RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF585A (Homo sapiens)

Ensembl gene IDs: ENSG00000196967

Ensembl transcript IDs: ENST00000292841.10, ENST00000356958.8, ENST00000392157.2, ENST00000587817.5, ENST00000588354.1, ENST00000588723.5

Found 406 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCTCGGAAGCTTTCTTGAAGGTGATGGGAGTTCACAAGACACGGTaGTGGGGGTCAAAACACAAAGTGCTGAGGGCCCGTGAGGCTGAG +
Preference number: 1 (lower is better)
Translates to: TSEAFLKVMGVHKTR*WGSKHKVLRAREAE
Trigger: CTCAGCCTCACGGGCCCTCAGCACTTTGTGTTTTGACCCCCAGCACCGTGTCTTGTGAACTCCCATCACCTTCAAGAAAGCTTCCGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR GCA 90 bp AAGATGGGGATGGAGGCACTGCAAAGGTGGAAGAGGAAAGCAAGATaGACGGGCACTGGAGAAGCAGAGCACTCTCAGAACAGTCGGTGC +
Preference number: 1 (lower is better)
Translates to: KMGMEALQRWKRKAR*TGTGEAEHSQNSRC
Trigger: GCACCGACTGTTCTGAGAGTGCTCTGCTTCTCCAGTGCCCGTGCATCTTGCTTTCCTCTTCCACCTTTGCAGTGCCTCCATCCCCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CCA 90 bp TTCTGCTCACACCATACTCATGTAGTAGACAGGAAGCCCAGCTTGTaGTCTCCTGAGATCTCCAGATCATCCCTGGCCCACCCTGGGTCC +
Preference number: 1 (lower is better)
Translates to: FCSHHTHVVDRKPSL*SPEISRSSLAHPGS
Trigger: GGACCCAGGGTGGGCCAGGGATGATCTGGAGATCTCAGGAGACCACAAGCTGGGCTTCCTGTCTACTACATGAGTATGGTGTGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 90 bp GGAGCTGTTGGGTACACCTGCAGATTCAGTCAAAATATGGATGGATaGCGAGGCCTCCCACTGTCGGTCCATGGACACAGGGATCCACAC +
Preference number: 1 (lower is better)
Translates to: GAVGYTCRFSQNMDG*RGLPLSVHGHRDPH
Trigger: GTGTGGATCCCTGTGTCCATGGACCGACAGTGGGAGGCCTCGCCATCCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR GCA 90 bp CCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTTGGGTACACCTaGAGATTCAGTCAAAATATGGATGGATGGCGAGGCCTCCCACTG +
Preference number: 1 (lower is better)
Translates to: PVLDGRCLFGAVGYT*RFSQNMDGWRGLPL
Trigger: CAGTGGGAGGCCTCGCCATCCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR CCA 90 bp CTTTGGAGCTGTTGGGTACACCTGCAGATTCAGTCAAAATATGGATaGATGGCGAGGCCTCCCACTGTCGGTCCATGGACACAGGGATCC +
Preference number: 1 (lower is better)
Translates to: LWSCWVHLQIQSKYG*MARPPTVGPWTQGS
Trigger: GGATCCCTGTGTCCATGGACCGACAGTGGGAGGCCTCGCCATCCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR CCA 90 bp GTCTCTTTGGAGCTGTTGGGTACACCTGCAGATTCAGTCAAAATATaGATGGATGGCGAGGCCTCCCACTGTCGGTCCATGGACACAGGG +
Preference number: 1 (lower is better)
Translates to: VSLELLGTPADSVKI*MDGEASHCRSMDTG
Trigger: CCCTGTGTCCATGGACCGACAGTGGGAGGCCTCGCCATCCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR TCA 90 bp CAGTGTGGAATGTATGTAGGTAGGATACTCAGTTTGGTACTGCCCTaGCATGGAGTTAGAGCTGGGTGTGCTGGACCATGGTGGGAGGAG +
Preference number: 1 (lower is better)
Translates to: QCGMYVGRILSLVLP*HGVRAGCAGPWWEE
Trigger: CTCCTCCCACCATGGTCCAGCACACCCAGCTCTAACTCCATGTCAGGGCAGTACCAAACTGAGTATCCTACCTACATACATTCCACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CCA 90 bp TTACTTCAATGGCAGGATAAGATGGGGATGGAGGCACTGCAAAGGTaGAAGAGGAAAGCAAGATGCACGGGCACTGGAGAAGCAGAGCAC +
Preference number: 1 (lower is better)
Translates to: LLQWQDKMGMEALQR*KRKARCTGTGEAEH
Trigger: GTGCTCTGCTTCTCCAGTGCCCGTGCATCTTGCTTTCCTCTTCCACCTTTGCAGTGCCTCCATCCCCATCTTATCCTGCCATTGAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CCA 90 bp GTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTTaGGTACACCTGCAGATTCAGTCAAAATATGGATGGATGGCGAGG +
Preference number: 1 (lower is better)
Translates to: VIMARSRWSLSLWSC*VHLQIQSKYGWMAR
Trigger: CCTCGCCATCCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR CCA 90 bp ACCGCCATCGTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTTaGAGCTGTTGGGTACACCTGCAGATTCAGTCAAAATATGGATGG +
Preference number: 1 (lower is better)
Translates to: TAIVIMARSRWSLSL*SCWVHLQIQSKYGW
Trigger: CCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGACGATGGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR TCA 90 bp ATCCTGGCATTATGGGAAGTGTCCATGACAACCTTGGCTTTAAGCTaGCTTTGGCCACGGGGTCAATGTCTGCCACACTGCATCACATCC +
Preference number: 1 (lower is better)
Translates to: ILALWEVSMTTLALS*LWPRGQCLPHCITS
Trigger: GGATGTGATGCAGTGTGGCAGACATTGACCCCGTGGCCAAAGTCAGCTTAAAGCCAAGGTTGTCATGGACACTTCCCATAATGCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR TCA 90 bp CAGGGGACCGGTGCTTACTGGTCTCTGAGTTCCCTCAGTATTTATTaGTCATTATCTCTACCATCTCGGAGAGGGGGATGTGGCAGGACA +
Preference number: 1 (lower is better)
Translates to: QGTGAYWSLSSLSIY*SLSLPSRRGGCGRT
Trigger: TGTCCTGCCACATCCCCCTCTCCGAGATGGTAGAGATAATGATCAATAAATACTGAGGGAACTCAGAGACCAGTAAGCACCGGTCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR GCA 90 bp CAGATGTGTTACTTCAATGGCAGGATAAGATGGGGATGGAGGCACTaGAAAGGTGGAAGAGGAAAGCAAGATGCACGGGCACTGGAGAAG +
Preference number: 1 (lower is better)
Translates to: QMCYFNGRIRWGWRH*KGGRGKQDARALEK
Trigger: CTTCTCCAGTGCCCGTGCATCTTGCTTTCCTCTTCCACCTTTGCAGTGCCTCCATCCCCATCTTATCCTGCCATTGAAGTAACACATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CCA 90 bp TTTCTTTTGGACAAAACCGCCATCGTCATCATGGCCCGTTCTCGATaGTCGCTGTCTCTTTGGAGCTGTTGGGTACACCTGCAGATTCAG +
Preference number: 1 (lower is better)
Translates to: FLLDKTAIVIMARSR*SLSLWSCWVHLQIQ
Trigger: CTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGACGATGGCGGTTTTGTCCAAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR TCA 90 bp GGCAGGCTGAGGGTCCCTAAGTGGATCAGTGTTGGCACCAGAATTTaGACCAACATAGACAGCTTTCACTGTTCTGCTCACACCATACTC +
Preference number: 1 (lower is better)
Translates to: GRLRVPKWISVGTRI*TNIDSFHCSAHTIL
Trigger: GAGTATGGTGTGAGCAGAACAGTGAAAGCTGTCTATGTTGGTTCAAATTCTGGTGCCAACACTGATCCACTTAGGGACCCTCAGCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR TCA 90 bp TTACAAGTGAGAAAATTGAGGCCCAGAGGAGGTTTCTGGGCAGGCTaGGGGTCCCTAAGTGGATCAGTGTTGGCACCAGAATTTGAACCA +
Preference number: 1 (lower is better)
Translates to: LQVRKLRPRGGFWAG*GSLSGSVLAPEFEP
Trigger: TGGTTCAAATTCTGGTGCCAACACTGATCCACTTAGGGACCCTCAGCCTGCCCAGAAACCTCCTCTGGGCCTCAATTTTCTCACTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR GCA 90 bp AGATGCACGGGCACTGGAGAAGCAGAGCACTCTCAGAACAGTCGGTaGAAAGGCCCAAAGCCAGAGAAAAGATCCTTGATGTTAAAACAG +
Preference number: 1 (lower is better)
Translates to: RCTGTGEAEHSQNSR*KGPKPEKRSLMLKQ
Trigger: CTGTTTTAACATCAAGGATCTTTTCTCTGGCTTTGGGCCTTTGCACCGACTGTTCTGAGAGTGCTCTGCTTCTCCAGTGCCCGTGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CCA 90 bp TTTAACAAGCTTGTACTGAGCATCTGCTTTGAGCTGGCACCGTGCTaGGCGCCTGGTATACAGCAGAAACAGGACAGACAAAGTCTGGTT +
Preference number: 1 (lower is better)
Translates to: FNKLVLSICFELAPC*APGIQQKQDRQSLV
Trigger: AACCAGACTTTGTCTGTCCTGTTTCTGCTGTATACCAGGCGCCCAGCACGGTGCCAGCTCAAAGCAGATGCTCAGTACAAGCTTGTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR GCA 90 bp TGTTGGCACCAGAATTTGAACCAACATAGACAGCTTTCACTGTTCTaGTCACACCATACTCATGTAGTAGACAGGAAGCCCAGCTTGTGG +
Preference number: 1 (lower is better)
Translates to: CWHQNLNQHRQLSLF*SHHTHVVDRKPSLW
Trigger: CCACAAGCTGGGCTTCCTGTCTACTACATGAGTATGGTGTGAGCAGAACAGTGAAAGCTGTCTATGTTGGTTCAAATTCTGGTGCCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 90 bp AACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCTGGGAGTaGGAAAAGGGACTAAAAAGGGATAGGAAAGAAGTTAGGGAAGTG +
Preference number: 1 (lower is better)
Translates to: NYRDGNRLVIAKGWE*EKGLKRDRKEVREV
Trigger: CACTTCCCTAACTTCTTTCCTATCCCTTTTTAGTCCCTTTTCCCACTCCCAGCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 90 bp CTGTCCCCTATTCTGAGGGTTGTAATAAGTGGTCATCACACAGAATaGAGAGTGGACCTTACTAGACATTGTCACAAGTGGGAAGAGGTA +
Preference number: 1 (lower is better)
Translates to: LSPILRVVISGHHTE*RVDLTRHCHKWEEV
Trigger: TACCTCTTCCCACTTGTGACAATGTCTAGTAAGGTCCACTCTCCATTCTGTGTGATGACCACTTATTACAACCCTCAGAATAGGGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR TCA 90 bp AGACATTGTCACAAGTGGGAAGAGGTAACAGACACCATGCTGGAGTaGGGTGATTGTAAAAGAGGTAATGAGGAGATCTCCAGAAACTGT +
Preference number: 1 (lower is better)
Translates to: RHCHKWEEVTDTMLE*GDCKRGNEEISRNC
Trigger: ACAGTTTCTGGAGATCTCCTCATTACCTCTTTTACAATCACCTCACTCCAGCATGGTGTCTGTTACCTCTTCCCACTTGTGACAATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR TCA 90 bp TCAGCTTCTTTAATTGTGCCCAAGTCGGCGGCTCTGCCTTCTTGGTaGATGGCAACTTCATCTATTCTTCTGACATCACCATTTTATCTT +
Preference number: 1 (lower is better)
Translates to: SASLIVPKSAALPSW*MATSSILLTSPFYL
Trigger: AAGATAAAATGGTGATGTCAGAAGAATAGATGAAGTTGCCATTCACCAAGAAGGCAGAGCCGCCGACTTGGGCACAATTAAAGAAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR CCA 90 bp CACACACACACACACACACACAAGGACTCCACTTATACAATATTATaGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCC +
Preference number: 1 (lower is better)
Translates to: HTHTHTHKDSTYTIL*KRQNYRDGNRLVIA
Trigger: GGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 90 bp GGCCAGGCGTCATGGCCCTTTCCAGCCCTAAACATATGGTTGTGTTaGTTTTCATATAAGTTATTAATCTGTTACATGAAAGTTACATCC +
Preference number: 1 (lower is better)
Translates to: GQASWPFPALNIWLC*FSYKLLICYMKVTS
Trigger: GGATGTAACTTTCATGTAACAGATTAATAACTTATATGAAAACCAACACAACCATATGTTTAGGGCTGGAAAGGGCCATGACGCCTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 90 bp ACTACTCTGAGAGGAATGCTGATAATGTGGGAGGCTATGCATATGTaGATTAGGGGATATATGGGAAACCTCTGTAATTTCTACCCAATT +
Preference number: 1 (lower is better)
Translates to: TTLRGMLIMWEAMHM*IRGYMGNLCNFYPI
Trigger: AATTGGGTAGAAATTACAGAGGTTTCCCATATATCCCCTAATCCACATATGCATAGCCTCCCACATTATCAGCATTCCTCTCAGAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 90 bp ACCAATTGTAACAAATATACTACTCTGAGAGGAATGCTGATAATGTaGGAGGCTATGCATATGTGGATTAGGGGATATATGGGAAACCTC +
Preference number: 1 (lower is better)
Translates to: TNCNKYTTLRGMLIM*EAMHMWIRGYMGNL
Trigger: GAGGTTTCCCATATATCCCCTAATCCACATATGCATAGCCTCCCACATTATCAGCATTCCTCTCAGAGTAGTATATTTGTTACAATTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CAA 90 bp CTGTTCTGCTCACACCATACTCATGTAGTAGACAGGAAGCCCAGCTaGTGGTCTCCTGAGATCTCCAGATCATCCCTGGCCCACCCTGGG +
Preference number: 2 (lower is better)
Translates to: LFCSHHTHVVDRKPS*WSPEISRSSLAHPG
Trigger: CCCAGGGTGGGCCAGGGATGATCTGGAGATCTCAGGAGACCACAAGCTGGGCTTCCTGTCTACTACATGAGTATGGTGTGAGCAGAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATGGTTTCTGGGCAGGCTaGGGGTCCCTAAGTGGATCA +
Preference number: 2 (lower is better)
Translates to: RIESARLDADGSGPLPMDGFWAG*GSLSGS
Trigger: TGATCCACTTAGGGACCCTCAGCCTGCCCAGAAACC...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR TCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATCAAAACACAAAGTGCTaGGGGCCCGTGAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: RIESARLDADGSGPLPMDQNTKC*GPVRLR
Trigger: TCTCAGCCTCACGGGCCCTCAGCACTTTGTGTTTTG...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR TCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATACGGAAACAGACTGGTaGTTGCCAAGGGCTGGGAGT +
Preference number: 2 (lower is better)
Translates to: RIESARLDADGSGPLPMDTETDW*LPRAGS
Trigger: ACTCCCAGCCCTTGGCAATCACCAGTCTGTTTCCGT...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CAA 90 bp CGTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTaGGGTACACCTGCAGATTCAGTCAAAATATGGATGGATGGCGAG +
Preference number: 2 (lower is better)
Translates to: RHHGPFSMVAVSLEL*GTPADSVKIWMDGE
Trigger: CTCGCCATCCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR TCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCCAGCATCCACCGTATTaGGGGCATTCCCACATGCTG +
Preference number: 2 (lower is better)
Translates to: LILTGCCHWALLAWIPSIQHPPY*GHSHML
Trigger: CAGCATGTGGGAATGCCCTCAATACGGTGGATGCTG...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATGGGTTAACGGGACAATaGGGAGCCAAGAGATACCAT +
Preference number: 2 (lower is better)
Translates to: RIESARLDADGSGPLPMDGLTGQ*GAKRYH
Trigger: ATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCC...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CAA 90 bp AACCGCCATCGTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTaGGAGCTGTTGGGTACACCTGCAGATTCAGTCAAAATATGGATG +
Preference number: 2 (lower is better)
Translates to: NRHRHHGPFSMVAVS*ELLGTPADSVKIWM
Trigger: CATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGACGATGGCGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR TCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCAGAGGAAAAGGTCTATaGGGCTGGGACCTCATCCTC +
Preference number: 2 (lower is better)
Translates to: LILTGCCHWALLAWIPSIRGKGL*GWDLIL
Trigger: GAGGATGAGGTCCCAGCCTCATAGACCTTTTCCTCT...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATAGTGGAAACATGCCATaGTCCACTTGCTCCAACAAG +
Preference number: 2 (lower is better)
Translates to: RIESARLDADGSGPLPMDSGNMP*STCSNK
Trigger: CTTGTTGGAGCAAGTGGATCATGGCATGTTTCCACT...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR CCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATTCTGTGCGGGGCATCTaGTCAACCTCGATATTATTG +
Preference number: 2 (lower is better)
Translates to: RIESARLDADGSGPLPMDSVRGI*STSILL
Trigger: CAATAATATCGAGGTTGACCAGATGCCCCGCACAGA...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR CCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATGTAGGATACTCAGTTTaGTACTGCCCTGACATGGAG +
Preference number: 2 (lower is better)
Translates to: RIESARLDADGSGPLPMDVGYSV*YCPDME
Trigger: CTCCATGTCAGGGCAGTACCAAACTGAGTATCCTAC...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR GCA 90 bp GGGTACACCTGCAGATTCAGTCAAAATATGGATGGATGGCGAGGCCTCCCACTGTTGATGGTGCTTGATTaGAGTGTTTCTGTCTCCGTG +
Preference number: 2 (lower is better)
Translates to: GYTCRFSQNMDGWRGLPLLMVLD*SVSVSV
Trigger: CACGGAGACAGAAACACTGCAATCAAGCACCATCAA...CAGTGGGAGGCCTCGCCATCCATCCATATTTTGACTGAATCTGCAGGTGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR CCA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCATCCCTGGCCCACCCTaGGTCCATCATTCCATTGTG +
Preference number: 2 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGIPGPP*VHHSIV
Trigger: CACAATGGAATGATGGACCCAGGGTGGGCCAGGGAT...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCACAGGATGCTGTCATTaGGCCCTGCTGGCTTGGATC +
Preference number: 2 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGTGCCH*ALLAWI
Trigger: GATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGT...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp TGGAGTAGAGTGTGGTGGGGAGGTGTAGGATATACCATAAATAGTCACACTGGGGTGATTGCCAAGGGCTaGGAGTGGGAAAAGGGACTA +
Preference number: 2 (lower is better)
Translates to: WSRVWWGGVGYTINSHTGVIAKG*EWEKGL
Trigger: TAGTCCCTTTTCCCACTCCCAGCCCTTGGCAATCAC...CCCAGTGTGACTATTTATGGTATATCCTACACCTCCCCACCACACTCTACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CAA 90 bp GGCATTATGGGAAGTGTCCATGACAACCTTGGCTTTAAGCTGACTTaGGCCACGGGGTCAATGTCTGCCACACTGCATCACATCCATTAT +
Preference number: 2 (lower is better)
Translates to: GIMGSVHDNLGFKLT*ATGSMSATLHHIHY
Trigger: ATAATGGATGTGATGCAGTGTGGCAGACATTGACCCCGTGGCCAAAGTCAGCTTAAAGCCAAGGTTGTCATGGACACTTCCCATAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR TCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCGACACCATGCTGGAGTaGGGTGATTGTAAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: LILTGCCHWALLAWIPSIDTMLE*GDCKRG
Trigger: ACCTCTTTTACAATCACCTCACTCCAGCATGGTGTC...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATGGTTTCTGGGCAGGCTaGGGGTCCCTAAGTGGATCA +
Preference number: 2 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYGFWAG*GSLSGS
Trigger: TGATCCACTTAGGGACCCTCAGCCTGCCCAGAAACC...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp GTCTCTGTGAGCACAGGGTTGGGGCTAGGGTTACAGATTAACAGCATCTCAAGGGACACGGTAACAGTCTaGTCTCTCTTTTCCCATTTC +
Preference number: 2 (lower is better)
Translates to: VSVSTGLGLGLQINSISRDTVTV*SLFSHF
Trigger: GAAATGGGAAAAGAGAGATCAGACTGTTACCGTGTC...CCTTGAGATGCTGTTAATCTGTAACCCTAGCCCCAACCCTGTGCTCACAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR GCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATGCTGTCATTGGGCCCTaGTGGCTTGGATCCCATCCA +
Preference number: 2 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYAVIGP*WLGSHP
Trigger: TGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGC...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp TGGAGTAGAGTGTGGTGGGGAGGTGTAGGATATACCATAAATAGTCACACTGGGCACAAGACACGGTGCTaGGGGTCAAAACACAAAGTG +
Preference number: 2 (lower is better)
Translates to: WSRVWWGGVGYTINSHTGHKTRC*GSKHKV
Trigger: CACTTTGTGTTTTGACCCCCAGCACCGTGTCTTGTG...CCCAGTGTGACTATTTATGGTATATCCTACACCTCCCCACCACACTCTACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR CCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAGGTCATCACACAGAATaGAGAGTGGACCTTACTAGA +
Preference number: 2 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKGHHTE*RVDLTR
Trigger: TCTAGTAAGGTCCACTCTCCATTCTGTGTGATGACC...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCCCGCATGAAGCAATGTaGGAAATTGGGAATCAGCAG +
Preference number: 2 (lower is better)
Translates to: LILTGCCHWALLAWIPSIPHEAM*EIGNQQ
Trigger: CTGCTGATTCCCAATTTCCCACATTGCTTCATGCGG...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAATGGAGATGCAATCTTaGGGGAAGTACAGTAGCCAA +
Preference number: 2 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKMEMQS*GKYSSQ
Trigger: TTGGCTACTGTACTTCCCCCAAGATTGCATCTCCAT...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATGATGTGTTACTTCAATaGCAGGATAAGATGGGGATG +
Preference number: 2 (lower is better)
Translates to: RIESARLDADGSGPLPMDDVLLQ*QDKMGM
Trigger: CATCCCCATCTTATCCTGCCATTGAAGTAACACATC...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR TCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAGAGTTGGAAGAACTATaGCAGCAGAAGGGAGATTTA +
Preference number: 2 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKELEEL*QQKGDL
Trigger: TAAATCTCCCTTCTGCTGTCATAGTTCTTCCAACTC...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp GAATCAGCAGACATTGGGTTAACGGGACAATGGGGAGCCAAGAGATACCATCAAGACACCATGCTGGAGTaGGGTGATTGTAAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: ESADIGLTGQWGAKRYHQDTMLE*GDCKRG
Trigger: ACCTCTTTTACAATCACCTCACTCCAGCATGGTGTC...TTGATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCCAATGTCTGCTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCTACAGTAGCCAAGGGTaGCTAAGGAACCGCATGAAG +
Preference number: 2 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGYSSQG*LRNRMK
Trigger: CTTCATGCGGTTCCTTAGTCACCCTTGGCTACTGTA...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR GCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTGTAAGTCACCGCCATTaGCTGAGGGGAAGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSVSHRH*LRGRKK
Trigger: TTTCTTCCTTCCCCTCAGGCAATGGCGGTGACTTAC...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp TGGAGTAGAGTGTGGTGGGGAGGTGTAGGATATACCATAAATAGTCACACTGGGGTAAAACAGGAAAAATaGCCAGGCGTCATGGCCCTT +
Preference number: 2 (lower is better)
Translates to: WSRVWWGGVGYTINSHTGVKQEK*PGVMAL
Trigger: AAGGGCCATGACGCCTGGCCATTTTTCCTGTTTTAC...CCCAGTGTGACTATTTATGGTATATCCTACACCTCCCCACCACACTCTACTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR CCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCGGTCATCACACAGAATaGAGAGTGGACCTTACTAGA +
Preference number: 2 (lower is better)
Translates to: LILTGCCHWALLAWIPSIGHHTE*RVDLTR
Trigger: TCTAGTAAGGTCCACTCTCCATTCTGTGTGATGACC...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTGGAATCAGCAGACATTaGGTTAACGGGACAATGGGG +
Preference number: 2 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSGISRH*VNGTMG
Trigger: CCCCATTGTCCCGTTAACCCAATGTCTGCTGATTCC...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp TGGAGTAGAGTGTGGTGGGGAGGTGTAGGATATACCATAAATAGTCACACTGGGAATGGCAGGATAAGATaGGGATGGAGGCACTGCAAA +
Preference number: 2 (lower is better)
Translates to: WSRVWWGGVGYTINSHTGNGRIR*GWRHCK
Trigger: TTTGCAGTGCCTCCATCCCCATCTTATCCTGCCATT...CCCAGTGTGACTATTTATGGTATATCCTACACCTCCCCACCACACTCTACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR CCA 90 bp AGAAATCTTGGGCAATACCTGGCTTTCCCAGGCAGAGGTCCCTGTGGCCTTCCAGCAGAAGAATTTTCTTaGTACAGAACAAAACGGAGT +
Preference number: 2 (lower is better)
Translates to: RNLGQYLAFPGRGPCGLPAEEFS*YRTKRS
Trigger: ACTCCGTTTTGTTCTGTACCAAGAAAATTCTTCTGC...TGGAAGGCCACAGGGACCTCTGCCTGGGAAAGCCAGGTATTGCCCAAGATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR TCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCGAGTTGGAAGAACTATaGCAGCAGAAGGGAGATTTA +
Preference number: 2 (lower is better)
Translates to: LILTGCCHWALLAWIPSIELEEL*QQKGDL
Trigger: TAAATCTCCCTTCTGCTGTCATAGTTCTTCCAACTC...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR GCA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCGTTCACAAGACACGGTaGTGGGGGTCAAAACACAAA +
Preference number: 2 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGVHKTR*WGSKHK
Trigger: TTTGTGTTTTGACCCCCAGCACCGTGTCTTGTGAAC...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR GCA 90 bp TGGAGTAGAGTGTGGTGGGGAGGTGTAGGATATACCATAAATAGTCACACTGGGTACTCAGTTTGGTACTaGCCTGACATGGAGTTAGAG +
Preference number: 2 (lower is better)
Translates to: WSRVWWGGVGYTINSHTGYSVWY*PDMELE
Trigger: CTCTAACTCCATGTCAGGGCAGTACCAAACTGAGTA...CCCAGTGTGACTATTTATGGTATATCCTACACCTCCCCACCACACTCTACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR CCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTCCGCATGAAGCAATGTaGGAAATTGGGAATCAGCAG +
Preference number: 2 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSPHEAM*EIGNQQ
Trigger: CTGCTGATTCCCAATTTCCCACATTGCTTCATGCGG...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGCAAAACACAAAGTGCTaGGGGCCCGTGAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGQNTKC*GPVRLR
Trigger: TCTCAGCCTCACGGGCCCTCAGCACTTTGTGTTTTG...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCTTAGATACTGCTAGGTaGGTAACGGGAGATAATTGT +
Preference number: 2 (lower is better)
Translates to: LILTGCCHWALLAWIPSILDTAR*VTGDNC
Trigger: ACAATTATCTCCCGTTACTCACCTAGCAGTATCTAA...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATTACAGTAGCCAAGGGTaGCTAAGGAACCGCATGAAG +
Preference number: 2 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYYSSQG*LRNRMK
Trigger: CTTCATGCGGTTCCTTAGTCACCCTTGGCTACTGTA...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp TGGAGTAGAGTGTGGTGGGGAGGTGTAGGATATACCATAAATAGTCACACTGGGACACAGAATGGAGAGTaGACCTTACTAGACATTGTC +
Preference number: 2 (lower is better)
Translates to: WSRVWWGGVGYTINSHTGTQNGE*TLLDIV
Trigger: GACAATGTCTAGTAAGGTCCACTCTCCATTCTGTGT...CCCAGTGTGACTATTTATGGTATATCCTACACCTCCCCACCACACTCTACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR TCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATGCAAGTCTTGGTAGATaGCAGTGGGGACTCAACATA +
Preference number: 2 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYASLGR*QWGLNI
Trigger: TATGTTGAGTCCCCACTGTCATCTACCAAGACTTGC...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGGTCACCGCCATTGCCTaGGGGGAAGGAAGAAAGTTA +
Preference number: 2 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGVTAIA*GEGRKL
Trigger: TAACTTTCTTCCTTCCCCTCAGGCAATGGCGGTGAC...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATAATTGTTTCCCTTCATaGGGCTTGGGCATACAGAGG +
Preference number: 2 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYNCFPS*GLGIQR
Trigger: CCTCTGTATGCCCAAGCCTCATGAAGGGAAACAATT...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp TGGAGTAGAGTGTGGTGGGGAGGTGTAGGATATACCATAAATAGTCACACTGGGGGATTTTTAGGGCAGTaGAACTACTCTGTGTATAAC +
Preference number: 2 (lower is better)
Translates to: WSRVWWGGVGYTINSHTGGFLGQ*NYSVYN
Trigger: GTTATACACAGAGTAGTTTCACTGCCCTAAAAATCC...CCCAGTGTGACTATTTATGGTATATCCTACACCTCCCCACCACACTCTACTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR TCA 90 bp CATCAAAGCTGCAAGCAGCATACTCTCTGGAGTTTGTGTCACCTTTGTGTTCTCATCCAAACAGGAAGCTaGTTTTCTCCTGGTGAAACA +
Preference number: 2 (lower is better)
Translates to: HQSCKQHTLWSLCHLCVLIQTGS*FSPGET
Trigger: TGTTTCACCAGGAGAAAATCAGCTTCCTGTTTGGAT...GAGAACACAAAGGTGACACAAACTCCAGAGAGTATGCTGCTTGCAGCTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR GCA 90 bp TACTTATTTCTGCATAGACACGGTAACAGTCTGATCTCTCTTTTCCCATTTCCCCTGTCTCCGTGGAGGTaGTTTTCTTTGCATCTCCGA +
Preference number: 2 (lower is better)
Translates to: YLFLHRHGNSLISLFPFPLSPWR*FSLHLR
Trigger: TCGGAGATGCAAAGAAAAGCACCTCCACGGAGACAG...GGGAAATGGGAAAAGAGAGATCAGACTGTTACCGTGTCTATGCAGAAATAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR CCA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCGAGGGTTGTAATAAGTaGTCATCACACAGAATGGAG +
Preference number: 2 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGEGCNK*SSHRME
Trigger: CTCCATTCTGTGTGATGACCACTTATTACAACCCTC...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACAGAGGAGATGAAGGGATaGCAGGCAGAACACAGAGGA +
Preference number: 2 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTEEMKG*QAEHRG
Trigger: TCCTCTGTGTTCTGCCTGTCATCCCTTCATCTCCTC...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCGCTCCAAAATACAGTTaGGAAATGTGGACATTATGG +
Preference number: 2 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGAPKYS*EMWTLW
Trigger: CCATAATGTCCACATTTCCCAACTGTATTTTGGAGC...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATATGGAGATGCAATCTTaGGGGAAGTACAGTAGCCAA +
Preference number: 2 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYMEMQS*GKYSSQ
Trigger: TTGGCTACTGTACTTCCCCCAAGATTGCATCTCCAT...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CAA 90 bp CTCCTCCACGTTACCACCTTCCCTATTTCCCATGTCTTATTGTTGTaGTCTTTCCACCAAATCAGTTTTCCTTCATGTGGGCTATTCTTT +
Preference number: 2 (lower is better)
Translates to: LLHVTTFPISHVLLL*SFHQISFPSCGLFF
Trigger: AAAGAATAGCCCACATGAAGGAAAACTGATTTGGTGGAAAGACAACAACAATAAGACATGGGAAATAGGGAAGGTGGTAACGTGGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR TCA 90 bp AGAATTTTCTTGGTACAGAACAAAACGGAGTCTCTTATGTCTACTTATTTCTGCTACCCTGGCTTCTTCTaGGCGCACAAGTTTACCGCA +
Preference number: 2 (lower is better)
Translates to: RIFLVQNKTESLMSTYFCYPGFF*AHKFTA
Trigger: TGCGGTAAACTTGTGCGCTCAGAAGAAGCCAGGGTA...GCAGAAATAAGTAGACATAAGAGACTCCGTTTTGTTCTGTACCAAGAAAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR GCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATATAACAGTGGAAACATaGCATGATCCACTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYITVET*HDPLAP
Trigger: TGGAGCAAGTGGATCATGGCATGTTTCCACTGTTAT...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGCACAAGACACGGTGCTaGGGGTCAAAACACAAAGTG +
Preference number: 2 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVHKTRC*GSKHKV
Trigger: CACTTTGTGTTTTGACCCCCAGCACCGTGTCTTGTG...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACAGCAAGTCTTGGTAGATaGCAGTGGGGACTCAACATA +
Preference number: 2 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTASLGR*QWGLNI
Trigger: TATGTTGAGTCCCCACTGTCATCTACCAAGACTTGC...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR GCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACAGTTCACAAGACACGGTaGTGGGGGTCAAAACACAAA +
Preference number: 2 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTVHKTR*WGSKHK
Trigger: TTTGTGTTTTGACCCCCAGCACCGTGTCTTGTGAAC...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACACATTCCATTGTGCCTTaGGGGGAACTCAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTHSIVP*GELRGK
Trigger: TTTTCCTCTGAGTTCCCCCCAAGGCACAATGGAATG...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp TACTTATTTCTGCATAGACACGGTAACAGTCTGATCTCTCTTTTCCCATTTCCCAAGCAGCATACTCTCTaGAGTTTGTGTCACCTTTGT +
Preference number: 2 (lower is better)
Translates to: YLFLHRHGNSLISLFPFPKQHTL*SLCHLC
Trigger: ACAAAGGTGACACAAACTCCAGAGAGTATGCTGCTT...GGGAAATGGGAAAAGAGAGATCAGACTGTTACCGTGTCTATGCAGAAATAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR TCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACAAATGAGGGTTGGATATaGCCAACTGTGGTAGATTCG +
Preference number: 2 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTNEGWI*PTVVDS
Trigger: CGAATCTACCACAGTTGGTCATATCCAACCCTCATT...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGAATGAGGGTTGGATATaGCCAACTGTGGTAGATTCG +
Preference number: 2 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVNEGWI*PTVVDS
Trigger: CGAATCTACCACAGTTGGTCATATCCAACCCTCATT...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR GCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACACTAATATTAACAGGATaGTGTCATTGGGCCCTGCTG +
Preference number: 2 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTLILTG*CHWALL
Trigger: CAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATGGATTAGGGGATATATaGGAAACCTCTGTAATTTCT +
Preference number: 2 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYGLGDI*ETSVIS
Trigger: AGAAATTACAGAGGTTTCCCATATATCCCCTAATCC...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp AGAATTTTCTTGGTACAGAACAAAACGGAGTCTCTTATGTCTACTTATTTCTGCGCTCTGCCTTCTTGGTaGATGGCAACTTCATCTATT +
Preference number: 2 (lower is better)
Translates to: RIFLVQNKTESLMSTYFCALPSW*MATSSI
Trigger: AATAGATGAAGTTGCCATTCACCAAGAAGGCAGAGC...GCAGAAATAAGTAGACATAAGAGACTCCGTTTTGTTCTGTACCAAGAAAATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR GCA 90 bp AGAATTTTCTTGGTACAGAACAAAACGGAGTCTCTTATGTCTACTTATTTCTGCTGCGTTGGCAACCTCTaGTTGCAGAAATGTGTAACA +
Preference number: 2 (lower is better)
Translates to: RIFLVQNKTESLMSTYFCCVGNL*LQKCVT
Trigger: TGTTACACATTTCTGCAAGCAGAGGTTGCCAACGCA...GCAGAAATAAGTAGACATAAGAGACTCCGTTTTGTTCTGTACCAAGAAAATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR GCA 90 bp TACTTATTTCTGCATAGACACGGTAACAGTCTGATCTCTCTTTTCCCATTTCCCAGTAAGATGTTGTTCTaGAGGAGTAGTAGTCTGATT +
Preference number: 2 (lower is better)
Translates to: YLFLHRHGNSLISLFPFPSKMLF*RSSSLI
Trigger: AATCAGACTACTACTCCTGCAGAACAACATCTTACT...GGGAAATGGGAAAAGAGAGATCAGACTGTTACCGTGTCTATGCAGAAATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR CCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACAACACAGAATGGAGAGTaGACCTTACTAGACATTGTC +
Preference number: 2 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTTQNGE*TLLDIV
Trigger: GACAATGTCTAGTAAGGTCCACTCTCCATTCTGTGT...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACAGAGGGTTGTAATAAGTaGTCATCACACAGAATGGAG +
Preference number: 2 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTEGCNK*SSHRME
Trigger: CTCCATTCTGTGTGATGACCACTTATTACAACCCTC...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGACTCAACATACATTCTaGGGTTTACGTCTGTATACA +
Preference number: 2 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGTQHTF*GLRLYT
Trigger: TGTATACAGACGTAAACCTCAGAATGTATGTTGAGT...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACATTAGATACTGCTAGGTaGGTAACGGGAGATAATTGT +
Preference number: 2 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTLDTAR*VTGDNC
Trigger: ACAATTATCTCCCGTTACTCACCTAGCAGTATCTAA...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACATGCATTATCAAGCCATaGAAAGACATGGAGGAAACT +
Preference number: 2 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTCIIKP*KDMEET
Trigger: AGTTTCCTCCATGTCTTTTCATGGCTTGATAATGCA...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR TCA 90 bp AGAATTTTCTTGGTACAGAACAAAACGGAGTCTCTTATGTCTACTTATTTCTGCCTGATTTTCTCCTGGTaGAACACAAGCAAAACCTCT +
Preference number: 2 (lower is better)
Translates to: RIFLVQNKTESLMSTYFCLIFSW*NTSKTS
Trigger: AGAGGTTTTGCTTGTGTTTCACCAGGAGAAAATCAG...GCAGAAATAAGTAGACATAAGAGACTCCGTTTTGTTCTGTACCAAGAAAATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR CCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGGCTCCAAAATACAGTTaGGAAATGTGGACATTATGG +
Preference number: 2 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVAPKYS*EMWTLW
Trigger: CCATAATGTCCACATTTCCCAACTGTATTTTGGAGC...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 72 bp TATGGATGGATGGCGAGGCCTCCCACTGTCGGTCCATaGACACAGGGATCCACACGCCTTCCCTTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: YGWMARPPTVGP*TQGSTRLPLLS
Trigger: TGAGAGCAAGGGAAGGCGTGTGGATCCCTGTGTCCATGGACCGACAGTGGGAGGCCTCGCCATCCATCCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR TCA 72 bp TCATGTAGTAGACAGGAAGCCCAGCTTGTGGTCTCCTaGGATCTCCAGATCATCCCTGGCCCACCCTGGGTC +
Preference number: 3 (lower is better)
Translates to: SCSRQEAQLVVS*DLQIIPGPPWV
Trigger: GACCCAGGGTGGGCCAGGGATGATCTGGAGATCTCAGGAGACCACAAGCTGGGCTTCCTGTCTACTACATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR GCA 72 bp GTGGAGGAGGTGGGGCAGGTGACACTGACAATGGGGTaGAGGATAGAAAGTGCTAGGCTAGATGCTGATGGG +
Preference number: 3 (lower is better)
Translates to: VEEVGQVTLTMG*RIESARLDADG
Trigger: CCCATCAGCATCTAGCCTAGCACTTTCTATCCTGCACCCCATTGTCAGTGTCACCTGCCCCACCTCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CCA 72 bp CCAGCTTGTGGTCTCCTGAGATCTCCAGATCATCCCTaGCCCACCCTGGGTCCATCATTCCATTGTGCCTTG +
Preference number: 3 (lower is better)
Translates to: PACGLLRSPDHP*PTLGPSFHCAL
Trigger: CAAGGCACAATGGAATGATGGACCCAGGGTGGGCCAGGGATGATCTGGAGATCTCAGGAGACCACAAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 72 bp CAGGCTATCACATGGGGAGAAATCTTGGGCAATACCTaGCTTTCCCAGGCAGAGGTCCCTGTGGCCTTCCAC +
Preference number: 3 (lower is better)
Translates to: QAITWGEILGNT*LSQAEVPVAFH
Trigger: GTGGAAGGCCACAGGGACCTCTGCCTGGGAAAGCCAGGTATTGCCCAAGATTTCTCCCCATGTGATAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR TCA 72 bp GTCGGGCTGGGGGACAGTCAGGTCTTACCCTTCCCATaGGGCCATATCTCAGGCTATCACATGGGGAGAAAT +
Preference number: 3 (lower is better)
Translates to: VGLGDSQVLPFP*GHISGYHMGRN
Trigger: ATTTCTCCCCATGTGATAGCCTGAGATATGGCCTCATGGGAAGGGTAAGACCTGACTGTCCCCCAGCCCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR CCA 72 bp GGGTACACCTGCAGATTCAGTCAAAATATGGATGGATaGCGAGGCCTCCCACTGTCGGTCCATGGACACAGG +
Preference number: 3 (lower is better)
Translates to: GYTCRFSQNMDG*RGLPLSVHGHR
Trigger: CCTGTGTCCATGGACCGACAGTGGGAGGCCTCGCCATCCATCCATATTTTGACTGAATCTGCAGGTGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR CCA 72 bp GACAAAACCGCCATCGTCATCATGGCCCGTTCTCGATaGTCGCTGTCTCTTTGGAGCTGTTGGGTACACCTG +
Preference number: 3 (lower is better)
Translates to: DKTAIVIMARSR*SLSLWSCWVHL
Trigger: CAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGACGATGGCGGTTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR GCA 72 bp GCTTTCTTGAAGGTGATGGGAGTTCACAAGACACGGTaGTGGGGGTCAAAACACAAAGTGCTGAGGGCCCGT +
Preference number: 3 (lower is better)
Translates to: AFLKVMGVHKTR*WGSKHKVLRAR
Trigger: ACGGGCCCTCAGCACTTTGTGTTTTGACCCCCAGCACCGTGTCTTGTGAACTCCCATCACCTTCAAGAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR GCA 72 bp AAGCTTGTACTGAGCATCTGCTTTGAGCTGGCACCGTaGTGGGCGCCTGGTATACAGCAGAAACAGGACAGA +
Preference number: 3 (lower is better)
Translates to: KLVLSICFELAP*WAPGIQQKQDR
Trigger: TCTGTCCTGTTTCTGCTGTATACCAGGCGCCCAGCACGGTGCCAGCTCAAAGCAGATGCTCAGTACAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CCA 72 bp CACCATACTCATGTAGTAGACAGGAAGCCCAGCTTGTaGTCTCCTGAGATCTCCAGATCATCCCTGGCCCAC +
Preference number: 3 (lower is better)
Translates to: HHTHVVDRKPSL*SPEISRSSLAH
Trigger: GTGGGCCAGGGATGATCTGGAGATCTCAGGAGACCACAAGCTGGGCTTCCTGTCTACTACATGAGTATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 72 bp TGGCAGGATAAGATGGGGATGGAGGCACTGCAAAGGTaGAAGAGGAAAGCAAGATGCACGGGCACTGGAGAA +
Preference number: 3 (lower is better)
Translates to: WQDKMGMEALQR*KRKARCTGTGE
Trigger: TTCTCCAGTGCCCGTGCATCTTGCTTTCCTCTTCCACCTTTGCAGTGCCTCCATCCCCATCTTATCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CCA 72 bp GAGCTGTTGGGTACACCTGCAGATTCAGTCAAAATATaGATGGATGGCGAGGCCTCCCACTGTCGGTCCATG +
Preference number: 3 (lower is better)
Translates to: ELLGTPADSVKI*MDGEASHCRSM
Trigger: CATGGACCGACAGTGGGAGGCCTCGCCATCCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR GCA 72 bp GGCACTGGAGAAGCAGAGCACTCTCAGAACAGTCGGTaGAAAGGCCCAAAGCCAGAGAAAAGATCCTTGATG +
Preference number: 3 (lower is better)
Translates to: GTGEAEHSQNSR*KGPKPEKRSLM
Trigger: CATCAAGGATCTTTTCTCTGGCTTTGGGCCTTTGCACCGACTGTTCTGAGAGTGCTCTGCTTCTCCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CCA 72 bp TGTTGGGTACACCTGCAGATTCAGTCAAAATATGGATaGATGGCGAGGCCTCCCACTGTCGGTCCATGGACA +
Preference number: 3 (lower is better)
Translates to: CWVHLQIQSKYG*MARPPTVGPWT
Trigger: TGTCCATGGACCGACAGTGGGAGGCCTCGCCATCCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR CAA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATGAAGCTGCCAAACTTTaGTGCATAGTGGACAGACCG +
Preference number: 3 (lower is better)
Translates to: RIESARLDADGSGPLPMDEAAKL*CIVDRP
Trigger: CGGTCTGTCCACTATGCACAAAAGTTTGGCAGCTTC...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR CAA 90 bp TGGAGTAGAGTGTGGTGGGGAGGTGTAGGATATACCATAAATAGTCACACTGGGTGTAATCCCAATGCTTaGGGTGGCCGAGGTGGGCAA +
Preference number: 3 (lower is better)
Translates to: WSRVWWGGVGYTINSHTGCNPNA*GGRGGQ
Trigger: TTGCCCACCTCGGCCACCCAAAGCATTGGGATTACA...CCCAGTGTGACTATTTATGGTATATCCTACACCTCCCCACCACACTCTACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR TCA 72 bp TTATGGGAAGTGTCCATGACAACCTTGGCTTTAAGCTaGCTTTGGCCACGGGGTCAATGTCTGCCACACTGC +
Preference number: 3 (lower is better)
Translates to: LWEVSMTTLALS*LWPRGQCLPHC
Trigger: GCAGTGTGGCAGACATTGACCCCGTGGCCAAAGTCAGCTTAAAGCCAAGGTTGTCATGGACACTTCCCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR GCA 72 bp GATGGTCGCTGTCTCTTTGGAGCTGTTGGGTACACCTaGAGATTCAGTCAAAATATGGATGGATGGCGAGGC +
Preference number: 3 (lower is better)
Translates to: DGRCLFGAVGYT*RFSQNMDGWRG
Trigger: GCCTCGCCATCCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR CCA 72 bp GCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTTaGGTACACCTGCAGATTCAGTCAAAATATGGATGG +
Preference number: 3 (lower is better)
Translates to: ARSRWSLSLWSC*VHLQIQSKYGW
Trigger: CCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR CCA 72 bp GTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTTaGAGCTGTTGGGTACACCTGCAGATTCAGTCAAAA +
Preference number: 3 (lower is better)
Translates to: VIMARSRWSLSL*SCWVHLQIQSK
Trigger: TTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR CAA 90 bp GTCTCTGTGAGCACAGGGTTGGGGCTAGGGTTACAGATTAACAGCATCTCAAGGTGGAGGTGCTTTTCTTaGCATCTCCGACAGGTTCAT +
Preference number: 3 (lower is better)
Translates to: VSVSTGLGLGLQINSISRWRCFS*HLRQVH
Trigger: ATGAACCTGTCGGAGATGCAAAGAAAAGCACCTCCA...CCTTGAGATGCTGTTAATCTGTAACCCTAGCCCCAACCCTGTGCTCACAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR CAA 90 bp AGAAATCTTGGGCAATACCTGGCTTTCCCAGGCAGAGGTCCCTGTGGCCTTCCAGAGTTTGTGTCACCTTaGTGTTCTCAAGGCCTTTTT +
Preference number: 3 (lower is better)
Translates to: RNLGQYLAFPGRGPCGLPEFVSP*CSQGLF
Trigger: AAAAAGGCCTTGAGAACACAAAGGTGACACAAACTC...TGGAAGGCCACAGGGACCTCTGCCTGGGAAAGCCAGGTATTGCCCAAGATTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR TCA 72 bp ATGTATGTAGGTAGGATACTCAGTTTGGTACTGCCCTaGCATGGAGTTAGAGCTGGGTGTGCTGGACCATGG +
Preference number: 3 (lower is better)
Translates to: MYVGRILSLVLP*HGVRAGCAGPW
Trigger: CCATGGTCCAGCACACCCAGCTCTAACTCCATGTCAGGGCAGTACCAAACTGAGTATCCTACCTACATACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR GCA 72 bp CATCTTCCAGGGATCATGACCATGCAAACATGGAGATaGAATCTTGGGGGAAGTACAGTAGCCAAGGGTGAC +
Preference number: 3 (lower is better)
Translates to: HLPGIMTMQTWR*NLGGSTVAKGD
Trigger: GTCACCCTTGGCTACTGTACTTCCCCCAAGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 72 bp GAGCAGCAAGTGAGCTCTACAGATGTGTTACTTCAATaGCAGGATAAGATGGGGATGGAGGCACTGCAAAGG +
Preference number: 3 (lower is better)
Translates to: EQQVSSTDVLLQ*QDKMGMEALQR
Trigger: CCTTTGCAGTGCCTCCATCCCCATCTTATCCTGCCATTGAAGTAACACATCTGTAGAGCTCACTTGCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CCA 72 bp TTGATCATTATCTCTACCATCTCGGAGAGGGGGATGTaGCAGGACAATAGGGTAATAGTGGGGAGAGGGTCA +
Preference number: 3 (lower is better)
Translates to: LIIISTISERGM*QDNRVIVGRGS
Trigger: TGACCCTCTCCCCACTATTACCCTATTGTCCTGCCACATCCCCCTCTCCGAGATGGTAGAGATAATGATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR CAA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCACAGCATCCACCGTATaGAGGGCATTCCCACATGCT +
Preference number: 3 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGTASTV*RAFPHA
Trigger: AGCATGTGGGAATGCCCTCAATACGGTGGATGCTGT...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR TCA 72 bp GAGATGCAATCTTGGGGGAAGTACAGTAGCCAAGGGTaGCTAAGGAACCGCATGAAGCAATGTGGGAAATTG +
Preference number: 3 (lower is better)
Translates to: EMQSWGKYSSQG*LRNRMKQCGKL
Trigger: CAATTTCCCACATTGCTTCATGCGGTTCCTTAGTCACCCTTGGCTACTGTACTTCCCCCAAGATTGCATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 72 bp GCTCTACAGATGTGTTACTTCAATGGCAGGATAAGATaGGGATGGAGGCACTGCAAAGGTGGAAGAGGAAAG +
Preference number: 3 (lower is better)
Translates to: ALQMCYFNGRIR*GWRHCKGGRGK
Trigger: CTTTCCTCTTCCACCTTTGCAGTGCCTCCATCCCCATCTTATCCTGCCATTGAAGTAACACATCTGTAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR CAA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATAAACTGTTTCCGGAATaGATGAAGTGTGACACACAT +
Preference number: 3 (lower is better)
Translates to: RIESARLDADGSGPLPMDKLFPE*MKCDTH
Trigger: ATGTGTGTCACACTTCATCAATTCCGGAAACAGTTT...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR CAA 90 bp GAATCAGCAGACATTGGGTTAACGGGACAATGGGGAGCCAAGAGATACCATCAAATAGAAACCATTGTATaGCAGGGGGCACACCACTGT +
Preference number: 3 (lower is better)
Translates to: ESADIGLTGQWGAKRYHQIETIV*QGAHHC
Trigger: ACAGTGGTGTGCCCCCTGCAATACAATGGTTTCTAT...TTGATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCCAATGTCTGCTGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CAA 90 bp CGTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTTGGGTACAATTTCCCATGTCTTATaGTTGTTGTCTTTCCACCAA +
Preference number: 3 (lower is better)
Translates to: RHHGPFSMVAVSLELLGTISHVL*LLSFHQ
Trigger: TTGGTGGAAAGACAACAACAATAAGACATGGGAAAT...TGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR CAA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATGCCCTAAACATATGGTaGTGTTGGTTTTCATATAAG +
Preference number: 3 (lower is better)
Translates to: RIESARLDADGSGPLPMDALNIW*CWFSYK
Trigger: CTTATATGAAAACCAACACAACCATATGTTTAGGGC...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR CAA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATACAGCATCCACCGTATaGAGGGCATTCCCACATGCT +
Preference number: 3 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYTASTV*RAFPHA
Trigger: AGCATGTGGGAATGCCCTCAATACGGTGGATGCTGT...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CAA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCTGTTGGCACCAGAATTaGAACCAACATAGACAGCTT +
Preference number: 3 (lower is better)
Translates to: LILTGCCHWALLAWIPSICWHQN*NQHRQL
Trigger: AAGCTGTCTATGTTGGTTCAAATTCTGGTGCCAACA...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR TCA 72 bp CACAAGTGGGAAGAGGTAACAGACACCATGCTGGAGTaGGGTGATTGTAAAAGAGGTAATGAGGAGATCTCC +
Preference number: 3 (lower is better)
Translates to: HKWEEVTDTMLE*GDCKRGNEEIS
Trigger: GGAGATCTCCTCATTACCTCTTTTACAATCACCTCACTCCAGCATGGTGTCTGTTACCTCTTCCCACTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR TCA 72 bp AGGGTCCCTAAGTGGATCAGTGTTGGCACCAGAATTTaGACCAACATAGACAGCTTTCACTGTTCTGCTCAC +
Preference number: 3 (lower is better)
Translates to: RVPKWISVGTRI*TNIDSFHCSAH
Trigger: GTGAGCAGAACAGTGAAAGCTGTCTATGTTGGTTCAAATTCTGGTGCCAACACTGATCCACTTAGGGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR TCA 72 bp TTAATTGTGCCCAAGTCGGCGGCTCTGCCTTCTTGGTaGATGGCAACTTCATCTATTCTTCTGACATCACCA +
Preference number: 3 (lower is better)
Translates to: LIVPKSAALPSW*MATSSILLTSP
Trigger: TGGTGATGTCAGAAGAATAGATGAAGTTGCCATTCACCAAGAAGGCAGAGCCGCCGACTTGGGCACAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR CAA 90 bp TTGTGCCCAAGTCGGCGGCTCTGCCTTCTTGGTGAATGGCAACTTCATCTATTCATTTTATCTTGTGAGTaGATGGTGCTTGATTGCAGT +
Preference number: 3 (lower is better)
Translates to: LCPSRRLCLLGEWQLHLFILSCE*MVLDCS
Trigger: ACTGCAATCAAGCACCATCAACTCACAAGATAAAAT...GAATAGATGAAGTTGCCATTCACCAAGAAGGCAGAGCCGCCGACTTGGGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR TCA 72 bp AGTTGGTATCCAAACAGGAAGCTGATTTTCTCCTGGTaGAACACAAGCAAAACCTCTCCTCCACGTTACCAC +
Preference number: 3 (lower is better)
Translates to: SWYPNRKLIFSW*NTSKTSPPRYH
Trigger: GTGGTAACGTGGAGGAGAGGTTTTGCTTGTGTTTCACCAGGAGAAAATCAGCTTCCTGTTTGGATACCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR TCA 72 bp GGTGCTTACTGGTCTCTGAGTTCCCTCAGTATTTATTaGTCATTATCTCTACCATCTCGGAGAGGGGGATGT +
Preference number: 3 (lower is better)
Translates to: GAYWSLSSLSIY*SLSLPSRRGGC
Trigger: ACATCCCCCTCTCCGAGATGGTAGAGATAATGATCAATAAATACTGAGGGAACTCAGAGACCAGTAAGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR GCA 72 bp GAACATACAATTGGGTTTTACACTGAGACATTCTATTaGCCAGGGACGAGCAGGAGACAGATGACTTCCTCT +
Preference number: 3 (lower is better)
Translates to: EHTIGFYTETFY*PGTSRRQMTSS
Trigger: AGAGGAAGTCATCTGTCTCCTGCTCGTCCCTGGGCAATAGAATGTCTCAGTGTAAAACCCAATTGTATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR CAA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTGGCTCCAAAATACAGTaGGGAAATGTGGACATTATG +
Preference number: 3 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSGSKIQ*GNVDIM
Trigger: CATAATGTCCACATTTCCCAACTGTATTTTGGAGCC...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CAA 90 bp TGTCTCTTTGGAGCTGTTGGGTACACCTGCAGATTCAGTCAAAATATGGATGGACATACTCTCTGGAGTTaGTGTCACCTTTGTGTTCTC +
Preference number: 3 (lower is better)
Translates to: CLFGAVGYTCRFSQNMDGHTLWS*CHLCVL
Trigger: GAGAACACAAAGGTGACACAAACTCCAGAGAGTATG...TCCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR TCA 72 bp TTACCAGTAAGATGTTGTTCTGCAGGAGTAGTAGTCTaGTTTCAGATGCTATTGCCAGTCCTGCGTTGGCAA +
Preference number: 3 (lower is better)
Translates to: LPVRCCSAGVVV*FQMLLPVLRWQ
Trigger: TTGCCAACGCAGGACTGGCAATAGCATCTGAAATCAGACTACTACTCCTGCAGAACAACATCTTACTGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR GCA 72 bp CAGAATTTGAACCAACATAGACAGCTTTCACTGTTCTaGTCACACCATACTCATGTAGTAGACAGGAAGCCC +
Preference number: 3 (lower is better)
Translates to: QNLNQHRQLSLF*SHHTHVVDRKP
Trigger: GGGCTTCCTGTCTACTACATGAGTATGGTGTGAGCAGAACAGTGAAAGCTGTCTATGTTGGTTCAAATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR GCA 72 bp GGCAGTGAAACTACTCTGTGTATAACAGTGGAAACATaGCATGATCCACTTGCTCCAACAAGCAGAAAGTAC +
Preference number: 3 (lower is better)
Translates to: GSETTLCITVET*HDPLAPTSRKY
Trigger: GTACTTTCTGCTTGTTGGAGCAAGTGGATCATGGCATGTTTCCACTGTTATACACAGAGTAGTTTCACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR GCA 72 bp TTGCAGTGTTTCTGTCTCCGTGGAGGTGCTTTTCTTTaGATCTCCGACAGGTTCATTGTAGAACTTCAAATG +
Preference number: 3 (lower is better)
Translates to: LQCFCLRGGAFL*ISDRFIVELQM
Trigger: CATTTGAAGTTCTACAATGAACCTGTCGGAGATGCAAAGAAAAGCACCTCCACGGAGACAGAAACACTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR-3UTR CAA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTAAACTGTTTCCGGAATaGATGAAGTGTGACACACAT +
Preference number: 3 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSKLFPE*MKCDTH
Trigger: ATGTGTGTCACACTTCATCAATTCCGGAAACAGTTT...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 72 bp CTTCCCCACACATGTTACCAATCTGTGCGGGGCATCTaGTCAACCTCGATATTATTGCTATTATTCATTCAT +
Preference number: 3 (lower is better)
Translates to: LPHTCYQSVRGI*STSILLLLFIH
Trigger: ATGAATGAATAATAGCAATAATATCGAGGTTGACCAGATGCCCCGCACAGATTGGTAACATGTGTGGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR-3UTR CAA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACAACCTCGGAAGCTTTCTaGAAGGTGATGGGAGTTCAC +
Preference number: 3 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTTSEAF*KVMGVH
Trigger: GTGAACTCCCATCACCTTCAAGAAAGCTTCCGAGGT...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CAA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCGCCCTAAACATATGGTaGTGTTGGTTTTCATATAAG +
Preference number: 3 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGALNIW*CWFSYK
Trigger: CTTATATGAAAACCAACACAACCATATGTTTAGGGC...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR TCA 72 bp TCTATTCTTCTGACATCACCATTTTATCTTGTGAGTTaGTGGTGCTTGATTGCAGTGTTTCTGTCTCCGTGG +
Preference number: 3 (lower is better)
Translates to: SILLTSPFYLVS*WCLIAVFLSPW
Trigger: CCACGGAGACAGAAACACTGCAATCAAGCACCATCAACTCACAAGATAAAATGGTGATGTCAGAAGAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR GCA 72 bp GCCTGCACAGATATTTATAACAGCTTTCCTCATAATTaGCAAAAGGAAGCATCCAACAGTCCTTCAGTAGGT +
Preference number: 3 (lower is better)
Translates to: ACTDIYNSFPHN*QKEASNSPSVG
Trigger: ACCTACTGAAGGACTGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGCAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR GCA 72 bp ATCACCATTTTATCTTGTGAGTTGATGGTGCTTGATTaGAGTGTTTCTGTCTCCGTGGAGGTGCTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: ITILSCELMVLD*SVSVSVEVLFF
Trigger: AAAGAAAAGCACCTCCACGGAGACAGAAACACTGCAATCAAGCACCATCAACTCACAAGATAAAATGGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR CCA 72 bp AGAAAGAAGGGGACAGAAGAGGCTCCAAAATACAGTTaGGAAATGTGGACATTATGGTTCATTGTAAGTCAC +
Preference number: 3 (lower is better)
Translates to: RKKGTEEAPKYS*EMWTLWFIVSH
Trigger: GTGACTTACAATGAACCATAATGTCCACATTTCCCAACTGTATTTTGGAGCCTCTTCTGTCCCCTTCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 72 bp AGAGGAATGCTGATAATGTGGGAGGCTATGCATATGTaGATTAGGGGATATATGGGAAACCTCTGTAATTTC +
Preference number: 3 (lower is better)
Translates to: RGMLIMWEAMHM*IRGYMGNLCNF
Trigger: GAAATTACAGAGGTTTCCCATATATCCCCTAATCCACATATGCATAGCCTCCCACATTATCAGCATTCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CAA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATAGAAACCATTGTATaGCAGGGGGCACACCACTGT +
Preference number: 3 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVIETIV*QGAHHC
Trigger: ACAGTGGTGTGCCCCCTGCAATACAATGGTTTCTAT...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CAA 90 bp TACTTATTTCTGCATAGACACGGTAACAGTCTGATCTCTCTTTTCCCATTTCCCGAATACGGTGCACCATaGATACAATCATCAAAGCTG +
Preference number: 3 (lower is better)
Translates to: YLFLHRHGNSLISLFPFPEYGAP*IQSSKL
Trigger: CAGCTTTGATGATTGTATCAATGGTGCACCGTATTC...GGGAAATGGGAAAAGAGAGATCAGACTGTTACCGTGTCTATGCAGAAATAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR TCA 72 bp AACTTCAAATGTCTAGTTGGTATCCAAACAGGAAGCTaGTTTTCTCCTGGTGAAACACAAGCAAAACCTCTC +
Preference number: 3 (lower is better)
Translates to: NFKCLVGIQTGS*FSPGETQAKPL
Trigger: GAGAGGTTTTGCTTGTGTTTCACCAGGAGAAAATCAGCTTCCTGTTTGGATACCAACTAGACATTTGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR CCA 72 bp TGTGGGAGGCTATGCATATGTGGATTAGGGGATATATaGGAAACCTCTGTAATTTCTACCCAATTTTGCTTT +
Preference number: 3 (lower is better)
Translates to: CGRLCICGLGDI*ETSVISTQFCF
Trigger: AAAGCAAAATTGGGTAGAAATTACAGAGGTTTCCCATATATCCCCTAATCCACATATGCATAGCCTCCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 72 bp ACACACACACACAAGGACTCCACTTATACAATATTATaGAAAAGGCAGAACTATAGAGACGGAAACAGACTG +
Preference number: 3 (lower is better)
Translates to: THTHKDSTYTIL*KRQNYRDGNRL
Trigger: CAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGTGGAGTCCTTGTGTGTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CAA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGGGCTCCAAAATACAGTaGGGAAATGTGGACATTATG +
Preference number: 3 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVGSKIQ*GNVDIM
Trigger: CATAATGTCCACATTTCCCAACTGTATTTTGGAGCC...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR-3UTR CAA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGTGTTGGCACCAGAATTaGAACCAACATAGACAGCTT +
Preference number: 3 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVCWHQN*NQHRQL
Trigger: AAGCTGTCTATGTTGGTTCAAATTCTGGTGCCAACA...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR TCA 72 bp GGCCTGTTCTTCATCTTGATTGTGGTGTTGATTGCATaGTTAGATACAACTGTCAAAACTCAGAACTCTACA +
Preference number: 3 (lower is better)
Translates to: GLFFILIVVLIA*LDTTVKTQNST
Trigger: TGTAGAGTTCTGAGTTTTGACAGTTGTATCTAATCATGCAATCAACACCACAATCAAGATGAAGAACAGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR GCA 72 bp CATAGTGGACAGACCGTTTTACAATCCTACAAGCAATaGATGAAAATTTCCATTGGTCTGTATTCTTGCCAA +
Preference number: 3 (lower is better)
Translates to: HSGQTVLQSYKQ*MKISIGLYSCQ
Trigger: TTGGCAAGAATACAGACCAATGGAAATTTTCATGCATTGCTTGTAGGATTGTAAAACGGTCTGTCCACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CCA 72 bp AACAAATATACTACTCTGAGAGGAATGCTGATAATGTaGGAGGCTATGCATATGTGGATTAGGGGATATATG +
Preference number: 3 (lower is better)
Translates to: NKYTTLRGMLIM*EAMHMWIRGYM
Trigger: CATATATCCCCTAATCCACATATGCATAGCCTCCCACATTATCAGCATTCCTCTCAGAGTAGTATATTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR TCA 72 bp GTGGACAGACCGTTTTACAATCCTACAAGCAATGCATaGAAATTTCCATTGGTCTGTATTCTTGCCAATTTA +
Preference number: 3 (lower is better)
Translates to: VDRPFYNPTSNA*KFPLVCILANL
Trigger: TAAATTGGCAAGAATACAGACCAATGGAAATTTTCATGCATTGCTTGTAGGATTGTAAAACGGTCTGTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR TCA 72 bp AATTTTAGTTTTGACTTTGGCTTTGGAGTGGGTTGCTaGGAACATAGCAGTTGTTTCACTAATCCCAGTAAA +
Preference number: 3 (lower is better)
Translates to: NFSFDFGFGVGC*EHSSCFTNPSK
Trigger: TTTACTGGGATTAGTGAAACAACTGCTATGTTCTCAGCAACCCACTCCAAAGCCAAAGTCAAAACTAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588354.1
3UTR TCA 72 bp GTTGTAGTAAGTGTCAATAAATCATTTCTTTATGTCTaGGCAGCCCTCCATAGTATTGGTGTACACAATTTG +
Preference number: 3 (lower is better)
Translates to: VVVSVNKSFLYV*AALHSIGVHNL
Trigger: CAAATTGTGTACACCAATACTATGGAGGGCTGCTCAGACATAAAGAAATGATTTATTGACACTTACTACAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR TCA 72 bp AACCATATGGATGAATCTCAGATACATCACATTAAATaGAAGCACTCCGACTCAAAAGGAGATATACATACA +
Preference number: 3 (lower is better)
Translates to: NHMDESQIHHIK*KHSDSKGDIHT
Trigger: TGTATGTATATCTCCTTTTGAGTCGGAGTGCTTTCATTTAATGTGATGTATCTGAGATTCATCCATATGGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAATGGGAGTGGCCCCCTaGCTATGGATCCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKMGVAP*LWIPHS
Trigger: GGAGTGGGGGATCCATAGGCAGGGGGCCACTCCCAT...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp GGGTACACCTGCAGATTCAGTCAAAATATGGATGGATGGCGAGGCCTCCCACTGGGCCCAGGGGACCGGTaGTTACTGGTCTCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: GYTCRFSQNMDGWRGLPLGPGDR*LLVSEF
Trigger: GAACTCAGAGACCAGTAAGCACCGGTCCCCTGGGCC...CAGTGGGAGGCCTCGCCATCCATCCATATTTTGACTGAATCTGCAGGTGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CCA 90 bp GGGTACACCTGCAGATTCAGTCAAAATATGGATGGATGGCGAGGCCTCCCACTGTGGGGGATGTCGGGCTaGGGGACAGTCAGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: GYTCRFSQNMDGWRGLPLWGMSG*GTVRSY
Trigger: GTAAGACCTGACTGTCCCCCAGCCCGACATCCCCCA...CAGTGGGAGGCCTCGCCATCCATCCATATTTTGACTGAATCTGCAGGTGTACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CCA 90 bp ATGGCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTTGGGTACACCTGCAGAGGCAGAGGTCCCTGTaGCCTTCCACAGTGTATTGT +
Preference number: 4 (lower is better)
Translates to: MARSRWSLSLWSCWVHLQRQRSL*PSTVYC
Trigger: ACAATACACTGTGGAAGGCCACAGGGACCTCTGCCT...CTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR TCA 90 bp CGTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTTGGGTACATACCCTGGCTTCTTCTaGGCGCACAAGTTTACCGCA +
Preference number: 4 (lower is better)
Translates to: RHHGPFSMVAVSLELLGTYPGFF*AHKFTA
Trigger: TGCGGTAAACTTGTGCGCTCAGAAGAAGCCAGGGTA...TGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATGTCATTGGGCCCTGCTaGCTTGGATCCCATCCATCA +
Preference number: 4 (lower is better)
Translates to: RIESARLDADGSGPLPMDVIGPC*LGSHPS
Trigger: TGATGGATGGGATCCAAGCCAGCAGGGCCCAATGAC...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp TGTCTCTTTGGAGCTGTTGGGTACACCTGCAGATTCAGTCAAAATATGGATGGATTTCGGGTGTCGGGCTaGGGGATGTCGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: CLFGAVGYTCRFSQNMDGFRVSG*GMSGWG
Trigger: CCCCCAGCCCGACATCCCCCAGCCCGACACCCGAAA...TCCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR TCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATAGTTTGGTACTGCCCTaGCATGGAGTTAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RIESARLDADGSGPLPMDSLVLP*HGVRAG
Trigger: CCCAGCTCTAACTCCATGTCAGGGCAGTACCAAACT...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR TCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATACCTTGGCTTTAAGCTaGCTTTGGCCACGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: RIESARLDADGSGPLPMDTLALS*LWPRGQ
Trigger: TTGACCCCGTGGCCAAAGTCAGCTTAAAGCCAAGGT...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATCACGGGGTCAATGTCTaGCACACTGCATCACATCCA +
Preference number: 4 (lower is better)
Translates to: RIESARLDADGSGPLPMDHGVNV*HTASHP
Trigger: TGGATGTGATGCAGTGTGGCAGACATTGACCCCGTG...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTGAGCTGGCACCGTGCTaGGCGCCTGGTATACAGCAG +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSELAPC*APGIQQ
Trigger: CTGCTGTATACCAGGCGCCCAGCACGGTGCCAGCTC...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp CGTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTTGGGTACACATGGGGAGAAATCTTaGGCAATACCTGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RHHGPFSMVAVSLELLGTHGEKS*AIPGFP
Trigger: GGGAAAGCCAGGTATTGCCCAAGATTTCTCCCCATG...TGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR CAA 72 bp TCACACCATACTCATGTAGTAGACAGGAAGCCCAGCTaGTGGTCTCCTGAGATCTCCAGATCATCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SHHTHVVDRKPS*WSPEISRSSLA
Trigger: GGCCAGGGATGATCTGGAGATCTCAGGAGACCACAAGCTGGGCTTCCTGTCTACTACATGAGTATGGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CAA 72 bp GGAAGTGTCCATGACAACCTTGGCTTTAAGCTGACTTaGGCCACGGGGTCAATGTCTGCCACACTGCATCAC +
Preference number: 4 (lower is better)
Translates to: GSVHDNLGFKLT*ATGSMSATLHH
Trigger: GTGATGCAGTGTGGCAGACATTGACCCCGTGGCCAAAGTCAGCTTAAAGCCAAGGTTGTCATGGACACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CAA 72 bp CGTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTaGGAGCTGTTGGGTACACCTGCAGATTCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: RHHGPFSMVAVS*ELLGTPADSVK
Trigger: TTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR TCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAACAGCTTGTGGTCTCCTaGGATCTCCAGATCATCCCT +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKQLVVS*DLQIIP
Trigger: AGGGATGATCTGGAGATCTCAGGAGACCACAAGCTG...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TGGAGTAGAGTGTGGTGGGGAGGTGTAGGATATACCATAAATAGTCACACTGGGGGTTTCTGGGCAGGCTaGGGGTCCCTAAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: WSRVWWGGVGYTINSHTGGFWAG*GSLSGS
Trigger: TGATCCACTTAGGGACCCTCAGCCTGCCCAGAAACC...CCCAGTGTGACTATTTATGGTATATCCTACACCTCCCCACCACACTCTACTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR TCA 90 bp ATGGCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTTGGGTACACCTGCAGGACACGGTAACAGTCTaGTCTCTCTTTTCCCATTTC +
Preference number: 4 (lower is better)
Translates to: MARSRWSLSLWSCWVHLQDTVTV*SLFSHF
Trigger: GAAATGGGAAAAGAGAGATCAGACTGTTACCGTGTC...CTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR GCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAACATTATCCAACAAGGTaGCTGAGCCCCAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKHYPTR*LSPRTL
Trigger: GAGGGTTCTGGGGCTCAGGCACCTTGTTGGATAATG...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAAGGCTGATGGTCCAGTaGGGAAGAGGGATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKRLMVQ*GRGMRN
Trigger: GTTTCTCATCCCTCTTCCCCACTGGACCATCAGCCT...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTGCTGTCATTGGGCCCTaGTGGCTTGGATCCCATCCA +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSAVIGP*WLGSHP
Trigger: TGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGC...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCCTTGTACTGAGCATCTaGTTTGAGCTGGCACCGTGC +
Preference number: 4 (lower is better)
Translates to: LILTGCCHWALLAWIPSILVLSI*FELAPC
Trigger: GCACGGTGCCAGCTCAAAGCAGATGCTCAGTACAAG...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTCCCCTCTATGTGACCTaGCACTGTGACCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSPLYVT*HCDQEE
Trigger: CTCCTCCTGGTCACAGTGGCAGGTCACATAGAGGGG...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp AGAAATCTTGGGCAATACCTGGCTTTCCCAGGCAGAGGTCCCTGTGGCCTTCCAAAGGTTAAGAAAAGGTaGTGTGCCTTGATGTGCACG +
Preference number: 4 (lower is better)
Translates to: RNLGQYLAFPGRGPCGLPKVKKR*CALMCT
Trigger: CGTGCACATCAAGGCACAGCACCTTTTCTTAACCTT...TGGAAGGCCACAGGGACCTCTGCCTGGGAAAGCCAGGTATTGCCCAAGATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAACACAAGACACGGTGCTaGGGGTCAAAACACAAAGTG +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKHKTRC*GSKHKV
Trigger: CACTTTGTGTTTTGACCCCCAGCACCGTGTCTTGTG...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATGTAAAACAGGAAAAATaGCCAGGCGTCATGGCCCTT +
Preference number: 4 (lower is better)
Translates to: RIESARLDADGSGPLPMDVKQEK*PGVMAL
Trigger: AAGGGCCATGACGCCTGGCCATTTTTCCTGTTTTAC...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCGTGATTGCCAAGGGCTaGGAGTGGGAAAAGGGACTA +
Preference number: 4 (lower is better)
Translates to: LILTGCCHWALLAWIPSIVIAKG*EWEKGL
Trigger: TAGTCCCTTTTCCCACTCCCAGCCCTTGGCAATCAC...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCGGGTGTGCTGGACCATaGTGGGAGGAGGCATTAAAT +
Preference number: 4 (lower is better)
Translates to: LILTGCCHWALLAWIPSIGCAGP*WEEALN
Trigger: ATTTAATGCCTCCTCCCACCATGGTCCAGCACACCC...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp ATGGCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTTGGGTACACCTGCAGAAGCAGCATACTCTCTaGAGTTTGTGTCACCTTTGT +
Preference number: 4 (lower is better)
Translates to: MARSRWSLSLWSCWVHLQKQHTL*SLCHLC
Trigger: ACAAAGGTGACACAAACTCCAGAGAGTATGCTGCTT...CTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
3UTR CAA 72 bp GGCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTaGGGTACACCTGCAGATTCAGTCAAAATATGGATG +
Preference number: 4 (lower is better)
Translates to: GPFSMVAVSLEL*GTPADSVKIWM
Trigger: CATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR TCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAAACTTGATATCCTACTaGGAGCAGGTGGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKNLISY*EQVAVG
Trigger: ACCTACAGCCACCTGCTCTCAGTAGGATATCAAGTT...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAGCAAGTCTTGGTAGATaGCAGTGGGGACTCAACATA +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKASLGR*QWGLNI
Trigger: TATGTTGAGTCCCCACTGTCATCTACCAAGACTTGC...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAGACACCATGCTGGAGTaGGGTGATTGTAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKDTMLE*GDCKRG
Trigger: ACCTCTTTTACAATCACCTCACTCCAGCATGGTGTC...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCCAGCATCCACCGTATTaGGGGCATTCCCACATGCTG +
Preference number: 4 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGQHPPY*GHSHML
Trigger: CAGCATGTGGGAATGCCCTCAATACGGTGGATGCTG...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAAATTGTTTCCCTTCATaGGGCTTGGGCATACAGAGG +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKNCFPS*GLGIQR
Trigger: CCTCTGTATGCCCAAGCCTCATGAAGGGAAACAATT...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGACTGAGCATCTGCTTTaGGCTGGCACCGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTTEHLL*AGTVLG
Trigger: GCCCAGCACGGTGCCAGCTCAAAGCAGATGCTCAGT...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp GAATCAGCAGACATTGGGTTAACGGGACAATGGGGAGCCAAGAGATACCATCAAAAACAGACTGGTGATTaGCAAGGGCTGGGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: ESADIGLTGQWGAKRYHQKQTGD*QGLGVG
Trigger: TCCCACTCCCAGCCCTTGGCAATCACCAGTCTGTTT...TTGATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCCAATGTCTGCTGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp AGAAATCTTGGGCAATACCTGGCTTTCCCAGGCAGAGGTCCCTGTGGCCTTCCATCCTCTTATCTGAACTaGAAAGAGGCCTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RNLGQYLAFPGRGPCGLPSSYLN*KEAFLF
Trigger: AAAGAGGAAGGCCTCTTTGCAGTTCAGATAAGAGGA...TGGAAGGCCACAGGGACCTCTGCCTGGGAAAGCCAGGTATTGCCCAAGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTATCCCTGGCCCACCCTaGGTCCATCATTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSIPGPP*VHHSIV
Trigger: CACAATGGAATGATGGACCCAGGGTGGGCCAGGGAT...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp TGGAGTAGAGTGTGGTGGGGAGGTGTAGGATATACCATAAATAGTCACACTGGGAGGAAGCCCAGCTTGTaGTCTCCTGAGATCTCCAGA +
Preference number: 4 (lower is better)
Translates to: WSRVWWGGVGYTINSHTGRKPSL*SPEISR
Trigger: TCTGGAGATCTCAGGAGACCACAAGCTGGGCTTCCT...CCCAGTGTGACTATTTATGGTATATCCTACACCTCCCCACCACACTCTACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATGGAATGCTGATAATGTaGGAGGCTATGCATATGTGG +
Preference number: 4 (lower is better)
Translates to: RIESARLDADGSGPLPMDGMLIM*EAMHMW
Trigger: CCACATATGCATAGCCTCCCACATTATCAGCATTCC...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAATGTGCTGGACCATGGTaGGAGGAGGCATTAAATCTT +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKCAGPW*EEALNL
Trigger: AAGATTTAATGCCTCCTCCCACCATGGTCCAGCACA...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp ACCAGTAAGATGTTGTTCTGCAGGAGTAGTAGTCTGATTTCAGATGCTATTGCCCACAAGACACGGTGCTaGGCAGCTCTGACGTGGCCT +
Preference number: 4 (lower is better)
Translates to: TSKMLFCRSSSLISDAIAHKTRC*AALTWP
Trigger: AGGCCACGTCAGAGCTGCCCAGCACCGTGTCTTGTG...GGCAATAGCATCTGAAATCAGACTACTACTCCTGCAGAACAACATCTTACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR TCA 90 bp TGGAGTAGAGTGTGGTGGGGAGGTGTAGGATATACCATAAATAGTCACACTGGGTACAGTAGCCAAGGGTaGCTAAGGAACCGCATGAAG +
Preference number: 4 (lower is better)
Translates to: WSRVWWGGVGYTINSHTGYSSQG*LRNRMK
Trigger: CTTCATGCGGTTCCTTAGTCACCCTTGGCTACTGTA...CCCAGTGTGACTATTTATGGTATATCCTACACCTCCCCACCACACTCTACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR TCA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCAGAGGAAAAGGTCTATaGGGCTGGGACCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGRGKGL*GWDLIL
Trigger: GAGGATGAGGTCCCAGCCTCATAGACCTTTTCCTCT...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCGGTTTCTGGGCAGGCTaGGGGTCCCTAAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLGFWAG*GSLSGS
Trigger: TGATCCACTTAGGGACCCTCAGCCTGCCCAGAAACC...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTGAGGAGATGAAGGGATaGCAGGCAGAACACAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSEEMKG*QAEHRG
Trigger: TCCTCTGTGTTCTGCCTGTCATCCCTTCATCTCCTC...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAGGAGGCATTAAATCTTaGATTAGAGGACCCAAACCC +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKGGIKS*IRGPKP
Trigger: GGGTTTGGGTCCTCTAATTCAAGATTTAATGCCTCC...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR TCA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCCTTTCCCCCTCTATGTaGCCTGCCACTGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLLSPSM*PATVTR
Trigger: CCTGGTCACAGTGGCAGGTCACATAGAGGGGGAAAG...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATTGGATCCCCCACTCCTaGCCCTTTCCCCCTCTATGT +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYWIPHS*PFPPLC
Trigger: ACATAGAGGGGGAAAGGGGCAGGAGTGGGGGATCCA...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp TTGTGCCCAAGTCGGCGGCTCTGCCTTCTTGGTGAATGGCAACTTCATCTATTCTTGATGGTGCTTGATTaGAGTGTTTCTGTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LCPSRRLCLLGEWQLHLFLMVLD*SVSVSV
Trigger: CACGGAGACAGAAACACTGCAATCAAGCACCATCAA...GAATAGATGAAGTTGCCATTCACCAAGAAGGCAGAGCCGCCGACTTGGGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CCA 90 bp GAATCAGCAGACATTGGGTTAACGGGACAATGGGGAGCCAAGAGATACCATCAAGGGTTAACGGGACAATaGGGAGCCAAGAGATACCAT +
Preference number: 4 (lower is better)
Translates to: ESADIGLTGQWGAKRYHQGLTGQ*GAKRYH
Trigger: ATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCC...TTGATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCCAATGTCTGCTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCAATGGCAGGATAAGATaGGGATGGAGGCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: LILTGCCHWALLAWIPSINGRIR*GWRHCK
Trigger: TTTGCAGTGCCTCCATCCCCATCTTATCCTGCCATT...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp TTGTGCCCAAGTCGGCGGCTCTGCCTTCTTGGTGAATGGCAACTTCATCTATTCTCTCAGGCTATCACATaGGGAGAAATCTTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: LCPSRRLCLLGEWQLHLFSQAIT*GEILGN
Trigger: ATTGCCCAAGATTTCTCCCCATGTGATAGCCTGAGA...GAATAGATGAAGTTGCCATTCACCAAGAAGGCAGAGCCGCCGACTTGGGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR TCA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCCAAAACACAAAGTGCTaGGGGCCCGTGAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLQNTKC*GPVRLR
Trigger: TCTCAGCCTCACGGGCCCTCAGCACTTTGTGTTTTG...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATTTAGATACTGCTAGGTaGGTAACGGGAGATAATTGT +
Preference number: 4 (lower is better)
Translates to: RIESARLDADGSGPLPMDLDTAR*VTGDNC
Trigger: ACAATTATCTCCCGTTACTCACCTAGCAGTATCTAA...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR TCA 90 bp GAATCAGCAGACATTGGGTTAACGGGACAATGGGGAGCCAAGAGATACCATCAAAGTGGAAACATGCCATaGTCCACTTGCTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: ESADIGLTGQWGAKRYHQSGNMP*STCSNK
Trigger: CTTGTTGGAGCAAGTGGATCATGGCATGTTTCCACT...TTGATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCCAATGTCTGCTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATACGGAAACAGACTGGTaGTTGCCAAGGGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYTETDW*LPRAGS
Trigger: ACTCCCAGCCCTTGGCAATCACCAGTCTGTTTCCGT...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATGAGGTGGGCAAATCGTaGGGTCAGGAGATTGAGACC +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYEVGKS*GQEIET
Trigger: GGTCTCAATCTCCTGACCTCACGATTTGCCCACCTC...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR TCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTCGGTATGGTACGGTATaGGGAATGTGGAGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSRYGTV*GMWSRV
Trigger: CACTCTACTCCACATTCCTCATACCGTACCATACCG...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR TCA 90 bp TTGTGCCCAAGTCGGCGGCTCTGCCTTCTTGGTGAATGGCAACTTCATCTATTCATCCAAACAGGAAGCTaGTTTTCTCCTGGTGAAACA +
Preference number: 4 (lower is better)
Translates to: LCPSRRLCLLGEWQLHLFIQTGS*FSPGET
Trigger: TGTTTCACCAGGAGAAAATCAGCTTCCTGTTTGGAT...GAATAGATGAAGTTGCCATTCACCAAGAAGGCAGAGCCGCCGACTTGGGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR GCA 90 bp TGGAGTAGAGTGTGGTGGGGAGGTGTAGGATATACCATAAATAGTCACACTGGGGTTCACAAGACACGGTaGTGGGGGTCAAAACACAAA +
Preference number: 4 (lower is better)
Translates to: WSRVWWGGVGYTINSHTGVHKTR*WGSKHK
Trigger: TTTGTGTTTTGACCCCCAGCACCGTGTCTTGTGAAC...CCCAGTGTGACTATTTATGGTATATCCTACACCTCCCCACCACACTCTACTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAACAATGTCTGCCACACTaGATCACATCCATTATCCAA +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKQCLPH*ITSIIQ
Trigger: TTGGATAATGGATGTGATGCAGTGTGGCAGACATTG...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATCCAAGATCACACCACTaGACTCCAGCCTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYPRSHH*TPAWQQ
Trigger: CTGTTGCCAGGCTGGAGTGCAGTGGTGTGATCTTGG...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp AGAAATCTTGGGCAATACCTGGCTTTCCCAGGCAGAGGTCCCTGTGGCCTTCCAAGTAAGATGTTGTTCTaGAGGAGTAGTAGTCTGATT +
Preference number: 4 (lower is better)
Translates to: RNLGQYLAFPGRGPCGLPSKMLF*RSSSLI
Trigger: AATCAGACTACTACTCCTGCAGAACAACATCTTACT...TGGAAGGCCACAGGGACCTCTGCCTGGGAAAGCCAGGTATTGCCCAAGATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTCACAAGACACGGTGCTaGGGGTCAAAACACAAAGTG +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSHKTRC*GSKHKV
Trigger: CACTTTGTGTTTTGACCCCCAGCACCGTGTCTTGTG...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCACAGGATGCTGTCATTaGGCCCTGCTGGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLTGCCH*ALLAWI
Trigger: GATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGT...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATACAGGATGCTGTCATTaGGCCCTGCTGGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYTGCCH*ALLAWI
Trigger: GATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGT...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTGAGGCACTGCAAAGGTaGAAGAGGAAAGCAAGATGC +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSEALQR*KRKARC
Trigger: GCATCTTGCTTTCCTCTTCCACCTTTGCAGTGCCTC...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGGCATCTGCTTTGAGCTaGCACCGTGCTGGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVASALS*HRAGRL
Trigger: CAGGCGCCCAGCACGGTGCCAGCTCAAAGCAGATGC...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp GAATCAGCAGACATTGGGTTAACGGGACAATGGGGAGCCAAGAGATACCATCAAGGGTGTGATTCATCCTaGCATTATGGGAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ESADIGLTGQWGAKRYHQGCDSS*HYGKCP
Trigger: TGGACACTTCCCATAATGCCAGGATGAATCACACCC...TTGATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCCAATGTCTGCTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTTGGAGTAGAGTGTGGTaGGGAGGTGTAGGATATACC +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSWSRVW*GGVGYT
Trigger: GGTATATCCTACACCTCCCCACCACACTCTACTCCA...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp GAATCAGCAGACATTGGGTTAACGGGACAATGGGGAGCCAAGAGATACCATCAAATGTGGAGTAGAGTGTaGTGGGGAGGTGTAGGATAT +
Preference number: 4 (lower is better)
Translates to: ESADIGLTGQWGAKRYHQMWSRV*WGGVGY
Trigger: ATATCCTACACCTCCCCACCACACTCTACTCCACAT...TTGATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCCAATGTCTGCTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR TCA 90 bp CATCAAAGCTGCAAGCAGCATACTCTCTGGAGTTTGTGTCACCTTTGTGTTCTCAACTTGATATCCTACTaGGAGCAGGTGGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: HQSCKQHTLWSLCHLCVLNLISY*EQVAVG
Trigger: ACCTACAGCCACCTGCTCTCAGTAGGATATCAAGTT...GAGAACACAAAGGTGACACAAACTCCAGAGAGTATGCTGCTTGCAGCTTTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR TCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAATGTATATTGAGGTGTaGCTTCTGAGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKMYIEV*LLSEGF
Trigger: AAAGCCTTCACTCAGAAGTCACACCTCAATATACAT...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCGACACCATGCTGGAGTaGGGTGATTGTAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGDTMLE*GDCKRG
Trigger: ACCTCTTTTACAATCACCTCACTCCAGCATGGTGTC...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATGTCACCGCCATTGCCTaGGGGGAAGGAAGAAAGTTA +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYVTAIA*GEGRKL
Trigger: TAACTTTCTTCCTTCCCCTCAGGCAATGGCGGTGAC...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGGTGAGGTCAGGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTVRSGD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCCTGACCTCAC...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR TCA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCACCGATCACCATAACTaGCCCTACAGGCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLTDHHN*PYRLCH
Trigger: GTGACAGAGCCTGTAGGGTCAGTTATGGTGATCGGT...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392157.2
CDS-3UTR GCA 90 bp GAATCAGCAGACATTGGGTTAACGGGACAATGGGGAGCCAAGAGATACCATCAACTAATATTAACAGGATaGTGTCATTGGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ESADIGLTGQWGAKRYHQLILTG*CHWALL
Trigger: CAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG...TTGATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCCAATGTCTGCTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCCATTCCATTGTGCCTTaGGGGGAACTCAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGHSIVP*GELRGK
Trigger: TTTTCCTCTGAGTTCCCCCCAAGGCACAATGGAATG...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTCATTCCATTGTGCCTTaGGGGGAACTCAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSHSIVP*GELRGK
Trigger: TTTTCCTCTGAGTTCCCCCCAAGGCACAATGGAATG...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATAGGAAGCCCAGCTTGTaGTCTCCTGAGATCTCCAGA +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYRKPSL*SPEISR
Trigger: TCTGGAGATCTCAGGAGACCACAAGCTGGGCTTCCT...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCTTCTATATTTTCCAGTaGCTGCTCCAGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGFYIFQ*LLQWRR
Trigger: CCTCCTCCACTGGAGCAGCCACTGGAAAATATAGAA...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATGTAATCCCAATGCTTTaGGTGGCCGAGGTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYVIPML*VAEVGK
Trigger: TTTGCCCACCTCGGCCACCCAAAGCATTGGGATTAC...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
3UTR CAA 72 bp CCAGATGACCATAAAATTCTTACCTCGGAAGCTTTCTaGAAGGTGATGGGAGTTCACAAGACACGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PDDHKILTSEAF*KVMGVHKTRCW
Trigger: CCAGCACCGTGTCTTGTGAACTCCCATCACCTTCAAGAAAGCTTCCGAGGTAAGAATTTTATGGTCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATAATGGGTCTTCTGGATaGAGGCCTGTCCGCATTCAA +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYNGSSG*RPVRIQ
Trigger: TTGAATGCGGACAGGCCTTCATCCAGAAGACCCATT...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAATGGGTCTTCTGGATaGAGGCCTGTCCGCATTCAA +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTNGSSG*RPVRIQ
Trigger: TTGAATGCGGACAGGCCTTCATCCAGAAGACCCATT...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292841.10
ENST00000356958.8
ENST00000392157.2
CDS-3UTR TCA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCATCTTCCAGGGATCATaGCCATGCAAACATGGAGAT +
Preference number: 4 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGIFQGS*PCKHGD
Trigger: ATCTCCATGTTTGCATGGTCATGATCCCTGGAAGAT...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGACGGAAACAGACTGGTaGTTGCCAAGGGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGTETDW*LPRAGS
Trigger: ACTCCCAGCCCTTGGCAATCACCAGTCTGTTTCCGT...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATAGAGCTTTTCTCCTaGAAGAACTTTCAGGTGTAC +
Preference number: 4 (lower is better)
Translates to: LILTGCCHWALLAWIPSIIELFS*KNFQVY
Trigger: GTACACCTGAAAGTTCTTGCAGGAGAAAAGCTCTAT...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGGCTGTCATTGGGCCCTaGTGGCTTGGATCCCATCCA +
Preference number: 4 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVAVIGP*WLGSHP
Trigger: TGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGC...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp GAATCAGCAGACATTGGGTTAACGGGACAATGGGGAGCCAAGAGATACCATCAAATAACAGTGGAAACATaGCATGATCCACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ESADIGLTGQWGAKRYHQITVET*HDPLAP
Trigger: TGGAGCAAGTGGATCATGGCATGTTTCCACTGTTAT...TTGATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCCAATGTCTGCTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTGGTCATCACACAGAATaGAGAGTGGACCTTACTAGA +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSGHHTE*RVDLTR
Trigger: TCTAGTAAGGTCCACTCTCCATTCTGTGTGATGACC...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATGGGTTAACGGGACAATaGGGAGCCAAGAGATACCAT +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYGLTGQ*GAKRYH
Trigger: ATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCC...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGGGAATCAGCAGACATTaGGTTAACGGGACAATGGGG +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTGISRH*VNGTMG
Trigger: CCCCATTGTCCCGTTAACCCAATGTCTGCTGATTCC...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGATCCCTGGCCCACCCTaGGTCCATCATTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGIPGPP*VHHSIV
Trigger: CACAATGGAATGATGGACCCAGGGTGGGCCAGGGAT...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGGTCATTGGGCCCTGCTaGCTTGGATCCCATCCATCA +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGVIGPC*LGSHPS
Trigger: TGATGGATGGGATCCAAGCCAGCAGGGCCCAATGAC...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTTTCATCCTGGCATTATaGGAAGTGTCCATGACAACC +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSFILAL*EVSMTT
Trigger: GGTTGTCATGGACACTTCCCATAATGCCAGGATGAA...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp GGAGTCTCTTATGTCTACTTATTTCTGCATAGACACGGTAACAGTCTGATCTCTTGGTCGCTGTCTCTTTaGAGCTGTTGGGTACACCTG +
Preference number: 4 (lower is better)
Translates to: GVSYVYLFLHRHGNSLISWSLSL*SCWVHL
Trigger: CAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCA...AGAGATCAGACTGTTACCGTGTCTATGCAGAAATAAGTAGACATAAGAGACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CCA 90 bp GCTTTTCTTTGCATCTCCGACAGGTTCATTGTAGAACTTCAAATGTCTAGTTGGATCTTGGGCAATACCTaGCTTTCCCAGGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: AFLCISDRFIVELQMSSWILGNT*LSQAEV
Trigger: GACCTCTGCCTGGGAAAGCCAGGTATTGCCCAAGAT...CCAACTAGACATTTGAAGTTCTACAATGAACCTGTCGGAGATGCAAAGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR TCA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCAACTTGATATCCTACTaGGAGCAGGTGGCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLNLISY*EQVAVG
Trigger: ACCTACAGCCACCTGCTCTCAGTAGGATATCAAGTT...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292841.10
ENST00000356958.8
ENST00000392157.2
CDS-3UTR TCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGGAATTCTCTGATGCCTaGAGAGGGACGACACTTGAA +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTEFSDA*RGTTLE
Trigger: TTCAAGTGTCGTCCCTCTTCAGGCATCAGAGAATTC...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292841.10
ENST00000356958.8
ENST00000392157.2
CDS-3UTR TCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACACAAAACACAAAGTGCTaGGGGCCCGTGAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTQNTKC*GPVRLR
Trigger: TCTCAGCCTCACGGGCCCTCAGCACTTTGTGTTTTG...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGCAGCATCCACCGTATTaGGGGCATTCCCACATGCTG +
Preference number: 4 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVQHPPY*GHSHML
Trigger: CAGCATGTGGGAATGCCCTCAATACGGTGGATGCTG...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGAGAGGAAAAGGTCTATaGGGCTGGGACCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGRGKGL*GWDLIL
Trigger: GAGGATGAGGTCCCAGCCTCATAGACCTTTTCCTCT...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAATTGTTTCCCTTCATaGGGCTTGGGCATACAGAGG +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTNCFPS*GLGIQR
Trigger: CCTCTGTATGCCCAAGCCTCATGAAGGGAAACAATT...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATAGTGGAAACATGCCATaGTCCACTTGCTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYSGNMP*STCSNK
Trigger: CTTGTTGGAGCAAGTGGATCATGGCATGTTTCCACT...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp GAATCAGCAGACATTGGGTTAACGGGACAATGGGGAGCCAAGAGATACCATCAATGCATTATCAAGCCATaGAAAGACATGGAGGAAACT +
Preference number: 4 (lower is better)
Translates to: ESADIGLTGQWGAKRYHQCIIKP*KDMEET
Trigger: AGTTTCCTCCATGTCTTTTCATGGCTTGATAATGCA...TTGATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCCAATGTCTGCTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp GAATCAGCAGACATTGGGTTAACGGGACAATGGGGAGCCAAGAGATACCATCAACCTACAAGCAATGCATaGAAATTTCCATTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: ESADIGLTGQWGAKRYHQPTSNA*KFPLVC
Trigger: ACAGACCAATGGAAATTTTCATGCATTGCTTGTAGG...TTGATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCCAATGTCTGCTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TGTCTCTTTGGAGCTGTTGGGTACACCTGCAGATTCAGTCAAAATATGGATGGAGCTCTGCCTTCTTGGTaGATGGCAACTTCATCTATT +
Preference number: 4 (lower is better)
Translates to: CLFGAVGYTCRFSQNMDGALPSW*MATSSI
Trigger: AATAGATGAAGTTGCCATTCACCAAGAAGGCAGAGC...TCCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR TCA 90 bp TACTTATTTCTGCATAGACACGGTAACAGTCTGATCTCTCTTTTCCCATTTCCCGTCTTACCCTTCCCATaGGGCCATATCTCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: YLFLHRHGNSLISLFPFPVLPFP*GHISGY
Trigger: ATAGCCTGAGATATGGCCTCATGGGAAGGGTAAGAC...GGGAAATGGGAAAAGAGAGATCAGACTGTTACCGTGTCTATGCAGAAATAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR GCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATGTTCACAAGACACGGTaGTGGGGGTCAAAACACAAA +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYVHKTR*WGSKHK
Trigger: TTTGTGTTTTGACCCCCAGCACCGTGTCTTGTGAAC...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCTCCACACAAAAAGCCTaGACAGATATTTATAACAGC +
Preference number: 4 (lower is better)
Translates to: LILTGCCHWALLAWIPSISTQKA*TDIYNS
Trigger: GCTGTTATAAATATCTGTGCAGGCTTTTTGTGTGGA...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGAAACAGACTGGTGATTaGCAAGGGCTGGGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGKQTGD*QGLGVG
Trigger: TCCCACTCCCAGCCCTTGGCAATCACCAGTCTGTTT...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAGGGCAATTATACAATTaGTGTGAACATCTGAGTATA +
Preference number: 4 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKGQLYN*CEHLSI
Trigger: TATACTCAGATGTTCACAGCAATTGTATAATTGCCC...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGGTAAAACAGGAAAAATaGCCAGGCGTCATGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTVKQEK*PGVMAL
Trigger: AAGGGCCATGACGCCTGGCCATTTTTCCTGTTTTAC...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTACACAGAATGGAGAGTaGACCTTACTAGACATTGTC +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSTQNGE*TLLDIV
Trigger: GACAATGTCTAGTAAGGTCCACTCTCCATTCTGTGT...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCCCGCATGAAGCAATGTaGGAAATTGGGAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLPHEAM*EIGNQQ
Trigger: CTGCTGATTCCCAATTTCCCACATTGCTTCATGCGG...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCGGATTAGGGGATATATaGGAAACCTCTGTAATTTCT +
Preference number: 4 (lower is better)
Translates to: LILTGCCHWALLAWIPSIGLGDI*ETSVIS
Trigger: AGAAATTACAGAGGTTTCCCATATATCCCCTAATCC...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp GAATCAGCAGACATTGGGTTAACGGGACAATGGGGAGCCAAGAGATACCATCAAAGCCATGAAAAGACATaGAGGAAACTGAAATCCACA +
Preference number: 4 (lower is better)
Translates to: ESADIGLTGQWGAKRYHQSHEKT*RKLKST
Trigger: TGTGGATTTCAGTTTCCTCCATGTCTTTTCATGGCT...TTGATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCCAATGTCTGCTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGGTGATTGCCAAGGGCTaGGAGTGGGAAAAGGGACTA +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGVIAKG*EWEKGL
Trigger: TAGTCCCTTTTCCCACTCCCAGCCCTTGGCAATCAC...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGAAGATGCACGGGCACTaGAGAAGCAGAGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGKMHGH*RSRALS
Trigger: TGAGAGTGCTCTGCTTCTCCAGTGCCCGTGCATCTT...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGGTAGGATACTCAGTTTaGTACTGCCCTGACATGGAG +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTVGYSV*YCPDME
Trigger: CTCCATGTCAGGGCAGTACCAAACTGAGTATCCTAC...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR TCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAATGAGGGTTGGATATaGCCAACTGTGGTAGATTCG +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTNEGWI*PTVVDS
Trigger: CGAATCTACCACAGTTGGTCATATCCAACCCTCATT...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292841.10
ENST00000356958.8
ENST00000392157.2
CDS-3UTR TCA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTTTAGATACTGCTAGGTaGGTAACGGGAGATAATTGT +
Preference number: 4 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSLDTAR*VTGDNC
Trigger: ACAATTATCTCCCGTTACTCACCTAGCAGTATCTAA...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACAGTCACCGCCATTGCCTaGGGGGAAGGAAGAAAGTTA +
Preference number: 4 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTVTAIA*GEGRKL
Trigger: TAACTTTCTTCCTTCCCCTCAGGCAATGGCGGTGAC...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGATCTTCCAGGGATCATaGCCATGCAAACATGGAGAT +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTIFQGS*PCKHGD
Trigger: ATCTCCATGTTTGCATGGTCATGATCCCTGGAAGAT...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACACAGCTTGTGGTCTCCTaGGATCTCCAGATCATCCCT +
Preference number: 4 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTQLVVS*DLQIIP
Trigger: AGGGATGATCTGGAGATCTCAGGAGACCACAAGCTG...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCGGATTTTTAGGGCAGTaGAACTACTCTGTGTATAAC +
Preference number: 4 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGGFLGQ*NYSVYN
Trigger: GTTATACACAGAGTAGTTTCACTGCCCTAAAAATCC...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCGATTGTGGTGTTGATTaGATGATTAGATACAACTGT +
Preference number: 4 (lower is better)
Translates to: LILTGCCHWALLAWIPSIDCGVD*MIRYNC
Trigger: ACAGTTGTATCTAATCATGCAATCAACACCACAATC...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATGGTCATCACACAGAATaGAGAGTGGACCTTACTAGA +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYGHHTE*RVDLTR
Trigger: TCTAGTAAGGTCCACTCTCCATTCTGTGTGATGACC...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGGGAATCAGCAGACATTaGGTTAACGGGACAATGGGG +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGGISRH*VNGTMG
Trigger: CCCCATTGTCCCGTTAACCCAATGTCTGCTGATTCC...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCATGGAGATGCAATCTTaGGGGAAGTACAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLMEMQS*GKYSSQ
Trigger: TTGGCTACTGTACTTCCCCCAAGATTGCATCTCCAT...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp TTGGAGTGGGTTGCTGAGAACATAGCAGTTGTTTCACTAATCCCAGTAAAAACCACTTTGGCTTTGGAGTaGGTTGCTGAGAACATAGCA +
Preference number: 4 (lower is better)
Translates to: LEWVAENIAVVSLIPVKTTLALE*VAENIA
Trigger: TGCTATGTTCTCAGCAACCCACTCCAAAGCCAAAGT...GGTTTTTACTGGGATTAGTGAAACAACTGCTATGTTCTCAGCAACCCACTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588354.1
3UTR CAA 72 bp ATTGCAGTGTTTCTGTCTCCGTGGAGGTGCTTTTCTTaGCATCTCCGACAGGTTCATTGTAGAACTTCAAAT +
Preference number: 4 (lower is better)
Translates to: IAVFLSPWRCFS*HLRQVHCRTSN
Trigger: ATTTGAAGTTCTACAATGAACCTGTCGGAGATGCAAAGAAAAGCACCTCCACGGAGACAGAAACACTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR TCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGAATGGGTCTTCTGGATaGAGGCCTGTCCGCATTCAA +
Preference number: 4 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVNGSSG*RPVRIQ
Trigger: TTGAATGCGGACAGGCCTTCATCCAGAAGACCCATT...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCGAGTTGGAAGAACTATaGCAGCAGAAGGGAGATTTA +
Preference number: 4 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLELEEL*QQKGDL
Trigger: TAAATCTCCCTTCTGCTGTCATAGTTCTTCCAACTC...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATGAGTTGGAAGAACTATaGCAGCAGAAGGGAGATTTA +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYELEEL*QQKGDL
Trigger: TAAATCTCCCTTCTGCTGTCATAGTTCTTCCAACTC...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGTACAGTAGCCAAGGGTaGCTAAGGAACCGCATGAAG +
Preference number: 4 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVYSSQG*LRNRMK
Trigger: CTTCATGCGGTTCCTTAGTCACCCTTGGCTACTGTA...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGGTTGGCACCAGAATTTaGACCAACATAGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTVGTRI*TNIDSF
Trigger: AAAGCTGTCTATGTTGGTTCAAATTCTGGTGCCAAC...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACACATGTTACCAATCTGTaGGGGGCATCTGGTCAACCT +
Preference number: 4 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTHVTNL*GASGQP
Trigger: AGGTTGACCAGATGCCCCGCACAGATTGGTAACATG...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp TACTTATTTCTGCATAGACACGGTAACAGTCTGATCTCTCTTTTCCCATTTCCCTGCGTTGGCAACCTCTaGTTGCAGAAATGTGTAACA +
Preference number: 4 (lower is better)
Translates to: YLFLHRHGNSLISLFPFPCVGNL*LQKCVT
Trigger: TGTTACACATTTCTGCAAGCAGAGGTTGCCAACGCA...GGGAAATGGGAAAAGAGAGATCAGACTGTTACCGTGTCTATGCAGAAATAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR GCA 90 bp ACCAGTAAGATGTTGTTCTGCAGGAGTAGTAGTCTGATTTCAGATGCTATTGCCTACAATCATCAAAGCTaGAAGCAGCATACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TSKMLFCRSSSLISDAIAYNHQS*KQHTLW
Trigger: CCAGAGAGTATGCTGCTTGCAGCTTTGATGATTGTA...GGCAATAGCATCTGAAATCAGACTACTACTCCTGCAGAACAACATCTTACTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGGAGGGTTGTAATAAGTaGTCATCACACAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTEGCNK*SSHRME
Trigger: CTCCATTCTGTGTGATGACCACTTATTACAACCCTC...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGCCGCATGAAGCAATGTaGGAAATTGGGAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGPHEAM*EIGNQQ
Trigger: CTGCTGATTCCCAATTTCCCACATTGCTTCATGCGG...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATGATGTGTTACTTCAATaGCAGGATAAGATGGGGATG +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYDVLLQ*QDKMGM
Trigger: CATCCCCATCTTATCCTGCCATTGAAGTAACACATC...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp AGAATTTTCTTGGTACAGAACAAAACGGAGTCTCTTATGTCTACTTATTTCTGCTTGCCAGTCCTGCGTTaGCAACCTCTGCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: RIFLVQNKTESLMSTYFCLPVLR*QPLLAE
Trigger: TTCTGCAAGCAGAGGTTGCCAACGCAGGACTGGCAA...GCAGAAATAAGTAGACATAAGAGACTCCGTTTTGTTCTGTACCAAGAAAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR TCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACAGAATTCTCTGATGCCTaGAGAGGGACGACACTTGAA +
Preference number: 4 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTEFSDA*RGTTLE
Trigger: TTCAAGTGTCGTCCCTCTTCAGGCATCAGAGAATTC...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCATGTATATTGAGGTGTaGCTTCTGAGTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLMYIEV*LLSEGF
Trigger: AAAGCCTTCACTCAGAAGTCACACCTCAATATACAT...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292841.10
ENST00000356958.8
ENST00000392157.2
CDS-3UTR TCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGAATGAGGGTTGGATATaGCCAACTGTGGTAGATTCG +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGNEGWI*PTVVDS
Trigger: CGAATCTACCACAGTTGGTCATATCCAACCCTCATT...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATGGATTTTTAGGGCAGTaGAACTACTCTGTGTATAAC +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYGFLGQ*NYSVYN
Trigger: GTTATACACAGAGTAGTTTCACTGCCCTAAAAATCC...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGTGCATTATCAAGCCATaGAAAGACATGGAGGAAACT +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTCIIKP*KDMEET
Trigger: AGTTTCCTCCATGTCTTTTCATGGCTTGATAATGCA...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACAAAGAAGTTAGGGAAGTaGGGGGCCTGTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTKKLGK*GACSSS
Trigger: AGATGAAGAACAGGCCCCTCACTTCCCTAACTTCTT...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGAAGAAGTTAGGGAAGTaGGGGGCCTGTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVKKLGK*GACSSS
Trigger: AGATGAAGAACAGGCCCCTCACTTCCCTAACTTCTT...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGCCTACAAGCAATGCATaGAAATTTCCATTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTPTSNA*KFPLVC
Trigger: ACAGACCAATGGAAATTTTCATGCATTGCTTGTAGG...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp GCTTTTCTTTGCATCTCCGACAGGTTCATTGTAGAACTTCAAATGTCTAGTTGGCTGATTTTCTCCTGGTaGAACACAAGCAAAACCTCT +
Preference number: 4 (lower is better)
Translates to: AFLCISDRFIVELQMSSWLIFSW*NTSKTS
Trigger: AGAGGTTTTGCTTGTGTTTCACCAGGAGAAAATCAG...CCAACTAGACATTTGAAGTTCTACAATGAACCTGTCGGAGATGCAAAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR GCA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCATAGAGCTTTTCTCCTaGAAGAACTTTCAGGTGTAC +
Preference number: 4 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLIELFS*KNFQVY
Trigger: GTACACCTGAAAGTTCTTGCAGGAGAAAAGCTCTAT...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292841.10
ENST00000356958.8
ENST00000392157.2
CDS-3UTR GCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGATAGAGCTTTTCTCCTaGAAGAACTTTCAGGTGTAC +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTIELFS*KNFQVY
Trigger: GTACACCTGAAAGTTCTTGCAGGAGAAAAGCTCTAT...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292841.10
ENST00000356958.8
ENST00000392157.2
CDS-3UTR GCA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCAGCTTTCCTCATAATTaGCAAAAGGAAGCATCCAAC +
Preference number: 4 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLSFPHN*QKEASN
Trigger: GTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCT...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATAGCTTTCCTCATAATTaGCAAAAGGAAGCATCCAAC +
Preference number: 4 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYSFPHN*QKEASN
Trigger: GTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCT...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGTTGACTAACTCCAACTaGAGACTCTCTGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGLTNSN*RLSGLF
Trigger: AAAGAGGCCAGAGAGTCTGCAGTTGGAGTTAGTCAA...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGTACTCAGTTTGGTACTaGCCTGACATGGAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGYSVWY*PDMELE
Trigger: CTCTAACTCCATGTCAGGGCAGTACCAAACTGAGTA...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGGGAATGCTGATAATGTaGGAGGCTATGCATATGTGG +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGGMLIM*EAMHMW
Trigger: CCACATATGCATAGCCTCCCACATTATCAGCATTCC...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGTCTGTGCGGGGCATCTaGTCAACCTCGATATTATTG +
Preference number: 4 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVSVRGI*STSILL
Trigger: CAATAATATCGAGGTTGACCAGATGCCCCGCACAGA...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp TGTCTCTTTGGAGCTGTTGGGTACACCTGCAGATTCAGTCAAAATATGGATGGAGCAGAAGAATTTTCTTaGTACAGAACAAAACGGAGT +
Preference number: 4 (lower is better)
Translates to: CLFGAVGYTCRFSQNMDGAEEFS*YRTKRS
Trigger: ACTCCGTTTTGTTCTGTACCAAGAAAATTCTTCTGC...TCCATCCATATTTTGACTGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR TCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGGTTGGCACCAGAATTTaGACCAACATAGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGVGTRI*TNIDSF
Trigger: AAAGCTGTCTATGTTGGTTCAAATTCTGGTGCCAAC...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR TCA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACATTAACAAGCTTGTACTaGGCATCTGCTTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTLTSLY*ASALSW
Trigger: CCAGCTCAAAGCAGATGCTCAGTACAAGCTTGTTAA...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR TCA 90 bp AGAATTTTCTTGGTACAGAACAAAACGGAGTCTCTTATGTCTACTTATTTCTGCAAAGGTGCTGTGCCTTaGTGTGCACGTGTACAAACA +
Preference number: 4 (lower is better)
Translates to: RIFLVQNKTESLMSTYFCKGAVP*CARVQT
Trigger: TGTTTGTACACGTGCACATCAAGGCACAGCACCTTT...GCAGAAATAAGTAGACATAAGAGACTCCGTTTTGTTCTGTACCAAGAAAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR GCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGCTAATATTAACAGGATaGTGTCATTGGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVLILTG*CHWALL
Trigger: CAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGATAACAGTGGAAACATaGCATGATCCACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGITVET*HDPLAP
Trigger: TGGAGCAAGTGGATCATGGCATGTTTCCACTGTTAT...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGTCCACACAAAAAGCCTaGACAGATATTTATAACAGC +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTSTQKA*TDIYNS
Trigger: GCTGTTATAAATATCTGTGCAGGCTTTTTGTGTGGA...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGGTAAGTGGTATGCTATaGCATGGTGTACGGTATGGT +
Preference number: 4 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVVSGML*HGVRYG
Trigger: ACCATACCGTACACCATGCCATAGCATACCACTTAC...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGACATCAGCCCAGGGGTaGGACTACTGTGTTTATATA +
Preference number: 4 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVTSAQG*DYCVYI
Trigger: TATATAAACACAGTAGTCCCACCCCTGGGCTGATGT...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR TCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGTATAATACAAACACCTaGAGGTGGCAGAAACTAGCA +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGYNTNT*RWQKLA
Trigger: TGCTAGTTTCTGCCACCTTCAGGTGTTTGTATTATA...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR GCA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGCAATCCTACAAGCAATaGATGAAAATTTCCATTGGT +
Preference number: 4 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTQSYKQ*MKISIG
Trigger: ACCAATGGAAATTTTCATGCATTGCTTGTAGGATTG...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCCAATCCTACAAGCAATaGATGAAAATTTCCATTGGT +
Preference number: 4 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLQSYKQ*MKISIG
Trigger: ACCAATGGAAATTTTCATGCATTGCTTGTAGGATTG...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp GGAGTCTCTTATGTCTACTTATTTCTGCATAGACACGGTAACAGTCTGATCTCTGTACAAACATCTCGGTaGATTAAAGAGCAGTATTAC +
Preference number: 4 (lower is better)
Translates to: GVSYVYLFLHRHGNSLISVQTSR*IKEQYY
Trigger: GTAATACTGCTCTTTAATGCACCGAGATGTTTGTAC...AGAGATCAGACTGTTACCGTGTCTATGCAGAAATAAGTAGACATAAGAGACTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CCA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGGGATTAGGGGATATATaGGAAACCTCTGTAATTTCT +
Preference number: 4 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGGLGDI*ETSVIS
Trigger: AGAAATTACAGAGGTTTCCCATATATCCCCTAATCC...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
3UTR CAA 72 bp TACAGATTAACAGCATCTCAAGGCAGAAGAATTTTCTaGGTACAGAACAAAACGGAGTCTCTTATGTCTACT +
Preference number: 4 (lower is better)
Translates to: YRLTASQGRRIF*VQNKTESLMST
Trigger: AGTAGACATAAGAGACTCCGTTTTGTTCTGTACCAAGAAAATTCTTCTGCCTTGAGATGCTGTTAATCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR TCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGACTCAACATACATTCTaGGGTTTACGTCTGTATACA +
Preference number: 4 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVTQHTF*GLRLYT
Trigger: TGTATACAGACGTAAACCTCAGAATGTATGTTGAGT...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGGATTGTGGTGTTGATTaGATGATTAGATACAACTGT +
Preference number: 4 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVDCGVD*MIRYNC
Trigger: ACAGTTGTATCTAATCATGCAATCAACACCACAATC...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR GCA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGGGGCAATTATACAATTaGTGTGAACATCTGAGTATA +
Preference number: 4 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVGQLYN*CEHLSI
Trigger: TATACTCAGATGTTCACAGCAATTGTATAATTGCCC...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp ATGGCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTTGGGTACACCTGCAGCCCTCGGAAGCTTTCTaGAAGGTGATGGGAGTTCAC +
Preference number: 5 (lower is better)
Translates to: MARSRWSLSLWSCWVHLQPSEAF*KVMGVH
Trigger: GTGAACTCCCATCACCTTCAAGAAAGCTTCCGAGGG...CTGCAGGTGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CAA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAAACAGGATGCTGTCATaGGGCCCTGCTGGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKNRMLS*GPAGLD
Trigger: ATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTT...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCGCACTAGTAGCCCATTaGAGAGCTGAGGGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: LILTGCCHWALLAWIPSIALVAH*RAEGGG
Trigger: CCCTCCACCCTCAGCTCTCAAATGGGCTACTAGTGC...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CAA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAATGTAATCCCAATGCTTaGGGTGGCCGAGGTGGGCAA +
Preference number: 5 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKCNPNA*GGRGGQ
Trigger: TTGCCCACCTCGGCCACCCAAAGCATTGGGATTACA...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CAA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATACCTCGGAAGCTTTCTaGAAGGTGATGGGAGTTCAC +
Preference number: 5 (lower is better)
Translates to: RIESARLDADGSGPLPMDTSEAF*KVMGVH
Trigger: GTGAACTCCCATCACCTTCAAGAAAGCTTCCGAGGT...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CAA 90 bp CGTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTTGGGTACAAAAAGGTGCTGTGCCTaGATGTGCACGTGTACAAAC +
Preference number: 5 (lower is better)
Translates to: RHHGPFSMVAVSLELLGTKRCCA*MCTCTN
Trigger: GTTTGTACACGTGCACATCAAGGCACAGCACCTTTT...TGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CAA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATGGCCTGTTCTTCATCTaGATTGTGGTGTTGATTGCA +
Preference number: 5 (lower is better)
Translates to: RIESARLDADGSGPLPMDGLFFI*IVVLIA
Trigger: TGCAATCAACACCACAATCAAGATGAAGAACAGGCC...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CAA 90 bp CGTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTTGGGTACAGGCAGAAGAATTTTCTaGGTACAGAACAAAACGGAG +
Preference number: 5 (lower is better)
Translates to: RHHGPFSMVAVSLELLGTGRRIF*VQNKTE
Trigger: CTCCGTTTTGTTCTGTACCAAGAAAATTCTTCTGCC...TGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CAA 90 bp CTAATATTAACAGGATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATAGAAACCATTGTATaGCAGGGGGCACACCACTGT +
Preference number: 5 (lower is better)
Translates to: LILTGCCHWALLAWIPSIIETIV*QGAHHC
Trigger: ACAGTGGTGTGCCCCCTGCAATACAATGGTTTCTAT...GATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTTAATATTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATTGTTGGCACCAGAATTaGAACCAACATAGACAGCTT +
Preference number: 5 (lower is better)
Translates to: RIESARLDADGSGPLPMDCWHQN*NQHRQL
Trigger: AAGCTGTCTATGTTGGTTCAAATTCTGGTGCCAACA...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CAA 90 bp ATGCTGTCATTGGGCCCTGCTGGCTTGGATCCCATCCATCATGTGACCCAAAAAGGCTCCAAAATACAGTaGGGAAATGTGGACATTATG +
Preference number: 5 (lower is better)
Translates to: MLSLGPAGLDPIHHVTQKGSKIQ*GNVDIM
Trigger: CATAATGTCCACATTTCCCAACTGTATTTTGGAGCC...TTTTTGGGTCACATGATGGATGGGATCCAAGCCAGCAGGGCCCAATGACAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCAACAGGATGCTGTCATaGGGCCCTGCTGGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLNRMLS*GPAGLD
Trigger: ATCCAAGCCAGCAGGGCCCAATGACAGCATCCTGTT...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCGAAGCTGCCAAACTTTaGTGCATAGTGGACAGACCG +
Preference number: 5 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGEAAKL*CIVDRP
Trigger: CGGTCTGTCCACTATGCACAAAAGTTTGGCAGCTTC...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTGAAGCTGCCAAACTTTaGTGCATAGTGGACAGACCG +
Preference number: 5 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSEAAKL*CIVDRP
Trigger: CGGTCTGTCCACTATGCACAAAAGTTTGGCAGCTTC...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp CGTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTTGGAGCTGTTGGGTACAATTTTATCTTGTGAGTaGATGGTGCTTGATTGCAGT +
Preference number: 5 (lower is better)
Translates to: RHHGPFSMVAVSLELLGTILSCE*MVLDCS
Trigger: ACTGCAATCAAGCACCATCAACTCACAAGATAAAAT...TGTACCCAACAGCTCCAAAGAGACAGCGACCATCGAGAACGGGCCATGATGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CAA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGACAGCATCCACCGTATaGAGGGCATTCCCACATGCT +
Preference number: 5 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTTASTV*RAFPHA
Trigger: AGCATGTGGGAATGCCCTCAATACGGTGGATGCTGT...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGTTGGGCCCTGCTGGCTaGGATCCCATCCATCATGTG +
Preference number: 5 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGLGPAG*DPIHHV
Trigger: CACATGATGGATGGGATCCAAGCCAGCAGGGCCCAA...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp AGGATAGAAAGTGCTAGGCTAGATGCTGATGGGAGTGGCCCCCTGCCTATGGATTCCACTGATGTACATTaGTGTTACTTCCTAATTTGG +
Preference number: 5 (lower is better)
Translates to: RIESARLDADGSGPLPMDSTDVH*CYFLIW
Trigger: CCAAATTAGGAAGTAACACAAATGTACATCAGTGGA...ATCCATAGGCAGGGGGCCACTCCCATCAGCATCTAGCCTAGCACTTTCTATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CAA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATACCTCGGAAGCTTTCTaGAAGGTGATGGGAGTTCAC +
Preference number: 5 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYTSEAF*KVMGVH
Trigger: GTGAACTCCCATCACCTTCAAGAAAGCTTCCGAGGT...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTCTAAGTGGATCAGTGTaGGCACCAGAATTTGAACCA +
Preference number: 5 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSLSGSV*APEFEP
Trigger: TGGTTCAAATTCTGGTGCCAACACTGATCCACTTAG...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACATTGGGCCCTGCTGGCTaGGATCCCATCCATCATGTG +
Preference number: 5 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTLGPAG*DPIHHV
Trigger: CACATGATGGATGGGATCCAAGCCAGCAGGGCCCAA...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp TTGTGCCCAAGTCGGCGGCTCTGCCTTCTTGGTGAATGGCAACTTCATCTATTCATTTCCCATGTCTTATaGTTGTTGTCTTTCCACCAA +
Preference number: 5 (lower is better)
Translates to: LCPSRRLCLLGEWQLHLFISHVL*LLSFHQ
Trigger: TTGGTGGAAAGACAACAACAATAAGACATGGGAAAT...GAATAGATGAAGTTGCCATTCACCAAGAAGGCAGAGCCGCCGACTTGGGCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CAA 90 bp CATCAAAGCTGCAAGCAGCATACTCTCTGGAGTTTGTGTCACCTTTGTGTTCTCCATACTCTCTGGAGTTaGTGTCACCTTTGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: HQSCKQHTLWSLCHLCVLHTLWS*CHLCVL
Trigger: GAGAACACAAAGGTGACACAAACTCCAGAGAGTATG...GAGAACACAAAGGTGACACAAACTCCAGAGAGTATGCTGCTTGCAGCTTTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CAA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCATAGAAACCATTGTATaGCAGGGGGCACACCACTGT +
Preference number: 5 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLIETIV*QGAHHC
Trigger: ACAGTGGTGTGCCCCCTGCAATACAATGGTTTCTAT...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp TACTTATTTCTGCATAGACACGGTAACAGTCTGATCTCTCTTTTCCCATTTCCCGTCTCTTTGGAGCTGTaGGGTACACCTGCAGATTCA +
Preference number: 5 (lower is better)
Translates to: YLFLHRHGNSLISLFPFPVSLEL*GTPADS
Trigger: TGAATCTGCAGGTGTACCCAACAGCTCCAAAGAGAC...GGGAAATGGGAAAAGAGAGATCAGACTGTTACCGTGTCTATGCAGAAATAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CAA 90 bp TTGGAGTGGGTTGCTGAGAACATAGCAGTTGTTTCACTAATCCCAGTAAAAACCGTTTTGACTTTGGCTTaGGAGTGGGTTGCTGAGAAC +
Preference number: 5 (lower is better)
Translates to: LEWVAENIAVVSLIPVKTVLTLA*EWVAEN
Trigger: GTTCTCAGCAACCCACTCCAAAGCCAAAGTCAAAAC...GGTTTTTACTGGGATTAGTGAAACAACTGCTATGTTCTCAGCAACCCACTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588354.1
CDS-3UTR CAA 90 bp TTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGATTGCCAAGGGCAAACTGTTTCCGGAATaGATGAAGTGTGACACACAT +
Preference number: 5 (lower is better)
Translates to: LWKRQNYRDGNRLVIAKGKLFPE*MKCDTH
Trigger: ATGTGTGTCACACTTCATCAATTCCGGAAACAGTTT...GCCCTTGGCAATCACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACAACAGCATCCACCGTATaGAGGGCATTCCCACATGCT +
Preference number: 5 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTTASTV*RAFPHA
Trigger: AGCATGTGGGAATGCCCTCAATACGGTGGATGCTGT...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCCTAAGTGGATCAGTGTaGGCACCAGAATTTGAACCA +
Preference number: 5 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLLSGSV*APEFEP
Trigger: TGGTTCAAATTCTGGTGCCAACACTGATCCACTTAG...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp GAATCAGCAGACATTGGGTTAACGGGACAATGGGGAGCCAAGAGATACCATCAAGTGAAAGAAGTCAATTaGAAAAGGCTACACACTGTA +
Preference number: 5 (lower is better)
Translates to: ESADIGLTGQWGAKRYHQVKEVN*KRLHTV
Trigger: TACAGTGTGTAGCCTTTTCAAATTGACTTCTTTCAC...TTGATGGTATCTCTTGGCTCCCCATTGTCCCGTTAACCCAATGTCTGCTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp TCGAATGAGAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGGGCCTGTTCTTCATCTaGATTGTGGTGTTGATTGCA +
Preference number: 5 (lower is better)
Translates to: SNEKEKHPGVCYTMCSTTGLFFI*IVVLIA
Trigger: TGCAATCAACACCACAATCAAGATGAAGAACAGGCC...CGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTCTCATTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACAGGCTTTAAGCTGACTTaGGCCACGGGGTCAATGTCT +
Preference number: 5 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTGFKLT*ATGSMS
Trigger: AGACATTGACCCCGTGGCCAAAGTCAGCTTAAAGCC...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292841.10
CDS-3UTR CAA 90 bp GCTTTTCTTTGCATCTCCGACAGGTTCATTGTAGAACTTCAAATGTCTAGTTGGTGGAGGTGCTTTTCTTaGCATCTCCGACAGGTTCAT +
Preference number: 5 (lower is better)
Translates to: AFLCISDRFIVELQMSSWWRCFS*HLRQVH
Trigger: ATGAACCTGTCGGAGATGCAAAGAAAAGCACCTCCA...CCAACTAGACATTTGAAGTTCTACAATGAACCTGTCGGAGATGCAAAGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CAA 90 bp TCCTCATCACCATCTTCCAGGGATCATGACCATGCAAACATGGAGATGCAATCTTCCACTGATGTACATTaGTGTTACTTCCTAATTTGG +
Preference number: 5 (lower is better)
Translates to: SSSPSSRDHDHANMEMQSSTDVH*CYFLIW
Trigger: CCAAATTAGGAAGTAACACAAATGTACATCAGTGGA...AGATTGCATCTCCATGTTTGCATGGTCATGATCCCTGGAAGATGGTGATGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp ACCAGTAAGATGTTGTTCTGCAGGAGTAGTAGTCTGATTTCAGATGCTATTGCCGAGTTTGTGTCACCTTaGTGTTCTCAAGGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: TSKMLFCRSSSLISDAIAEFVSP*CSQGLF
Trigger: AAAAAGGCCTTGAGAACACAAAGGTGACACAAACTC...GGCAATAGCATCTGAAATCAGACTACTACTCCTGCAGAACAACATCTTACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CAA 90 bp AGAATTTTCTTGGTACAGAACAAAACGGAGTCTCTTATGTCTACTTATTTCTGCATGGTCGCTGTCTCTTaGGAGCTGTTGGGTACACCT +
Preference number: 5 (lower is better)
Translates to: RIFLVQNKTESLMSTYFCMVAVS*ELLGTP
Trigger: AGGTGTACCCAACAGCTCCAAAGAGACAGCGACCAT...GCAGAAATAAGTAGACATAAGAGACTCCGTTTTGTTCTGTACCAAGAAAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CAA 90 bp GCTTTTCTTTGCATCTCCGACAGGTTCATTGTAGAACTTCAAATGTCTAGTTGGGAATACGGTGCACCATaGATACAATCATCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: AFLCISDRFIVELQMSSWEYGAP*IQSSKL
Trigger: CAGCTTTGATGATTGTATCAATGGTGCACCGTATTC...CCAACTAGACATTTGAAGTTCTACAATGAACCTGTCGGAGATGCAAAGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CAA 90 bp TACTTATTTCTGCATAGACACGGTAACAGTCTGATCTCTCTTTTCCCATTTCCCTTGTGTCCTGGGTACTaGAGATTAGAGAATGGTGAT +
Preference number: 5 (lower is better)
Translates to: YLFLHRHGNSLISLFPFPLCPGY*RLENGD
Trigger: ATCACCATTCTCTAATCTCAAGTACCCAGGACACAA...GGGAAATGGGAAAAGAGAGATCAGACTGTTACCGTGTCTATGCAGAAATAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587817.5
CDS-3UTR CAA 90 bp TTGGAGTGGGTTGCTGAGAACATAGCAGTTGTTTCACTAATCCCAGTAAAAACCATTTTAGTTTTGACTTaGGCTTTGGAGTGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LEWVAENIAVVSLIPVKTILVLT*ALEWVA
Trigger: AGCAACCCACTCCAAAGCCAAAGTCAAAACTAAAAT...GGTTTTTACTGGGATTAGTGAAACAACTGCTATGTTCTCAGCAACCCACTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588354.1
CDS-3UTR CAA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCGCCCTAAACATATGGTaGTGTTGGTTTTCATATAAG +
Preference number: 5 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLALNIW*CWFSYK
Trigger: CTTATATGAAAACCAACACAACCATATGTTTAGGGC...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp AGATACCATCAAAATTTAATGGAGGGGTCAGACACTGTGTTAGTGATTAATGGGTGTTGGCACCAGAATTaGAACCAACATAGACAGCTT +
Preference number: 5 (lower is better)
Translates to: RYHQNLMEGSDTVLVINGCWHQN*NQHRQL
Trigger: AAGCTGTCTATGTTGGTTCAAATTCTGGTGCCAACA...CCCATTAATCACTAACACAGTGTCTGACCCCTCCATTAAATTTTGATGGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp ATACACGTACAAAACACACACACACACACACACACACACAAGGACTCCACTTATACTGATCCTAGGCTATaGTTTTCTTCTACTCTTCAA +
Preference number: 5 (lower is better)
Translates to: IHVQNTHTHTHTHKDSTYTDPRL*FSSTLQ
Trigger: TTGAAGAGTAGAAGAAAACAATAGCCTAGGATCAGT...ATAAGTGGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTACGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356958.8
CDS-3UTR CAA 90 bp GAAAGAAAAACACCCAGGAGTCTGTTACACAATGTGTTCCACAACGAACAACTCACTGATCCTAGGCTATaGTTTTCTTCTACTCTTCAA +
Preference number: 5 (lower is better)
Translates to: ERKTPRSLLHNVFHNEQLTDPRL*FSSTLQ
Trigger: TTGAAGAGTAGAAGAAAACAATAGCCTAGGATCAGT...GAGTTGTTCGTTGTGGAACACATTGTGTAACAGACTCCTGGGTGTTTTTCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356958.8
ENST00000392157.2
CDS-3UTR CAA 90 bp GCACAGATATTTATAACAGCTTTCCTCATAATTGCCAAAAGGAAGCATCCAACAGGCTCCAAAATACAGTaGGGAAATGTGGACATTATG +
Preference number: 5 (lower is better)
Translates to: AQIFITAFLIIAKRKHPTGSKIQ*GNVDIM
Trigger: CATAATGTCCACATTTCCCAACTGTATTTTGGAGCC...TGTTGGATGCTTCCTTTTGGCAATTATGAGGAAAGCTGTTATAAATATCTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGAAACTGTTTCCGGAATaGATGAAGTGTGACACACAT +
Preference number: 5 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVKLFPE*MKCDTH
Trigger: ATGTGTGTCACACTTCATCAATTCCGGAAACAGTTT...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS-3UTR CAA 90 bp ACTTATACAATATTATGGAAAAGGCAGAACTATAGAGACGGAAACAGACTGGTGGTGAAAGAAGTCAATTaGAAAAGGCTACACACTGTA +
Preference number: 5 (lower is better)
Translates to: TYTILWKRQNYRDGNRLVVKEVN*KRLHTV
Trigger: TACAGTGTGTAGCCTTTTCAAATTGACTTCTTTCAC...CACCAGTCTGTTTCCGTCTCTATAGTTCTGCCTTTTCCATAATATTGTATAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292841.10
ENST00000356958.8
CDS CAA 72 bp CCAGAGACACCCAGAAACCTCAAAGATTTATCGGTATaGGAATATGAAAATACTCCTGACACCAGCGGCAAA +
Preference number: 6 (lower is better)
Translates to: PETPRNLKDLSV*EYENTPDTSGK
Trigger: TTTGCCGCTGGTGTCAGGAGTATTTTCATATTCCAATACCGATAAATCTTTGAGGTTTCTGGGTGTCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292841.10
ENST00000356958.8
ENST00000587817.5
ENST00000588354.1
ENST00000588723.5
CDS TCA 72 bp TTCTCCTGCAAGAACTTTCAGGTGTACTTTGAGCTGTaGCTTCTGGGTGAATATCTTTTCAAATTTGGCGCA +
Preference number: 6 (lower is better)
Translates to: FSCKNFQVYFEL*LLGEYLFKFGA
Trigger: TGCGCCAAATTTGAAAAGATATTCACCCAGAAGTCACAGCTCAAAGTACACCTGAAAGTTCTTGCAGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292841.10
ENST00000356958.8
ENST00000392157.2