGACCAAATGTTCGTGTCGGC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGTGTCGCTCCTGGATGTaGCTTTTCAGCAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKCRSWM*LFSKAK
Trigger: CTTGGCCTTGCTGAAAAGCCACATCCAGGAGCGACA...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAGTAGCTCTCCCGATCTaGAACCCACTCCTGGCACTC +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKVALPI*NPLLAL
Trigger: GAGTGCCAGGAGTGGGTTCCAGATCGGGAGAGCTAC...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGACTCTTACTAAAGAATaGCTAGGTGTCTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWTLTKE*LGVWAT
Trigger: AGTGGCCCAGACACCTAGCCATTCTTTAGTAAGAGT...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAACCACTGACAAGCTaGCAGCCTGTCAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKKPLTS*QPVKAA
Trigger: GGCTGCTTTGACAGGCTGCCAGCTTGTCAGTGGTTT...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGATATGCCTGGAGGTTTaGGGGGACTCTCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKICLEV*GDSHSP
Trigger: AGGAGAATGAGAGTCCCCTCAAACCTCCAGGCATAT...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAATTCAGATGGTTCACCTaGGGGGAATGTCCACCCGGA +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKFRWFT*GECPPG
Trigger: TCCGGGTGGACATTCCCCTCAGGTGAACCATCTGAA...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAATCTTGGAGGTGACTTaGCCATTGTGGAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLILEVT*PLWSRS
Trigger: GGAGCGGCTCCACAATGGTCAAGTCACCTCCAAGAT...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAATCTCACTTTGGGAATTaGTGGTGGGGAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKSHFGN*WWGAGS
Trigger: GCTGCCAGCTCCCCACCAGCAATTCCCAAAGTGAGA...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAACCTGCCTCAGGAAAGTaGTCTTCCACAGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKPASGK*SSTGTS
Trigger: TGAGGTGCCTGTGGAAGAGCACTTTCCTGAGGCAGG...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAGGCTGGCTCCGTCTTTaGACTGAAGACTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLGWLRL*TEDLAV
Trigger: GACAGCCAAGTCTTCAGTGCAAAGACGGAGCCAGCC...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATGTTGCGGATGTGTTTaGGCAGGCTGTTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLCCGCV*AGCWGC
Trigger: ACACCCCCAACAGCCTGCGCAAACACATCCGCAACA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATGGCATCAAGGCTGGTaGGGTCTGGGATGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLWHQGW*GLGCQR
Trigger: CCTTTGACATCCCAGACCCCACCAGCCTTGATGCCA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTACCCCGAAGAATCGAGTaGCATCCGGATCCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLPRRIE*HPDPCE
Trigger: CTCACAAGGATCCGGATGCCACTCGATTCTTCGGGG...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGATACTGTTGCTAGGATaGCTGTTGAACTCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWILLLG*LLNSKA
Trigger: AGCTTTGGAGTTCAACAGCCATCCTAGCAACAGTAT...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGAGATGACGAGTCACTaGCCTTTGTCATGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKEMTSH*PLSCSR
Trigger: ACGAGAGCATGACAAAGGCCAGTGACTCGTCATCTC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGACCTCTACAATCAGTaGGGCAGCCTTTTTCACCTG +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKDLYNQ*GSLFHL
Trigger: CAGGTGAAAAAGGCTGCCCCACTGATTGTAGAGGTC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATTTCGGGGAACACCGTaGGTGCTCTTGACGTGTTGC +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLFRGTP*VLLTCC
Trigger: GCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATGCATAAGGCTGATGTaGCTCTCCAGAAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLCIRLM*LSRREG
Trigger: GCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAGGGGCCAGGCTCACTTaGAGAGGAATACAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKGARLT*RGIQEP
Trigger: AGGCTCTTGTATTCCTCTCCAAGTGAGCCTGGCCCC...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAGGGGCTGATCCTGAGTaGGACAAGGACACACTTTCA +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLGADPE*DKDTLS
Trigger: TGAAAGTGTGTCCTTGTCTCACTCAGGATCAGCCCC...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAAGGAGCACTTATAAATaGGCTGGGAGGGTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLRSTYK*AGRVCG
Trigger: CCCACAGACCCTCCCAGCTCATTTATAAGTGCTCCT...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGTATTTAATGCCTCCTTaGAAGATGACCTCTAAGCAC +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWYLMPP*KMTSKH
Trigger: GTGCTTAGAGGTCATCTTTCAAGGAGGCATTAAATA...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAGAAGATGCTGGACTCTaGGGGAACTGTGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLEDAGL*GNCVFP
Trigger: AGGGAACACACAGTTCCCTCAGAGTCCAGCATCTTC...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGTCTTGGAGCACAGTGTaGACAGTACCTCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKSWSTV*TVPQCG
Trigger: TCCACATTGAGGTACTGTGCACACTGTGCTCCAAGA...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAATTGAAGACGCCCACCTaGGTCTTGCTGACATTCTGG +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKLKTPT*VLLTFW
Trigger: CCAGAATGTCAGCAAGACGCAGGTGGGCGTCTTCAA...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGATCCATACATATGCCTaGAGGTTTGAGGGGACTCTC +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKIHTYA*RFEGTL
Trigger: GAGAGTCCCCTCAAACCTCCAGGCATATGTATGGAT...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAGGGATCCTCAGGTTCTaGGCTGGAGATTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKGILRF*AGDWTE
Trigger: TTCAGTCCAATCTCCAGCCCAGAACCTGAGGATCCC...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGTCCCGCATCTGCTTGTaGCATTCAAGACACTTGATT +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKSRICL*HSRHLI
Trigger: AATCAAGTGTCTTGAATGTCACAAGCAGATGCGGGA...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAACTGTGTGTTCCCTGTaGGGGTTAGGCAACCTTTTC +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKTVCSL*GLGNLF
Trigger: GAAAAGGTTGCCTAACCCTCACAGGGAACACACAGT...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGGCTGTAGCTACCAATTaGATCAGATTCATTCATTCA +
Preference number: 4 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWAVATN*IRFIHS
Trigger: TGAATGAATGAATCTGATTCAATTGGTAGCTACAGC...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAGGGTTTCTGATGCCATaGATAAGGCTGATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLGFLMP*IRLMWL
Trigger: GAGCCACATCAGCCTTATGCATGGCATCAGAAACCC...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTACATTTGTGTAAGCTGTaGCTGGCTCCGTCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLHLCKL*LAPSLH
Trigger: GTGCAAAGACGGAGCCAGCCACAGCTTACACAAATG...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAACTGTCAAAGCAGCCTTaGTCACTAACGAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKLSKQP*SLTSTV
Trigger: CACTGTGCTCGTTAGTGACCAAGGCTGCTTTGACAG...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
3UTR CAA 72 bp CTAGAGGCTGACCTCCATGGGGAAGCTTACCATTTATaGTATACCCTTTTGTATTGTGGAATGTCTTACCAT +
Preference number: 4 (lower is better)
Translates to: LEADLHGEAYHL*YTLLYCGMSYH
Trigger: ATGGTAAGACATTCCACAATACAAAAGGGTATACAATAAATGGTAAGCTTCCCCATGGAGGTCAGCCTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATTCAAGACACTTGATTaGGTACCGGATGAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLFKTLD*VPDEPH
Trigger: GTGAGGCTCATCCGGTACTCAATCAAGTGTCTTGAA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAACCCATACTTGGGACCTaGGTCCTAGTCTCAACTTTT +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKPILGT*VLVSTF
Trigger: AAAAGTTGAGACTAGGACGCAGGTCCCAAGTATGGG...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAATTCTGGGCTGGAGATTaGACTGAACTGGTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKFWAGD*TELVEG
Trigger: ACCTTCAACCAGTTCAGTCCAATCTCCAGCCCAGAA...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAAACAGGGGACTTACTTaGATCATCAGGATCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKNRGLT*IIRIWQ
Trigger: CTGCCAGATCCTGATGATCCAAGTAAGTCCCCTGTT...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAACCCAGGGTACAGGGATaGCTTCCTGTAACTAGAATT +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKPRVQG*LPVTRI
Trigger: AATTCTAGTTACAGGAAGCCATCCCTGTACCCTGGG...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAAAGGAGATGTATATCTaGGGTCACGACAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKKEMYI*GHDRWS
Trigger: TGACCACCTGTCGTGACCCCAGATATACATCTCCTT...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAATGTGAAGGACCTTGTTaGAGACCTCTACAATCAGTG +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKCEGPC*RPLQSV
Trigger: CACTGATTGTAGAGGTCTTCAACAAGGTCCTTCACA...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR TCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATGTGAAGGACCTTGTTaGAGACCTCTACAATCAGTG +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLCEGPC*RPLQSV
Trigger: CACTGATTGTAGAGGTCTTCAACAAGGTCCTTCACA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAACGAGGGCTGTCCGATaGCTTGATACTTTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKTRAVR*LDTFSS
Trigger: ACTAGAAAAAGTATCAAGCCATCGGACAGCCCTCGT...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAGGATTTGTTAAGAGCTaGCTAAGGACAGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLGFVKS*LRTESR
Trigger: CCTGGATTCTGTCCTTAGCCAGCTCTTAACAAATCC...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR GCA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTACAATTATTAAAAGGGTaGAGACAGCGAGAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLQLLKG*RQRESL
Trigger: GAGAGACTCTCGCTGTCTGCACCCTTTTAATAATTG...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAAGACTGGGAGTAATGTaGTCTTTCTCCGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKRLGVM*SFSASN
Trigger: ATTTGAAGCGGAGAAAGACCACATTACTCCCAGTCT...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAGCAGGGGTTCTGGCTTaGGTTCTTTCTTACAAAAAT +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKAGVLA*VLSYKN
Trigger: ATTTTTGTAAGAAAGAACCCAAGCCAGAACCCCTGC...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAATTCTTTACTGTGTCATaGTTGTTGCGGATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKFFTVS*LLRMCL
Trigger: CAAACACATCCGCAACAACCATGACACAGTAAAGAA...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CCA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGTTTCCACTAAAAACTTaGCATTTGATAGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKFPLKT*HLIEGK
Trigger: TTTCCCCTCTATCAAATGCCAAGTTTTTAGTGGAAA...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CACTCCTGGCACTCCTGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTACGAGCCCCTTGCTCTaGTGGTCACGGGCGTGCCGG +
Preference number: 5 (lower is better)
Translates to: HSWHSWQVQPVFLSRGLATSPLL*WSRACR
Trigger: CCGGCACGCCCGTGACCACAAGAGCAAGGGGCTCGT...AGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCAGGAGTGCCAGGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGGGCACTCAGGGCACTaGAAGACGCCCACCTGCGTC +
Preference number: 5 (lower is better)
Translates to: AGGSVGTREPGRLEDVSAGHSGH*KTPTCV
Trigger: GACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCC...AGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS TCA 90 bp AGTACCCACTGGCCGGCACGTGGATCCTGCTGTCCGCAGGCGGGCTaGGATTTGGCGCATAGAGGGGCACGGGGTTGGAGCTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: STHWPARGSCCPQAG*DLAHRGARGWSCEG
Trigger: TCCTTCACAGCTCCAACCCCGTGCCCCTCTATGCGCCAAATCTCAGCCCGCCTGCGGACAGCAGGATCCACGTGCCGGCCAGTGGGTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 90 bp ACTGGCCGGCACGTGGATCCTGCTGTCCGCAGGCGGGCTGAGATTTaGCGCATAGAGGGGCACGGGGTTGGAGCTGTGAAGGACCTTGTT +
Preference number: 5 (lower is better)
Translates to: TGRHVDPAVRRRAEI*RIEGHGVGAVKDLV
Trigger: AACAAGGTCCTTCACAGCTCCAACCCCGTGCCCCTCTATGCGCCAAATCTCAGCCCGCCTGCGGACAGCAGGATCCACGTGCCGGCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS-3UTR CAA 90 bp TGGCAGGTCCAGCCAGTGTTCCTCAGCCGCGGCCTGGCTTCCACCCTGCGGTGGTTGCTAGGATGGCTGTaGAACTCCAAAGCTTCCCCG +
Preference number: 5 (lower is better)
Translates to: WQVQPVFLSRGLASTLRWLLGWL*NSKASP
Trigger: CGGGGAAGCTTTGGAGTTCAACAGCCATCCTAGCAA...CCACCGCAGGGTGGAAGCCAGGCCGCGGCTGAGGAACACTGGCTGGACCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp TGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGGCCAAGTGCACGGCTTaGGGCAGGAGGTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: CIRLMWLSRREGRGKLGLAKCTA*GRRLAG
Trigger: CCCTGCCAACCTCCTGCCCAAAGCCGTGCACTTGGC...CAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAGGAAACAGGCCTGGGTaGCCCCACTGCCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPGNRPG*PHCQLG
Trigger: CCCCAGCTGGCAGTGGGGCAACCCAGGCCTGTTTCC...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GCAGCCACACTAGTGGCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTACAGACGGTGAGCCTTaGCTGCTGCTGTCACTGCAG +
Preference number: 5 (lower is better)
Translates to: AATLVAGGSVGTREPGRLTDGEP*LLLSLQ
Trigger: CTGCAGTGACAGCAGCAGCAAAGGCTCACCGTCTGT...AAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGAAGACTGGAGGGGGACGAGGTTCAGGTaGGCCAAGTGCACGGCTTTG +
Preference number: 5 (lower is better)
Translates to: VGTREPGRLEDVSAEDWRGTRFR*AKCTAL
Trigger: CAAAGCCGTGCACTTGGCCAACCTGAACCTCGTCCC...CCTCCAGTCTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGGAAACAGGCCTGGGTaGCCCCACTGCCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASGNRPG*PHCQLG
Trigger: CCCCAGCTGGCAGTGGGGCAACCCAGGCCTGTTTCC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS GCA 90 bp TGGGAATTGCTGGTGGGGAGCTGGCAGCCACAGACGGTGAGCCTTTaGTGCTGCTGTCACTGCAGATGCTACGAGGGCTGTCCGATGGCT +
Preference number: 5 (lower is better)
Translates to: WELLVGSWQPQTVSL*CCCHCRCYEGCPMA
Trigger: AGCCATCGGACAGCCCTCGTAGCATCTGCAGTGACAGCAGCAGCAAAGGCTCACCGTCTGTGGCTGCCAGCTCCCCACCAGCAATTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 90 bp GGGGCTGCTGGTGCCGTGGAGTTCACAGGGGCCGACACGAACATTTaGTCCGCAGAGATAGGCTTCACCAGCAGCTGGGAACACTGCATG +
Preference number: 5 (lower is better)
Translates to: GAAGAVEFTGADTNI*SAEIGFTSSWEHCM
Trigger: CATGCAGTGTTCCCAGCTGCTGGTGAAGCCTATCTCTGCGGACCAAATGTTCGTGTCGGCCCCTGTGAACTCCACGGCACCAGCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS-3UTR CAA 90 bp GCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGAGCCCCGGAATCCATaGTGTAGGAGACTGGGAGTA +
Preference number: 5 (lower is better)
Translates to: AGGSVGTREPGRLEDVSAEPRNP*CRRLGV
Trigger: TACTCCCAGTCTCCTACACAATGGATTCCGGGGCTC...AGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GCAGCCACACTAGTGGCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTACGAGTCACTGGCCTTaGTCATGCTCTCGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: AATLVAGGSVGTREPGRLTSHWP*SCSRPL
Trigger: AAGGGGACGAGAGCATGACAAAGGCCAGTGACTCGT...AAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGCCACTAGTGTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GCTGGTGGCTCAGTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTAAGAAGAGCAGCGTCTaGGAGCACAGTGTGCACAGT +
Preference number: 5 (lower is better)
Translates to: AGGSVGTREPGRLEDVSAKKSSV*EHSVHS
Trigger: ACTGTGCACACTGTGCTCCAAGACGCTGCTCTTCTT...AGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCACTGAGCCACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGAAGACTGGAGGGGCCGACACGAACATTaGGTCCGCAGAGATAGGCTT +
Preference number: 5 (lower is better)
Translates to: VGTREPGRLEDVSAEDWRGRHEH*VRRDRL
Trigger: AAGCCTATCTCTGCGGACCAAATGTTCGTGTCGGCC...CCTCCAGTCTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGAAGACTGGAGGGAAGTGAGGCCATGTTaGGGAGAGGATGAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: VGTREPGRLEDVSAEDWREVRPC*GEDEGA
Trigger: AGCCCCTTCATCCTCTCCCAAACATGGCCTCACTTC...CCTCCAGTCTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp TGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGGTTGGGCAGCAGCATTaGGCATACCTGGCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: CIRLMWLSRREGRGKLGLVGQQH*AYLAGQ
Trigger: CTGACCTGCCAGGTATGCCAAATGCTGCTGCCCAAC...CAGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGGGGCACTCAGGGCACTaGAAGACGCCCACCTGCGTC +
Preference number: 5 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVGHSGH*KTPTCV
Trigger: GACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCC...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS CCA 90 bp CAGTGTCGCTCCTGGATGTGGCTTTTCAGCAAGGCCAAGGTCAGGTaGACGACACCACAGTGGATGCACCTTGCGGGCATAGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: QCRSWMWLFSKAKVR*TTPQWMHLAGIVQA
Trigger: TGCCTGCACTATGCCCGCAAGGTGCATCCACTGTGGTGTCGTCCACCTGACCTTGGCCTTGCTGAAAAGCCACATCCAGGAGCGACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTGTCTGGATGGCCTCCTaGGCATCAAGGCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFVWMAS*ASRLVG
Trigger: CCCCACCAGCCTTGATGCCAAGGAGGCCATCCAGAC...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp ATGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTTGGCGGCTGGTGTTCTaGACAATGACACTCACGGCC +
Preference number: 5 (lower is better)
Translates to: MHKADVALQKGGPRKAGAWRLVF*TMTLTA
Trigger: GGCCGTGAGTGTCATTGTCAAGAACACCAGCCGCCA...AGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCATCCCGGGCAAGCCCCTaGGACTCTCCAATACTGTTG +
Preference number: 5 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPSRASP*DSPILL
Trigger: CAACAGTATTGGAGAGTCCAAGGGGCTTGCCCGGGA...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ATGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTGCCCTGAGAGATCCTTaGTGTGGCCAGGCTGATCCT +
Preference number: 5 (lower is better)
Translates to: MHKADVALQKGGPRKAGAALRDP*CGQADP
Trigger: AGGATCAGCCTGGCCACACAAAGGATCTCTCAGGGC...AGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACGGCTCCGGGGACTCTTaGGTGACTTGGGCATTTTGG +
Preference number: 5 (lower is better)
Translates to: STLFPLLHYILLGATPCHGSGDS*VTWAFW
Trigger: CCAAAATGCCCAAGTCACCAAAGAGTCCCCGGAGCC...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTGGCTCCGGGGACTCTTaGGTGACTTGGGCATTTTGG +
Preference number: 5 (lower is better)
Translates to: HEQEWALRALEDAHLRLAGSGDS*VTWAFW
Trigger: CCAAAATGCCCAAGTCACCAAAGAGTCCCCGGAGCC...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTGGGGGCTCCCTGAATTaGTGCCTGCCTCAGGAAAGT +
Preference number: 5 (lower is better)
Translates to: HEQEWALRALEDAHLRLAGGSLN*CLPQES
Trigger: ACTTTCCTGAGGCAGGCACAAATTCAGGGAGCCCCC...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAACGAGCCCCTTGCTCTaGTGGTCACGGGCGTGCCGG +
Preference number: 5 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPTSPLL*WSRACR
Trigger: CCGGCACGCCCGTGACCACAAGAGCAAGGGGCTCGT...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACGTTGGGCAGCAGCATTaGGCATACCTGGCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: STLFPLLHYILLGATPCHVGQQH*AYLAGQ
Trigger: CTGACCTGCCAGGTATGCCAAATGCTGCTGCCCAAC...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ATGCATAAGGCTGATGTGGCTCTCCAGAAGGGAGGGCCGAGGAAAGCTGGGGCTTTGTTGCGGATGTGTTaGCGCAGGCTGTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: MHKADVALQKGGPRKAGALLRMC*RRLLGV
Trigger: CACCCCCAACAGCCTGCGCAAACACATCCGCAACAA...AGCCCCAGCTTTCCTCGGCCCTCCCTTCTGGAGAGCCACATCAGCCTTATGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACTTGTTGCGGATGTGTTaGCGCAGGCTGTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: STLFPLLHYILLGATPCHLLRMC*RRLLGV
Trigger: CACCCCCAACAGCCTGCGCAAACACATCCGCAACAA...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS GCA 90 bp AGTAGGGGGACTTGTGTGCATGAATCCGCTGGTGGGCACAGAAACTaGACTGGTTGGGCAGCAGCATTTGGCATACCTGGCAGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: SRGTCVHESAGGHRN*TGWAAAFGIPGRSA
Trigger: GGCTGACCTGCCAGGTATGCCAAATGCTGCTGCCCAACCAGTGCAGTTTCTGTGCCCACCAGCGGATTCATGCACACAAGTCCCCCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 90 bp ATGCCTGGAGGTTTGAGGGGACTCTCATTCTCCTCACTGGGTGTCTaGATGGCCTCCTTGGCATCAAGGCTGGTGGGGTCTGGGATGTCA +
Preference number: 5 (lower is better)
Translates to: MPGGLRGLSFSSLGV*MASLASRLVGSGMS
Trigger: TGACATCCCAGACCCCACCAGCCTTGATGCCAAGGAGGCCATCCAGACACCCAGTGAGGAGAATGAGAGTCCCCTCAAACCTCCAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 90 bp AGCCTCCAGGACTGGGCCTCCCACAGCCCCGCACCCAAGAGGGGGTaGGAAATAACTGTCAGAGTGTTTGGGCTTTATCCCAAATCCGTT +
Preference number: 5 (lower is better)
Translates to: SLQDWASHSPAPKRG*EITVRVFGLYPKSV
Trigger: AACGGATTTGGGATAAAGCCCAAACACTCTGACAGTTATTTCCCACCCCCTCTTGGGTGCGGGGCTGTGGGAGGCCCAGTCCTGGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS-3UTR CAA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAATTGGGAGGCTCCAGTTaGCCAGGGAAACTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GFLCPVPKAPVASVGEGELGGSS*PGKLLA
Trigger: TGCCAGGAGTTTCCCTGGCAAACTGGAGCCTCCCAA...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAATCCCGGGCAAGCCCCTaGGACTCTCCAATACTGTTG +
Preference number: 5 (lower is better)
Translates to: GFLCPVPKAPVASVGEGESRASP*DSPILL
Trigger: CAACAGTATTGGAGAGTCCAAGGGGCTTGCCCGGGA...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACACACTAGCCACTCTTTaGGCCTGCAAGGCCACCAAG +
Preference number: 5 (lower is better)
Translates to: STLFPLLHYILLGATPCHTLATL*ACKATK
Trigger: CTTGGTGGCCTTGCAGGCCAAAAGAGTGGCTAGTGT...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GTGGGAACTCGAGAGCCAGGGCGGCTTGAGGATGTGTCCGCTGAAGACTGGAGGGGTGACTTGGGCATTTaGGGGCTACCTTTAGAACTC +
Preference number: 5 (lower is better)
Translates to: VGTREPGRLEDVSAEDWRGDLGI*GLPLEL
Trigger: GAGTTCTAAAGGTAGCCCCAAAATGCCCAAGTCACC...CCTCCAGTCTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTCGAGTTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCACAGACGGTGAGCCTTaGCTGCTGCTGTCACTGCAG +
Preference number: 5 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASTDGEP*LLLSLQ
Trigger: CTGCAGTGACAGCAGCAGCAAAGGCTCACCGTCTGT...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAACGAGTCACTGGCCTTaGTCATGCTCTCGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPTSHWP*SCSRPL
Trigger: AAGGGGACGAGAGCATGACAAAGGCCAGTGACTCGT...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTGGGACGAGGTTCAGGTaGGCCAAGTGCACGGCTTTG +
Preference number: 5 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAGTRFR*AKCTAL
Trigger: CAAAGCCGTGCACTTGGCCAACCTGAACCTCGTCCC...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGGGACGAGGTTCAGGTaGGCCAAGTGCACGGCTTTG +
Preference number: 5 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHGTRFR*AKCTAL
Trigger: CAAAGCCGTGCACTTGGCCAACCTGAACCTCGTCCC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAACAGGGGCACCGACATTaGTGTAAGCTGTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEQGHRH*CKLWLA
Trigger: AGCCAGCCACAGCTTACACAAATGTCGGTGCCCCTG...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAGGCCGACACGAACATTaGGTCCGCAGAGATAGGCTT +
Preference number: 5 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPGRHEH*VRRDRL
Trigger: AAGCCTATCTCTGCGGACCAAATGTTCGTGTCGGCC...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAGAAGTGAGGCCATGTTaGGGAGAGGATGAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPEVRPC*GEDEGA
Trigger: AGCCCCTTCATCCTCTCCCAAACATGGCCTCACTTC...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAATTGTTGCGGATGTGTTaGCGCAGGCTGTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: GFLCPVPKAPVASVGEGELLRMC*RRLLGV
Trigger: CACCCCCAACAGCCTGCGCAAACACATCCGCAACAA...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAAGGGTGTGGCGAGCGTaGCTAGGGGAGCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPRVWRA*LGEQSC
Trigger: GCAGCTCTGCTCCCCTAGCAACGCTCGCCACACCCT...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560079.7
CDS GCA 90 bp ACCAGGGGCACCGACATTTGTGTAAGCTGTGGCTGGCTCCGTCTTTaGACTGAAGACTTGGCTGTCACTGATGCAGCAACACTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: TRGTDICVSCGWLRL*TEDLAVTDAATLWG
Trigger: CCCCCACAGTGTTGCTGCATCAGTGACAGCCAAGTCTTCAGTGCAAAGACGGAGCCAGCCACAGCTTACACAAATGTCGGTGCCCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS-3UTR CAA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTCATATGCCTGGAGGTTaGAGGGGACTCTCATTCTCC +
Preference number: 5 (lower is better)
Translates to: HEQEWALRALEDAHLRLAHMPGG*RGLSFS
Trigger: GGAGAATGAGAGTCCCCTCAAACCTCCAGGCATATG...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGTGGCGGCTGGTGTTCTaGACAATGACACTCACGGCC +
Preference number: 5 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVWRLVF*TMTLTA
Trigger: GGCCGTGAGTGTCATTGTCAAGAACACCAGCCGCCA...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAGAGCCCCGGAATCCATaGTGTAGGAGACTGGGAGTA +
Preference number: 5 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEEPRNP*CRRLGV
Trigger: TACTCCCAGTCTCCTACACAATGGATTCCGGGGCTC...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGTTGGGAGGCTCCAGTTaGCCAGGGAAACTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLLGGSS*PGKLLA
Trigger: TGCCAGGAGTTTCCCTGGCAAACTGGAGCCTCCCAA...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GACGTGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCATGTGTTCTGCCCACTTaGCTCGTGTTCCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: DVLHQLRLLHEQEWALRACVLPT*LVFLLA
Trigger: AGCCAGCAGGAACACGAGCAAAGTGGGCAGAACACA...TGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTTCCCGGGCAAGCCCCTaGGACTCTCCAATACTGTTG +
Preference number: 5 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFSRASP*DSPILL
Trigger: CAACAGTATTGGAGAGTCCAAGGGGCTTGCCCGGGA...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGGCCCTGAGAGATCCTTaGTGTGGCCAGGCTGATCCT +
Preference number: 5 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVALRDP*CGQADP
Trigger: AGGATCAGCCTGGCCACACAAAGGATCTCTCAGGGC...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGGATGTGTCCGCTGAAGACTGGAGGCTTGACAGCTCGTCCACATTTCGGGGAACAGGGGCACCGACATTaGTGTAAGCTGTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: RMCPLKTGGLTARPHFGEQGHRH*CKLWLA
Trigger: AGCCAGCCACAGCTTACACAAATGTCGGTGCCCCTG...TTCCCCGAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACACATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAAAGAAGAGCAGCGTCTaGGAGCACAGTGTGCACAGT +
Preference number: 5 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPKKSSV*EHSVHS
Trigger: ACTGTGCACACTGTGCTCCAAGACGCTGCTCTTCTT...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAGAAGTGAGGCCATGTTaGGGAGAGGATGAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEEVRPC*GEDEGA
Trigger: AGCCCCTTCATCCTCTCCCAAACATGGCCTCACTTC...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAAGGGCACTCAGGGCACTaGAAGACGCCCACCTGCGTC +
Preference number: 5 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQGHSGH*KTPTCV
Trigger: GACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCC...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACCTGAAGACTGGAGGCTaGACAGCTCGTCCACATTTC +
Preference number: 5 (lower is better)
Translates to: STLFPLLHYILLGATPCHLKTGG*TARPHF
Trigger: GAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAG...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTGGCTCAAATCAGGGTTTCTGATGCCATGCATAAGGCTGATGTGGCTCTCCAGGAGAGCCAGGGCGGCTaGAGGATGTGTCCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LAQIRVSDAMHKADVALQESQGG*RMCPLK
Trigger: CTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTC...CTGGAGAGCCACATCAGCCTTATGCATGGCATCAGAAACCCTGATTTGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGAGAGCCAGGGCGGCTaGAGGATGTGTCCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPESQGG*RMCPLK
Trigger: CTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTC...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CAGCTCGTCCACATTTCGGGGAACACCGTGGGTGCTCTTGACGTGTTGCATCAATGTTTGCGCAGGCTGTaGGGGGTGTGGAAGGACTGT +
Preference number: 5 (lower is better)
Translates to: QLVHISGNTVGALDVLHQCLRRL*GVWKDC
Trigger: ACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACA...TTGATGCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGTGTTTGCGCAGGCTGTaGGGGGTGTGGAAGGACTGT +
Preference number: 5 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVCLRRL*GVWKDC
Trigger: ACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACA...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACACTGTGTCATGGTTGTaGCGGATGTGTTTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: STLFPLLHYILLGATPCHTVSWL*RMCLRR
Trigger: CCTGCGCAAACACATCCGCAACAACCATGACACAGT...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTGGGGCCAGGCTCACTaGGAGAGGAATACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAWGQAH*ERNTRA
Trigger: GGCTCTTGTATTCCTCTCCAAGTGAGCCTGGCCCCA...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS CCA 90 bp AGCTCCCGGGCAAGCCCCTTGGACTCTCCAATACTGTTGCTAGGATaGCTGTTGAACTCCAAAGCTTCCCCGAAGAATCGAGTGGCATCC +
Preference number: 5 (lower is better)
Translates to: SSRASPLDSPILLLG*LLNSKASPKNRVAS
Trigger: GGATGCCACTCGATTCTTCGGGGAAGCTTTGGAGTTCAACAGCCATCCTAGCAACAGTATTGGAGAGTCCAAGGGGCTTGCCCGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 90 bp TTCACCTGGTGGACCAGGGGCACCGACATTTGTGTAAGCTGTGGCTaGCTCCGTCTTTGCACTGAAGACTTGGCTGTCACTGATGCAGCA +
Preference number: 5 (lower is better)
Translates to: FTWWTRGTDICVSCG*LRLCTEDLAVTDAA
Trigger: TGCTGCATCAGTGACAGCCAAGTCTTCAGTGCAAAGACGGAGCCAGCCACAGCTTACACAAATGTCGGTGCCCCTGGTCCACCAGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS-3UTR CAA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAAGTCTGGATGGCCTCCTaGGCATCAAGGCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQVWMAS*ASRLVG
Trigger: CCCCACCAGCCTTGATGCCAAGGAGGCCATCCAGAC...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAATTGCTAGGATGGCTGTaGAACTCCAAAGCTTCCCCG +
Preference number: 5 (lower is better)
Translates to: GFLCPVPKAPVASVGEGELLGWL*NSKASP
Trigger: CGGGGAAGCTTTGGAGTTCAACAGCCATCCTAGCAA...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACACACTAGCCACTCTTTaGGCCTGCAAGGCCACCAAG +
Preference number: 5 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHTLATL*ACKATK
Trigger: CTTGGTGGCCTTGCAGGCCAAAAGAGTGGCTAGTGT...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GACGTGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCAGGGCTGTCCGATGGCTaGATACTTTTTCTAGTGGCC +
Preference number: 5 (lower is better)
Translates to: DVLHQLRLLHEQEWALRAGLSDG*ILFLVA
Trigger: GGCCACTAGAAAAAGTATCAAGCCATCGGACAGCCC...TGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp CACGAACAAGAGTGGGCACTCAGGGCACTTGAAGACGCCCACCTGCGTCTTGCTCAACAGGGGACTTACTaGGATCATCAGGATCTGGCA +
Preference number: 5 (lower is better)
Translates to: HEQEWALRALEDAHLRLAQQGTY*DHQDLA
Trigger: TGCCAGATCCTGATGATCCAAGTAAGTCCCCTGTTG...AGCAAGACGCAGGTGGGCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGGGTGCTCTTGACGTGTaGCATCAACTCCGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLGALDV*HQLRLL
Trigger: CAGAAGCCGGAGTTGATGCAACACGTCAAGAGCACC...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGGTGCTCTTGACGTGTaGCATCAACTCCGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHGALDV*HQLRLL
Trigger: CAGAAGCCGGAGTTGATGCAACACGTCAAGAGCACC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTACACCGTGGGTGCTCTaGACGTGTTGCATCAACTCC +
Preference number: 5 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKATPWVL*TCCINS
Trigger: GGAGTTGATGCAACACGTCAAGAGCACCCACGGTGT...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ACTGTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGACACCGTGGGTGCTCTaGACGTGTTGCATCAACTCC +
Preference number: 5 (lower is better)
Translates to: TVSWLLRMCLRRLLGVWKTPWVL*TCCINS
Trigger: GGAGTTGATGCAACACGTCAAGAGCACCCACGGTGT...CTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp CTGCTCCTCGTGCTTGGGTGGGCCCTGACTCCACCATCAGTGAAAAGACAGCCAAGGGAAGTGGCAGCCTaGCCAGGAAGAGCAATTATT +
Preference number: 5 (lower is better)
Translates to: LLLVLGWALTPPSVKRQPREVAA*PGRAII
Trigger: AATAATTGCTCTTCCTGGCAAGGCTGCCACTTCCCT...TGGCTGTCTTTTCACTGATGGTGGAGTCAGGGCCCACCCAAGCACGAGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGGGTCTAGGTCTGGCTTaGCAGGTAGCTGGAAACAGG +
Preference number: 5 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVGLGLA*QVAGNR
Trigger: CCTGTTTCCAGCTACCTGCAAAGCCAGACCTAGACC...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAACAGTGGTTGACAGGCTaGACTCAGCACCATCACTAC +
Preference number: 5 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEQWLTG*TQHHHY
Trigger: GTAGTGATGGTGCTGAGTCAAGCCTGTCAACCACTG...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGGGGAAGGCAAAGTGTaGAGCTTACTGGGCCACAAT +
Preference number: 5 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASGEGKV*SLLGHN
Trigger: ATTGTGGCCCAGTAAGCTCAACACTTTGCCTTCCCC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS TCA 90 bp AACTCCAAAGCTTCCCCGAAGAATCGAGTGGCATCCGGATCCTTGTaGGGTTCCACTGTGTTCTGCCCACTTTGCTCGTGTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: NSKASPKNRVASGSL*GSTVFCPLCSCSCW
Trigger: CCAGCAGGAACACGAGCAAAGTGGGCAGAACACAGTGGAACCTCACAAGGATCCGGATGCCACTCGATTCTTCGGGGAAGCTTTGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS TCA 90 bp GAACTCTCTTTAGTGGGCCCTGAGAGATCCTTTGTGTGGCCAGGCTaGTCCTCCTTAGTGACACTAGCCACTCTTTTGGCCTGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: ELSLVGPERSFVWPG*SSLVTLATLLACKA
Trigger: GGCCTTGCAGGCCAAAAGAGTGGCTAGTGTCACTAAGGAGGATCAGCCTGGCCACACAAAGGATCTCTCAGGGCCCACTAAAGAGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 90 bp AGGAGACTGGGAGTAATGTGGTCTTTCTCCGCTTCAAATGACTCCTaGCGGCTGGTGTTCTTGACAATGACACTCACGGCCGGCACATCG +
Preference number: 5 (lower is better)
Translates to: RRLGVMWSFSASNDS*RLVFLTMTLTAGTS
Trigger: CGATGTGCCGGCCGTGAGTGTCATTGTCAAGAACACCAGCCGCCAGGAGTCATTTGAAGCGGAGAAAGACCACATTACTCCCAGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 90 bp CAGAATGCACATTTGTGGAAAACCTGGCAGTGTCGCTCCTGGATGTaGCTTTTCAGCAAGGCCAAGGTCAGGTGGACGACACCACAGTGG +
Preference number: 5 (lower is better)
Translates to: QNAHLWKTWQCRSWM*LFSKAKVRWTTPQW
Trigger: CCACTGTGGTGTCGTCCACCTGACCTTGGCCTTGCTGAAAAGCCACATCCAGGAGCGACACTGCCAGGTTTTCCACAAATGTGCATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS-3UTR CAA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCATGGCGGCTGGTGTTCTaGACAATGACACTCACGGCC +
Preference number: 5 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPWRLVF*TMTLTA
Trigger: GGCCGTGAGTGTCATTGTCAAGAACACCAGCCGCCA...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTCATGTGGGACACGTAGCACACTAGCCACTCTTTaGGCCTGCAAGGCCACCAAG +
Preference number: 5 (lower is better)
Translates to: MGTASMSDRGSFSCGTRSTLATL*ACKATK
Trigger: CTTGGTGGCCTTGCAGGCCAAAAGAGTGGCTAGTGT...GCTACGTGTCCCACATGAAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGGGCTGTCCGATGGCTaGATACTTTTTCTAGTGGCC +
Preference number: 5 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHGLSDG*ILFLVA
Trigger: GGCCACTAGAAAAAGTATCAAGCCATCGGACAGCCC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGGGGCTCCCTGAATTaGTGCCTGCCTCAGGAAAGT +
Preference number: 5 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPGGSLN*CLPQES
Trigger: ACTTTCCTGAGGCAGGCACAAATTCAGGGAGCCCCC...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGGCCAAGTGCACGGCTTaGGGCAGGAGGTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWAKCTA*GRRLAG
Trigger: CCCTGCCAACCTCCTGCCCAAAGCCGTGCACTTGGC...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCACACTGCCTTTGCACTGAAGACTaGGCTGTCACTGATGCAGCA +
Preference number: 5 (lower is better)
Translates to: LRMCLRRLLGVWKDCSHCLCTED*AVTDAA
Trigger: TGCTGCATCAGTGACAGCCAAGTCTTCAGTGCAAAG...GCAGTGTGAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACAAGAAGAGCAGCGTCTaGGAGCACAGTGTGCACAGT +
Preference number: 5 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHKKSSV*EHSVHS
Trigger: ACTGTGCACACTGTGCTCCAAGACGCTGCTCTTCTT...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCTGAAGACTGGAGGCTaGACAGCTCGTCCACATTTC +
Preference number: 5 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVLKTGG*TARPHF
Trigger: GAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ACTGTGTCATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGCTGAAGACTGGAGGCTaGACAGCTCGTCCACATTTC +
Preference number: 5 (lower is better)
Translates to: TVSWLLRMCLRRLLGVWKLKTGG*TARPHF
Trigger: GAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAG...CTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCATGACACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGACTGTGTCATGGTTGTaGCGGATGTGTTTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVTVSWL*RMCLRR
Trigger: CCTGCGCAAACACATCCGCAACAACCATGACACAGT...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CAGCTCGTCCACATTTCGGGGAACACCGTGGGTGCTCTTGACGTGTTGCATCAAACTGTGTCATGGTTGTaGCGGATGTGTTTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: QLVHISGNTVGALDVLHQTVSWL*RMCLRR
Trigger: CCTGCGCAAACACATCCGCAACAACCATGACACAGT...TTGATGCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCAGGGAAGTGGCAGCCTaGCCAGGAAGAGCAATTATT +
Preference number: 5 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASREVAA*PGRAII
Trigger: AATAATTGCTCTTCCTGGCAAGGCTGCCACTTCCCT...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACCTAGAAGGTGCTGTCTaGGTCAGATCAGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHLEGAV*VRSDPE
Trigger: CTCAGGGTCTGATCTGACCAAGACAGCACCTTCTAG...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS TCA 90 bp GACCATGTAGTCCCGCATCTGCTTGTGACATTCAAGACACTTGATTaGGTACCGGATGAGCCTCACAGGGTCTGGGTAGAGTGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: DHVVPHLLVTFKTLD*VPDEPHRVWVEWQG
Trigger: GCCTTGCCACTCTACCCAGACCCTGTGAGGCTCATCCGGTACTCAATCAAGTGTCTTGAATGTCACAAGCAGATGCGGGACTACATGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS-3UTR CAA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACCCAAATCCGTTATCTTaGATGGGATCCTCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: STLFPLLHYILLGATPCHPNPLS*MGSSGS
Trigger: AGAACCTGAGGATCCCATCAAAGATAACGGATTTGG...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCGGCAGGGGTTCTGGCTaGGGTTCTTTCTTACAAAAA +
Preference number: 5 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASGRGSG*GSFLQK
Trigger: TTTTTGTAAGAAAGAACCCAAGCCAGAACCCCTGCC...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGCTTCCTGTGCCCAGTTCCTAAGGCTCCGGTGGCATCTGTTGGAGAAGGTGAAGGCAGGGGTTCTGGCTaGGGTTCTTTCTTACAAAAA +
Preference number: 5 (lower is better)
Translates to: GFLCPVPKAPVASVGEGEGRGSG*GSFLQK
Trigger: TTTTTGTAAGAAAGAACCCAAGCCAGAACCCCTGCC...TTCACCTTCTCCAACAGATGCCACCGGAGCCTTAGGAACTGGGCACAGGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGGGTGACTTGGGCATTTaGGGGCTACCTTTAGAACTC +
Preference number: 5 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVGDLGI*GLPLEL
Trigger: GAGTTCTAAAGGTAGCCCCAAAATGCCCAAGTCACC...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACCTTTGCACTGAAGACTaGGCTGTCACTGATGCAGCA +
Preference number: 5 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHLCTED*AVTDAA
Trigger: TGCTGCATCAGTGACAGCCAAGTCTTCAGTGCAAAG...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCTTTACTGTGTCATGGTaGTTGCGGATGTGTTTGCGC +
Preference number: 5 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASFTVSW*LRMCLR
Trigger: GCGCAAACACATCCGCAACAACCATGACACAGTAAA...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAATGGGGCCAGGCTCACTaGGAGAGGAATACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQWGQAH*ERNTRA
Trigger: GGCTCTTGTATTCCTCTCCAAGTGAGCCTGGCCCCA...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGATCTTGGAGGTGACTaGACCATTGTGGAGCCGCTC +
Preference number: 5 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPDLGGD*TIVEPL
Trigger: GAGCGGCTCCACAATGGTCAAGTCACCTCCAAGATC...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCCTGTCAAAGCAGCCTaGGTCACTAACGAGCACAGT +
Preference number: 5 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVPVKAA*VTNEHS
Trigger: ACTGTGCTCGTTAGTGACCAAGGCTGCTTTGACAGG...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTAGAAGGTGCTGTCTaGGTCAGATCAGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVLEGAV*VRSDPE
Trigger: CTCAGGGTCTGATCTGACCAAGACAGCACCTTCTAG...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS TCA 90 bp TTGACAATGACACTCACGGCCGGCACATCGGGGGCTGATCCTGAGTaGGACAAGGACACACTTTCATCCATACATATGCCTGGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: LTMTLTAGTSGADPE*DKDTLSSIHMPGGL
Trigger: CAAACCTCCAGGCATATGTATGGATGAAAGTGTGTCCTTGTCTCACTCAGGATCAGCCCCCGATGTGCCGGCCGTGAGTGTCATTGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 90 bp AGATCTGAGCCCCGGAATCCATTGTGTAGGAGACTGGGAGTAATGTaGTCTTTCTCCGCTTCAAATGACTCCTGGCGGCTGGTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: RSEPRNPLCRRLGVM*SFSASNDSWRLVFL
Trigger: CAAGAACACCAGCCGCCAGGAGTCATTTGAAGCGGAGAAAGACCACATTACTCCCAGTCTCCTACACAATGGATTCCGGGGCTCAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 90 bp TCTTTGATGGGATCCTCAGGTTCTGGGCTGGAGATTGGACTGAACTaGTTGAAGGTGGGTAATGGCTCTGACTTGGGAGGCTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: SLMGSSGSGLEIGLN*LKVGNGSDLGGSSL
Trigger: CAAACTGGAGCCTCCCAAGTCAGAGCCATTACCCACCTTCAACCAGTTCAGTCCAATCTCCAGCCCAGAACCTGAGGATCCCATCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS-3UTR CAA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTATTGGACTGAACTGGTaGAAGGTGGGTAATGGCTCT +
Preference number: 5 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKAIGLNW*KVGNGS
Trigger: AGAGCCATTACCCACCTTCAACCAGTTCAGTCCAAT...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTATTGGACTGAACTGGTaGAAGGTGGGTAATGGCTCT +
Preference number: 5 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFIGLNW*KVGNGS
Trigger: AGAGCCATTACCCACCTTCAACCAGTTCAGTCCAAT...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGATTGGACTGAACTGGTaGAAGGTGGGTAATGGCTCT +
Preference number: 5 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVIGLNW*KVGNGS
Trigger: AGAGCCATTACCCACCTTCAACCAGTTCAGTCCAAT...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGGATGTGTCCGCTGAAGACTGGAGGCTTGACAGCTCGTCCACATTTCGGGGAAGGCAGGGGTTCTGGCTaGGGTTCTTTCTTACAAAAA +
Preference number: 5 (lower is better)
Translates to: RMCPLKTGGLTARPHFGEGRGSG*GSFLQK
Trigger: TTTTTGTAAGAAAGAACCCAAGCCAGAACCCCTGCC...TTCCCCGAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACACATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGGACTCTCCAATACTGTaGCTAGGATGGCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVDSPIL*LGWLLN
Trigger: GTTCAACAGCCATCCTAGCAACAGTATTGGAGAGTC...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CAGCTCGTCCACATTTCGGGGAACACCGTGGGTGCTCTTGACGTGTTGCATCAAGACTCTCCAATACTGTaGCTAGGATGGCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: QLVHISGNTVGALDVLHQDSPIL*LGWLLN
Trigger: GTTCAACAGCCATCCTAGCAACAGTATTGGAGAGTC...TTGATGCAACACGTCAAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTGGTGACTTGGGCATTTaGGGGCTACCTTTAGAACTC +
Preference number: 5 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVGDLGI*GLPLEL
Trigger: GAGTTCTAAAGGTAGCCCCAAAATGCCCAAGTCACC...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTGGCTCAAATCAGGGTTTCTGATGCCATGCATAAGGCTGATGTGGCTCTCCAGGGACTCTTTGGTGACTaGGGCATTTTGGGGCTACCT +
Preference number: 5 (lower is better)
Translates to: LAQIRVSDAMHKADVALQGLFGD*GILGLP
Trigger: AGGTAGCCCCAAAATGCCCAAGTCACCAAAGAGTCC...CTGGAGAGCCACATCAGCCTTATGCATGGCATCAGAAACCCTGATTTGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp TGTTGCATCAACTCCGGCTTCTGCACGAACAAGAGTGGGCACTCAGGGCACTTGGTTTTGATTCTCACTTaGGGAATTGCTGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: CCINSGFCTNKSGHSGHLVLILT*GIAGGE
Trigger: CTCCCCACCAGCAATTCCCAAAGTGAGAATCAAAAC...CAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAGAAGCCGGAGTTGATGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp TTTCGAAATGTCAACGGTGTGATGCTCGAGGCCCTCCTTGGGGTGACAAGGCACGTTTTGATTCTCACTTaGGGAATTGCTGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: FRNVNGVMLEALLGVTRHVLILT*GIAGGE
Trigger: CTCCCCACCAGCAATTCCCAAAGTGAGAATCAAAAC...GTGCCTTGTCACCCCAAGGAGGGCCTCGAGCATCACACCGTTGACATTTCGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ATGGTTGTTGCGGATGTGTTTGCGCAGGCTGTTGGGGGTGTGGAAGGACTGTTCCTTGTGACAGTCCGTTaGATTTCCCCTGATGATGTC +
Preference number: 5 (lower is better)
Translates to: MVVADVFAQAVGGVEGLFLVTVR*ISPDDV
Trigger: GACATCATCAGGGGAAATCAAACGGACTGTCACAAG...GAACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACACATCCGCAACAACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp CATACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTCTTGTGACAGTCCGTTaGATTTCCCCTGATGATGTC +
Preference number: 5 (lower is better)
Translates to: HTWDLRPSLNFFLQGPKALVTVR*ISPDDV
Trigger: GACATCATCAGGGGAAATCAAACGGACTGTCACAAG...AGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATCAGGGGCACCGACATTaGTGTAAGCTGTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYQGHRH*CKLWLA
Trigger: AGCCAGCCACAGCTTACACAAATGTCGGTGCCCCTG...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAAGGTGCTCTTGACGTGTaGCATCAACTCCGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQGALDV*HQLRLL
Trigger: CAGAAGCCGGAGTTGATGCAACACGTCAAGAGCACC...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTGTTCACACTGCCGGCATGGGTACCGCTTCAATGTCCGACCGTGGCTCTTTTTTTTACTGTGTCATGGTaGTTGCGGATGTGTTTGCGC +
Preference number: 5 (lower is better)
Translates to: LFTLPAWVPLQCPTVALFFTVSW*LRMCLR
Trigger: GCGCAAACACATCCGCAACAACCATGACACAGTAAA...AAAAAGAGCCACGGTCGGACATTGAAGCGGTACCCATGCCGGCAGTGTGAACAG
52% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCACCTGTCAAAGCAGCCTaGGTCACTAACGAGCACAGT +
Preference number: 5 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPPVKAA*VTNEHS
Trigger: ACTGTGCTCGTTAGTGACCAAGGCTGCTTTGACAGG...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGGGAAGGCAAAGTGTaGAGCTTACTGGGCCACAAT +
Preference number: 5 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPGEGKV*SLLGHN
Trigger: ATTGTGGCCCAGTAAGCTCAACACTTTGCCTTCCCC...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCACTCCGGTGGCATCTGTaGGAGAAGGTGAACAGTATC +
Preference number: 5 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPLRWHL*EKVNSI
Trigger: GATACTGTTCACCTTCTCCAACAGATGCCACCGGAG...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GTTCTCCCTCAGAGATGGGACAAACAGGGGAAGTCTGGGAAAGACCCTTGGGTGCTTCTCCCTTCCTTCTaGCCTATTAAACTCTCCGCT +
Preference number: 5 (lower is better)
Translates to: VLPQRWDKQGKSGKDPWVLLPSF*PIKLSA
Trigger: AGCGGAGAGTTTAATAGGCAAGAAGGAAGGGAGAAG...CACCCAAGGGTCTTTCCCAGACTTCCCCTGTTTGTCCCATCTCTGAGGGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560079.7
CDS TCA 90 bp AGTGAGACAAGGACACACTTTCATCCATACATATGCCTGGAGGTTTaGGGGGACTCTCATTCTCCTCACTGGGTGTCTGGATGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: SETRTHFHPYICLEV*GDSHSPHWVSGWPP
Trigger: AGGAGGCCATCCAGACACCCAGTGAGGAGAATGAGAGTCCCCTCAAACCTCCAGGCATATGTATGGATGAAAGTGTGTCCTTGTCTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS TCA 90 bp CTTGGGCATTTTGGGGCTACCTTTAGAACTCTCTTTAGTGGGCCCTaGGAGATCCTTTGTGTGGCCAGGCTGATCCTCCTTAGTGACACT +
Preference number: 5 (lower is better)
Translates to: LGHFGATFRTLFSGP*EILCVARLILLSDT
Trigger: AGTGTCACTAAGGAGGATCAGCCTGGCCACACAAAGGATCTCTCAGGGCCCACTAAAGAGAGTTCTAAAGGTAGCCCCAAAATGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS-3UTR CAA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAACATATGCCTGGAGGTTaGAGGGGACTCTCATTCTCC +
Preference number: 5 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQHMPGG*RGLSFS
Trigger: GGAGAATGAGAGTCCCCTCAAACCTCCAGGCATATG...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTGGCTCAAATCAGGGTTTCTGATGCCATGCATAAGGCTGATGTGGCTCTCCAGTCAAATTTCCCACAGTaGTGGGGATCTGGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: LAQIRVSDAMHKADVALQSNFPQ*WGSGGR
Trigger: TCTGCCTCCAGATCCCCACAACTGTGGGAAATTTGA...CTGGAGAGCCACATCAGCCTTATGCATGGCATCAGAAACCCTGATTTGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp AGGATGTGTCCGCTGAAGACTGGAGGCTTGACAGCTCGTCCACATTTCGGGGAACCAAATCCGTTATCTTaGATGGGATCCTCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: RMCPLKTGGLTARPHFGEPNPLS*MGSSGS
Trigger: AGAACCTGAGGATCCCATCAAAGATAACGGATTTGG...TTCCCCGAAATGTGGACGAGCTGTCAAGCCTCCAGTCTTCAGCGGACACATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS-3UTR CAA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTGACTCTCCAATACTGTaGCTAGGATGGCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVDSPIL*LGWLLN
Trigger: GTTCAACAGCCATCCTAGCAACAGTATTGGAGAGTC...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATACGAGTCACTGGCCTTaGTCATGCTCTCGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYTSHWP*SCSRPL
Trigger: AAGGGGACGAGAGCATGACAAAGGCCAGTGACTCGT...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGGTTGGGCAGCAGCATTaGGCATACCTGGCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWVGQQH*AYLAGQ
Trigger: CTGACCTGCCAGGTATGCCAAATGCTGCTGCCCAAC...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS CCA 90 bp TGGCTTGGGTTCTTTCTTACAAAAATGATCAAACATATGCAGCTCTaGAACCGGAAACTTAGCCAGAGCCTCCAGGACTGGGCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: WLGFFLTKMIKHMQL*NRKLSQSLQDWASH
Trigger: GTGGGAGGCCCAGTCCTGGAGGCTCTGGCTAAGTTTCCGGTTCCAGAGCTGCATATGTTTGATCATTTTTGTAAGAAAGAACCCAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS-3UTR CAA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGGAGCCCCGGAATCCATaGTGTAGGAGACTGGGAGTA +
Preference number: 5 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWEPRNP*CRRLGV
Trigger: TACTCCCAGTCTCCTACACAATGGATTCCGGGGCTC...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAATCAAATTTCCCACAGTaGTGGGGATCTGGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQSNFPQ*WGSGGR
Trigger: TCTGCCTCCAGATCCCCACAACTGTGGGAAATTTGA...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAACGAGCCCCTTGCTCTaGTGGTCACGGGCGTGCCGG +
Preference number: 5 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKTSPLL*WSRACR
Trigger: CCGGCACGCCCGTGACCACAAGAGCAAGGGGCTCGT...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGAGAGCCAGGGCGGCTaGAGGATGTGTCCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKESQGG*RMCPLK
Trigger: CTTCAGCGGACACATCCTCAAGCCGCCCTGGCTCTC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCATTTACTGTGTCATGGTaGTTGCGGATGTGTTTGCGC +
Preference number: 5 (lower is better)
Translates to: DPGFPGTGSAFFQLTFFPFTVSW*LRMCLR
Trigger: GCGCAAACACATCCGCAACAACCATGACACAGTAAA...TGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGCACCCTCTTCCCTTTACTCCACTACATCCTGCTGGGCGCAACCCCATGCCACATTTCCACTAAAAACTaGGCATTTGATAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: STLFPLLHYILLGATPCHISTKN*AFDRGE
Trigger: TTCCCCTCTATCAAATGCCAAGTTTTTAGTGGAAAT...GTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGAGTAAAGGGAAGAGGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATCAGTGGTTGACAGGCTaGACTCAGCACCATCACTAC +
Preference number: 5 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYQWLTG*TQHHHY
Trigger: GTAGTGATGGTGCTGAGTCAAGCCTGTCAACCACTG...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ACTTGGGACCTGCGTCCTAGTCTCAACTTTTTCCTCCAGGGGCCCAAGGCTTCCTGTGCAGATAAACGCTaGTTACAGCAAGCATTTTCT +
Preference number: 5 (lower is better)
Translates to: TWDLRPSLNFFLQGPKASCADKR*LQQAFS
Trigger: AGAAAATGCTTGCTGTAACAAGCGTTTATCTGCACA...GGAAGCCTTGGGCCCCTGGAGGAAAAAGTTGAGACTAGGACGCAGGTCCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAAGTTTTGATTCTCACTTaGGGAATTGCTGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQVLILT*GIAGGE
Trigger: CTCCCCACCAGCAATTCCCAAAGTGAGAATCAAAAC...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAGCCAAGTGCACGGCTTaGGGCAGGAGGTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKAKCTA*GRRLAG
Trigger: CCCTGCCAACCTCCTGCCCAAAGCCGTGCACTTGGC...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGCTCCGGTGGCATCTGTaGGAGAAGGTGAACAGTATC +
Preference number: 5 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWLRWHL*EKVNSI
Trigger: GATACTGTTCACCTTCTCCAACAGATGCCACCGGAG...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS CCA 90 bp GCACTGTCTCCATTCATAAAAGTAGAATCAAATTTCCCACAGTTGTaGGGATCTGGAGGCAGATCTGAGCCCCGGAATCCATTGTGTAGG +
Preference number: 5 (lower is better)
Translates to: ALSPFIKVESNFPQL*GSGGRSEPRNPLCR
Trigger: CCTACACAATGGATTCCGGGGCTCAGATCTGCCTCCAGATCCCCACAACTGTGGGAAATTTGATTCTACTTTTATGAATGGAGACAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS-3UTR CAA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAGTCTGGATGGCCTCCTaGGCATCAAGGCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLVWMAS*ASRLVG
Trigger: CCCCACCAGCCTTGATGCCAAGGAGGCCATCCAGAC...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGCCCTGAGAGATCCTTaGTGTGGCCAGGCTGATCCT +
Preference number: 5 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKALRDP*CGQADP
Trigger: AGGATCAGCCTGGCCACACAAAGGATCTCTCAGGGC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGGGGGCTCCCTGAATTaGTGCCTGCCTCAGGAAAGT +
Preference number: 5 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKGGSLN*CLPQES
Trigger: ACTTTCCTGAGGCAGGCACAAATTCAGGGAGCCCCC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATCTGGCTTTGCACTGAAGACTaGGCTGTCACTGATGCAGCA +
Preference number: 5 (lower is better)
Translates to: WLSIFPTHVLPRKEMYIWLCTED*AVTDAA
Trigger: TGCTGCATCAGTGACAGCCAAGTCTTCAGTGCAAAG...CCAGATATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGTGTGTTCTGCCCACTTaGCTCGTGTTCCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKCVLPT*LVFLLA
Trigger: AGCCAGCAGGAACACGAGCAAAGTGGGCAGAACACA...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGGCCGACACGAACATTaGGTCCGCAGAGATAGGCTT +
Preference number: 5 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKGRHEH*VRRDRL
Trigger: AAGCCTATCTCTGCGGACCAAATGTTCGTGTCGGCC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGGCCAGGACCCAGGTTTTCCAGGGACTGGCTCAGCATTTTTCCAACTCACGTTAGCTGTAGCTACCAATaGAATCAGATTCATTCATTC +
Preference number: 5 (lower is better)
Translates to: RPGPRFSRDWLSIFPTHVSCSYQ*NQIHSF
Trigger: GAATGAATGAATCTGATTCAATTGGTAGCTACAGCT...AACGTGAGTTGGAAAAATGCTGAGCCAGTCCCTGGAAAACCTGGGTCCTGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATTGGGAGGCTCCAGTTaGCCAGGGAAACTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLLGGSS*PGKLLA
Trigger: TGCCAGGAGTTTCCCTGGCAAACTGGAGCCTCCCAA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGGACTCTTTGGTGACTaGGGCATTTTGGGGCTACCT +
Preference number: 5 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKGLFGD*GILGLP
Trigger: AGGTAGCCCCAAAATGCCCAAGTCACCAAAGAGTCC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGGGCTGTCCGATGGCTaGATACTTTTTCTAGTGGCC +
Preference number: 5 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKGLSDG*ILFLVA
Trigger: GGCCACTAGAAAAAGTATCAAGCCATCGGACAGCCC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAACAGACGGTGAGCCTTaGCTGCTGCTGTCACTGCAG +
Preference number: 5 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLTDGEP*LLLSLQ
Trigger: CTGCAGTGACAGCAGCAGCAAAGGCTCACCGTCTGT...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATGTTTGCGCAGGCTGTaGGGGGTGTGGAAGGACTGT +
Preference number: 5 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLCLRRL*GVWKDC
Trigger: ACAGTCCTTCCACACCCCCAACAGCCTGCGCAAACA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATGTGTTCTGCCCACTTaGCTCGTGTTCCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLCVLPT*LVFLLA
Trigger: AGCCAGCAGGAACACGAGCAAAGTGGGCAGAACACA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGCAACAGGGGACTTACTaGGATCATCAGGATCTGGCA +
Preference number: 5 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKQQGTY*DHQDLA
Trigger: TGCCAGATCCTGATGATCCAAGTAAGTCCCCTGTTG...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAAGGTCTAGGTCTGGCTTaGCAGGTAGCTGGAAACAGG +
Preference number: 5 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKGLGLA*QVAGNR
Trigger: CCTGTTTCCAGCTACCTGCAAAGCCAGACCTAGACC...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp GGGAACTGTGTGTTCCCTGTGAGGGTTAGGCAACCTTTTCTAGACAGTCCTCAAAGCTGTAGCTACCAATaGAATCAGATTCATTCATTC +
Preference number: 5 (lower is better)
Translates to: GNCVFPVRVRQPFLDSPQSCSYQ*NQIHSF
Trigger: GAATGAATGAATCTGATTCAATTGGTAGCTACAGCT...TTGAGGACTGTCTAGAAAAGGTTGCCTAACCCTCACAGGGAACACACAGTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTATTGCTAGGATGGCTGTaGAACTCCAAAGCTTCCCCG +
Preference number: 5 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLLLGWL*NSKASP
Trigger: CGGGGAAGCTTTGGAGTTCAACAGCCATCCTAGCAA...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTAGGACTCTTTGGTGACTaGGGCATTTTGGGGCTACCT +
Preference number: 5 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLGLFGD*GILGLP
Trigger: AGGTAGCCCCAAAATGCCCAAGTCACCAAAGAGTCC...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp AGGGACTGGCTCAGCATTTTTCCAACTCACGTTCTTCCCAGGAAGGAGATGTATATTTCCACTAAAAACTaGGCATTTGATAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: RDWLSIFPTHVLPRKEMYISTKN*AFDRGE
Trigger: TTCCCCTCTATCAAATGCCAAGTTTTTAGTGGAAAT...ATACATCTCCTTCCTGGGAAGAACGTGAGTTGGAAAAATGCTGAGCCAGTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAATCAAATTTCCCACAGTaGTGGGGATCTGGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKSNFPQ*WGSGGR
Trigger: TCTGCCTCCAGATCCCCACAACTGTGGGAAATTTGA...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAACAACAGGGGACTTACTaGGATCATCAGGATCTGGCA +
Preference number: 5 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKQQGTY*DHQDLA
Trigger: TGCCAGATCCTGATGATCCAAGTAAGTCCCCTGTTG...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp TGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGAAACTTGTGACAGTCCGTTaGATTTCCCCTGATGATGTC +
Preference number: 5 (lower is better)
Translates to: CGSSDAVRNKKPLECYKKLVTVR*ISPDDV
Trigger: GACATCATCAGGGGAAATCAAACGGACTGTCACAAG...TTTCTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp ATCTTTGTGAGGATTAAAGGAGAGAATCACCAGAAAGTGTTCAGTAAGATGCTACCAAATCCGTTATCTTaGATGGGATCCTCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: IFVRIKGENHQKVFSKMLPNPLS*MGSSGS
Trigger: AGAACCTGAGGATCCCATCAAAGATAACGGATTTGG...TAGCATCTTACTGAACACTTTCTGGTGATTCTCTCCTTTAATCCTCACAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGTGTGCAGATAAACGCTaGTTACAGCAAGCATTTTCT +
Preference number: 5 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKCADKR*LQQAFS
Trigger: AGAAAATGCTTGCTGTAACAAGCGTTTATCTGCACA...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS-3UTR CAA 90 bp CTCTGTGGCAGTAGCGATGCTGTAAGAAATAAGAAACCTCTTGAATGCTATAAGGTATACCCTTTTGTATaGTGGAATGTCTTACCATGT +
Preference number: 5 (lower is better)
Translates to: LCGSSDAVRNKKPLECYKVYPFV*WNVLPC
Trigger: ACATGGTAAGACATTCCACAATACAAAAGGGTATAC...CTTATAGCATTCAAGAGGTTTCTTATTTCTTACAGCATCGCTACTGCCACAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299927.4
ENST00000560079.7
CDS TCA 72 bp TGGCCGGCACGTGGATCCTGCTGTCCGCAGGCGGGCTaGGATTTGGCGCATAGAGGGGCACGGGGTTGGAGC +
Preference number: 6 (lower is better)
Translates to: WPARGSCCPQAG*DLAHRGARGWS
Trigger: GCTCCAACCCCGTGCCCCTCTATGCGCCAAATCTCAGCCCGCCTGCGGACAGCAGGATCCACGTGCCGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp CCACACTCCAGGCAGCAGTACCCACTGGCCGGCACGTaGATCCTGCTGTCCGCAGGCGGGCTGAGATTTGGC +
Preference number: 6 (lower is better)
Translates to: PHSRQQYPLAGT*ILLSAGGLRFG
Trigger: GCCAAATCTCAGCCCGCCTGCGGACAGCAGGATCCACGTGCCGGCCAGTGGGTACTGCTGCCTGGAGTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp CAAATGCGTCTCCACACTCCAGGCAGCAGTACCCACTaGCCGGCACGTGGATCCTGCTGTCCGCAGGCGGGC +
Preference number: 6 (lower is better)
Translates to: QMRLHTPGSSTH*PARGSCCPQAG
Trigger: GCCCGCCTGCGGACAGCAGGATCCACGTGCCGGCCAGTGGGTACTGCTGCCTGGAGTGTGGAGACGCATTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp TCAGGTTGGCCAAGTGCACGGCTTTGGGCAGGAGGTTaGCAGGGGCCAGGGTGGATGCCTGCAGTGCTGTGC +
Preference number: 6 (lower is better)
Translates to: SGWPSARLWAGG*QGPGWMPAVLC
Trigger: GCACAGCACTGCAGGCATCCACCCTGGCCCCTGCCAACCTCCTGCCCAAAGCCGTGCACTTGGCCAACCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS GCA 72 bp GTGGGGAGCTGGCAGCCACAGACGGTGAGCCTTTGCTaGTGCTGTCACTGCAGATGCTACGAGGGCTGTCCG +
Preference number: 6 (lower is better)
Translates to: VGSWQPQTVSLC*CCHCRCYEGCP
Trigger: CGGACAGCCCTCGTAGCATCTGCAGTGACAGCAGCAGCAAAGGCTCACCGTCTGTGGCTGCCAGCTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 90 bp TTGGCTGTCACTGATGCAGCAACACTGTGGGGGACGAGGTTCAGGTaGGCCAAGTGCACGGCTTTGGGCAGGAGGTTGGCAGGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: LAVTDAATLWGTRFR*AKCTALGRRLAGAR
Trigger: CCTGGCCCCTGCCAACCTCCTGCCCAAAGCCGTGCACTTGGCCAACCTGAACCTCGTCCCCCACAGTGTTGCTGCATCAGTGACAGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS TCA 72 bp CTTTGGGACCCGGGGCCCAGAACTGCAGCTGGGAGATaGCGAGTCACTGGCCTTTGTCATGCTCTCGTCCCC +
Preference number: 6 (lower is better)
Translates to: LWDPGPRTAAGR*RVTGLCHALVP
Trigger: GGGGACGAGAGCATGACAAAGGCCAGTGACTCGTCATCTCCCAGCTGCAGTTCTGGGCCCCGGGTCCCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS GCA 72 bp CTGGTGGGGAGCTGGCAGCCACAGACGGTGAGCCTTTaGTGCTGCTGTCACTGCAGATGCTACGAGGGCTGT +
Preference number: 6 (lower is better)
Translates to: LVGSWQPQTVSL*CCCHCRCYEGC
Trigger: ACAGCCCTCGTAGCATCTGCAGTGACAGCAGCAGCAAAGGCTCACCGTCTGTGGCTGCCAGCTCCCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 90 bp TTGGGAATTGCTGGTGGGGAGCTGGCAGCCACAGACGGTGAGCCTTaGCTGCTGCTGTCACTGCAGATGCTACGAGGGCTGTCCGATGGC +
Preference number: 6 (lower is better)
Translates to: LGIAGGELAATDGEP*LLLSLQMLRGLSDG
Trigger: GCCATCGGACAGCCCTCGTAGCATCTGCAGTGACAGCAGCAGCAAAGGCTCACCGTCTGTGGCTGCCAGCTCCCCACCAGCAATTCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS GCA 72 bp GGTTCCACTGTGTTCTGCCCACTTTGCTCGTGTTCCTaGTGGCTCCCCAAGGGCAGGGGTTCTGGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: GSTVFCPLCSCS*WLPKGRGSGLG
Trigger: ACCCAAGCCAGAACCCCTGCCCTTGGGGAGCCAGCAGGAACACGAGCAAAGTGGGCAGAACACAGTGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp CTGATGCAGCAACACTGTGGGGGACGAGGTTCAGGTTaGCCAAGTGCACGGCTTTGGGCAGGAGGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: LMQQHCGGRGSG*PSARLWAGGWQ
Trigger: CTGCCAACCTCCTGCCCAAAGCCGTGCACTTGGCCAACCTGAACCTCGTCCCCCACAGTGTTGCTGCATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp CATATCCCCCATGGCTGGATGCTGGCAAGGGCTGACTaGTATCCGTGGCAGGTAGGGACCTCCTCTTTCGGC +
Preference number: 6 (lower is better)
Translates to: HIPHGWMLARAD*YPWQVGTSSFG
Trigger: GCCGAAAGAGGAGGTCCCTACCTGCCACGGATACCAGTCAGCCCTTGCCAGCATCCAGCCATGGGGGATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559607.1
ENST00000560079.7
CDS CAA 72 bp CGGATCCTTGTGAGGTTCCACTGTGTTCTGCCCACTTaGCTCGTGTTCCTGCTGGCTCCCCAAGGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: RILVRFHCVLPT*LVFLLAPQGQG
Trigger: CCCCTGCCCTTGGGGAGCCAGCAGGAACACGAGCAAAGTGGGCAGAACACAGTGGAACCTCACAAGGATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 90 bp TGGGGCTGCTGGTGCCGTGGAGTTCACAGGGGCCGACACGAACATTaGGTCCGCAGAGATAGGCTTCACCAGCAGCTGGGAACACTGCAT +
Preference number: 6 (lower is better)
Translates to: WGCWCRGVHRGRHEH*VRRDRLHQQLGTLH
Trigger: ATGCAGTGTTCCCAGCTGCTGGTGAAGCCTATCTCTGCGGACCAAATGTTCGTGTCGGCCCCTGTGAACTCCACGGCACCAGCAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp GACTGGGCCTCCCACAGCCCCGCACCCAAGAGGGGGTaGGAAATAACTGTCAGAGTGTTTGGGCTTTATCCC +
Preference number: 6 (lower is better)
Translates to: DWASHSPAPKRG*EITVRVFGLYP
Trigger: GGGATAAAGCCCAAACACTCTGACAGTTATTTCCCACCCCCTCTTGGGTGCGGGGCTGTGGGAGGCCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp TCCACTGTGTTCTGCCCACTTTGCTCGTGTTCCTGCTaGCTCCCCAAGGGCAGGGGTTCTGGCTTGGGTTCT +
Preference number: 6 (lower is better)
Translates to: STVFCPLCSCSC*LPKGRGSGLGS
Trigger: AGAACCCAAGCCAGAACCCCTGCCCTTGGGGAGCCAGCAGGAACACGAGCAAAGTGGGCAGAACACAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp GGTGCCGTGGAGTTCACAGGGGCCGACACGAACATTTaGTCCGCAGAGATAGGCTTCACCAGCAGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: GAVEFTGADTNI*SAEIGFTSSWE
Trigger: TTCCCAGCTGCTGGTGAAGCCTATCTCTGCGGACCAAATGTTCGTGTCGGCCCCTGTGAACTCCACGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 72 bp TGGTGCCGTGGAGTTCACAGGGGCCGACACGAACATTaGGTCCGCAGAGATAGGCTTCACCAGCAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: WCRGVHRGRHEH*VRRDRLHQQLG
Trigger: TCCCAGCTGCTGGTGAAGCCTATCTCTGCGGACCAAATGTTCGTGTCGGCCCCTGTGAACTCCACGGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 90 bp TTGAGGGGACTCTCATTCTCCTCACTGGGTGTCTGGATGGCCTCCTaGGCATCAAGGCTGGTGGGGTCTGGGATGTCAAAGGCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: LRGLSFSSLGVWMAS*ASRLVGSGMSKAAR
Trigger: TCTGGCTGCCTTTGACATCCCAGACCCCACCAGCCTTGATGCCAAGGAGGCCATCCAGACACCCAGTGAGGAGAATGAGAGTCCCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp GGTTTGAGGGGACTCTCATTCTCCTCACTGGGTGTCTaGATGGCCTCCTTGGCATCAAGGCTGGTGGGGTCT +
Preference number: 6 (lower is better)
Translates to: GLRGLSFSSLGV*MASLASRLVGS
Trigger: AGACCCCACCAGCCTTGATGCCAAGGAGGCCATCCAGACACCCAGTGAGGAGAATGAGAGTCCCCTCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 72 bp TTCTCCGCTTCAAATGACTCCTGGCGGCTGGTGTTCTaGACAATGACACTCACGGCCGGCACATCGGGGGCT +
Preference number: 6 (lower is better)
Translates to: FSASNDSWRLVF*TMTLTAGTSGA
Trigger: AGCCCCCGATGTGCCGGCCGTGAGTGTCATTGTCAAGAACACCAGCCGCCAGGAGTCATTTGAAGCGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 90 bp ATGTGGTCTTTCTCCGCTTCAAATGACTCCTGGCGGCTGGTGTTCTaGACAATGACACTCACGGCCGGCACATCGGGGGCTGATCCTGAG +
Preference number: 6 (lower is better)
Translates to: MWSFSASNDSWRLVF*TMTLTAGTSGADPE
Trigger: CTCAGGATCAGCCCCCGATGTGCCGGCCGTGAGTGTCATTGTCAAGAACACCAGCCGCCAGGAGTCATTTGAAGCGGAGAAAGACCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 90 bp GTGGCCTCCAGAGGGCTCCGGGGACTCTTTGGTGACTTGGGCATTTaGGGGCTACCTTTAGAACTCTCTTTAGTGGGCCCTGAGAGATCC +
Preference number: 6 (lower is better)
Translates to: VASRGLRGLFGDLGI*GLPLELSLVGPERS
Trigger: GGATCTCTCAGGGCCCACTAAAGAGAGTTCTAAAGGTAGCCCCAAAATGCCCAAGTCACCAAAGAGTCCCCGGAGCCCTCTGGAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp TCTCATTCTCCTCACTGGGTGTCTGGATGGCCTCCTTaGCATCAAGGCTGGTGGGGTCTGGGATGTCAAAGG +
Preference number: 6 (lower is better)
Translates to: SHSPHWVSGWPP*HQGWWGLGCQR
Trigger: CCTTTGACATCCCAGACCCCACCAGCCTTGATGCCAAGGAGGCCATCCAGACACCCAGTGAGGAGAATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp TCTCCGCTCCTTAGAGAGGATCTCAAAACAAGGGTGTaGCGAGCGTTGCTAGGGGAGCAGAGCTGCGGAGAA +
Preference number: 6 (lower is better)
Translates to: SPLLREDLKTRV*RALLGEQSCGE
Trigger: TTCTCCGCAGCTCTGCTCCCCTAGCAACGCTCGCCACACCCTTGTTTTGAGATCCTCTCTAAGGAGCGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560079.7
CDS CCA 72 bp TCCTGGATGTGGCTTTTCAGCAAGGCCAAGGTCAGGTaGACGACACCACAGTGGATGCACCTTGCGGGCATA +
Preference number: 6 (lower is better)
Translates to: SWMWLFSKAKVR*TTPQWMHLAGI
Trigger: TATGCCCGCAAGGTGCATCCACTGTGGTGTCGTCCACCTGACCTTGGCCTTGCTGAAAAGCCACATCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559607.1
CDS CAA 72 bp CTCTCATTCTCCTCACTGGGTGTCTGGATGGCCTCCTaGGCATCAAGGCTGGTGGGGTCTGGGATGTCAAAG +
Preference number: 6 (lower is better)
Translates to: LSFSSLGVWMAS*ASRLVGSGMSK
Trigger: CTTTGACATCCCAGACCCCACCAGCCTTGATGCCAAGGAGGCCATCCAGACACCCAGTGAGGAGAATGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 72 bp CTGTCACTGCAGATGCTACGAGGGCTGTCCGATGGCTaGATACTTTTTCTAGTGGCCTCCAGAGGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: LSLQMLRGLSDG*ILFLVASRGLR
Trigger: CCGGAGCCCTCTGGAGGCCACTAGAAAAAGTATCAAGCCATCGGACAGCCCTCGTAGCATCTGCAGTGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 72 bp GTAAGCTGTGGCTGGCTCCGTCTTTGCACTGAAGACTaGGCTGTCACTGATGCAGCAACACTGTGGGGGACG +
Preference number: 6 (lower is better)
Translates to: VSCGWLRLCTED*AVTDAATLWGT
Trigger: CGTCCCCCACAGTGTTGCTGCATCAGTGACAGCCAAGTCTTCAGTGCAAAGACGGAGCCAGCCACAGCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 90 bp CGGGCAAGCCCCTTGGACTCTCCAATACTGTTGCTAGGATGGCTGTaGAACTCCAAAGCTTCCCCGAAGAATCGAGTGGCATCCGGATCC +
Preference number: 6 (lower is better)
Translates to: RASPLDSPILLLGWL*NSKASPKNRVASGS
Trigger: GGATCCGGATGCCACTCGATTCTTCGGGGAAGCTTTGGAGTTCAACAGCCATCCTAGCAACAGTATTGGAGAGTCCAAGGGGCTTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 90 bp TTGCTGCTGCTGTCACTGCAGATGCTACGAGGGCTGTCCGATGGCTaGATACTTTTTCTAGTGGCCTCCAGAGGGCTCCGGGGACTCTTT +
Preference number: 6 (lower is better)
Translates to: LLLLSLQMLRGLSDG*ILFLVASRGLRGLF
Trigger: AAAGAGTCCCCGGAGCCCTCTGGAGGCCACTAGAAAAAGTATCAAGCCATCGGACAGCCCTCGTAGCATCTGCAGTGACAGCAGCAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS TCA 72 bp GCTTCCCCGAAGAATCGAGTGGCATCCGGATCCTTGTaGGGTTCCACTGTGTTCTGCCCACTTTGCTCGTGT +
Preference number: 6 (lower is better)
Translates to: ASPKNRVASGSL*GSTVFCPLCSC
Trigger: ACACGAGCAAAGTGGGCAGAACACAGTGGAACCTCACAAGGATCCGGATGCCACTCGATTCTTCGGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS GCA 72 bp ACTTGTGTGCATGAATCCGCTGGTGGGCACAGAAACTaGACTGGTTGGGCAGCAGCATTTGGCATACCTGGC +
Preference number: 6 (lower is better)
Translates to: TCVHESAGGHRN*TGWAAAFGIPG
Trigger: GCCAGGTATGCCAAATGCTGCTGCCCAACCAGTGCAGTTTCTGTGCCCACCAGCGGATTCATGCACACAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp GGATCCTCAGGTTCTGGGCTGGAGATTGGACTGAACTaGTTGAAGGTGGGTAATGGCTCTGACTTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: GSSGSGLEIGLN*LKVGNGSDLGG
Trigger: GCCTCCCAAGTCAGAGCCATTACCCACCTTCAACCAGTTCAGTCCAATCTCCAGCCCAGAACCTGAGGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp GCTGCTGTCACTGCAGATGCTACGAGGGCTGTCCGATaGCTTGATACTTTTTCTAGTGGCCTCCAGAGGGCT +
Preference number: 6 (lower is better)
Translates to: AAVTADATRAVR*LDTFSSGLQRA
Trigger: AGCCCTCTGGAGGCCACTAGAAAAAGTATCAAGCCATCGGACAGCCCTCGTAGCATCTGCAGTGACAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp GCTGTGAAGGACCTTGTTGAAGACCTCTACAATCAGTaGGGCAGCCTTTTTCACCTGGTGGACCAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: AVKDLVEDLYNQ*GSLFHLVDQGH
Trigger: GTGCCCCTGGTCCACCAGGTGAAAAAGGCTGCCCCACTGATTGTAGAGGTCTTCAACAAGGTCCTTCACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 72 bp TCCTCAGGTTCTGGGCTGGAGATTGGACTGAACTGGTaGAAGGTGGGTAATGGCTCTGACTTGGGAGGCTCC +
Preference number: 6 (lower is better)
Translates to: SSGSGLEIGLNW*KVGNGSDLGGS
Trigger: GGAGCCTCCCAAGTCAGAGCCATTACCCACCTTCAACCAGTTCAGTCCAATCTCCAGCCCAGAACCTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 72 bp ACTGATGAGCAGGTACCAAGCTCCCGGGCAAGCCCCTaGGACTCTCCAATACTGTTGCTAGGATGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: TDEQVPSSRASP*DSPILLLGWLL
Trigger: CAACAGCCATCCTAGCAACAGTATTGGAGAGTCCAAGGGGCTTGCCCGGGAGCTTGGTACCTGCTCATCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 90 bp CAGGTACCAAGCTCCCGGGCAAGCCCCTTGGACTCTCCAATACTGTaGCTAGGATGGCTGTTGAACTCCAAAGCTTCCCCGAAGAATCGA +
Preference number: 6 (lower is better)
Translates to: QVPSSRASPLDSPIL*LGWLLNSKASPKNR
Trigger: TCGATTCTTCGGGGAAGCTTTGGAGTTCAACAGCCATCCTAGCAACAGTATTGGAGAGTCCAAGGGGCTTGCCCGGGAGCTTGGTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 90 bp GACATTTGTGTAAGCTGTGGCTGGCTCCGTCTTTGCACTGAAGACTaGGCTGTCACTGATGCAGCAACACTGTGGGGGACGAGGTTCAGG +
Preference number: 6 (lower is better)
Translates to: DICVSCGWLRLCTED*AVTDAATLWGTRFR
Trigger: CCTGAACCTCGTCCCCCACAGTGTTGCTGCATCAGTGACAGCCAAGTCTTCAGTGCAAAGACGGAGCCAGCCACAGCTTACACAAATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS TCA 72 bp ACACTCACGGCCGGCACATCGGGGGCTGATCCTGAGTaGGACAAGGACACACTTTCATCCATACATATGCCT +
Preference number: 6 (lower is better)
Translates to: TLTAGTSGADPE*DKDTLSSIHMP
Trigger: AGGCATATGTATGGATGAAAGTGTGTCCTTGTCTCACTCAGGATCAGCCCCCGATGTGCCGGCCGTGAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp CCCCGGAATCCATTGTGTAGGAGACTGGGAGTAATGTaGTCTTTCTCCGCTTCAAATGACTCCTGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: PRNPLCRRLGVM*SFSASNDSWRL
Trigger: CAGCCGCCAGGAGTCATTTGAAGCGGAGAAAGACCACATTACTCCCAGTCTCCTACACAATGGATTCCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 72 bp TGGGGATCTGGAGGCAGATCTGAGCCCCGGAATCCATaGTGTAGGAGACTGGGAGTAATGTGGTCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: WGSGGRSEPRNP*CRRLGVMWSFS
Trigger: GGAGAAAGACCACATTACTCCCAGTCTCCTACACAATGGATTCCGGGGCTCAGATCTGCCTCCAGATCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS TCA 72 bp GTCCCGCATCTGCTTGTGACATTCAAGACACTTGATTaGGTACCGGATGAGCCTCACAGGGTCTGGGTAGAG +
Preference number: 6 (lower is better)
Translates to: VPHLLVTFKTLD*VPDEPHRVWVE
Trigger: CTCTACCCAGACCCTGTGAGGCTCATCCGGTACTCAATCAAGTGTCTTGAATGTCACAAGCAGATGCGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp AATGCACATTTGTGGAAAACCTGGCAGTGTCGCTCCTaGATGTGGCTTTTCAGCAAGGCCAAGGTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: NAHLWKTWQCRS*MWLFSKAKVRW
Trigger: CCACCTGACCTTGGCCTTGCTGAAAAGCCACATCCAGGAGCGACACTGCCAGGTTTTCCACAAATGTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS TCA 72 bp TTTGGGGCTACCTTTAGAACTCTCTTTAGTGGGCCCTaGGAGATCCTTTGTGTGGCCAGGCTGATCCTCCTT +
Preference number: 6 (lower is better)
Translates to: FGATFRTLFSGP*EILCVARLILL
Trigger: AAGGAGGATCAGCCTGGCCACACAAAGGATCTCTCAGGGCCCACTAAAGAGAGTTCTAAAGGTAGCCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp CCCAAATCCGTTATCTTTGATGGGATCCTCAGGTTCTaGGCTGGAGATTGGACTGAACTGGTTGAAGGTGGG +
Preference number: 6 (lower is better)
Translates to: PKSVIFDGILRF*AGDWTELVEGG
Trigger: CCCACCTTCAACCAGTTCAGTCCAATCTCCAGCCCAGAACCTGAGGATCCCATCAAAGATAACGGATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp GCAAGCCCCTTGGACTCTCCAATACTGTTGCTAGGATaGCTGTTGAACTCCAAAGCTTCCCCGAAGAATCGA +
Preference number: 6 (lower is better)
Translates to: ASPLDSPILLLG*LLNSKASPKNR
Trigger: TCGATTCTTCGGGGAAGCTTTGGAGTTCAACAGCCATCCTAGCAACAGTATTGGAGAGTCCAAGGGGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 72 bp CCCTTGGACTCTCCAATACTGTTGCTAGGATGGCTGTaGAACTCCAAAGCTTCCCCGAAGAATCGAGTGGCA +
Preference number: 6 (lower is better)
Translates to: PLDSPILLLGWL*NSKASPKNRVA
Trigger: TGCCACTCGATTCTTCGGGGAAGCTTTGGAGTTCAACAGCCATCCTAGCAACAGTATTGGAGAGTCCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS TCA 72 bp AGGACACACTTTCATCCATACATATGCCTGGAGGTTTaGGGGGACTCTCATTCTCCTCACTGGGTGTCTGGA +
Preference number: 6 (lower is better)
Translates to: RTHFHPYICLEV*GDSHSPHWVSG
Trigger: TCCAGACACCCAGTGAGGAGAATGAGAGTCCCCTCAAACCTCCAGGCATATGTATGGATGAAAGTGTGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS TCA 72 bp GAGACTGGGAGTAATGTGGTCTTTCTCCGCTTCAAATaGCTCCTGGCGGCTGGTGTTCTTGACAATGACACT +
Preference number: 6 (lower is better)
Translates to: ETGSNVVFLRFK*LLAAGVLDNDT
Trigger: AGTGTCATTGTCAAGAACACCAGCCGCCAGGAGTCATTTGAAGCGGAGAAAGACCACATTACTCCCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp GTGAGACAAGGACACACTTTCATCCATACATATGCCTaGAGGTTTGAGGGGACTCTCATTCTCCTCACTGGG +
Preference number: 6 (lower is better)
Translates to: VRQGHTFIHTYA*RFEGTLILLTG
Trigger: CCCAGTGAGGAGAATGAGAGTCCCCTCAAACCTCCAGGCATATGTATGGATGAAAGTGTGTCCTTGTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 90 bp AACTGGTTGAAGGTGGGTAATGGCTCTGACTTGGGAGGCTCCAGTTaGCCAGGGAAACTCCTGGCACTGTCTCCATTCATAAAAGTAGAA +
Preference number: 6 (lower is better)
Translates to: NWLKVGNGSDLGGSS*PGKLLALSPFIKVE
Trigger: TTCTACTTTTATGAATGGAGACAGTGCCAGGAGTTTCCCTGGCAAACTGGAGCCTCCCAAGTCAGAGCCATTACCCACCTTCAACCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS TCA 72 bp CAGAGTGTTTGGGCTTTATCCCAAATCCGTTATCTTTaGTGGGATCCTCAGGTTCTGGGCTGGAGATTGGAC +
Preference number: 6 (lower is better)
Translates to: QSVWALSQIRYL*WDPQVLGWRLD
Trigger: GTCCAATCTCCAGCCCAGAACCTGAGGATCCCATCAAAGATAACGGATTTGGGATAAAGCCCAAACACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CAA 72 bp TCAGAGTGTTTGGGCTTTATCCCAAATCCGTTATCTTaGATGGGATCCTCAGGTTCTGGGCTGGAGATTGGA +
Preference number: 6 (lower is better)
Translates to: SECLGFIPNPLS*MGSSGSGLEIG
Trigger: TCCAATCTCCAGCCCAGAACCTGAGGATCCCATCAAAGATAACGGATTTGGGATAAAGCCCAAACACTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7
CDS CCA 72 bp TTCTTTCTTACAAAAATGATCAAACATATGCAGCTCTaGAACCGGAAACTTAGCCAGAGCCTCCAGGACTGG +
Preference number: 6 (lower is better)
Translates to: FFLTKMIKHMQL*NRKLSQSLQDW
Trigger: CCAGTCCTGGAGGCTCTGGCTAAGTTTCCGGTTCCAGAGCTGCATATGTTTGATCATTTTTGTAAGAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299927.4
ENST00000559607.1
ENST00000560079.7