RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF589 (Homo sapiens)

Ensembl gene IDs: ENSG00000164048

Ensembl transcript IDs: ENST00000354698.8, ENST00000412564.5, ENST00000427617.6, ENST00000440261.6, ENST00000448461.5, ENST00000457782.5

Found 475 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATaGGCCCTGGAGTGTGAGGAGAGACAAATGGCTAAAGGCCCTGGC +
Preference number: 1 (lower is better)
Translates to: PQPKGVRQTVRTWAI*ALECEERQMAKGPG
Trigger: GCCAGGGCCTTTAGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR TCA 90 bp ACATCAAAGCCAAAGATCCAGGTTCAGGTCCAGGGGCAGGAGCCCTaGTCTTGGACTTCCCAGTTCCAGAACGTGAGGGTCCACGGCTTC +
Preference number: 1 (lower is better)
Translates to: TSKPKIQVQVQGQEP*SWTSQFQNVRVHGF
Trigger: GAAGCCGTGGACCCTCACGTTCTGGAACTGGGAAGTCCAAGATCAGGGCTCCTGCCCCTGGACCTGAACCTGGATCTTTGGCTTTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR TCA 90 bp AAGCAGGCTAACCTTGGGGATTCCCTGGAGATCAACCACTTCCAGTaGGAGGGAGTGGACAAAAGCCTCTGGACCAGCCATTCCTTCTCT +
Preference number: 1 (lower is better)
Translates to: KQANLGDSLEINHFQ*EGVDKSLWTSHSFS
Trigger: AGAGAAGGAATGGCTGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGGAATCCCCAAGGTTAGCCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR TCA 90 bp TTGGACTTCCCAGTTCCAGAACGTGAGGGTCCACGGCTTCATTCTTaGAGTCAGCAAGACCAAGAACCCACCAATTCCAGACACATTAGG +
Preference number: 1 (lower is better)
Translates to: LDFPVPEREGPRLHS*SQQDQEPTNSRHIR
Trigger: CCTAATGTGTCTGGAATTGGTGGGTTCTTGGTCTTGCTGACTTCAAGAATGAAGCCGTGGACCCTCACGTTCTGGAACTGGGAAGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR GCA 90 bp ATGAAGGTCACCTCCCTGTTTAAATTTCAGATCCAAGGTCCAAGATaGAGTTCCAAAGACGCGGGTGTTGGGCCATGTGCAAGGACCAAG +
Preference number: 1 (lower is better)
Translates to: MKVTSLFKFQIQGPR*SSKDAGVGPCARTK
Trigger: CTTGGTCCTTGCACATGGCCCAACACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGATCTGAAATTTAAACAGGGAGGTGACCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR TCA 90 bp CCTGGTAAAGGTGTCCCTCAGATTGTAGGGCTGGAGACTGAACTCTaGGTAAAATCTAAAGGTGGGGTAGGAGAGGAAACAGCAAAGGCT +
Preference number: 1 (lower is better)
Translates to: PGKGVPQIVGLETEL*VKSKGGVGEETAKA
Trigger: AGCCTTTGCTGTTTCCTCTCCTACCCCACCTTTAGATTTTACTCAGAGTTCAGTCTCCAGCCCTACAATCTGAGGGACACCTTTACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR CCA 90 bp AAAGGCCCTGGCACCATTCCTGGATGTAATTTAGCCACCCGAGCATaGCTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCT +
Preference number: 1 (lower is better)
Translates to: KGPGTIPGCNLATRA*LKHWVLRLEDLRGA
Trigger: AGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAGCCATGCTCGGGTGGCTAAATTACATCCAGGAATGGTGCCAGGGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR TCA 90 bp AAACAAGGCTTCTCCCTAAGCATTTCCGCTGGTGTGGCTGATGGCTaGCTTGTTGCTAAAATCACATCCTCACTCCTTGCACCTCTAAAG +
Preference number: 1 (lower is better)
Translates to: KQGFSLSISAGVADG*LVAKITSSLLAPLK
Trigger: CTTTAGAGGTGCAAGGAGTGAGGATGTGATTTTAGCAACAAGTCAGCCATCAGCCACACCAGCGGAAATGCTTAGGGAGAAGCCTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR TCA 90 bp GAAGTAGTCAGATGCAAAGACCATTCCTCCAAGGGGACCGTCACTTaGCACCTCTGCTCTCAGAAGTTAGATCTCTGTCATCTTCACATC +
Preference number: 1 (lower is better)
Translates to: EVVRCKDHSSKGTVT*HLCSQKLDLCHLHI
Trigger: GATGTGAAGATGACAGAGATCTAACTTCTGAGAGCAGAGGTGTCAAGTGACGGTCCCCTTGGAGGAATGGTCTTTGCATCTGACTACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR TCA 90 bp TTTAAGAATTGTAACACTCACCGTGAGGGTCCACGGCTTCATTCTTaGAGTCAGCAAGACCAAGAACCCACCAATTCCAGACACATTAGG +
Preference number: 1 (lower is better)
Translates to: FKNCNTHREGPRLHS*SQQDQEPTNSRHIR
Trigger: CCTAATGTGTCTGGAATTGGTGGGTTCTTGGTCTTGCTGACTTCAAGAATGAAGCCGTGGACCCTCACGGTGAGTGTTACAATTCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354698.8
ENST00000457782.5
3UTR TCA 90 bp TGGAAATTCTGTCTACTTCCTCAGAGCTTGCATTCTGGGCTGGACTaGGCTGTATCTCTAATATTCTGTTGCCTCCCCAAGAGCTTATTG +
Preference number: 1 (lower is better)
Translates to: WKFCLLPQSLHSGLD*AVSLIFCCLPKSLL
Trigger: CAATAAGCTCTTGGGGAGGCAACAGAATATTAGAGATACAGCTCAGTCCAGCCCAGAATGCAAGCTCTGAGGAAGTAGACAGAATTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR CCA 90 bp TCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATaGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGATC +
Preference number: 1 (lower is better)
Translates to: SIYKVQIMVLSPRYT*RSKSHVQDPRMIQI
Trigger: GATCTGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
3UTR CCA 90 bp CTCCATAATATTAGAATAGAGATGGTGTTTATCCAGCAGACTTTTTaGTATCCTGGTAGCACCTCAGTTGCTGTCCATCAATCTTCCAAT +
Preference number: 1 (lower is better)
Translates to: LHNIRIEMVFIQQTF*YPGSTSVAVHQSSN
Trigger: ATTGGAAGATTGATGGACAGCAACTGAGGTGCTACCAGGATACCAAAAAGTCTGCTGGATAAACACCATCTCTATTCTAATATTATGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412564.5
3UTR-3UTR TCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTAGAGGCACTGGGGCCTaGGTGGATAGCTCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: APAQGSKANCQNLGHMGPRGTGA*VDSSPR
Trigger: CCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTCT...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGCACTGGGGCCTGAGTaGATAGCTCTCCAAGGTACA +
Preference number: 2 (lower is better)
Translates to: APAQGSKANCQNLGHMGPALGPE*IALQGT
Trigger: TGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGC...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGCTAGATCCCTGTCATTaGAGGCCAAGGTGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGLDPCH*RPRWRG
Trigger: GCCACGCCACCTTGGCCTTCAATGACAGGGATCTAG...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGAGAGGCACTGGGGCCTaGGTGGATAGCTCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLRGTGA*VDSSPR
Trigger: CCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTCT...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGCACACTCCCCAAACGTaGCTGCTCCAAACCCTGGGG +
Preference number: 2 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLHTPQT*LLQTLG
Trigger: CCCCAGGGTTTGGAGCAGTCACGTTTGGGGAGTGTG...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR TCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTCCCGAGTGTGTCCTCTaGCACGTGACAAGTAATGAT +
Preference number: 2 (lower is better)
Translates to: APAQGSKANCQNLGHMGPPECVL*HVTSND
Trigger: ATCATTACTTGTCACGTGTCAGAGGACACACTCGGG...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGAAGGGGACCGTCACTTaGCACCTCTGCTCTCAGAAG +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGKGTVT*HLCSQK
Trigger: CTTCTGAGAGCAGAGGTGTCAAGTGACGGTCCCCTT...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTTTGAGCGACGACTTCTaGCTAAATCCATGCCCACAC +
Preference number: 2 (lower is better)
Translates to: APAQGSKANCQNLGHMGPLSDDF*LNPCPH
Trigger: GTGTGGGCATGGATTTAGCCAGAAGTCGTCGCTCAA...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTACCTTGGGGATTCCCTaGAGATCAACCACTTCCAGT +
Preference number: 2 (lower is better)
Translates to: APAQGSKANCQNLGHMGPTLGIP*RSTTSS
Trigger: ACTGGAAGTGGTTGATCTCCAGGGAATCCCCAAGGT...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGTGTGGCTGATGGCTaGCTTGTTGCTAAAATCACA +
Preference number: 2 (lower is better)
Translates to: APAQGSKANCQNLGHMGPGVADG*LVAKIT
Trigger: TGTGATTTTAGCAACAAGTCAGCCATCAGCCACACC...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGTCCAAAACAAGGGTCTaGCGCCTCCTTCCACTCGTT +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGSKTRV*RLLPLV
Trigger: AACGAGTGGAAGGAGGCGTCAGACCCTTGTTTTGGA...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGGCATTTCCGCTGGTGTaGCTGATGGCTGACTTGTTG +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGAFPLV*LMADLL
Trigger: CAACAAGTCAGCCATCAGCCACACCAGCGGAAATGC...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTGGGCCATATGGGCCCTaGAGTGTGAGGAGAGACAAA +
Preference number: 2 (lower is better)
Translates to: TVRTWAIWALECEERQMAGPYGP*SVRRDK
Trigger: TTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCC...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGGCCATATGGGCCCTaGAGTGTGAGGAGAGACAAA +
Preference number: 2 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLGPYGP*SVRRDK
Trigger: TTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCC...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCACTCTGTCCTCCAGGCTaGAGTGCAGCTGTACAAGCT +
Preference number: 2 (lower is better)
Translates to: PWRSTTSSEREWTKASGPLCPPG*SAAVQA
Trigger: AGCTTGTACAGCTGCACTCCAGCCTGGAGGACAGAG...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR-3UTR TCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGGTGTGTTCTCCGATGTaGTTTGAGCGACGACTTCTG +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGVCSPM*FERRLL
Trigger: CAGAAGTCGTCGCTCAAATCACATCGGAGAACACAC...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCAGTGGTAGTGGAGGGTTaGCTGAGCTATAAAGCCTCG +
Preference number: 2 (lower is better)
Translates to: PWRSTTSSEREWTKASGPVVVEG*LSYKAS
Trigger: CGAGGCTTTATAGCTCAGTCAACCCTCCACTACCAC...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGGTGGTAGTGGAGGGTTaGCTGAGCTATAAAGCCTCG +
Preference number: 2 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLVVVEG*LSYKAS
Trigger: CGAGGCTTTATAGCTCAGTCAACCCTCCACTACCAC...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGTCCTCCAGTGTCTGTTaGGGAGTATCTTCCGGCCAA +
Preference number: 2 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLSSSVC*GVSSGQ
Trigger: TTGGCCGGAAGATACTCCTCAACAGACACTGGAGGA...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGCTTACTCTCACTCCATaGAGGTTTCTCCCGAGTGTG +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGLTLTP*RFLPSV
Trigger: CACACTCGGGAGAAACCTTCATGGAGTGAGAGTAAG...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGTGGTTGCGGAGGACTaGCTCAACTATAAAGCCTCG +
Preference number: 2 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLVVAED*LNYKAS
Trigger: CGAGGCTTTATAGTTGAGTCAGTCCTCCGCAACCAC...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR GCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGTTCGTGATAAAGCCTTaGCCACACTCCGTGCATGCA +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGFVIKP*PHSVHA
Trigger: TGCATGCACGGAGTGTGGGCAAGGCTTTATCACGAA...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR GCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGAGATGTGAGCCACTGTaGCTGGCCCACAGTCTACAT +
Preference number: 2 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLRCEPL*LAHSLH
Trigger: ATGTAGACTGTGGGCCAGGCACAGTGGCTCACATCT...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR-3UTR GCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGTACTTCCTCAGAGCTTaGATTCTGGGCTGGACTGAG +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGYFLRA*ILGWTE
Trigger: CTCAGTCCAGCCCAGAATGCAAGCTCTGAGGAAGTA...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGAAGGCCAAGGTGGCGTaGCTATGTTTAAGTCCTGAG +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGKAKVA*LCLSPE
Trigger: CTCAGGACTTAAACATAGCCACGCCACCTTGGCCTT...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGTTAGCCACCCGAGCATaGCTAAAACACTGGGTACTG +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGLATRA*LKHWVL
Trigger: CAGTACCCAGTGTTTTAGCCATGCTCGGGTGGCTAA...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR CAA 90 bp CACTCCCCAAACGTGACTGCTCCAAACCCTGGGGTTTCTGCCCTCTaGGAAATTCTGTCTACTTCCTCAGAGCTTGCATTCTGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: HSPNVTAPNPGVSAL*EILSTSSELAFWAG
Trigger: TCCAGCCCAGAATGCAAGCTCTGAGGAAGTAGACAGAATTTCCAAGAGGGCAGAAACCCCAGGGTTTGGAGCAGTCACGTTTGGGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR TCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGGTGTGTGTTGAGACATaGTCTCCTTACAAAGCCTCG +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGVCVET*SPYKAS
Trigger: CGAGGCTTTGTAAGGAGATCATGTCTCAACACACAC...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGTGTGTTCTCCGATGTaGTTTGAGCGACGACTTCTG +
Preference number: 2 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLVCSPM*FERRLL
Trigger: CAGAAGTCGTCGCTCAAATCACATCGGAGAACACAC...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCAGTGTCCTCTGACACGTaGCAAGTAATGATGTCCACG +
Preference number: 2 (lower is better)
Translates to: PWRSTTSSEREWTKASGPVSSDT*QVMMST
Trigger: CGTGGACATCATTACTTGTCACGTGTCAGAGGACAC...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTCCCGAGTGTGTCCTCTaGCACGTGACAAGTAATGAT +
Preference number: 2 (lower is better)
Translates to: TVRTWAIWALECEERQMAPECVL*HVTSND
Trigger: ATCATTACTTGTCACGTGTCAGAGGACACACTCGGG...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACTTACTCTCACTCCATaGAGGTTTCTCCCGAGTGTG +
Preference number: 2 (lower is better)
Translates to: VRQTVRTWAIWALECEERLTLTP*RFLPSV
Trigger: CACACTCGGGAGAAACCTTCATGGAGTGAGAGTAAG...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCACCAAGGTACACTCATTaGCACAGGGTATCAGGTAGG +
Preference number: 2 (lower is better)
Translates to: PWRSTTSSEREWTKASGPPRYTH*HRVSGR
Trigger: CCTACCTGATACCCTGTGTCAATGAGTGTACCTTGG...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTATCAACCACTTCCAGTaGGAGGGAGTGGACAAAAGC +
Preference number: 2 (lower is better)
Translates to: TVRTWAIWALECEERQMAINHFQ*EGVDKS
Trigger: GCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGAT...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR GCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGAAACCCTGGGGTTTCTaGCCTCTTGGAAATTCTGTC +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGKPWGF*PLGNSV
Trigger: GACAGAATTTCCAAGAGGGCAGAAACCCCAGGGTTT...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR GCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGGTGTACTCAGGTGGTTaGGGAGGACTGACTCAACTA +
Preference number: 2 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLVYSGG*GGLTQL
Trigger: TAGTTGAGTCAGTCCTCCGCAACCACCTGAGTACAC...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGGGGGTGGGCGTACAGTaGATAGATTTGACTCCAAGT +
Preference number: 2 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLGVGVQ*IDLTPS
Trigger: ACTTGGAGTCAAATCTATCCACTGTACGCCCACCCC...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCACTCTTAGAACAAGAGTaGGGTGGGCGTACAGTGGAT +
Preference number: 2 (lower is better)
Translates to: PWRSTTSSEREWTKASGPLLEQE*GGRTVD
Trigger: ATCCACTGTACGCCCACCCCACTCTTGTTCTAAGAG...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGACCTTGGGGATTCCCTaGAGATCAACCACTTCCAGT +
Preference number: 2 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLTLGIP*RSTTSS
Trigger: ACTGGAAGTGGTTGATCTCCAGGGAATCCCCAAGGT...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGCCAAGAGCTTATTGGTaGTCTCTGGAACAGGCTAGA +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGPRAYW*SLEQAR
Trigger: TCTAGCCTGTTCCAGAGACCACCAATAAGCTCTTGG...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR TCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGGTGTGCGAGGAGAGTTaGTTTATCACAAAAGCCTCG +
Preference number: 2 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLVCEES*FITKAS
Trigger: CGAGGCTTTTGTGATAAATCAACTCTCCTCGCACAC...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGCTGGAGACTGAACTCTaGGTAAAATCTAAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGLETEL*VKSKGG
Trigger: CCCACCTTTAGATTTTACTCAGAGTTCAGTCTCCAG...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTCCACGGCTTCATTCTTaGAGTCAGCAAGACCAAGAA +
Preference number: 2 (lower is better)
Translates to: TVRTWAIWALECEERQMAPRLHS*SQQDQE
Trigger: TTCTTGGTCTTGCTGACTTCAAGAATGAAGCCGTGG...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGCCTCCTTCCACTCGTTaGTCTTCTGCTTCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWPPSTR*SSASAP
Trigger: GGGGGCTGAAGCAGAAGATCAACGAGTGGAAGGAGG...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR GCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGATTTCTCCTAAAGCTTTaGCCACACTCCACGCATGCA +
Preference number: 2 (lower is better)
Translates to: VRQTVRTWAIWALECEERFLLKL*PHSTHA
Trigger: TGCATGCGTGGAGTGTGGGCAAAGCTTTAGGAGAAA...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp CACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGATCCATTTGCAACCTCTGCCTCCTaGGCCCAAGTGAACCTCCTG +
Preference number: 2 (lower is better)
Translates to: HMEVQVPCPRPKNDSDPFATSAS*AQVNLL
Trigger: CAGGAGGTTCACTTGGGCCCAGGAGGCAGAGGTTGC...AAATGGATCTGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR-3UTR CCA 90 bp TCCCTGTTTAAATTTCAGATCCAAGGTCCAAGATGCAGTTCCAAAGACGCGGGTGCAACCTCTGCCTCCTaGGCCCAAGTGAACCTCCTG +
Preference number: 2 (lower is better)
Translates to: SLFKFQIQGPRCSSKDAGATSAS*AQVNLL
Trigger: CAGGAGGTTCACTTGGGCCCAGGAGGCAGAGGTTGC...ACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGATCTGAAATTTAAACAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR-3UTR CCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCACTTATTGGTGGTCTCTaGAACAGGCTAGAGAAACCC +
Preference number: 2 (lower is better)
Translates to: PWRSTTSSEREWTKASGPLIGGL*NRLEKP
Trigger: GGGTTTCTCTAGCCTGTTCCAGAGACCACCAATAAG...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR TCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGCTGGAGACTGAACTCTaGGTAAAATCTAAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLLETEL*VKSKGG
Trigger: CCCACCTTTAGATTTTACTCAGAGTTCAGTCTCCAG...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCTAGATCCCTGTCATTaGAGGCCAAGGTGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKLDPCH*RPRWRG
Trigger: GCCACGCCACCTTGGCCTTCAATGACAGGGATCTAG...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTGCTCATATTCAAGGTTaGGTTACAAGGCCCAAAGTC +
Preference number: 2 (lower is better)
Translates to: TVRTWAIWALECEERQMAAHIQG*VTRPKV
Trigger: GACTTTGGGCCTTGTAACTCAACCTTGAATATGAGC...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR-3UTR TCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCACCCACAGTCTACATTTaGGGCTCATATTCAAGGTTG +
Preference number: 2 (lower is better)
Translates to: PWRSTTSSEREWTKASGPPTVYI*GSYSRL
Trigger: CAACCTTGAATATGAGCCTCAAATGTAGACTGTGGG...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR-3UTR TCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTGATCACCACAATACTTaGGACAGGGTATCACACTTG +
Preference number: 2 (lower is better)
Translates to: TVRTWAIWALECEERQMADHHNT*DRVSHL
Trigger: CAAGTGTGATACCCTGTCTCAAGTATTGTGGTGATC...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTAGCAGGAGAGTGTCATaGAAGCTAATGGAAGAACAC +
Preference number: 2 (lower is better)
Translates to: TVRTWAIWALECEERQMASRRVS*KLMEEH
Trigger: GTGTTCTTCCATTAGCTTCCATGACACTCTCCTGCT...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCAGCATGGCTAAAACACTaGGTACTGAGATTGGAGGAT +
Preference number: 2 (lower is better)
Translates to: PWRSTTSSEREWTKASGPAWLKH*VLRLED
Trigger: ATCCTCCAATCTCAGTACCCAGTGTTTTAGCCATGC...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGAGAACCTGGGCCATATaGGCCCTGGAGTGTGAGGAG +
Preference number: 2 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKRTWAI*ALECEE
Trigger: CTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCT...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR CAA 90 bp GAGCTTGCATTCTGGGCTGGACTGAGCTGTATCTCTAATATTCTGTaGCCTCCCCAAGAGCTTATTGGTGGTCTCTGGAACAGGCTAGAG +
Preference number: 2 (lower is better)
Translates to: ELAFWAGLSCISNIL*PPQELIGGLWNRLE
Trigger: CTCTAGCCTGTTCCAGAGACCACCAATAAGCTCTTGGGGAGGCAACAGAATATTAGAGATACAGCTCAGTCCAGCCCAGAATGCAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR TCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTAAACCTGGAATAGGATaGTTGTGTAGCTCATCTTGG +
Preference number: 2 (lower is better)
Translates to: TVRTWAIWALECEERQMAKPGIG*LCSSSW
Trigger: CCAAGATGAGCTACACAATCATCCTATTCCAGGTTT...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR GCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGAAGGAAGTAGTCAGATaGAAAGACCATTCCTCCAAG +
Preference number: 2 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLKEVVR*KDHSSK
Trigger: CTTGGAGGAATGGTCTTTGCATCTGACTACTTCCTT...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR GCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTCTCCCCAAACGTGACTaGTCCAAACCCTGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: PRTALSTLPYKQGFSLSILPKRD*SKPWGF
Trigger: GAAACCCCAGGGTTTGGAGCAGTCACGTTTGGGGAG...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR GCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCATTTTTCTGCTGTGACTaGCTTCTGTCTGAACAGGTT +
Preference number: 2 (lower is better)
Translates to: PWRSTTSSEREWTKASGPFFCCD*LLSEQV
Trigger: AACCTGTTCAGACAGAAGGCAGTCACAGCAGAAAAA...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGGTGGTAGGCCAGGCATaGGGGAGATCCTACATTCCA +
Preference number: 2 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKVVGQA*GRSYIP
Trigger: TGGAATGTAGGATCTCCCCCATGCCTGGCCTACCAC...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGAACAGGTTTGACTTCTaGTTAAAAGCTAGTGCACAC +
Preference number: 2 (lower is better)
Translates to: EALGPEWIALQGTLIDTGNRFDF*LKASAH
Trigger: GTGTGCACTAGCTTTTAACCAGAAGTCAAACCTGTT...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR TCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCTCCAGTGTCTGTTaGGGAGTATCTTCCGGCCAA +
Preference number: 2 (lower is better)
Translates to: PRTALSTLPYKQGFSLSISSSVC*GVSSGQ
Trigger: TTGGCCGGAAGATACTCCTCAACAGACACTGGAGGA...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR GCA 90 bp CACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGATCCATTTGGGTGTTGGGCCATGTaGAAGGACCAAGTCCATGTT +
Preference number: 2 (lower is better)
Translates to: HMEVQVPCPRPKNDSDPFGCWAM*KDQVHV
Trigger: AACATGGACTTGGTCCTTGCACATGGCCCAACACCC...AAATGGATCTGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR-3UTR CCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGATCTGAATGTATCCTCTaGTGTGTGTTGAGACATGAT +
Preference number: 2 (lower is better)
Translates to: VRQTVRTWAIWALECEERSECIL*CVLRHD
Trigger: ATCATGTCTCAACACACACCAGAGGATACATTCAGA...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTGCATTTCCGCTGGTGTaGCTGATGGCTGACTTGTTG +
Preference number: 2 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIAFPLV*LMADLL
Trigger: CAACAAGTCAGCCATCAGCCACACCAGCGGAAATGC...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTGCACTGGGGCCTGAGTaGATAGCTCTCCAAGGTACA +
Preference number: 2 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPALGPE*IALQGT
Trigger: TGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGC...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTCAAAGACGCGGGTGTTaGGCCATGTGCAAGGACCAA +
Preference number: 2 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPQRRGC*AMCKDQ
Trigger: TTGGTCCTTGCACATGGCCCAACACCCGCGTCTTTG...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR-3UTR CCA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTTGGGCAGGGATTTCCTaGGTGGAGTTGATTTCCTGC +
Preference number: 2 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPWAGIS*VELISC
Trigger: GCAGGAAATCAACTCCACCCAGGAAATCCCTGCCCA...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR CAA 90 bp GGAAGTAGTCAGATGCAAAGACCATTCCTCCAAGGGGACCGTCACTaGACACCTCTGCTCTCAGAAGTTAGATCTCTGTCATCTTCACAT +
Preference number: 2 (lower is better)
Translates to: GSSQMQRPFLQGDRH*TPLLSEVRSLSSSH
Trigger: ATGTGAAGATGACAGAGATCTAACTTCTGAGAGCAGAGGTGTCAAGTGACGGTCCCCTTGGAGGAATGGTCTTTGCATCTGACTACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTGTAGCTCATCTTGGCTaGGGAACTGCTGACTGCCAA +
Preference number: 2 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPVAHLG*GTADCQ
Trigger: TTGGCAGTCAGCAGTTCCTCAGCCAAGATGAGCTAC...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR GCA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTTTCGTGATAAAGCCTTaGCCACACTCCGTGCATGCA +
Preference number: 2 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPFVIKP*PHSVHA
Trigger: TGCATGCACGGAGTGTGGGCAAGGCTTTATCACGAA...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR GCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGATCCAAGGTCCAAGATaGAGTTCCAAAGACGCGGGT +
Preference number: 2 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKIQGPR*SSKDAG
Trigger: ACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGAT...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR-3UTR CCA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTTTGAGCGACGACTTCTaGCTAAATCCATGCCCACAC +
Preference number: 2 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPLSDDF*LNPCPH
Trigger: GTGTGGGCATGGATTTAGCCAGAAGTCGTCGCTCAA...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGGGGGTGGGCGTACAGTaGATAGATTTGACTCCAAGT +
Preference number: 2 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKGVGVQ*IDLTPS
Trigger: ACTTGGAGTCAAATCTATCCACTGTACGCCCACCCC...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTCTCTTAGAACAAGAGTaGGGTGGGCGTACAGTGGAT +
Preference number: 2 (lower is better)
Translates to: PRTALSTLPYKQGFSLSILLEQE*GGRTVD
Trigger: ATCCACTGTACGCCCACCCCACTCTTGTTCTAAGAG...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp CACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGATCCATTTCTCTTAGAACAAGAGTaGGGTGGGCGTACAGTGGAT +
Preference number: 2 (lower is better)
Translates to: HMEVQVPCPRPKNDSDPFLLEQE*GGRTVD
Trigger: ATCCACTGTACGCCCACCCCACTCTTGTTCTAAGAG...AAATGGATCTGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR-3UTR CCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGAGAAAATCAATCATTGTaGAGGTCAGGGTTGGTTTTT +
Preference number: 2 (lower is better)
Translates to: VRQTVRTWAIWALECEERENQSL*RSGLVF
Trigger: AAAAACCAACCCTGACCTCCACAATGATTGATTTTC...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCAGAGCTTGCATTCTaGGCTGGACTGAGCTGTATC +
Preference number: 2 (lower is better)
Translates to: PRTALSTLPYKQGFSLSISELAF*AGLSCI
Trigger: GATACAGCTCAGTCCAGCCCAGAATGCAAGCTCTGA...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR TCA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTGTGTGTGTTGAGACATaGTCTCCTTACAAAGCCTCG +
Preference number: 2 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPVCVET*SPYKAS
Trigger: CGAGGCTTTGTAAGGAGATCATGTCTCAACACACAC...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp CACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGATCCATTTGTGTGCGAGGAGAGTTaGTTTATCACAAAAGCCTCG +
Preference number: 2 (lower is better)
Translates to: HMEVQVPCPRPKNDSDPFVCEES*FITKAS
Trigger: CGAGGCTTTTGTGATAAATCAACTCTCCTCGCACAC...AAATGGATCTGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR-3UTR TCA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTGTGTGCGAGGAGAGTTaGTTTATCACAAAAGCCTCG +
Preference number: 2 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPVCEES*FITKAS
Trigger: CGAGGCTTTTGTGATAAATCAACTCTCCTCGCACAC...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGGGTGTGGCTGATGGCTaGCTTGTTGCTAAAATCACA +
Preference number: 2 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKGVADG*LVAKIT
Trigger: TGTGATTTTAGCAACAAGTCAGCCATCAGCCACACC...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTGTGTCCTCTGACACGTaGCAAGTAATGATGTCCACG +
Preference number: 2 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPVSSDT*QVMMST
Trigger: CGTGGACATCATTACTTGTCACGTGTCAGAGGACAC...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGGGTTCAGGTCTAAGGTaGGTTCCAAAATGCAGAACA +
Preference number: 2 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWGSGLR*VPKCRT
Trigger: TGTTCTGCATTTTGGAACTCACCTTAGACCTGAACC...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR-3UTR TCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTCTGGTCTTGAATTCCTaGGCTCAAGTGATCCACCTG +
Preference number: 2 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPLVLNS*AQVIHL
Trigger: CAGGTGGATCACTTGAGCTCAGGAATTCAAGACCAG...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR-3UTR CCA 90 bp CACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGATCCATTTTCCAAATCTTATCCCTaGGTCCAGATCCAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: HMEVQVPCPRPKNDSDPFSKSYP*VQIQVQ
Trigger: TTGGACCTGGATCTGGACCCAGGGATAAGATTTGGA...AAATGGATCTGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR-3UTR TCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGTCCTCTGGTGTGTGTTaGGACATGATCTCCTTACAA +
Preference number: 2 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKSSGVC*DMISLQ
Trigger: TTGTAAGGAGATCATGTCTCAACACACACCAGAGGA...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCTCTGGTGTGTGTTaGGACATGATCTCCTTACAA +
Preference number: 2 (lower is better)
Translates to: PRTALSTLPYKQGFSLSISSGVC*DMISLQ
Trigger: TTGTAAGGAGATCATGTCTCAACACACACCAGAGGA...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp ATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACTTCAGATCCATTTCATaGCCAAGGTTCAGGTCTAAG +
Preference number: 2 (lower is better)
Translates to: IMVLSPRYTWRSKSHVQDFRSIS*PRFRSK
Trigger: CTTAGACCTGAACCTTGGTCATGAAATGGATCTGAA...GTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
3UTR-3UTR TCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTGTGCTTAATGAGCTCTaGCTTTTCACGAAAGCCTCG +
Preference number: 2 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPVLNEL*LFTKAS
Trigger: CGAGGCTTTCGTGAAAAGTCAGAGCTCATTAAGCAC...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR GCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTGTGGAGTTGATTTCCTaGATGGAAACCTGGAATAGG +
Preference number: 2 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIVELIS*METWNR
Trigger: CCTATTCCAGGTTTCCATGCAGGAAATCAACTCCAC...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGAGCAGGAGAGTGTCATaGAAGCTAATGGAAGAACAC +
Preference number: 2 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKSRRVS*KLMEEH
Trigger: GTGTTCTTCCATTAGCTTCCATGACACTCTCCTGCT...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTGGGTTTCTGCCCTCTTaGAAATTCTGTCTACTTCCT +
Preference number: 2 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIGFLPS*KFCLLP
Trigger: AGGAAGTAGACAGAATTTCCAAGAGGGCAGAAACCC...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR TCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTTCCTCTGGTGTGTGTTaGGACATGATCTCCTTACAA +
Preference number: 2 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPSSGVC*DMISLQ
Trigger: TTGTAAGGAGATCATGTCTCAACACACACCAGAGGA...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp ATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACTCTGAATGTATCCTCTaGTGTGTGTTGAGACATGAT +
Preference number: 2 (lower is better)
Translates to: IMVLSPRYTWRSKSHVQDSECIL*CVLRHD
Trigger: ATCATGTCTCAACACACACCAGAGGATACATTCAGA...GTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR-3UTR TCA 90 bp GTTATAGGACTGGGGACCAGGAATTTAGGTTCAACTCTAAGGTCTGATGGTCACACCAAAATTTGCAAGTaGGGTCCAAATCTTATCCCT +
Preference number: 2 (lower is better)
Translates to: VIGLGTRNLGSTLRSDGHTKICK*GPNLIP
Trigger: AGGGATAAGATTTGGACCTCACTTGCAAATTTTGGT...GTGACCATCAGACCTTAGAGTTGAACCTAAATTCCTGGTCCCCAGTCCTATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR-3UTR GCA 90 bp GAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGATCCATTTCATGACGGTTTAGTTCCAAGGTaGAGGTTCAAAGTTCATATC +
Preference number: 2 (lower is better)
Translates to: EVQVPCPRPKNDSDPFHDGLVPR*RFKVHI
Trigger: GATATGAACTTTGAACCTGCACCTTGGAACTAAACC...GTCATGAAATGGATCTGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
3UTR-3UTR GCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTCTGCACACCTGTGACTaGCTTTTGTCTGAAGATTTT +
Preference number: 2 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPLHTCD*LLSEDF
Trigger: AAAATCTTCAGACAAAAGGCAGTCACAGGTGTGCAG...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR TCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATACCAAGGTACACTCATTaGCACAGGGTATCAGGTAGG +
Preference number: 2 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIPRYTH*HRVSGR
Trigger: CCTACCTGATACCCTGTGTCAATGAGTGTACCTTGG...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAATCAACCACTTCCAGTaGGAGGGAGTGGACAAAAGC +
Preference number: 2 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIINHFQ*EGVDKS
Trigger: GCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGAT...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp TCCAAAGTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATAGGTTCAGGTCTAAGGTaGGTTCCAAAATGCAGAACA +
Preference number: 2 (lower is better)
Translates to: SKVQVNLQGPDHGPKSKIGSGLR*VPKCRT
Trigger: TGTTCTGCATTTTGGAACTCACCTTAGACCTGAACC...TATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGACTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
3UTR-3UTR TCA 90 bp AAGTCCAAAGTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGTTCAGATCCATTTCATaGCCAAGGTTCAGGTCTAAG +
Preference number: 2 (lower is better)
Translates to: KSKVQVNLQGPDHGPKSKFRSIS*PRFRSK
Trigger: CTTAGACCTGAACCTTGGTCATGAAATGGATCTGAA...CTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGACTTTGGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
3UTR-3UTR TCA 90 bp CACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGATCCATTTGATCCAGGTAGAGATTaGATTTCCAGTTATAAAGTC +
Preference number: 2 (lower is better)
Translates to: HMEVQVPCPRPKNDSDPFDPGRD*ISSYKV
Trigger: GACTTTATAACTGGAAATTCAATCTCTACCTGGATC...AAATGGATCTGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR-3UTR TCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGAGCTGGTTCAACATTTaGAAATCAATCATTGTGGAG +
Preference number: 2 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKSWFNI*KSIIVE
Trigger: CTCCACAATGATTGATTTTCAAATGTTGAACCAGCT...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR GCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATATTCGTGATAAAGCCTTaGCCACACTCCGTGCATGCA +
Preference number: 2 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIFVIKP*PHSVHA
Trigger: TGCATGCACGGAGTGTGGGCAAGGCTTTATCACGAA...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAACCTTGGGGATTCCCTaGAGATCAACCACTTCCAGT +
Preference number: 2 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKITLGIP*RSTTSS
Trigger: ACTGGAAGTGGTTGATCTCCAGGGAATCCCCAAGGT...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp GCACTGTTTCAGATGCAAAATGGTTATGACTTGTTCCTGATGTTGGAGTTGTGTATCCAGCAGACTTTTTaGTATCCTGGTAGCACCTCA +
Preference number: 2 (lower is better)
Translates to: ALFQMQNGYDLFLMLELCIQQTF*YPGSTS
Trigger: TGAGGTGCTACCAGGATACCAAAAAGTCTGCTGGAT...ACACAACTCCAACATCAGGAACAAGTCATAACCATTTTGCATCTGAAACAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412564.5
3UTR-3UTR CCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATATCCCCAAGAGCTTATTaGTGGTCTCTGGAACAGGCT +
Preference number: 2 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKISPRAY*WSLEQA
Trigger: AGCCTGTTCCAGAGACCACCAATAAGCTCTTGGGGA...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR TCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATACCACGGCTTCATTCTTaGAGTCAGCAAGACCAAGAA +
Preference number: 2 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIPRLHS*SQQDQE
Trigger: TTCTTGGTCTTGCTGACTTCAAGAATGAAGCCGTGG...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR GCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATATTTCTCCTAAAGCTTTaGCCACACTCCACGCATGCA +
Preference number: 2 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIFLLKL*PHSTHA
Trigger: TGCATGCGTGGAGTGTGGGCAAAGCTTTAGGAGAAA...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR GCA 90 bp AATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGGTTTAGTTCCAAGGTaGAGGTTCAAAGTTCATATC +
Preference number: 2 (lower is better)
Translates to: NLQGPDHGPKSKIHMEVQGLVPR*RFKVHI
Trigger: GATATGAACTTTGAACCTGCACCTTGGAACTAAACC...TTGGACCTCCATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
3UTR-3UTR TCA 90 bp ATCCAGGTACAATTTCCATGTTTAAGGTATAAGATCCATGGCCCAATAAAAAGCGGTTCAGGTCTAAGGTaGGTTCCAAAATGCAGAACA +
Preference number: 2 (lower is better)
Translates to: IQVQFPCLRYKIHGPIKSGSGLR*VPKCRT
Trigger: TGTTCTGCATTTTGGAACTCACCTTAGACCTGAACC...GCTTTTTATTGGGCCATGGATCTTATACCTTAAACATGGAAATTGTACCTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR-3UTR GCA 90 bp AAGTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACAGGTTTAGTTCCAAGGTaGAGGTTCAAAGTTCATATC +
Preference number: 2 (lower is better)
Translates to: KSKSIYKVQIMVLSPRYTGLVPR*RFKVHI
Trigger: GATATGAACTTTGAACCTGCACCTTGGAACTAAACC...TGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
3UTR-3UTR CCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATATCCCCTTCTTTTCTGTaGCAGAGTCCCTTAGCAAAT +
Preference number: 2 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKISPSFL*QSPLAN
Trigger: ATTTGCTAAGGGACTCTGCCACAGAAAAGAAGGGGA...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR TCA 90 bp TCAAAGGTCCAAATCCAGGTACAATTTCCATGTTTAAGGTATAAGATCCATGGCGATCCAGGTAGAGATTaGATTTCCAGTTATAAAGTC +
Preference number: 2 (lower is better)
Translates to: SKVQIQVQFPCLRYKIHGDPGRD*ISSYKV
Trigger: GACTTTATAACTGGAAATTCAATCTCTACCTGGATC...GCCATGGATCTTATACCTTAAACATGGAAATTGTACCTGGATTTGGACCTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR-3UTR GCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATATCTCTAATATTCTGTTaGCTCCCCAAGAGCTTATTG +
Preference number: 2 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKISLIFC*LPKSLL
Trigger: CAATAAGCTCTTGGGGAGGCAACAGAATATTAGAGA...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATATCTGAATGTATCCTCTaGTGTGTGTTGAGACATGAT +
Preference number: 2 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKISECIL*CVLRHD
Trigger: ATCATGTCTCAACACACACCAGAGGATACATTCAGA...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAACAGGGTATCACACTTaGGTTTATTATAGTTCTGCA +
Preference number: 2 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKITGYHT*VYYSSA
Trigger: TGCAGAACTATAATAAACCCAAGTGTGATACCCTGT...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CAA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGCCAAAGACGCGGGTGTaGGGCCATGTGCAAGGACCA +
Preference number: 3 (lower is better)
Translates to: EALGPEWIALQGTLIDTGPKTRV*GHVQGP
Trigger: TGGTCCTTGCACATGGCCCAACACCCGCGTCTTTGG...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR-3UTR CAA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTGCTAGATCCCTGTCATaGAAGGCCAAGGTGGCGTGG +
Preference number: 3 (lower is better)
Translates to: TVRTWAIWALECEERQMAARSLS*KAKVAW
Trigger: CCACGCCACCTTGGCCTTCAATGACAGGGATCTAGC...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR CCA 72 bp GCCCTTCCCCTAAGCAGGCTAACCTTGGGGATTCCCTaGAGATCAACCACTTCCAGTGAGAGGGAGTGGACA +
Preference number: 3 (lower is better)
Translates to: ALPLSRLTLGIP*RSTTSSEREWT
Trigger: TGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGGAATCCCCAAGGTTAGCCTGCTTAGGGGAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAGGGGACCGTCACTaGACACCTCTGCTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: VRQTVRTWAIWALECEERQGDRH*TPLLSE
Trigger: TTCTGAGAGCAGAGGTGTCAAGTGACGGTCCCCTTG...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCACAAGGGGACCGTCACTaGACACCTCTGCTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: PWRSTTSSEREWTKASGPQGDRH*TPLLSE
Trigger: TTCTGAGAGCAGAGGTGTCAAGTGACGGTCCCCTTG...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR CCA 72 bp ACCAATTCCAGACACATTAGGGTGGTAGGCCAGGCATaGGGGAGATCCTACATTCCAGGTACCCCTAGCCCT +
Preference number: 3 (lower is better)
Translates to: TNSRHIRVVGQA*GRSYIPGTPSP
Trigger: AGGGCTAGGGGTACCTGGAATGTAGGATCTCCCCCATGCCTGGCCTACCACCCTAATGTGTCTGGAATTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTCTGATGGCTGACTTGTaGCTAAAATCACATCCTCAC +
Preference number: 3 (lower is better)
Translates to: APAQGSKANCQNLGHMGPLMADL*LKSHPH
Trigger: GTGAGGATGTGATTTTAGCAACAAGTCAGCCATCAG...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp TTACAAGGCCCAAAGTCCACTTCCAAAGTCCAGGCTCAGGCACATAAGTCCAAGCCAAAGACGCGGGTGTaGGGCCATGTGCAAGGACCA +
Preference number: 3 (lower is better)
Translates to: LQGPKSTSKVQAQAHKSKPKTRV*GHVQGP
Trigger: TGGTCCTTGCACATGGCCCAACACCCGCGTCTTTGG...CTTGGACTTATGTGCCTGAGCCTGGACTTTGGAAGTGGACTTTGGGCCTTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR TCA 72 bp AACCTTGGGGATTCCCTGGAGATCAACCACTTCCAGTaGGAGGGAGTGGACAAAAGCCTCTGGACCAGCCAT +
Preference number: 3 (lower is better)
Translates to: NLGDSLEINHFQ*EGVDKSLWTSH
Trigger: ATGGCTGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGGAATCCCCAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR TCA 72 bp AGGAGCCCTGATCTTGGACTTCCCAGTTCCAGAACGTaGGGGTCCACGGCTTCATTCTTGAAGTCAGCAAGA +
Preference number: 3 (lower is better)
Translates to: RSPDLGLPSSRT*GSTASFLKSAR
Trigger: TCTTGCTGACTTCAAGAATGAAGCCGTGGACCCTCACGTTCTGGAACTGGGAAGTCCAAGATCAGGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR CCA 72 bp CCAAGGTCCAAGATGCAGTTCCAAAGACGCGGGTGTTaGGCCATGTGCAAGGACCAAGTCCATGTTCCAAAT +
Preference number: 3 (lower is better)
Translates to: PRSKMQFQRRGC*AMCKDQVHVPN
Trigger: ATTTGGAACATGGACTTGGTCCTTGCACATGGCCCAACACCCGCGTCTTTGGAACTGCATCTTGGACCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR-3UTR CAA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGCGTGTGCGAGGAGAGTaGATTTATCACAAAAGCCTC +
Preference number: 3 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLRVRGE*IYHKSL
Trigger: GAGGCTTTTGTGATAAATCAACTCTCCTCGCACACG...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGGCCTCCTTCCACTCGTaGATCTTCTGCTTCAGCCCC +
Preference number: 3 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWASFHS*IFCFSP
Trigger: GGGGCTGAAGCAGAAGATCAACGAGTGGAAGGAGGC...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CAA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGATCCTCTGGTGTGTGTaGAGACATGATCTCCTTACA +
Preference number: 3 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLILWCV*RHDLLT
Trigger: TGTAAGGAGATCATGTCTCAACACACACCAGAGGAT...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGCTGATGGCTGACTTGTaGCTAAAATCACATCCTCAC +
Preference number: 3 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLLMADL*LKSHPH
Trigger: GTGAGGATGTGATTTTAGCAACAAGTCAGCCATCAG...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGTGGCTGATGGCTGACTaGTTGCTAAAATCACATCCT +
Preference number: 3 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLWLMAD*LLKSHP
Trigger: AGGATGTGATTTTAGCAACAAGTCAGCCATCAGCCA...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGGCTAGATCCCTGTCATaGAAGGCCAAGGTGGCGTGG +
Preference number: 3 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKARSLS*KAKVAW
Trigger: CCACGCCACCTTGGCCTTCAATGACAGGGATCTAGC...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp TCCCTGTTTAAATTTCAGATCCAAGGTCCAAGATGCAGTTCCAAAGACGCGGGTGCTAGATCCCTGTCATaGAAGGCCAAGGTGGCGTGG +
Preference number: 3 (lower is better)
Translates to: SLFKFQIQGPRCSSKDAGARSLS*KAKVAW
Trigger: CCACGCCACCTTGGCCTTCAATGACAGGGATCTAGC...ACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGATCTGAAATTTAAACAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR TCA 72 bp CCAGTTCCAGAACGTGAGGGTCCACGGCTTCATTCTTaGAGTCAGCAAGACCAAGAACCCACCAATTCCAGA +
Preference number: 3 (lower is better)
Translates to: PVPEREGPRLHS*SQQDQEPTNSR
Trigger: TCTGGAATTGGTGGGTTCTTGGTCTTGCTGACTTCAAGAATGAAGCCGTGGACCCTCACGTTCTGGAACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR CCA 72 bp AAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATaGGCCCTGGAGTGTGAGGAGAGACAAATGGCTAAA +
Preference number: 3 (lower is better)
Translates to: KGVRQTVRTWAI*ALECEERQMAK
Trigger: TTTAGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGAAGTCACTGGTCCTATTaGATCACCACAATACTTGAG +
Preference number: 3 (lower is better)
Translates to: VRQTVRTWAIWALECEERSHWSY*ITTILE
Trigger: CTCAAGTATTGTGGTGATCAAATAGGACCAGTGACT...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CAA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGATATGGACTTCTGGCTTaGATTCCAATGAGACCAGAT +
Preference number: 3 (lower is better)
Translates to: VRQTVRTWAIWALECEERYGLLA*IPMRPD
Trigger: ATCTGGTCTCATTGGAATCAAAGCCAGAAGTCCATA...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR TCA 72 bp TGTAACACTCACCGTGAGGGTCCACGGCTTCATTCTTaGAGTCAGCAAGACCAAGAACCCACCAATTCCAGA +
Preference number: 3 (lower is better)
Translates to: CNTHREGPRLHS*SQQDQEPTNSR
Trigger: TCTGGAATTGGTGGGTTCTTGGTCTTGCTGACTTCAAGAATGAAGCCGTGGACCCTCACGGTGAGTGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354698.8
ENST00000457782.5
3UTR-3UTR CAA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGGTTCTCCGATGTGATTaGAGCGACGACTTCTGGCTA +
Preference number: 3 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWVLRCD*SDDFWL
Trigger: TAGCCAGAAGTCGTCGCTCAAATCACATCGGAGAAC...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGTGTGTACTCAGGTGGTaGCGGAGGACTGACTCAACT +
Preference number: 3 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKCVLRW*RRTDST
Trigger: AGTTGAGTCAGTCCTCCGCAACCACCTGAGTACACA...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR TCA 72 bp AGATGCAAAGACCATTCCTCCAAGGGGACCGTCACTTaGCACCTCTGCTCTCAGAAGTTAGATCTCTGTCAT +
Preference number: 3 (lower is better)
Translates to: RCKDHSSKGTVT*HLCSQKLDLCH
Trigger: ATGACAGAGATCTAACTTCTGAGAGCAGAGGTGTCAAGTGACGGTCCCCTTGGAGGAATGGTCTTTGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR TCA 72 bp GGTGTCCCTCAGATTGTAGGGCTGGAGACTGAACTCTaGGTAAAATCTAAAGGTGGGGTAGGAGAGGAAACA +
Preference number: 3 (lower is better)
Translates to: GVPQIVGLETEL*VKSKGGVGEET
Trigger: TGTTTCCTCTCCTACCCCACCTTTAGATTTTACTCAGAGTTCAGTCTCCAGCCCTACAATCTGAGGGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR TCA 72 bp TGTCTACTTCCTCAGAGCTTGCATTCTGGGCTGGACTaGGCTGTATCTCTAATATTCTGTTGCCTCCCCAAG +
Preference number: 3 (lower is better)
Translates to: CLLPQSLHSGLD*AVSLIFCCLPK
Trigger: CTTGGGGAGGCAACAGAATATTAGAGATACAGCTCAGTCCAGCCCAGAATGCAAGCTCTGAGGAAGTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR CCA 72 bp GTCAAAAGACTGTCCCCAAAGCTCTTAGAACAAGAGTaGGGTGGGCGTACAGTGGATAGATTTGACTCCAAG +
Preference number: 3 (lower is better)
Translates to: VKRLSPKLLEQE*GGRTVDRFDSK
Trigger: CTTGGAGTCAAATCTATCCACTGTACGCCCACCCCACTCTTGTTCTAAGAGCTTTGGGGACAGTCTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp CTTCCAAAGTCCAGGCTCAGGCACATAAGTCCAAGGTCTAATTCTAGGTCCACTATCCTCTGGTGTGTGTaGAGACATGATCTCCTTACA +
Preference number: 3 (lower is better)
Translates to: LPKSRLRHISPRSNSRSTILWCV*RHDLLT
Trigger: TGTAAGGAGATCATGTCTCAACACACACCAGAGGAT...AGTGGACCTAGAATTAGACCTTGGACTTATGTGCCTGAGCCTGGACTTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR-3UTR CAA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCGTGTGCGAGGAGAGTaGATTTATCACAAAAGCCTC +
Preference number: 3 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKRVRGE*IYHKSL
Trigger: GAGGCTTTTGTGATAAATCAACTCTCCTCGCACACG...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGTGGCTGATGGCTGACTaGTTGCTAAAATCACATCCT +
Preference number: 3 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWWLMAD*LLKSHP
Trigger: AGGATGTGATTTTAGCAACAAGTCAGCCATCAGCCA...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCACTGGGTACTGAGATaGGAGGATTTAAGAGGAGCT +
Preference number: 3 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKHWVLR*EDLRGA
Trigger: AGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTG...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTCACTGGGTACTGAGATaGGAGGATTTAAGAGGAGCT +
Preference number: 3 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIHWVLR*EDLRGA
Trigger: AGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTG...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR TCA 72 bp GGCCCACAGTCTACATTTGAGGCTCATATTCAAGGTTaGGTTACAAGGCCCAAAGTCCACTTCCAAAGTCCA +
Preference number: 3 (lower is better)
Translates to: GPQSTFEAHIQG*VTRPKVHFQSP
Trigger: TGGACTTTGGAAGTGGACTTTGGGCCTTGTAACTCAACCTTGAATATGAGCCTCAAATGTAGACTGTGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR CCA 72 bp GGCACCATTCCTGGATGTAATTTAGCCACCCGAGCATaGCTAAAACACTGGGTACTGAGATTGGAGGATTTA +
Preference number: 3 (lower is better)
Translates to: GTIPGCNLATRA*LKHWVLRLEDL
Trigger: TAAATCCTCCAATCTCAGTACCCAGTGTTTTAGCCATGCTCGGGTGGCTAAATTACATCCAGGAATGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTCTGATGGCTGACTTGTaGCTAAAATCACATCCTCAC +
Preference number: 3 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPLMADL*LKSHPH
Trigger: GTGAGGATGTGATTTTAGCAACAAGTCAGCCATCAG...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp TCCCTGTTTAAATTTCAGATCCAAGGTCCAAGATGCAGTTCCAAAGACGCGGGTGGCTCATATTCAAGGTaGAGTTACAAGGCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: SLFKFQIQGPRCSSKDAGGSYSR*SYKAQS
Trigger: ACTTTGGGCCTTGTAACTCAACCTTGAATATGAGCC...ACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGATCTGAAATTTAAACAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR-3UTR CAA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGGGCTCATATTCAAGGTaGAGTTACAAGGCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKGSYSR*SYKAQS
Trigger: ACTTTGGGCCTTGTAACTCAACCTTGAATATGAGCC...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
3UTR TCA 72 bp ACTGGGGACCAGGAATTTAGGTTCAACTCTAAGGTCTaGTGGTCACGTCTAAGGTCTAAATCCATGACTGAA +
Preference number: 3 (lower is better)
Translates to: TGDQEFRFNSKV*WSRLRSKSMTE
Trigger: TTCAGTCATGGATTTAGACCTTAGACGTGACCATCAGACCTTAGAGTTGAACCTAAATTCCTGGTCCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR CCA 72 bp ATTGCTAGATCCCTGTCATTGAAGGCCAAGGTGGCGTaGCTATGTTTAAGTCCTGAGTCTGAAGAACTTTTA +
Preference number: 3 (lower is better)
Translates to: IARSLSLKAKVA*LCLSPESEELL
Trigger: TAAAAGTTCTTCAGACTCAGGACTTAAACATAGCCACGCCACCTTGGCCTTCAATGACAGGGATCTAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTCCAAGCCTAAGTATTTaGAGGTTACATGAACATCTC +
Preference number: 3 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIPSLSI*RLHEHL
Trigger: GAGATGTTCATGTAACCTCAAAATACTTAGGCTTGG...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR-3UTR CAA 90 bp TTTCAGATGCAAAATGGTTATGACTTGTTCCTGATGTTGGAGTTGTGTGTTGACCTGGTAGCACCTCAGTaGCTGTCCATCAATCTTCCA +
Preference number: 3 (lower is better)
Translates to: FQMQNGYDLFLMLELCVDLVAPQ*LSINLP
Trigger: TGGAAGATTGATGGACAGCAACTGAGGTGCTACCAG...GTCAACACACAACTCCAACATCAGGAACAAGTCATAACCATTTTGCATCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412564.5
3UTR TCA 72 bp TCAGATCCATTTCATGACCAAGGTTCAGGTCTAAGGTaGGTTCCAAAATGCAGAACAAATCCAAGTCAGAGG +
Preference number: 3 (lower is better)
Translates to: SDPFHDQGSGLR*VPKCRTNPSQR
Trigger: CCTCTGACTTGGATTTGTTCTGCATTTTGGAACTCACCTTAGACCTGAACCTTGGTCATGAAATGGATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
3UTR CCA 72 bp TTGGAAATTCTGTCTACTTCCTCAGAGCTTGCATTCTaGGCTGGACTGAGCTGTATCTCTAATATTCTGTTG +
Preference number: 3 (lower is better)
Translates to: LEILSTSSELAF*AGLSCISNILL
Trigger: CAACAGAATATTAGAGATACAGCTCAGTCCAGCCCAGAATGCAAGCTCTGAGGAAGTAGACAGAATTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CAA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAGTTCTCCGATGTGATTaGAGCGACGACTTCTGGCTA +
Preference number: 3 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIVLRCD*SDDFWL
Trigger: TAGCCAGAAGTCGTCGCTCAAATCACATCGGAGAAC...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR CCA 72 bp ATTAGAATAGAGATGGTGTTTATCCAGCAGACTTTTTaGTATCCTGGTAGCACCTCAGTTGCTGTCCATCAA +
Preference number: 3 (lower is better)
Translates to: IRIEMVFIQQTF*YPGSTSVAVHQ
Trigger: TTGATGGACAGCAACTGAGGTGCTACCAGGATACCAAAAAGTCTGCTGGATAAACACCATCTCTATTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412564.5
3UTR-3UTR CAA 90 bp GCACTGTTTCAGATGCAAAATGGTTATGACTTGTTCCTGATGTTGGAGTTGTGTAGTGTATTAACAGGTTaGATTTGGGCACAGGAGATC +
Preference number: 3 (lower is better)
Translates to: ALFQMQNGYDLFLMLELCSVLTG*IWAQEI
Trigger: GATCTCCTGTGCCCAAATCAAACCTGTTAATACACT...ACACAACTCCAACATCAGGAACAAGTCATAACCATTTTGCATCTGAAACAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412564.5
3UTR-3UTR CAA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAATTTCCTGGGTGGAGTaGATTTCCTGCATGGAAACC +
Preference number: 3 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIISWVE*ISCMET
Trigger: GGTTTCCATGCAGGAAATCAACTCCACCCAGGAAAT...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CAA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAATCCTCTGGTGTGTGTaGAGACATGATCTCCTTACA +
Preference number: 3 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIILWCV*RHDLLT
Trigger: TGTAAGGAGATCATGTCTCAACACACACCAGAGGAT...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR CCA 72 bp TTGATCACCACAATACTTGAGACAGGGTATCACACTTaGGTTTATTATAGTTCTGCAAAGCTGGTTCAACAT +
Preference number: 3 (lower is better)
Translates to: LITTILETGYHT*VYYSSAKLVQH
Trigger: ATGTTGAACCAGCTTTGCAGAACTATAATAAACCCAAGTGTGATACCCTGTCTCAAGTATTGTGGTGATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR-3UTR CAA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAATCTCTAATATTCTGTaGCCTCCCCAAGAGCTTATT +
Preference number: 3 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIISNIL*PPQELI
Trigger: AATAAGCTCTTGGGGAGGCAACAGAATATTAGAGAT...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457782.5
CDS-3UTR GCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGAGTCCAGCCCAGTAGCTaGTCCCGCGGGGCCCACATC +
Preference number: 4 (lower is better)
Translates to: VRQTVRTWAIWALECEERVQPSS*SRGAHI
Trigger: GATGTGGGCCCCGCGGGAGCAGCTACTGGGCTGGAC...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTCCTGCCTCAGCCTCCTaGGTACCTGGAACTACAGGT +
Preference number: 4 (lower is better)
Translates to: APAQGSKANCQNLGHMGPPASAS*VPGTTG
Trigger: ACCTGTAGTTCCAGGTACTCAGGAGGCTGAGGCAGG...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR GCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTCTCCCCAAACGTGACTaGTCCAAACCCTGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: APAQGSKANCQNLGHMGPLPKRD*SKPWGF
Trigger: GAAACCCCAGGGTTTGGAGCAGTCACGTTTGGGGAG...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTCAAAGACGCGGGTGTTaGGCCATGTGCAAGGACCAA +
Preference number: 4 (lower is better)
Translates to: APAQGSKANCQNLGHMGPQRRGC*AMCKDQ
Trigger: TTGGTCCTTGCACATGGCCCAACACCCGCGTCTTTG...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCACACACTCCCCAAACGTaGCTGCTCCAAACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PWRSTTSSEREWTKASGPHTPQT*LLQTLG
Trigger: CCCCAGGGTTTGGAGCAGTCACGTTTGGGGAGTGTG...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTCGCGGGGCCCACATCTaGGCGCGCACGCACGCACGA +
Preference number: 4 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIRGAHI*ARTHAR
Trigger: TCGTGCGTGCGTGCGCGCGCAGATGTGGGCCCCGCG...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354698.8
ENST00000448461.5
CDS-3UTR GCA 90 bp GTGTTACCACTGAGGACAGCTGAGTGTATTAACAGGTTTGATTTGGGCACAGGACGCGGGGCCCACATCTaGGCGCGCACGCACGCACGA +
Preference number: 4 (lower is better)
Translates to: VLPLRTAECINRFDLGTGRGAHI*ARTHAR
Trigger: TCGTGCGTGCGTGCGCGCGCAGATGTGGGCCCCGCG...TCCTGTGCCCAAATCAAACCTGTTAATACACTCAGCTGTCCTCAGTGGTAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR GCA 90 bp CACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGATCCATTTCGCGGGGCCCACATCTaGGCGCGCACGCACGCACGA +
Preference number: 4 (lower is better)
Translates to: HMEVQVPCPRPKNDSDPFRGAHI*ARTHAR
Trigger: TCGTGCGTGCGTGCGCGCGCAGATGTGGGCCCCGCG...AAATGGATCTGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR TCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGTGTGTTCTCCGATGTaGTTTGAGCGACGACTTCTG +
Preference number: 4 (lower is better)
Translates to: APAQGSKANCQNLGHMGPVCSPM*FERRLL
Trigger: CAGAAGTCGTCGCTCAAATCACATCGGAGAACACAC...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGTGTCCTCTGACACGTaGCAAGTAATGATGTCCACG +
Preference number: 4 (lower is better)
Translates to: APAQGSKANCQNLGHMGPVSSDT*QVMMST
Trigger: CGTGGACATCATTACTTGTCACGTGTCAGAGGACAC...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGCTAGATCCCTGTCATTaGAGGCCAAGGTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLLDPCH*RPRWRG
Trigger: GCCACGCCACCTTGGCCTTCAATGACAGGGATCTAG...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTCCAAGGTACACTCATTaGCACAGGGTATCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: APAQGSKANCQNLGHMGPPRYTH*HRVSGR
Trigger: CCTACCTGATACCCTGTGTCAATGAGTGTACCTTGG...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCACCCAGTTCCAGAACGTaGGGGTCCACGGCTTCATTC +
Preference number: 4 (lower is better)
Translates to: PWRSTTSSEREWTKASGPPSSRT*GSTASF
Trigger: GAATGAAGCCGTGGACCCTCACGTTCTGGAACTGGG...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR GCA 90 bp AGGTTTAGTTCCAAGGTGCAGGTTCAAAGTTCATATCCACACACAAGGTCCAACCGCGGGGCCCACATCTaGGCGCGCACGCACGCACGA +
Preference number: 4 (lower is better)
Translates to: RFSSKVQVQSSYPHTRSNRGAHI*ARTHAR
Trigger: TCGTGCGTGCGTGCGCGCGCAGATGTGGGCCCCGCG...GTTGGACCTTGTGTGTGGATATGAACTTTGAACCTGCACCTTGGAACTAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR GCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTTTCGTGATAAAGCCTTaGCCACACTCCGTGCATGCA +
Preference number: 4 (lower is better)
Translates to: APAQGSKANCQNLGHMGPFVIKP*PHSVHA
Trigger: TGCATGCACGGAGTGTGGGCAAGGCTTTATCACGAA...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGGCACTGGGGCCTGAGTaGATAGCTCTCCAAGGTACA +
Preference number: 4 (lower is better)
Translates to: EALGPEWIALQGTLIDTGALGPE*IALQGT
Trigger: TGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGC...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGAAAGGGGACCGTCACTTaGCACCTCTGCTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: VRQTVRTWAIWALECEERKGTVT*HLCSQK
Trigger: CTTCTGAGAGCAGAGGTGTCAAGTGACGGTCCCCTT...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGCTCCCCAAACGTGACTaGTCCAAACCCTGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLLPKRD*SKPWGF
Trigger: GAAACCCCAGGGTTTGGAGCAGTCACGTTTGGGGAG...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCAGTGCCCCATCTaGCACTGGAACCAGATATCT +
Preference number: 4 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLGQCPI*HWNQIS
Trigger: AGATATCTGGTTCCAGTGGCAGATGGGGCACTGGCC...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457782.5
CDS-3UTR CCA 90 bp GATGCAGTTCCAAAGACGCGGGTGTTGGGCCATGTGCAAGGACCAAGTCCATGTGGGCCATATGGGCCCTaGAGTGTGAGGAGAGACAAA +
Preference number: 4 (lower is better)
Translates to: DAVPKTRVLGHVQGPSPCGPYGP*SVRRDK
Trigger: TTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCC...ACATGGACTTGGTCCTTGCACATGGCCCAACACCCGCGTCTTTGGAACTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCAGTGGTAGGCCAGGCATaGGGGAGATCCTACATTCCA +
Preference number: 4 (lower is better)
Translates to: PWRSTTSSEREWTKASGPVVGQA*GRSYIP
Trigger: TGGAATGTAGGATCTCCCCCATGCCTGGCCTACCAC...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTGTGGTAGGCCAGGCATaGGGGAGATCCTACATTCCA +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMAVVGQA*GRSYIP
Trigger: TGGAATGTAGGATCTCCCCCATGCCTGGCCTACCAC...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGAGTAGCTCATCTTGGCTaGGGAACTGCTGACTGCCAA +
Preference number: 4 (lower is better)
Translates to: VRQTVRTWAIWALECEERVAHLG*GTADCQ
Trigger: TTGGCAGTCAGCAGTTCCTCAGCCAAGATGAGCTAC...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTTCCAAAACAAGGGTCTaGCGCCTCCTTCCACTCGTT +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMASKTRV*RLLPLV
Trigger: AACGAGTGGAAGGAGGCGTCAGACCCTTGTTTTGGA...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GATGCAGTTCCAAAGACGCGGGTGTTGGGCCATGTGCAAGGACCAAGTCCATGTTCCAAAACAAGGGTCTaGCGCCTCCTTCCACTCGTT +
Preference number: 4 (lower is better)
Translates to: DAVPKTRVLGHVQGPSPCSKTRV*RLLPLV
Trigger: AACGAGTGGAAGGAGGCGTCAGACCCTTGTTTTGGA...ACATGGACTTGGTCCTTGCACATGGCCCAACACCCGCGTCTTTGGAACTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGTCCAAAACAAGGGTCTaGCGCCTCCTTCCACTCGTT +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLSKTRV*RLLPLV
Trigger: AACGAGTGGAAGGAGGCGTCAGACCCTTGTTTTGGA...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTGTGGTTGCGGAGGACTaGCTCAACTATAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMAVVAED*LNYKAS
Trigger: CGAGGCTTTATAGTTGAGTCAGTCCTCCGCAACCAC...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGATCACCACAATACTTaGGACAGGGTATCACACTTG +
Preference number: 4 (lower is better)
Translates to: APAQGSKANCQNLGHMGPDHHNT*DRVSHL
Trigger: CAAGTGTGATACCCTGTCTCAAGTATTGTGGTGATC...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
CDS-3UTR CCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTATCCTCGAAAGTCACTaGTCCCAGATATCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: APAQGSKANCQNLGHMGPILESH*SQISRL
Trigger: AAGCCTAGATATCTGGGACCAGTGACTTTCGAGGAT...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354698.8
ENST00000448461.5
CDS-3UTR CCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGGCATTTCCGCTGGTGTaGCTGATGGCTGACTTGTTG +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLAFPLV*LMADLL
Trigger: CAACAAGTCAGCCATCAGCCACACCAGCGGAAATGC...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGCTCTTAGAACAAGAGTaGGGTGGGCGTACAGTGGAT +
Preference number: 4 (lower is better)
Translates to: EALGPEWIALQGTLIDTGLLEQE*GGRTVD
Trigger: ATCCACTGTACGCCCACCCCACTCTTGTTCTAAGAG...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTAGCAGGAGAGTGTCATaGAAGCTAATGGAAGAACAC +
Preference number: 4 (lower is better)
Translates to: APAQGSKANCQNLGHMGPSRRVS*KLMEEH
Trigger: GTGTTCTTCCATTAGCTTCCATGACACTCTCCTGCT...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGTGGTTTCAGGGAAGTaGTGGAAATCCAAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: APAQGSKANCQNLGHMGPVVSGK*WKSKKE
Trigger: TTCCTTCTTGGATTTCCACCACTTCCCTGAAACCAC...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
CDS-3UTR TCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGAGTGTGTTCTCCGATGTaGTTTGAGCGACGACTTCTG +
Preference number: 4 (lower is better)
Translates to: VRQTVRTWAIWALECEERVCSPM*FERRLL
Trigger: CAGAAGTCGTCGCTCAAATCACATCGGAGAACACAC...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTGTGTGTTCTCCGATGTaGTTTGAGCGACGACTTCTG +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMAVCSPM*FERRLL
Trigger: CAGAAGTCGTCGCTCAAATCACATCGGAGAACACAC...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGGTGTGCGAGGAGAGTTaGTTTATCACAAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: EALGPEWIALQGTLIDTGVCEES*FITKAS
Trigger: CGAGGCTTTTGTGATAAATCAACTCTCCTCGCACAC...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTGTGTCCTCTGACACGTaGCAAGTAATGATGTCCACG +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMAVSSDT*QVMMST
Trigger: CGTGGACATCATTACTTGTCACGTGTCAGAGGACAC...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACCAAGGTACACTCATTaGCACAGGGTATCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: VRQTVRTWAIWALECEERPRYTH*HRVSGR
Trigger: CCTACCTGATACCCTGTGTCAATGAGTGTACCTTGG...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ATCCAAGGTCCAAGATGCAGTTCCAAAGACGCGGGTGTTGGGCCATGTGCAAGGATCAACCACTTCCAGTaGGAGGGAGTGGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: IQGPRCSSKDAGVGPCARINHFQ*EGVDKS
Trigger: GCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGAT...CCTTGCACATGGCCCAACACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp ATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACCAGGGGCAGGAGCCCTaGTCTTGGACTTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: IMVLSPRYTWRSKSHVQDQGQEP*SWTSQF
Trigger: GAACTGGGAAGTCCAAGATCAGGGCTCCTGCCCCTG...GTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR GCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTTACTTCCTCAGAGCTTaGATTCTGGGCTGGACTGAG +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMAYFLRA*ILGWTE
Trigger: CTCAGTCCAGCCCAGAATGCAAGCTCTGAGGAAGTA...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGTACTTCCTCAGAGCTTaGATTCTGGGCTGGACTGAG +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLYFLRA*ILGWTE
Trigger: CTCAGTCCAGCCCAGAATGCAAGCTCTGAGGAAGTA...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGTGTACTCAGGTGGTTaGGGAGGACTGACTCAACTA +
Preference number: 4 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLVYSGG*GGLTQL
Trigger: TAGTTGAGTCAGTCCTCCGCAACCACCTGAGTACAC...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGTTCGTGATAAAGCCTTaGCCACACTCCGTGCATGCA +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLFVIKP*PHSVHA
Trigger: TGCATGCACGGAGTGTGGGCAAGGCTTTATCACGAA...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTTCCCCAAGAGCTTATTaGTGGTCTCTGGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMASPRAY*WSLEQA
Trigger: AGCCTGTTCCAGAGACCACCAATAAGCTCTTGGGGA...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGTCAGAGCTTGCATTCTaGGCTGGACTGAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLSELAF*AGLSCI
Trigger: GATACAGCTCAGTCCAGCCCAGAATGCAAGCTCTGA...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTTTGAGCGACGACTTCTaGCTAAATCCATGCCCACAC +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMALSDDF*LNPCPH
Trigger: GTGTGGGCATGGATTTAGCCAGAAGTCGTCGCTCAA...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp ATCCAAGGTCCAAGATGCAGTTCCAAAGACGCGGGTGTTGGGCCATGTGCAAGGGGGGTGGGCGTACAGTaGATAGATTTGACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: IQGPRCSSKDAGVGPCARGVGVQ*IDLTPS
Trigger: ACTTGGAGTCAAATCTATCCACTGTACGCCCACCCC...CCTTGCACATGGCCCAACACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTTTAGCCACCCGAGCATaGCTAAAACACTGGGTACTG +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMALATRA*LKHWVL
Trigger: CAGTACCCAGTGTTTTAGCCATGCTCGGGTGGCTAA...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGAACCTTGGGGATTCCCTaGAGATCAACCACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VRQTVRTWAIWALECEERTLGIP*RSTTSS
Trigger: ACTGGAAGTGGTTGATCTCCAGGGAATCCCCAAGGT...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp CTTCCAAAGTCCAGGCTCAGGCACATAAGTCCAAGGTCTAATTCTAGGTCCACTGCAACCTCTGCCTCCTaGGCCCAAGTGAACCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPKSRLRHISPRSNSRSTATSAS*AQVNLL
Trigger: CAGGAGGTTCACTTGGGCCCAGGAGGCAGAGGTTGC...AGTGGACCTAGAATTAGACCTTGGACTTATGTGCCTGAGCCTGGACTTTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR CCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGTGCCCCATCTGCCACTaGAACCAGATATCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLCPICH*NQISRL
Trigger: AAGCCTAGATATCTGGTTCCAGTGGCAGATGGGGCA...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR CAA 72 bp TCCAAGGTCCAAGATGCAGTTCCAAAGACGCGGGTGTaGGGCCATGTGCAAGGACCAAGTCCATGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SKVQDAVPKTRV*GHVQGPSPCSK
Trigger: TTTGGAACATGGACTTGGTCCTTGCACATGGCCCAACACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR TCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTCACACTCCCCAAACGTaGCTGCTCCAAACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIHTPQT*LLQTLG
Trigger: CCCCAGGGTTTGGAGCAGTCACGTTTGGGGAGTGTG...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCACACTCCCCAAACGTaGCTGCTCCAAACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKHTPQT*LLQTLG
Trigger: CCCCAGGGTTTGGAGCAGTCACGTTTGGGGAGTGTG...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGGTGCTTAATGAGCTCTaGCTTTTCACGAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLVLNEL*LFTKAS
Trigger: CGAGGCTTTCGTGAAAAGTCAGAGCTCATTAAGCAC...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCAGTGTGTGTTGAGACATaGTCTCCTTACAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PWRSTTSSEREWTKASGPVCVET*SPYKAS
Trigger: CGAGGCTTTGTAAGGAGATCATGTCTCAACACACAC...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACCTAGATCCCTGTCATTaGAGGCCAAGGTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: IMVLSPRYTWRSKSHVQDLDPCH*RPRWRG
Trigger: GCCACGCCACCTTGGCCTTCAATGACAGGGATCTAG...GTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGCTAGATCCCTGTCATTaGAGGCCAAGGTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWLDPCH*RPRWRG
Trigger: GCCACGCCACCTTGGCCTTCAATGACAGGGATCTAG...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAGAGGCACTGGGGCCTaGGTGGATAGCTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPRGTGA*VDSSPR
Trigger: CCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTCT...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGGTGGAGTTGATTTCCTaGATGGAAACCTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: EALGPEWIALQGTLIDTGVELIS*METWNR
Trigger: CCTATTCCAGGTTTCCATGCAGGAAATCAACTCCAC...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTAAACCCTGGGGTTTCTaGCCTCTTGGAAATTCTGTC +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMAKPWGF*PLGNSV
Trigger: GACAGAATTTCCAAGAGGGCAGAAACCCCAGGGTTT...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGCTTATTGGTGGTCTCTaGAACAGGCTAGAGAAACCC +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLLIGGL*NRLEKP
Trigger: GGGTTTCTCTAGCCTGTTCCAGAGACCACCAATAAG...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACCAAGAGCTTATTGGTaGTCTCTGGAACAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: VRQTVRTWAIWALECEERPRAYW*SLEQAR
Trigger: TCTAGCCTGTTCCAGAGACCACCAATAAGCTCTTGG...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGGGGTTTCTGCCCTCTTaGAAATTCTGTCTACTTCCT +
Preference number: 4 (lower is better)
Translates to: EALGPEWIALQGTLIDTGGFLPS*KFCLLP
Trigger: AGGAAGTAGACAGAATTTCCAAGAGGGCAGAAACCC...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTATGTCTGATGAGGTATaGCTTGCAGCTAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMAMSDEV*LAAKAS
Trigger: CGAGGCTTTAGCTGCAAGCCATACCTCATCAGACAT...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGGCATGGCTAAAACACTaGGTACTGAGATTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: EALGPEWIALQGTLIDTGAWLKH*VLRLED
Trigger: ATCCTCCAATCTCAGTACCCAGTGTTTTAGCCATGC...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp ATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACAGAACCTGGGCCATATaGGCCCTGGAGTGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: IMVLSPRYTWRSKSHVQDRTWAI*ALECEE
Trigger: CTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCT...GTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCAAGTCCAAGATACACATaGAGGTCCAAGTCCCATGTC +
Preference number: 4 (lower is better)
Translates to: PWRSTTSSEREWTKASGPSPRYT*RSKSHV
Trigger: GACATGGGACTTGGACCTCCATGTGTATCTTGGACT...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp TTACAAGGCCCAAAGTCCACTTCCAAAGTCCAGGCTCAGGCACATAAGTCCAAGGTAGCTCATCTTGGCTaGGGAACTGCTGACTGCCAA +
Preference number: 4 (lower is better)
Translates to: LQGPKSTSKVQAQAHKSKVAHLG*GTADCQ
Trigger: TTGGCAGTCAGCAGTTCCTCAGCCAAGATGAGCTAC...CTTGGACTTATGTGCCTGAGCCTGGACTTTGGAAGTGGACTTTGGGCCTTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCCTCCTTCCACTCGTTaGTCTTCTGCTTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKPPSTR*SSASAP
Trigger: GGGGGCTGAAGCAGAAGATCAACGAGTGGAAGGAGG...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTTATTTTGAGGTTACATaGACATCTCTCCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: APAQGSKANCQNLGHMGPYFEVT*TSLPFF
Trigger: AAAGAAGGGGAGAGATGTTCATGTAACCTCAAAATA...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGATCCAGGTAGAGATTaGATTTCCAGTTATAAAGTC +
Preference number: 4 (lower is better)
Translates to: APAQGSKANCQNLGHMGPDPGRD*ISSYKV
Trigger: GACTTTATAACTGGAAATTCAATCTCTACCTGGATC...AGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp GGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGCTGGTCTTGAATTCCTaGGCTCAAGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: GPKSKIHMEVQVPCPRPKLVLNS*AQVIHL
Trigger: CAGGTGGATCACTTGAGCTCAGGAATTCAAGACCAG...CTTGGGTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR GCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGGTGGAGTTGATTTCCTaGATGGAAACCTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLVELIS*METWNR
Trigger: CCTATTCCAGGTTTCCATGCAGGAAATCAACTCCAC...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp GGTCCAAGATGCAGTTCCAAAGACGCGGGTGTTGGGCCATGTGCAAGGACCAAGAAGGAAGTAGTCAGATaGAAAGACCATTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GPRCSSKDAGVGPCARTKKEVVR*KDHSSK
Trigger: CTTGGAGGAATGGTCTTTGCATCTGACTACTTCCTT...CTTGGTCCTTGCACATGGCCCAACACCCGCGTCTTTGGAACTGCATCTTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGGGGTTTCTGCCCTCTTaGAAATTCTGTCTACTTCCT +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLGFLPS*KFCLLP
Trigger: AGGAAGTAGACAGAATTTCCAAGAGGGCAGAAACCC...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGAGCAGGAGAGTGTCATaGAAGCTAATGGAAGAACAC +
Preference number: 4 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLSRRVS*KLMEEH
Trigger: GTGTTCTTCCATTAGCTTCCATGACACTCTCCTGCT...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCATCCCCTTCTTTTCTGTaGCAGAGTCCCTTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: PWRSTTSSEREWTKASGPSPSFL*QSPLAN
Trigger: ATTTGCTAAGGGACTCTGCCACAGAAAAGAAGGGGA...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGTCCCCTTCTTTTCTGTaGCAGAGTCCCTTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLSPSFL*QSPLAN
Trigger: ATTTGCTAAGGGACTCTGCCACAGAAAAGAAGGGGA...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGAAACCTGGAATAGGATaGTTGTGTAGCTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLKPGIG*LCSSSW
Trigger: CCAAGATGAGCTACACAATCATCCTATTCCAGGTTT...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CCAAGGTTCAGGTCTAAGGTGAGTTCCAAAATGCAGAACAAATCCAAGTCAGAGCCTCCTTCCACTCGTTaGTCTTCTGCTTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PRFRSKVSSKMQNKSKSEPPSTR*SSASAP
Trigger: GGGGGCTGAAGCAGAAGATCAACGAGTGGAAGGAGG...CTCTGACTTGGATTTGTTCTGCATTTTGGAACTCACCTTAGACCTGAACCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440261.6
ENST00000448461.5
CDS-3UTR TCA 90 bp CAGATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAATCCAAAACAAGGGTCTaGCGCCTCCTTCCACTCGTT +
Preference number: 4 (lower is better)
Translates to: QIMVLSPRYTWRSKSHVQSKTRV*RLLPLV
Trigger: AACGAGTGGAAGGAGGCGTCAGACCCTTGTTTTGGA...TTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440261.6
ENST00000448461.5
CDS-3UTR TCA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGGTGGTAGTGGAGGGTTaGCTGAGCTATAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWVVVEG*LSYKAS
Trigger: CGAGGCTTTATAGCTCAGTCAACCCTCCACTACCAC...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CCAAAATTTGCAAGTGAGGTCCAAATCTTATCCCTGGGTCCAGATCCAGGTCCATCCTCCAGTGTCTGTTaGGGAGTATCTTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: PKFASEVQILSLGPDPGPSSSVC*GVSSGQ
Trigger: TTGGCCGGAAGATACTCCTCAACAGACACTGGAGGA...TGGACCTGGATCTGGACCCAGGGATAAGATTTGGACCTCACTTGCAAATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTAAGGGGACCGTCACTTaGCACCTCTGCTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIKGTVT*HLCSQK
Trigger: CTTCTGAGAGCAGAGGTGTCAAGTGACGGTCCCCTT...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGAAGGGGACCGTCACTTaGCACCTCTGCTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKKGTVT*HLCSQK
Trigger: CTTCTGAGAGCAGAGGTGTCAAGTGACGGTCCCCTT...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp AATCCAAGTCAGAGGTTTAGTTCCAAGGTGCAGGTTCAAAGTTCATATCCACACCAGGGGCAGGAGCCCTaGTCTTGGACTTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: NPSQRFSSKVQVQSSYPHQGQEP*SWTSQF
Trigger: GAACTGGGAAGTCCAAGATCAGGGCTCCTGCCCCTG...GTGTGGATATGAACTTTGAACCTGCACCTTGGAACTAAACCTCTGACTTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR GCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGATTTTTCTGCTGTGACTaGCTTCTGTCTGAACAGGTT +
Preference number: 4 (lower is better)
Translates to: VRQTVRTWAIWALECEERFFCCD*LLSEQV
Trigger: AACCTGTTCAGACAGAAGGCAGTCACAGCAGAAAAA...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACTGCACACCTGTGACTaGCTTTTGTCTGAAGATTTT +
Preference number: 4 (lower is better)
Translates to: VRQTVRTWAIWALECEERLHTCD*LLSEDF
Trigger: AAAATCTTCAGACAAAAGGCAGTCACAGGTGTGCAG...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp TTACAAGGCCCAAAGTCCACTTCCAAAGTCCAGGCTCAGGCACATAAGTCCAAGTTCGTGATAAAGCCTTaGCCACACTCCGTGCATGCA +
Preference number: 4 (lower is better)
Translates to: LQGPKSTSKVQAQAHKSKFVIKP*PHSVHA
Trigger: TGCATGCACGGAGTGTGGGCAAGGCTTTATCACGAA...CTTGGACTTATGTGCCTGAGCCTGGACTTTGGAAGTGGACTTTGGGCCTTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR GCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTAAGGAAGTAGTCAGATaGAAAGACCATTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMAKEVVR*KDHSSK
Trigger: CTTGGAGGAATGGTCTTTGCATCTGACTACTTCCTT...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGTCTGAATGTATCCTCTaGTGTGTGTTGAGACATGAT +
Preference number: 4 (lower is better)
Translates to: EALGPEWIALQGTLIDTGSECIL*CVLRHD
Trigger: ATCATGTCTCAACACACACCAGAGGATACATTCAGA...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp TCCCTGTTTAAATTTCAGATCCAAGGTCCAAGATGCAGTTCCAAAGACGCGGGTCTCTGTCCTCCAGGCTaGAGTGCAGCTGTACAAGCT +
Preference number: 4 (lower is better)
Translates to: SLFKFQIQGPRCSSKDAGLCPPG*SAAVQA
Trigger: AGCTTGTACAGCTGCACTCCAGCCTGGAGGACAGAG...ACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGATCTGAAATTTAAACAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
3UTR CAA 72 bp CAGATGCAAAGACCATTCCTCCAAGGGGACCGTCACTaGACACCTCTGCTCTCAGAAGTTAGATCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QMQRPFLQGDRH*TPLLSEVRSLS
Trigger: TGACAGAGATCTAACTTCTGAGAGCAGAGGTGTCAAGTGACGGTCCCCTTGGAGGAATGGTCTTTGCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTGTAGCTCATCTTGGCTaGGGAACTGCTGACTGCCAA +
Preference number: 4 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIVAHLG*GTADCQ
Trigger: TTGGCAGTCAGCAGTTCCTCAGCCAAGATGAGCTAC...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp TCCCTGTTTAAATTTCAGATCCAAGGTCCAAGATGCAGTTCCAAAGACGCGGGTGTGGTAGTGGAGGGTTaGCTGAGCTATAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SLFKFQIQGPRCSSKDAGVVVEG*LSYKAS
Trigger: CGAGGCTTTATAGCTCAGTCAACCCTCCACTACCAC...ACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGATCTGAAATTTAAACAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGTCCTCCAGTGTCTGTTaGGGAGTATCTTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKSSSVC*GVSSGQ
Trigger: TTGGCCGGAAGATACTCCTCAACAGACACTGGAGGA...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CCAAAATTTGCAAGTGAGGTCCAAATCTTATCCCTGGGTCCAGATCCAGGTCCACCAAGGTACACTCATTaGCACAGGGTATCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: PKFASEVQILSLGPDPGPPRYTH*HRVSGR
Trigger: CCTACCTGATACCCTGTGTCAATGAGTGTACCTTGG...TGGACCTGGATCTGGACCCAGGGATAAGATTTGGACCTCACTTGCAAATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTACCAAAATTTGCAAGTaGGGTCCAAATCTTATCCCT +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMATKICK*GPNLIP
Trigger: AGGGATAAGATTTGGACCTCACTTGCAAATTTTGGT...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR GCA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGATCTCTAATATTCTGTTaGCTCCCCAAGAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: VRQTVRTWAIWALECEERSLIFC*LPKSLL
Trigger: CAATAAGCTCTTGGGGAGGCAACAGAATATTAGAGA...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp TTACAAGGCCCAAAGTCCACTTCCAAAGTCCAGGCTCAGGCACATAAGTCCAAGAAACCCTGGGGTTTCTaGCCTCTTGGAAATTCTGTC +
Preference number: 4 (lower is better)
Translates to: LQGPKSTSKVQAQAHKSKKPWGF*PLGNSV
Trigger: GACAGAATTTCCAAGAGGGCAGAAACCCCAGGGTTT...CTTGGACTTATGTGCCTGAGCCTGGACTTTGGAAGTGGACTTTGGGCCTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR GCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCAGGTTTAGTTCCAAGGTaGAGGTTCAAAGTTCATATC +
Preference number: 4 (lower is better)
Translates to: PWRSTTSSEREWTKASGPGLVPR*RFKVHI
Trigger: GATATGAACTTTGAACCTGCACCTTGGAACTAAACC...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR GCA 90 bp TCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGGGTGTTGGGCCATGTaGAAGGACCAAGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: SKIHMEVQVPCPRPKNDSGCWAM*KDQVHV
Trigger: AACATGGACTTGGTCCTTGCACATGGCCCAACACCC...TGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR CCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTGGGCAGGGATTTCCTaGGTGGAGTTGATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIWAGIS*VELISC
Trigger: GCAGGAAATCAACTCCACCCAGGAAATCCCTGCCCA...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGTCCCCAAGAGCTTATTaGTGGTCTCTGGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWSPRAY*WSLEQA
Trigger: AGCCTGTTCCAGAGACCACCAATAAGCTCTTGGGGA...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGTCAGAGCTTGCATTCTaGGCTGGACTGAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWSELAF*AGLSCI
Trigger: GATACAGCTCAGTCCAGCCCAGAATGCAAGCTCTGA...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGAACAGGTTTGACTTCTaGTTAAAAGCTAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLNRFDF*LKASAH
Trigger: GTGTGCACTAGCTTTTAACCAGAAGTCAAACCTGTT...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGAACAGGTTTGACTTCTaGTTAAAAGCTAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLNRFDF*LKASAH
Trigger: GTGTGCACTAGCTTTTAACCAGAAGTCAAACCTGTT...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTTCTGAATGTATCCTCTaGTGTGTGTTGAGACATGAT +
Preference number: 4 (lower is better)
Translates to: TVRTWAIWALECEERQMASECIL*CVLRHD
Trigger: ATCATGTCTCAACACACACCAGAGGATACATTCAGA...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp CCAAAATTTGCAAGTGAGGTCCAAATCTTATCCCTGGGTCCAGATCCAGGTCCAAAGGCCAAGGTGGCGTaGCTATGTTTAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PKFASEVQILSLGPDPGPKAKVA*LCLSPE
Trigger: CTCAGGACTTAAACATAGCCACGCCACCTTGGCCTT...TGGACCTGGATCTGGACCCAGGGATAAGATTTGGACCTCACTTGCAAATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp CCAAGGTTCAGGTCTAAGGTGAGTTCCAAAATGCAGAACAAATCCAAGTCAGAGCAAAGACGCGGGTGTTaGGCCATGTGCAAGGACCAA +
Preference number: 4 (lower is better)
Translates to: PRFRSKVSSKMQNKSKSEQRRGC*AMCKDQ
Trigger: TTGGTCCTTGCACATGGCCCAACACCCGCGTCTTTG...CTCTGACTTGGATTTGTTCTGCATTTTGGAACTCACCTTAGACCTGAACCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR CCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATATGGGCAGCTTCCGTGTaGGCTCCTAGCAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIWAASV*APSRPS
Trigger: GCTGGGCCTGCTAGGAGCCCACACGGAAGCTGCCCA...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR CAA 72 bp TTCTGGGCTGGACTGAGCTGTATCTCTAATATTCTGTaGCCTCCCCAAGAGCTTATTGGTGGTCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: FWAGLSCISNIL*PPQELIGGLWN
Trigger: GTTCCAGAGACCACCAATAAGCTCTTGGGGAGGCAACAGAATATTAGAGATACAGCTCAGTCCAGCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
CDS-3UTR TCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTGTGGTTGCGGAGGACTaGCTCAACTATAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPVVAED*LNYKAS
Trigger: CGAGGCTTTATAGTTGAGTCAGTCCTCCGCAACCAC...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTGTGGTAGTGGAGGGTTaGCTGAGCTATAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPVVVEG*LSYKAS
Trigger: CGAGGCTTTATAGCTCAGTCAACCCTCCACTACCAC...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCCCGAGTGTGTCCTCTaGCACGTGACAAGTAATGAT +
Preference number: 4 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKPECVL*HVTSND
Trigger: ATCATTACTTGTCACGTGTCAGAGGACACACTCGGG...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTCCCGAGTGTGTCCTCTaGCACGTGACAAGTAATGAT +
Preference number: 4 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIPECVL*HVTSND
Trigger: ATCATTACTTGTCACGTGTCAGAGGACACACTCGGG...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGTATTTTGAGGTTACATaGACATCTCTCCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLYFEVT*TSLPFF
Trigger: AAAGAAGGGGAGAGATGTTCATGTAACCTCAAAATA...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTATCAACCACTTCCAGTaGGAGGGAGTGGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIINHFQ*EGVDKS
Trigger: GCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGAT...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGATCAACCACTTCCAGTaGGAGGGAGTGGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKINHFQ*EGVDKS
Trigger: GCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGAT...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ATAATCATTCTGAGTTATAGGACTGGGGACCAGGAATTTAGGTTCAACTCTAAGCAGGGGCAGGAGCCCTaGTCTTGGACTTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: IIILSYRTGDQEFRFNSKQGQEP*SWTSQF
Trigger: GAACTGGGAAGTCCAAGATCAGGGCTCCTGCCCCTG...CTTAGAGTTGAACCTAAATTCCTGGTCCCCAGTCCTATAACTCAGAATGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR TCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTCTGGTCTTGAATTCCTaGGCTCAAGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: PRTALSTLPYKQGFSLSILVLNS*AQVIHL
Trigger: CAGGTGGATCACTTGAGCTCAGGAATTCAAGACCAG...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp TGCATAATCATTCTGAGTTATAGGACTGGGGACCAGGAATTTAGGTTCAACTCTCCTGCCTCAGCCTCCTaGGTACCTGGAACTACAGGT +
Preference number: 4 (lower is better)
Translates to: CIIILSYRTGDQEFRFNSPASAS*VPGTTG
Trigger: ACCTGTAGTTCCAGGTACTCAGGAGGCTGAGGCAGG...AGAGTTGAACCTAAATTCCTGGTCCCCAGTCCTATAACTCAGAATGATTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR TCA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGAGCTGGTTCAACATTTaGAAATCAATCATTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLSWFNI*KSIIVE
Trigger: CTCCACAATGATTGATTTTCAAATGTTGAACCAGCT...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457782.5
CDS-3UTR GCA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTGTGTACTCAGGTGGTTaGGGAGGACTGACTCAACTA +
Preference number: 4 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPVYSGG*GGLTQL
Trigger: TAGTTGAGTCAGTCCTCCGCAACCACCTGAGTACAC...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp TCCCTGTTTAAATTTCAGATCCAAGGTCCAAGATGCAGTTCCAAAGACGCGGGTATCCAAGGTCCAAGATaGAGTTCCAAAGACGCGGGT +
Preference number: 4 (lower is better)
Translates to: SLFKFQIQGPRCSSKDAGIQGPR*SSKDAG
Trigger: ACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGAT...ACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGATCTGAAATTTAAACAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR GCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTATCCAAGGTCCAAGATaGAGTTCCAAAGACGCGGGT +
Preference number: 4 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIIQGPR*SSKDAG
Trigger: ACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGAT...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp CAGATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAACTTATTGGTGGTCTCTaGAACAGGCTAGAGAAACCC +
Preference number: 4 (lower is better)
Translates to: QIMVLSPRYTWRSKSHVQLIGGL*NRLEKP
Trigger: GGGTTTCTCTAGCCTGTTCCAGAGACCACCAATAAG...TTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGCCAAGAGCTTATTGGTaGTCTCTGGAACAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWPRAYW*SLEQAR
Trigger: TCTAGCCTGTTCCAGAGACCACCAATAAGCTCTTGG...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTGGGGTGGGCGTACAGTaGATAGATTTGACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIGVGVQ*IDLTPS
Trigger: ACTTGGAGTCAAATCTATCCACTGTACGCCCACCCC...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTCTCTTAGAACAAGAGTaGGGTGGGCGTACAGTGGAT +
Preference number: 4 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPLLEQE*GGRTVD
Trigger: ATCCACTGTACGCCCACCCCACTCTTGTTCTAAGAG...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp TTACAAGGCCCAAAGTCCACTTCCAAAGTCCAGGCTCAGGCACATAAGTCCAAGTCCCCTTCTTTTCTGTaGCAGAGTCCCTTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LQGPKSTSKVQAQAHKSKSPSFL*QSPLAN
Trigger: ATTTGCTAAGGGACTCTGCCACAGAAAAGAAGGGGA...CTTGGACTTATGTGCCTGAGCCTGGACTTTGGAAGTGGACTTTGGGCCTTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp GTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATGCTCTGTCCTCCAGGCTaGAGTGCAGCTGTACAAGCT +
Preference number: 4 (lower is better)
Translates to: VQVNLQGPDHGPKSKIHMLCPPG*SAAVQA
Trigger: AGCTTGTACAGCTGCACTCCAGCCTGGAGGACAGAG...CATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR CCA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCAACAGGGTATCACACTTaGGTTTATTATAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PWRSTTSSEREWTKASGPTGYHT*VYYSSA
Trigger: TGCAGAACTATAATAAACCCAAGTGTGATACCCTGT...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
CDS-3UTR TCA 90 bp AAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATGGAGGGTAGCTCATCTTGGCTaGGGAACTGCTGACTGCCAA +
Preference number: 4 (lower is better)
Translates to: KSIYKVQIMVLSPRYTWRVAHLG*GTADCQ
Trigger: TTGGCAGTCAGCAGTTCCTCAGCCAAGATGAGCTAC...CCTCCATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440261.6
ENST00000448461.5
CDS-3UTR TCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGGTGTGTGTTGAGACATaGTCTCCTTACAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKVCVET*SPYKAS
Trigger: CGAGGCTTTGTAAGGAGATCATGTCTCAACACACAC...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp TCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGGTGTGGCTGATGGCTaGCTTGTTGCTAAAATCACA +
Preference number: 4 (lower is better)
Translates to: SKIHMEVQVPCPRPKNDSGVADG*LVAKIT
Trigger: TGTGATTTTAGCAACAAGTCAGCCATCAGCCACACC...TGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTGGTGTGGCTGATGGCTaGCTTGTTGCTAAAATCACA +
Preference number: 4 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIGVADG*LVAKIT
Trigger: TGTGATTTTAGCAACAAGTCAGCCATCAGCCACACC...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTCTTACTCTCACTCCATaGAGGTTTCTCCCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPLTLTP*RFLPSV
Trigger: CACACTCGGGAGAAACCTTCATGGAGTGAGAGTAAG...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAAGAGGCACTGGGGCCTaGGTGGATAGCTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIRGTGA*VDSSPR
Trigger: CCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTCT...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp GTGTTTATCCAGCAGACTTTTTGGTATCCTGGTAGCACCTCAGTTGCTGTCCATCCTCAGTGTTACCACTaGGGACAGCTGAGTGTATTA +
Preference number: 4 (lower is better)
Translates to: VFIQQTFWYPGSTSVAVHPQCYH*GQLSVL
Trigger: TAATACACTCAGCTGTCCTCAGTGGTAACACTGAGG...ATGGACAGCAACTGAGGTGCTACCAGGATACCAAAAAGTCTGCTGGATAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR TCA 90 bp CTTCCAAAGTCCAGGCTCAGGCACATAAGTCCAAGGTCTAATTCTAGGTCCACTGCTCATATTCAAGGTTaGGTTACAAGGCCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LPKSRLRHISPRSNSRSTAHIQG*VTRPKV
Trigger: GACTTTGGGCCTTGTAACTCAACCTTGAATATGAGC...AGTGGACCTAGAATTAGACCTTGGACTTATGTGCCTGAGCCTGGACTTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR GCA 90 bp AAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATGGAGGAGATGTGAGCCACTGTaGCTGGCCCACAGTCTACAT +
Preference number: 4 (lower is better)
Translates to: KSIYKVQIMVLSPRYTWRRCEPL*LAHSLH
Trigger: ATGTAGACTGTGGGCCAGGCACAGTGGCTCACATCT...CCTCCATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR CCA 90 bp CAGCAGACTTTTTGGTATCCTGGTAGCACCTCAGTTGCTGTCCATCAATCTTCCATCCTCGAAAGTCACTaGTCCCAGATATCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: QQTFWYPGSTSVAVHQSSILESH*SQISRL
Trigger: AAGCCTAGATATCTGGGACCAGTGACTTTCGAGGAT...GGAAGATTGATGGACAGCAACTGAGGTGCTACCAGGATACCAAAAAGTCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR CCA 90 bp CAGATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAATCCTCGAAAGTCACTaGTCCCAGATATCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: QIMVLSPRYTWRSKSHVQILESH*SQISRL
Trigger: AAGCCTAGATATCTGGGACCAGTGACTTTCGAGGAT...TTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR CCA 90 bp CCAAAATTTGCAAGTGAGGTCCAAATCTTATCCCTGGGTCCAGATCCAGGTCCAATCCTCGAAAGTCACTaGTCCCAGATATCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: PKFASEVQILSLGPDPGPILESH*SQISRL
Trigger: AAGCCTAGATATCTGGGACCAGTGACTTTCGAGGAT...TGGACCTGGATCTGGACCCAGGGATAAGATTTGGACCTCACTTGCAAATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR CCA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGGGGTTTCTGCCCTCTTaGAAATTCTGTCTACTTCCT +
Preference number: 4 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWGFLPS*KFCLLP
Trigger: AGGAAGTAGACAGAATTTCCAAGAGGGCAGAAACCC...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp GTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATGGCATTTCCGCTGGTGTaGCTGATGGCTGACTTGTTG +
Preference number: 4 (lower is better)
Translates to: VQVNLQGPDHGPKSKIHMAFPLV*LMADLL
Trigger: CAACAAGTCAGCCATCAGCCACACCAGCGGAAATGC...CATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp ATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACGCATGGCTAAAACACTaGGTACTGAGATTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: IMVLSPRYTWRSKSHVQDAWLKH*VLRLED
Trigger: ATCCTCCAATCTCAGTACCCAGTGTTTTAGCCATGC...GTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTTTAGCCACCCGAGCATaGCTAAAACACTGGGTACTG +
Preference number: 4 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPLATRA*LKHWVL
Trigger: CAGTACCCAGTGTTTTAGCCATGCTCGGGTGGCTAA...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTACCTTGGGGATTCCCTaGAGATCAACCACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPTLGIP*RSTTSS
Trigger: ACTGGAAGTGGTTGATCTCCAGGGAATCCCCAAGGT...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp TGCATAATCATTCTGAGTTATAGGACTGGGGACCAGGAATTTAGGTTCAACTCTGTGGTAGGCCAGGCATaGGGGAGATCCTACATTCCA +
Preference number: 4 (lower is better)
Translates to: CIIILSYRTGDQEFRFNSVVGQA*GRSYIP
Trigger: TGGAATGTAGGATCTCCCCCATGCCTGGCCTACCAC...AGAGTTGAACCTAAATTCCTGGTCCCCAGTCCTATAACTCAGAATGATTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGTCCAAATCTTATCCCTaGGTCCAGATCCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKSKSYP*VQIQVQ
Trigger: TTGGACCTGGATCTGGACCCAGGGATAAGATTTGGA...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATACCTCCTTCCACTCGTTaGTCTTCTGCTTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIPPSTR*SSASAP
Trigger: GGGGGCTGAAGCAGAAGATCAACGAGTGGAAGGAGG...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTGTGTGTGTTGAGACATaGTCTCCTTACAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPVCVET*SPYKAS
Trigger: CGAGGCTTTGTAAGGAGATCATGTCTCAACACACAC...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTTCCTCTGGTGTGTGTTaGGACATGATCTCCTTACAA +
Preference number: 4 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPSSGVC*DMISLQ
Trigger: TTGTAAGGAGATCATGTCTCAACACACACCAGAGGA...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTGTGTGCGAGGAGAGTTaGTTTATCACAAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPVCEES*FITKAS
Trigger: CGAGGCTTTTGTGATAAATCAACTCTCCTCGCACAC...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp AATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTGTCCTCTGACACGTaGCAAGTAATGATGTCCACG +
Preference number: 4 (lower is better)
Translates to: NLQGPDHGPKSKIHMEVQVSSDT*QVMMST
Trigger: CGTGGACATCATTACTTGTCACGTGTCAGAGGACAC...TTGGACCTCCATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTCTGGAGACTGAACTCTaGGTAAAATCTAAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PRTALSTLPYKQGFSLSILETEL*VKSKGG
Trigger: CCCACCTTTAGATTTTACTCAGAGTTCAGTCTCCAG...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp TCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGGTTCAGGTCTAAGGTaGGTTCCAAAATGCAGAACA +
Preference number: 4 (lower is better)
Translates to: SKIHMEVQVPCPRPKNDSGSGLR*VPKCRT
Trigger: TGTTCTGCATTTTGGAACTCACCTTAGACCTGAACC...TGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR TCA 90 bp TCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCATTCAACTCTAAGGTCTaGTGGTCACGTCTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SKIHMEVQVPCPRPKNDSFNSKV*WSRLRS
Trigger: AGACCTTAGACGTGACCATCAGACCTTAGAGTTGAA...TGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR TCA 90 bp TCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGCTCATATTCAAGGTTaGGTTACAAGGCCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SKIHMEVQVPCPRPKNDSAHIQG*VTRPKV
Trigger: GACTTTGGGCCTTGTAACTCAACCTTGAATATGAGC...TGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR GCA 90 bp CACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGATCCATTTGTGGAGTTGATTTCCTaGATGGAAACCTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: HMEVQVPCPRPKNDSDPFVELIS*METWNR
Trigger: CCTATTCCAGGTTTCCATGCAGGAAATCAACTCCAC...AAATGGATCTGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440261.6
ENST00000448461.5
CDS-3UTR GCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTAAACCCTGGGGTTTCTaGCCTCTTGGAAATTCTGTC +
Preference number: 4 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPKPWGF*PLGNSV
Trigger: GACAGAATTTCCAAGAGGGCAGAAACCCCAGGGTTT...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp CTTCCAAAGTCCAGGCTCAGGCACATAAGTCCAAGGTCTAATTCTAGGTCCACTTTTTTCTGCTGTGACTaGCTTCTGTCTGAACAGGTT +
Preference number: 4 (lower is better)
Translates to: LPKSRLRHISPRSNSRSTFFCCD*LLSEQV
Trigger: AACCTGTTCAGACAGAAGGCAGTCACAGCAGAAAAA...AGTGGACCTAGAATTAGACCTTGGACTTATGTGCCTGAGCCTGGACTTTGGAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR GCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTTTTCTCCTAAAGCTTTaGCCACACTCCACGCATGCA +
Preference number: 4 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPFLLKL*PHSTHA
Trigger: TGCATGCGTGGAGTGTGGGCAAAGCTTTAGGAGAAA...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp AAGTCCAAAGTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGTCAGAGCTTGCATTCTaGGCTGGACTGAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: KSKVQVNLQGPDHGPKSKSELAF*AGLSCI
Trigger: GATACAGCTCAGTCCAGCCCAGAATGCAAGCTCTGA...CTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGACTTTGGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGGCATGGCTAAAACACTaGGTACTGAGATTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKAWLKH*VLRLED
Trigger: ATCCTCCAATCTCAGTACCCAGTGTTTTAGCCATGC...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp ATAATCATTCTGAGTTATAGGACTGGGGACCAGGAATTTAGGTTCAACTCTAAGGCACTGGGGCCTGAGTaGATAGCTCTCCAAGGTACA +
Preference number: 4 (lower is better)
Translates to: IIILSYRTGDQEFRFNSKALGPE*IALQGT
Trigger: TGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGC...CTTAGAGTTGAACCTAAATTCCTGGTCCCCAGTCCTATAACTCAGAATGATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp ATTTCATTACCAAAATTTGCAAGTGAGGTCCAAATCTTATCCCTGGGTCCAGATGTGGTTGCGGAGGACTaGCTCAACTATAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: ISLPKFASEVQILSLGPDVVAED*LNYKAS
Trigger: CGAGGCTTTATAGTTGAGTCAGTCCTCCGCAACCAC...ATCTGGACCCAGGGATAAGATTTGGACCTCACTTGCAAATTTTGGTAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp CCAAGGTTCAGGTCTAAGGTGAGTTCCAAAATGCAGAACAAATCCAAGTCAGAGTCCTCTGGTGTGTGTTaGGACATGATCTCCTTACAA +
Preference number: 4 (lower is better)
Translates to: PRFRSKVSSKMQNKSKSESSGVC*DMISLQ
Trigger: TTGTAAGGAGATCATGTCTCAACACACACCAGAGGA...CTCTGACTTGGATTTGTTCTGCATTTTGGAACTCACCTTAGACCTGAACCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp AAGTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACACTTACTCTCACTCCATaGAGGTTTCTCCCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: KSKSIYKVQIMVLSPRYTLTLTP*RFLPSV
Trigger: CACACTCGGGAGAAACCTTCATGGAGTGAGAGTAAG...TGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp CAGACTTTTTGGTATCCTGGTAGCACCTCAGTTGCTGTCCATCAATCTTCCAATGGGCACAGGAGATCCTaGTCTCTCCATAATATTAGA +
Preference number: 4 (lower is better)
Translates to: QTFWYPGSTSVAVHQSSNGHRRS*SLHNIR
Trigger: TCTAATATTATGGAGAGATCAGGATCTCCTGTGCCC...ATTGGAAGATTGATGGACAGCAACTGAGGTGCTACCAGGATACCAAAAAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR TCA 90 bp GTGTTTATCCAGCAGACTTTTTGGTATCCTGGTAGCACCTCAGTTGCTGTCCATGTTATGACTTGTTCCTaGTGTTGGAGTTGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: VFIQQTFWYPGSTSVAVHVMTCS*CWSCVL
Trigger: CAACACACAACTCCAACATCAGGAACAAGTCATAAC...ATGGACAGCAACTGAGGTGCTACCAGGATACCAAAAAGTCTGCTGGATAAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR TCA 90 bp AGGTTTAGTTCCAAGGTGCAGGTTCAAAGTTCATATCCACACACAAGGTCCAACGGTTCAGGTCTAAGGTaGGTTCCAAAATGCAGAACA +
Preference number: 4 (lower is better)
Translates to: RFSSKVQVQSSYPHTRSNGSGLR*VPKCRT
Trigger: TGTTCTGCATTTTGGAACTCACCTTAGACCTGAACC...GTTGGACCTTGTGTGTGGATATGAACTTTGAACCTGCACCTTGGAACTAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR TCA 90 bp TCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCATTCAGATCCATTTCATaGCCAAGGTTCAGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: SKIHMEVQVPCPRPKNDSFRSIS*PRFRSK
Trigger: CTTAGACCTGAACCTTGGTCATGAAATGGATCTGAA...TGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR TCA 90 bp TTACAAGGCCCAAAGTCCACTTCCAAAGTCCAGGCTCAGGCACATAAGTCCAAGGATCCAGGTAGAGATTaGATTTCCAGTTATAAAGTC +
Preference number: 4 (lower is better)
Translates to: LQGPKSTSKVQAQAHKSKDPGRD*ISSYKV
Trigger: GACTTTATAACTGGAAATTCAATCTCTACCTGGATC...CTTGGACTTATGTGCCTGAGCCTGGACTTTGGAAGTGGACTTTGGGCCTTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR TCA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTAAAGACAACTATAATTaGAGGCCGTATCACAGCGAC +
Preference number: 4 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIKDNYN*RPYHSD
Trigger: GTCGCTGTGATACGGCCTTCAATTATAGTTGTCTTT...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
CDS-3UTR GCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCTGCACACCTGTGACTaGCTTTTGTCTGAAGATTTT +
Preference number: 4 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKLHTCD*LLSEDF
Trigger: AAAATCTTCAGACAAAAGGCAGTCACAGGTGTGCAG...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp AAGTCCAAAGTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGTTTCTCCTAAAGCTTTaGCCACACTCCACGCATGCA +
Preference number: 4 (lower is better)
Translates to: KSKVQVNLQGPDHGPKSKFLLKL*PHSTHA
Trigger: TGCATGCGTGGAGTGTGGGCAAAGCTTTAGGAGAAA...CTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGACTTTGGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR GCA 90 bp ATTTCATTACCAAAATTTGCAAGTGAGGTCCAAATCTTATCCCTGGGTCCAGATGGGTGTTGGGCCATGTaGAAGGACCAAGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: ISLPKFASEVQILSLGPDGCWAM*KDQVHV
Trigger: AACATGGACTTGGTCCTTGCACATGGCCCAACACCC...ATCTGGACCCAGGGATAAGATTTGGACCTCACTTGCAAATTTTGGTAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR GCA 90 bp ATAATCATTCTGAGTTATAGGACTGGGGACCAGGAATTTAGGTTCAACTCTAAGAGATGTGAGCCACTGTaGCTGGCCCACAGTCTACAT +
Preference number: 4 (lower is better)
Translates to: IIILSYRTGDQEFRFNSKRCEPL*LAHSLH
Trigger: ATGTAGACTGTGGGCCAGGCACAGTGGCTCACATCT...CTTAGAGTTGAACCTAAATTCCTGGTCCCCAGTCCTATAACTCAGAATGATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR CCA 90 bp CCAAAATTTGCAAGTGAGGTCCAAATCTTATCCCTGGGTCCAGATCCAGGTCCATCTGAATGTATCCTCTaGTGTGTGTTGAGACATGAT +
Preference number: 4 (lower is better)
Translates to: PKFASEVQILSLGPDPGPSECIL*CVLRHD
Trigger: ATCATGTCTCAACACACACCAGAGGATACATTCAGA...TGGACCTGGATCTGGACCCAGGGATAAGATTTGGACCTCACTTGCAAATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAGGGCCATATGGGCCCTaGAGTGTGAGGAGAGACAAA +
Preference number: 4 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIGPYGP*SVRRDK
Trigger: TTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCC...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp TCCAAAGTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATAACCTTGGGGATTCCCTaGAGATCAACCACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SKVQVNLQGPDHGPKSKITLGIP*RSTTSS
Trigger: ACTGGAAGTGGTTGATCTCCAGGGAATCCCCAAGGT...TATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGACTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp TCAGTGTTACCACTGAGGACAGCTGAGTGTATTAACAGGTTTGATTTGGGCACAATCCAGCAGACTTTTTaGTATCCTGGTAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: SVLPLRTAECINRFDLGTIQQTF*YPGSTS
Trigger: TGAGGTGCTACCAGGATACCAAAAAGTCTGCTGGAT...TGTGCCCAAATCAAACCTGTTAATACACTCAGCTGTCCTCAGTGGTAACACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR CCA 90 bp GTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATGAGTCCAAGATACACATaGAGGTCCAAGTCCCATGTC +
Preference number: 4 (lower is better)
Translates to: VQVNLQGPDHGPKSKIHMSPRYT*RSKSHV
Trigger: GACATGGGACTTGGACCTCCATGTGTATCTTGGACT...CATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR CCA 90 bp AAGTCCAAAGTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGAGTCCAAGATACACATaGAGGTCCAAGTCCCATGTC +
Preference number: 4 (lower is better)
Translates to: KSKVQVNLQGPDHGPKSKSPRYT*RSKSHV
Trigger: GACATGGGACTTGGACCTCCATGTGTATCTTGGACT...CTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGACTTTGGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR CCA 90 bp AATCCAAGTCAGAGGTTTAGTTCCAAGGTGCAGGTTCAAAGTTCATATCCACACTCCAAATCTTATCCCTaGGTCCAGATCCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: NPSQRFSSKVQVQSSYPHSKSYP*VQIQVQ
Trigger: TTGGACCTGGATCTGGACCCAGGGATAAGATTTGGA...GTGTGGATATGAACTTTGAACCTGCACCTTGGAACTAAACCTCTGACTTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR CCA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTGTTTCAGGGAAGTGGTaGAAATCCAAGAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPVSGKW*KSKKER
Trigger: TCTTTCCTTCTTGGATTTCCACCACTTCCCTGAAAC...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
3UTR CAA 72 bp ATGCAAAATGGTTATGACTTGTTCCTGATGTTGGAGTaGTGTGTTGACCTCAGTGTTACCACTGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: MQNGYDLFLMLE*CVDLSVTTEDS
Trigger: GCTGTCCTCAGTGGTAACACTGAGGTCAACACACAACTCCAACATCAGGAACAAGTCATAACCATTTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR TCA 90 bp TCCAAAGTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATAGTGTGCGAGGAGAGTTaGTTTATCACAAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SKVQVNLQGPDHGPKSKIVCEES*FITKAS
Trigger: CGAGGCTTTTGTGATAAATCAACTCTCCTCGCACAC...TATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGACTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATATCCTCCAGTGTCTGTTaGGGAGTATCTTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKISSSVC*GVSSGQ
Trigger: TTGGCCGGAAGATACTCCTCAACAGACACTGGAGGA...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp AATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAACTGGAGACTGAACTCTaGGTAAAATCTAAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: NLQGPDHGPKSKIHMEVQLETEL*VKSKGG
Trigger: CCCACCTTTAGATTTTACTCAGAGTTCAGTCTCCAG...TTGGACCTCCATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR TCA 90 bp AATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAACAGTTCCAGAACCAATaGGACCAGATTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: NLQGPDHGPKSKIHMEVQQFQNQ*DQIPEI
Trigger: AATCTCAGGAATCTGGTCTCATTGGTTCTGGAACTG...TTGGACCTCCATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427617.6
CDS-3UTR TCA 90 bp GTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATGGGTTCAGGTCTAAGGTaGGTTCCAAAATGCAGAACA +
Preference number: 4 (lower is better)
Translates to: VQVNLQGPDHGPKSKIHMGSGLR*VPKCRT
Trigger: TGTTCTGCATTTTGGAACTCACCTTAGACCTGAACC...CATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR TCA 90 bp CCAAGGTTCAGGTCTAAGGTGAGTTCCAAAATGCAGAACAAATCCAAGTCAGAGTTCAGATCCATTTCATaGCCAAGGTTCAGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: PRFRSKVSSKMQNKSKSEFRSIS*PRFRSK
Trigger: CTTAGACCTGAACCTTGGTCATGAAATGGATCTGAA...CTCTGACTTGGATTTGTTCTGCATTTTGGAACTCACCTTAGACCTGAACCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR GCA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGTCTCTAATATTCTGTTaGCTCCCCAAGAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKSLIFC*LPKSLL
Trigger: CAATAAGCTCTTGGGGAGGCAACAGAATATTAGAGA...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTTTTTTCTGCTGTGACTaGCTTCTGTCTGAACAGGTT +
Preference number: 4 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPFFCCD*LLSEQV
Trigger: AACCTGTTCAGACAGAAGGCAGTCACAGCAGAAAAA...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR GCA 90 bp CAGCAGACTTTTTGGTATCCTGGTAGCACCTCAGTTGCTGTCCATCAATCTTCCAGGCACTGTTTCAGATaGAAAATGGTTATGACTTGT +
Preference number: 4 (lower is better)
Translates to: QQTFWYPGSTSVAVHQSSRHCFR*KMVMTC
Trigger: ACAAGTCATAACCATTTTGCATCTGAAACAGTGCCT...GGAAGATTGATGGACAGCAACTGAGGTGCTACCAGGATACCAAAAAGTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR CCA 90 bp TCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAAACAGGTTTGACTTCTaGTTAAAAGCTAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: SKIHMEVQVPCPRPKNDSNRFDF*LKASAH
Trigger: GTGTGCACTAGCTTTTAACCAGAAGTCAAACCTGTT...TGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAGCATTTCCGCTGGTGTaGCTGATGGCTGACTTGTTG +
Preference number: 4 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIAFPLV*LMADLL
Trigger: CAACAAGTCAGCCATCAGCCACACCAGCGGAAATGC...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp TCAAAGGTCCAAATCCAGGTACAATTTCCATGTTTAAGGTATAAGATCCATGGCCTCTTAGAACAAGAGTaGGGTGGGCGTACAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SKVQIQVQFPCLRYKIHGLLEQE*GGRTVD
Trigger: ATCCACTGTACGCCCACCCCACTCTTGTTCTAAGAG...GCCATGGATCTTATACCTTAAACATGGAAATTGTACCTGGATTTGGACCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp GTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATGAGCAGGAGAGTGTCATaGAAGCTAATGGAAGAACAC +
Preference number: 4 (lower is better)
Translates to: VQVNLQGPDHGPKSKIHMSRRVS*KLMEEH
Trigger: GTGTTCTTCCATTAGCTTCCATGACACTCTCCTGCT...CATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp ATTTCATTACCAAAATTTGCAAGTGAGGTCCAAATCTTATCCCTGGGTCCAGATTTAGCCACCCGAGCATaGCTAAAACACTGGGTACTG +
Preference number: 4 (lower is better)
Translates to: ISLPKFASEVQILSLGPDLATRA*LKHWVL
Trigger: CAGTACCCAGTGTTTTAGCCATGCTCGGGTGGCTAA...ATCTGGACCCAGGGATAAGATTTGGACCTCACTTGCAAATTTTGGTAATGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGGAAAATCAATCATTGTaGAGGTCAGGGTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWENQSL*RSGLVF
Trigger: AAAAACCAACCCTGACCTCCACAATGATTGATTTTC...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
CDS-3UTR TCA 90 bp AGGTTTAGTTCCAAGGTGCAGGTTCAAAGTTCATATCCACACACAAGGTCCAACACCAAAATTTGCAAGTaGGGTCCAAATCTTATCCCT +
Preference number: 4 (lower is better)
Translates to: RFSSKVQVQSSYPHTRSNTKICK*GPNLIP
Trigger: AGGGATAAGATTTGGACCTCACTTGCAAATTTTGGT...GTTGGACCTTGTGTGTGGATATGAACTTTGAACCTGCACCTTGGAACTAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR GCA 90 bp AAGTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACAGTGGAGTTGATTTCCTaGATGGAAACCTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: KSKSIYKVQIMVLSPRYTVELIS*METWNR
Trigger: CCTATTCCAGGTTTCCATGCAGGAAATCAACTCCAC...TGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440261.6
ENST00000448461.5
CDS-3UTR CCA 90 bp ATCCAGGTACAATTTCCATGTTTAAGGTATAAGATCCATGGCCCAATAAAAAGCTTGAGCGACGACTTCTaGCTAAATCCATGCCCACAC +
Preference number: 4 (lower is better)
Translates to: IQVQFPCLRYKIHGPIKSLSDDF*LNPCPH
Trigger: GTGTGGGCATGGATTTAGCCAGAAGTCGTCGCTCAA...GCTTTTTATTGGGCCATGGATCTTATACCTTAAACATGGAAATTGTACCTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATATTGAGCGACGACTTCTaGCTAAATCCATGCCCACAC +
Preference number: 4 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKILSDDF*LNPCPH
Trigger: GTGTGGGCATGGATTTAGCCAGAAGTCGTCGCTCAA...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAGGGGTGGGCGTACAGTaGATAGATTTGACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIGVGVQ*IDLTPS
Trigger: ACTTGGAGTCAAATCTATCCACTGTACGCCCACCCC...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAAAGGCCAAGGTGGCGTaGCTATGTTTAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIKAKVA*LCLSPE
Trigger: CTCAGGACTTAAACATAGCCACGCCACCTTGGCCTT...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
3UTR CAA 72 bp TTTCAGATGCAAAATGGTTATGACTTGTTCCTGATGTaGGAGTTGTGTGTTGACCTCAGTGTTACCACTGAG +
Preference number: 4 (lower is better)
Translates to: FQMQNGYDLFLM*ELCVDLSVTTE
Trigger: CTCAGTGGTAACACTGAGGTCAACACACAACTCCAACATCAGGAACAAGTCATAACCATTTTGCATCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR TCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAGTGCTTAATGAGCTCTaGCTTTTCACGAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIVLNEL*LFTKAS
Trigger: CGAGGCTTTCGTGAAAAGTCAGAGCTCATTAAGCAC...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp TTTCAGATGCAAAATGGTTATGACTTGTTCCTGATGTTGGAGTTGTGTGTTGACATAGGAGAGCACCAATaGGACCAGATTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: FQMQNGYDLFLMLELCVDIGEHQ*DQIPEI
Trigger: AATCTCAGGAATCTGGTCTCATTGGTGCTCTCCTAT...GTCAACACACAACTCCAACATCAGGAACAAGTCATAACCATTTTGCATCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR TCA 90 bp ATAATCATTCTGAGTTATAGGACTGGGGACCAGGAATTTAGGTTCAACTCTAAGCCCACAGTCTACATTTaGGGCTCATATTCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: IIILSYRTGDQEFRFNSKPTVYI*GSYSRL
Trigger: CAACCTTGAATATGAGCCTCAAATGTAGACTGTGGG...CTTAGAGTTGAACCTAAATTCCTGGTCCCCAGTCCTATAACTCAGAATGATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR GCA 90 bp AATCCAAGTCAGAGGTTTAGTTCCAAGGTGCAGGTTCAAAGTTCATATCCACACGGTTTAGTTCCAAGGTaGAGGTTCAAAGTTCATATC +
Preference number: 4 (lower is better)
Translates to: NPSQRFSSKVQVQSSYPHGLVPR*RFKVHI
Trigger: GATATGAACTTTGAACCTGCACCTTGGAACTAAACC...GTGTGGATATGAACTTTGAACCTGCACCTTGGAACTAAACCTCTGACTTGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR CCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATACCAAGAGCTTATTGGTaGTCTCTGGAACAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIPRAYW*SLEQAR
Trigger: TCTAGCCTGTTCCAGAGACCACCAATAAGCTCTTGG...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATAATGTCTGATGAGGTATaGCTTGCAGCTAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIMSDEV*LAAKAS
Trigger: CGAGGCTTTAGCTGCAAGCCATACCTCATCAGACAT...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATACTGGAGACTGAACTCTaGGTAAAATCTAAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKILETEL*VKSKGG
Trigger: CCCACCTTTAGATTTTACTCAGAGTTCAGTCTCCAG...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR TCA 90 bp ATTTCATTACCAAAATTTGCAAGTGAGGTCCAAATCTTATCCCTGGGTCCAGATTTCAGATCCATTTCATaGCCAAGGTTCAGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: ISLPKFASEVQILSLGPDFRSIS*PRFRSK
Trigger: CTTAGACCTGAACCTTGGTCATGAAATGGATCTGAA...ATCTGGACCCAGGGATAAGATTTGGACCTCACTTGCAAATTTTGGTAATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR TCA 90 bp ATCCAGGTACAATTTCCATGTTTAAGGTATAAGATCCATGGCCCAATAAAAAGCTTCAACTCTAAGGTCTaGTGGTCACGTCTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: IQVQFPCLRYKIHGPIKSFNSKV*WSRLRS
Trigger: AGACCTTAGACGTGACCATCAGACCTTAGAGTTGAA...GCTTTTTATTGGGCCATGGATCTTATACCTTAAACATGGAAATTGTACCTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR TCA 90 bp ATCCAGGTACAATTTCCATGTTTAAGGTATAAGATCCATGGCCCAATAAAAAGCCCCACAGTCTACATTTaGGGCTCATATTCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: IQVQFPCLRYKIHGPIKSPTVYI*GSYSRL
Trigger: CAACCTTGAATATGAGCCTCAAATGTAGACTGTGGG...GCTTTTTATTGGGCCATGGATCTTATACCTTAAACATGGAAATTGTACCTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR GCA 90 bp TCCAAAGTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATAGGTTTAGTTCCAAGGTaGAGGTTCAAAGTTCATATC +
Preference number: 4 (lower is better)
Translates to: SKVQVNLQGPDHGPKSKIGLVPR*RFKVHI
Trigger: GATATGAACTTTGAACCTGCACCTTGGAACTAAACC...TATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGACTTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR TCA 90 bp CATAATATTAGAATAGAGATGGTGTTTATCCAGCAGACTTTTTGGTATCCTGGTGATGCAAAATGGTTATaGCTTGTTCCTGATGTTGGA +
Preference number: 4 (lower is better)
Translates to: HNIRIEMVFIQQTFWYPGDAKWL*LVPDVG
Trigger: TCCAACATCAGGAACAAGTCATAACCATTTTGCATC...ACCAGGATACCAAAAAGTCTGCTGGATAAACACCATCTCTATTCTAATATTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS GCA 90 bp GCTTCCGCAGTCCAGCCCAGTAGCTGCTCCCGCGGGGCCCACATCTaGGCGCGCACGCACGCACGAAGCAAACGAGGTAGCAGCACCGTG +
Preference number: 5 (lower is better)
Translates to: ASAVQPSSCSRGAHI*ARTHARSKRGSSTV
Trigger: CACGGTGCTGCTACCTCGTTTGCTTCGTGCGTGCGTGCGCGCGCAGATGTGGGCCCCGCGGGAGCAGCTACTGGGCTGGACTGCGGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354698.8
ENST00000412564.5
ENST00000427617.6
ENST00000440261.6
CDS GCA 90 bp GCAGAATCCTTGGCAGGCAGAGCTTCCGCAGTCCAGCCCAGTAGCTaGTCCCGCGGGGCCCACATCTGCGCGCGCACGCACGCACGAAGC +
Preference number: 5 (lower is better)
Translates to: AESLAGRASAVQPSS*SRGAHICARTHARS
Trigger: GCTTCGTGCGTGCGTGCGCGCGCAGATGTGGGCCCCGCGGGAGCAGCTACTGGGCTGGACTGCGGAAGCTCTGCCTGCCAAGGATTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354698.8
ENST00000412564.5
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR CAA 90 bp GATGCAGTTCCAAAGACGCGGGTGTTGGGCCATGTGCAAGGACCAAGTCCATGTGGCCAGGCAGAATCCTaGGCAGGCAGAGCTTCCGCA +
Preference number: 5 (lower is better)
Translates to: DAVPKTRVLGHVQGPSPCGQAES*AGRASA
Trigger: TGCGGAAGCTCTGCCTGCCAAGGATTCTGCCTGGCC...ACATGGACTTGGTCCTTGCACATGGCCCAACACCCGCGTCTTTGGAACTGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR CAA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCAGCCTCCTTCCACTCGTaGATCTTCTGCTTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PWRSTTSSEREWTKASGPASFHS*IFCFSP
Trigger: GGGGCTGAAGCAGAAGATCAACGAGTGGAAGGAGGC...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGGCCTCCTTCCACTCGTaGATCTTCTGCTTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLASFHS*IFCFSP
Trigger: GGGGCTGAAGCAGAAGATCAACGAGTGGAAGGAGGC...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCAGCTAGATCCCTGTCATaGAAGGCCAAGGTGGCGTGG +
Preference number: 5 (lower is better)
Translates to: PWRSTTSSEREWTKASGPARSLS*KAKVAW
Trigger: CCACGCCACCTTGGCCTTCAATGACAGGGATCTAGC...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGCAAGGGGACCGTCACTaGACACCTCTGCTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLQGDRH*TPLLSE
Trigger: TTCTGAGAGCAGAGGTGTCAAGTGACGGTCCCCTTG...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGAGCAGGAGCCCTGATCTaGGACTTCCCAGTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: VRQTVRTWAIWALECEERAGALI*DFPVPE
Trigger: TTCTGGAACTGGGAAGTCCAAGATCAGGGCTCCTGC...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CAA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGTGTGTACTCAGGTGGTaGCGGAGGACTGACTCAACT +
Preference number: 5 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLCVLRW*RRTDST
Trigger: AGTTGAGTCAGTCCTCCGCAACCACCTGAGTACACA...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp GAGGCACTGGGGCCTGAGTGGATAGCTCTCCAAGGTACACTCATTGACACAGGGGTTCTCCGATGTGATTaGAGCGACGACTTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: EALGPEWIALQGTLIDTGVLRCD*SDDFWL
Trigger: TAGCCAGAAGTCGTCGCTCAAATCACATCGGAGAAC...CCCTGTGTCAATGAGTGTACCTTGGAGAGCTATCCACTCAGGCCCCAGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTGGCCAGGCAGAATCCTaGGCAGGCAGAGCTTCCGCA +
Preference number: 5 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPGQAES*AGRASA
Trigger: TGCGGAAGCTCTGCCTGCCAAGGATTCTGCCTGGCC...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp ATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACGCCTCCTTCCACTCGTaGATCTTCTGCTTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: IMVLSPRYTWRSKSHVQDASFHS*IFCFSP
Trigger: GGGGCTGAAGCAGAAGATCAACGAGTGGAAGGAGGC...GTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440261.6
ENST00000448461.5
CDS-3UTR CAA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTCGTGTGCGAGGAGAGTaGATTTATCACAAAAGCCTC +
Preference number: 5 (lower is better)
Translates to: TVRTWAIWALECEERQMARVRGE*IYHKSL
Trigger: GAGGCTTTTGTGATAAATCAACTCTCCTCGCACACG...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp TATCAGGTAGGGCTAGCCCCAGCCCAAGGGAGTAAGGCAAACTGTCAGAACCTGCGTGTGCGAGGAGAGTaGATTTATCACAAAAGCCTC +
Preference number: 5 (lower is better)
Translates to: YQVGLAPAQGSKANCQNLRVRGE*IYHKSL
Trigger: GAGGCTTTTGTGATAAATCAACTCTCCTCGCACACG...CAGGTTCTGACAGTTTGCCTTACTCCCTTGGGCTGGGGCTAGCCCTACCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp GGAGATCCTACATTCCAGGTACCCCTAGCCCTTCCCCTAAGCAGGCTAACCTTGCACTGGGTACTGAGATaGGAGGATTTAAGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: GDPTFQVPLALPLSRLTLHWVLR*EDLRGA
Trigger: AGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTG...CAAGGTTAGCCTGCTTAGGGGAAGGGCTAGGGGTACCTGGAATGTAGGATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp ATCCAAGGTCCAAGATGCAGTTCCAAAGACGCGGGTGTTGGGCCATGTGCAAGGCACTGGGTACTGAGATaGGAGGATTTAAGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: IQGPRCSSKDAGVGPCARHWVLR*EDLRGA
Trigger: AGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTG...CCTTGCACATGGCCCAACACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CAA 90 bp GAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGATCCATTTCATGACCCAAAGACGCGGGTGTaGGGCCATGTGCAAGGACCA +
Preference number: 5 (lower is better)
Translates to: EVQVPCPRPKNDSDPFHDPKTRV*GHVQGP
Trigger: TGGTCCTTGCACATGGCCCAACACCCGCGTCTTTGG...GTCATGAAATGGATCTGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR CAA 90 bp AATCCAAGTCAGAGGTTTAGTTCCAAGGTGCAGGTTCAAAGTTCATATCCACACGGCCAGGCAGAATCCTaGGCAGGCAGAGCTTCCGCA +
Preference number: 5 (lower is better)
Translates to: NPSQRFSSKVQVQSSYPHGQAES*AGRASA
Trigger: TGCGGAAGCTCTGCCTGCCAAGGATTCTGCCTGGCC...GTGTGGATATGAACTTTGAACCTGCACCTTGGAACTAAACCTCTGACTTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR CAA 90 bp GAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGATCCATTTCATGACGCCTCCTTCCACTCGTaGATCTTCTGCTTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: EVQVPCPRPKNDSDPFHDASFHS*IFCFSP
Trigger: GGGGCTGAAGCAGAAGATCAACGAGTGGAAGGAGGC...GTCATGAAATGGATCTGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440261.6
ENST00000448461.5
CDS-3UTR CAA 90 bp ACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGACAAATGGCTATCCTCTGGTGTGTGTaGAGACATGATCTCCTTACA +
Preference number: 5 (lower is better)
Translates to: TVRTWAIWALECEERQMAILWCV*RHDLLT
Trigger: TGTAAGGAGATCATGTCTCAACACACACCAGAGGAT...AGCCATTTGTCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCACTGATGGCTGACTTGTaGCTAAAATCACATCCTCAC +
Preference number: 5 (lower is better)
Translates to: PWRSTTSSEREWTKASGPLMADL*LKSHPH
Trigger: GTGAGGATGTGATTTTAGCAACAAGTCAGCCATCAG...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp GATGCAGTTCCAAAGACGCGGGTGTTGGGCCATGTGCAAGGACCAAGTCCATGTCTGATGGCTGACTTGTaGCTAAAATCACATCCTCAC +
Preference number: 5 (lower is better)
Translates to: DAVPKTRVLGHVQGPSPCLMADL*LKSHPH
Trigger: GTGAGGATGTGATTTTAGCAACAAGTCAGCCATCAG...ACATGGACTTGGTCCTTGCACATGGCCCAACACCCGCGTCTTTGGAACTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CAA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGATGGCTGATGGCTGACTaGTTGCTAAAATCACATCCT +
Preference number: 5 (lower is better)
Translates to: VRQTVRTWAIWALECEERWLMAD*LLKSHP
Trigger: AGGATGTGATTTTAGCAACAAGTCAGCCATCAGCCA...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp ATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACCAAGGGGACCGTCACTaGACACCTCTGCTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: IMVLSPRYTWRSKSHVQDQGDRH*TPLLSE
Trigger: TTCTGAGAGCAGAGGTGTCAAGTGACGGTCCCCTTG...GTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CAA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTCCAAAGACGCGGGTGTaGGGCCATGTGCAAGGACCA +
Preference number: 5 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPPKTRV*GHVQGP
Trigger: TGGTCCTTGCACATGGCCCAACACCCGCGTCTTTGG...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CAA 90 bp CAAAATGGTTATGACTTGTTCCTGATGTTGGAGTTGTGTGTTGACCTCAGTGTTGGCCAGGCAGAATCCTaGGCAGGCAGAGCTTCCGCA +
Preference number: 5 (lower is better)
Translates to: QNGYDLFLMLELCVDLSVGQAES*AGRASA
Trigger: TGCGGAAGCTCTGCCTGCCAAGGATTCTGCCTGGCC...AACACTGAGGTCAACACACAACTCCAACATCAGGAACAAGTCATAACCATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR CAA 90 bp TCCAGGTCCAAGTCAAAGGTCCAAATCCAGGTACAATTTCCATGTTTAAGGTATGGCCAGGCAGAATCCTaGGCAGGCAGAGCTTCCGCA +
Preference number: 5 (lower is better)
Translates to: SRSKSKVQIQVQFPCLRYGQAES*AGRASA
Trigger: TGCGGAAGCTCTGCCTGCCAAGGATTCTGCCTGGCC...ATACCTTAAACATGGAAATTGTACCTGGATTTGGACCTTTGACTTGGACCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR CAA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTGCTAGATCCCTGTCATaGAAGGCCAAGGTGGCGTGG +
Preference number: 5 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPARSLS*KAKVAW
Trigger: CCACGCCACCTTGGCCTTCAATGACAGGGATCTAGC...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp GGTCCAAGATGCAGTTCCAAAGACGCGGGTGTTGGGCCATGTGCAAGGACCAAGCCAAGCCTAAGTATTTaGAGGTTACATGAACATCTC +
Preference number: 5 (lower is better)
Translates to: GPRCSSKDAGVGPCARTKPSLSI*RLHEHL
Trigger: GAGATGTTCATGTAACCTCAAAATACTTAGGCTTGG...CTTGGTCCTTGCACATGGCCCAACACCCGCGTCTTTGGAACTGCATCTTGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CAA 90 bp CCCTGGAGATCAACCACTTCCAGTGAGAGGGAGTGGACAAAAGCCTCTGGACCATATGGACTTCTGGCTTaGATTCCAATGAGACCAGAT +
Preference number: 5 (lower is better)
Translates to: PWRSTTSSEREWTKASGPYGLLA*IPMRPD
Trigger: ATCTGGTCTCATTGGAATCAAAGCCAGAAGTCCATA...TGGTCCAGAGGCTTTTGTCCACTCCCTCTCACTGGAAGTGGTTGATCTCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457782.5
CDS-3UTR CAA 90 bp GTAAGGCAAACTGTCAGAACCTGGGCCATATGGGCCCTGGAGTGTGAGGAGAGAATCTCTAATATTCTGTaGCCTCCCCAAGAGCTTATT +
Preference number: 5 (lower is better)
Translates to: VRQTVRTWAIWALECEERISNIL*PPQELI
Trigger: AATAAGCTCTTGGGGAGGCAACAGAATATTAGAGAT...TCTCTCCTCACACTCCAGGGCCCATATGGCCCAGGTTCTGACAGTTTGCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTGTTCTCCGATGTGATTaGAGCGACGACTTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIVLRCD*SDDFWL
Trigger: TAGCCAGAAGTCGTCGCTCAAATCACATCGGAGAAC...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp AAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATGGAGGGCAGGAGCCCTGATCTaGGACTTCCCAGTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: KSIYKVQIMVLSPRYTWRAGALI*DFPVPE
Trigger: TTCTGGAACTGGGAAGTCCAAGATCAGGGCTCCTGC...CCTCCATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR CAA 90 bp AAGTCCAAAGTCCAAGTCAATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGGCAGGAGCCCTGATCTaGGACTTCCCAGTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: KSKVQVNLQGPDHGPKSKAGALI*DFPVPE
Trigger: TTCTGGAACTGGGAAGTCCAAGATCAGGGCTCCTGC...CTTGGACTTAGGACCATGATCTGGACCTTGTAAATTGACTTGGACTTTGGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS-3UTR CAA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGTATGGACTTCTGGCTTaGATTCTGCCAATGAGACCA +
Preference number: 5 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWYGLLA*ILPMRP
Trigger: TGGTCTCATTGGCAGAATCAAAGCCAGAAGTCCATA...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354698.8
ENST00000448461.5
CDS-3UTR CAA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTATTTCCTGGGTGGAGTaGATTTCCTGCATGGAAACC +
Preference number: 5 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPISWVE*ISCMET
Trigger: GGTTTCCATGCAGGAAATCAACTCCACCCAGGAAAT...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp TCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAATTTCCTGGGTGGAGTaGATTTCCTGCATGGAAACC +
Preference number: 5 (lower is better)
Translates to: SKIHMEVQVPCPRPKNDSISWVE*ISCMET
Trigger: GGTTTCCATGCAGGAAATCAACTCCACCCAGGAAAT...TGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTGTATCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440261.6
ENST00000448461.5
CDS-3UTR CAA 90 bp CACATGGAGGTCCAAGTCCCATGTCCAAGACCCAAGAATGATTCAGATCCATTTATTTCCTGGGTGGAGTaGATTTCCTGCATGGAAACC +
Preference number: 5 (lower is better)
Translates to: HMEVQVPCPRPKNDSDPFISWVE*ISCMET
Trigger: GGTTTCCATGCAGGAAATCAACTCCACCCAGGAAAT...AAATGGATCTGAATCATTCTTGGGTCTTGGACATGGGACTTGGACCTCCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440261.6
ENST00000448461.5
CDS-3UTR CAA 90 bp ATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGATTTCCTGGGTGGAGTaGATTTCCTGCATGGAAACC +
Preference number: 5 (lower is better)
Translates to: MSTYSSVHITLQTRLLPKISWVE*ISCMET
Trigger: GGTTTCCATGCAGGAAATCAACTCCACCCAGGAAAT...CTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp CAGACTTTTTGGTATCCTGGTAGCACCTCAGTTGCTGTCCATCAATCTTCCAATCTGGTAGCACCTCAGTaGCTGTCCATCAATCTTCCA +
Preference number: 5 (lower is better)
Translates to: QTFWYPGSTSVAVHQSSNLVAPQ*LSINLP
Trigger: TGGAAGATTGATGGACAGCAACTGAGGTGCTACCAG...ATTGGAAGATTGATGGACAGCAACTGAGGTGCTACCAGGATACCAAAAAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR CAA 90 bp GTGTTTATCCAGCAGACTTTTTGGTATCCTGGTAGCACCTCAGTTGCTGTCCATGACTTGTTCCTGATGTaGGAGTTGTGTGTTGACCTC +
Preference number: 5 (lower is better)
Translates to: VFIQQTFWYPGSTSVAVHDLFLM*ELCVDL
Trigger: GAGGTCAACACACAACTCCAACATCAGGAACAAGTC...ATGGACAGCAACTGAGGTGCTACCAGGATACCAAAAAGTCTGCTGGATAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR CAA 90 bp CAGATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAAGGCTCATATTCAAGGTaGAGTTACAAGGCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: QIMVLSPRYTWRSKSHVQGSYSR*SYKAQS
Trigger: ACTTTGGGCCTTGTAACTCAACCTTGAATATGAGCC...TTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR CAA 90 bp TCCCTGTTTAAATTTCAGATCCAAGGTCCAAGATGCAGTTCCAAAGACGCGGGTTATGGACTTCTGGCTTaGATTCTGCCAATGAGACCA +
Preference number: 5 (lower is better)
Translates to: SLFKFQIQGPRCSSKDAGYGLLA*ILPMRP
Trigger: TGGTCTCATTGGCAGAATCAAAGCCAGAAGTCCATA...ACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGATCTGAAATTTAAACAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CAA 90 bp AATTTACAAGGTCCAGATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTTCTCCGATGTGATTaGAGCGACGACTTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: NLQGPDHGPKSKIHMEVQVLRCD*SDDFWL
Trigger: TAGCCAGAAGTCGTCGCTCAAATCACATCGGAGAAC...TTGGACCTCCATGTGTATCTTGGACTTAGGACCATGATCTGGACCTTGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CAA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTCGTGTGCGAGGAGAGTaGATTTATCACAAAAGCCTC +
Preference number: 5 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPRVRGE*IYHKSL
Trigger: GAGGCTTTTGTGATAAATCAACTCTCCTCGCACACG...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTCACTGGGTACTGAGATaGGAGGATTTAAGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPHWVLR*EDLRGA
Trigger: AGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTG...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp CAGATCATGGTCCTAAGTCCAAGATACACATGGAGGTCCAAGTCCCATGTCCAATATGGACTTCTGGCTTaGATTCCAATGAGACCAGAT +
Preference number: 5 (lower is better)
Translates to: QIMVLSPRYTWRSKSHVQYGLLA*IPMRPD
Trigger: ATCTGGTCTCATTGGAATCAAAGCCAGAAGTCCATA...TTGGACATGGGACTTGGACCTCCATGTGTATCTTGGACTTAGGACCATGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440261.6
CDS-3UTR CAA 90 bp AGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTTCCGCTGGAGTCACTGGTCCTATTaGATCACCACAATACTTGAG +
Preference number: 5 (lower is better)
Translates to: SSVHITLQTRLLPKHFRWSHWSY*ITTILE
Trigger: CTCAAGTATTGTGGTGATCAAATAGGACCAGTGACT...CCAGCGGAAATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457782.5
CDS-3UTR CAA 90 bp ATTTCATTACCAAAATTTGCAAGTGAGGTCCAAATCTTATCCCTGGGTCCAGATTGTGTACTCAGGTGGTaGCGGAGGACTGACTCAACT +
Preference number: 5 (lower is better)
Translates to: ISLPKFASEVQILSLGPDCVLRW*RRTDST
Trigger: AGTTGAGTCAGTCCTCCGCAACCACCTGAGTACACA...ATCTGGACCCAGGGATAAGATTTGGACCTCACTTGCAAATTTTGGTAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CAA 90 bp CATTCCTTCTCTCTCTCCAAGTCCTTTTTCCTCTCTAGCATCAAAACCAAGCCTATCCTCTGGTGTGTGTaGAGACATGATCTCCTTACA +
Preference number: 5 (lower is better)
Translates to: HSFSLSKSFFLSSIKTKPILWCV*RHDLLT
Trigger: TGTAAGGAGATCATGTCTCAACACACACCAGAGGAT...AGGCTTGGTTTTGATGCTAGAGAGGAAAAAGGACTTGGAGAGAGAGAAGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp CCAAGGTTCAGGTCTAAGGTGAGTTCCAAAATGCAGAACAAATCCAAGTCAGAGTGGCTGATGGCTGACTaGTTGCTAAAATCACATCCT +
Preference number: 5 (lower is better)
Translates to: PRFRSKVSSKMQNKSKSEWLMAD*LLKSHP
Trigger: AGGATGTGATTTTAGCAACAAGTCAGCCATCAGCCA...CTCTGACTTGGATTTGTTCTGCATTTTGGAACTCACCTTAGACCTGAACCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CAA 90 bp TCAGTGTTACCACTGAGGACAGCTGAGTGTATTAACAGGTTTGATTTGGGCACATTCCTGATGTTGGAGTaGTGTGTTGACCTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: SVLPLRTAECINRFDLGTFLMLE*CVDLSV
Trigger: AACACTGAGGTCAACACACAACTCCAACATCAGGAA...TGTGCCCAAATCAAACCTGTTAATACACTCAGCTGTCCTCAGTGGTAACACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR CAA 90 bp CCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTAAGCATTATCTCTAATATTCTGTaGCCTCCCCAAGAGCTTATT +
Preference number: 5 (lower is better)
Translates to: PRTALSTLPYKQGFSLSIISNIL*PPQELI
Trigger: AATAAGCTCTTGGGGAGGCAACAGAATATTAGAGAT...AATGCTTAGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp TCCCTGTTTAAATTTCAGATCCAAGGTCCAAGATGCAGTTCCAAAGACGCGGGTATCTCTAATATTCTGTaGCCTCCCCAAGAGCTTATT +
Preference number: 5 (lower is better)
Translates to: SLFKFQIQGPRCSSKDAGISNIL*PPQELI
Trigger: AATAAGCTCTTGGGGAGGCAACAGAATATTAGAGAT...ACCCGCGTCTTTGGAACTGCATCTTGGACCTTGGATCTGAAATTTAAACAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448461.5
CDS-3UTR CAA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATATGTGTACTCAGGTGGTaGCGGAGGACTGACTCAACT +
Preference number: 5 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKICVLRW*RRTDST
Trigger: AGTTGAGTCAGTCCTCCGCAACCACCTGAGTACACA...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp ATGATGTCCACGTACAGCTCTGTCCACATTACCTTACAAACAAGGCTTCTCCCTCCAAGCCTAAGTATTTaGAGGTTACATGAACATCTC +
Preference number: 5 (lower is better)
Translates to: MMSTYSSVHITLQTRLLPPSLSI*RLHEHL
Trigger: GAGATGTTCATGTAACCTCAAAATACTTAGGCTTGG...AGGGAGAAGCCTTGTTTGTAAGGTAATGTGGACAGAGCTGTACGTGGACATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp CAGACTTTTTGGTATCCTGGTAGCACCTCAGTTGCTGTCCATCAATCTTCCAATATTAACAGGTTTGATTaGGGCACAGGAGATCCTGAT +
Preference number: 5 (lower is better)
Translates to: QTFWYPGSTSVAVHQSSNINRFD*GTGDPD
Trigger: ATCAGGATCTCCTGTGCCCAAATCAAACCTGTTAAT...ATTGGAAGATTGATGGACAGCAACTGAGGTGCTACCAGGATACCAAAAAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR CAA 90 bp AATCCAAGTCAGAGGTTTAGTTCCAAGGTGCAGGTTCAAAGTTCATATCCACACGGCTCATATTCAAGGTaGAGTTACAAGGCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: NPSQRFSSKVQVQSSYPHGSYSR*SYKAQS
Trigger: ACTTTGGGCCTTGTAACTCAACCTTGAATATGAGCC...GTGTGGATATGAACTTTGAACCTGCACCTTGGAACTAAACCTCTGACTTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427617.6
ENST00000448461.5
CDS-3UTR CAA 90 bp TTACCACTGAGGACAGCTGAGTGTATTAACAGGTTTGATTTGGGCACAGGAGATCAAAATGGTTATGACTaGTTCCTGATGTTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: LPLRTAECINRFDLGTGDQNGYD*FLMLEL
Trigger: CAACTCCAACATCAGGAACAAGTCATAACCATTTTG...ATCTCCTGTGCCCAAATCAAACCTGTTAATACACTCAGCTGTCCTCAGTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS-3UTR CAA 90 bp CTAAAACACTGGGTACTGAGATTGGAGGATTTAAGAGGAGCTGTGTTTAAAATATGGCTGATGGCTGACTaGTTGCTAAAATCACATCCT +
Preference number: 5 (lower is better)
Translates to: LKHWVLRLEDLRGAVFKIWLMAD*LLKSHP
Trigger: AGGATGTGATTTTAGCAACAAGTCAGCCATCAGCCA...TATTTTAAACACAGCTCCTCTTAAATCCTCCAATCTCAGTACCCAGTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354698.8
ENST00000448461.5
ENST00000457782.5
CDS-3UTR CAA 90 bp CATAATATTAGAATAGAGATGGTGTTTATCCAGCAGACTTTTTGGTATCCTGGTTGTTGGAGTTGTGTGTaGACCTCAGTGTTACCACTG +
Preference number: 5 (lower is better)
Translates to: HNIRIEMVFIQQTFWYPGCWSCV*TSVLPL
Trigger: CAGTGGTAACACTGAGGTCAACACACAACTCCAACA...ACCAGGATACCAAAAAGTCTGCTGGATAAACACCATCTCTATTCTAATATTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412564.5
CDS GCA 72 bp TTGGCAGGCAGAGCTTCCGCAGTCCAGCCCAGTAGCTaGTCCCGCGGGGCCCACATCTGCGCGCGCACGCAC +
Preference number: 6 (lower is better)
Translates to: LAGRASAVQPSS*SRGAHICARTH
Trigger: GTGCGTGCGCGCGCAGATGTGGGCCCCGCGGGAGCAGCTACTGGGCTGGACTGCGGAAGCTCTGCCTGCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354698.8
ENST00000412564.5
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
ENST00000457782.5
CDS GCA 72 bp GTCCAGCCCAGTAGCTGCTCCCGCGGGGCCCACATCTaGGCGCGCACGCACGCACGAAGCAAACGAGGTAGC +
Preference number: 6 (lower is better)
Translates to: VQPSSCSRGAHI*ARTHARSKRGS
Trigger: GCTACCTCGTTTGCTTCGTGCGTGCGTGCGCGCGCAGATGTGGGCCCCGCGGGAGCAGCTACTGGGCTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354698.8
ENST00000412564.5
ENST00000427617.6
ENST00000440261.6
ENST00000448461.5
CDS CAA 72 bp TCCAGCAGACTTTTTGGTATCCTGGTAGCACCTCAGTaGCTGTCCATCAATCTTCCAATTCTAGATTTGATA +
Preference number: 6 (lower is better)
Translates to: SSRLFGILVAPQ*LSINLPILDLI
Trigger: TATCAAATCTAGAATTGGAAGATTGATGGACAGCAACTGAGGTGCTACCAGGATACCAAAAAGTCTGCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412564.5