RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF575 (Homo sapiens)

Ensembl gene IDs: ENSG00000176472

Ensembl transcript IDs: ENST00000314228.9, ENST00000458714.2, ENST00000598080.5, ENST00000600154.1, ENST00000601282.1

Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGAGATCTCCCCAAAGCAGGGGAGCAAAGAGTTCCTCGGGCTTCTaGGCTCGAGCCCAGTATAAATGGCCAATCCCTTGCCCTGCCCTC +
Preference number: 1 (lower is better)
Translates to: LRSPQSRGAKSSSGF*ARAQYKWPIPCPAL
Trigger: GAGGGCAGGGCAAGGGATTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGGAACTCTTTGCTCCCCTGCTTTGGGGAGATCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR TCA 90 bp GAAGCAGAGCCAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTaGGATCTCCCCAAAGCAGGGGAGCAAAGAGTTCCTCGGGCTTCT +
Preference number: 1 (lower is better)
Translates to: EAEPALSNHSSTSMV*DLPKAGEQRVPRAS
Trigger: AGAAGCCCGAGGAACTCTTTGCTCCCCTGCTTTGGGGAGATCTCAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTGGCTCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR CCA 90 bp CATGTATGTATTTTCAATTTCTTAGATACCGTCATATGGCCAAAGTaGAGACACCAGTTTAAACTTTTAACAAGAGAGCCTGTTTGCCCA +
Preference number: 1 (lower is better)
Translates to: HVCIFNFLDTVIWPK*RHQFKLLTREPVCP
Trigger: TGGGCAAACAGGCTCTCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATATGACGGTATCTAAGAAATTGAAAATACATACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR CAA 90 bp GCCCACAATCCTCATCAACCCACGATAGTAGCAGACTTTTTACCTTaGCCATGTAAGTGTGTGGGGAGAAGCAGAGCCAGCGCTGTCAAA +
Preference number: 2 (lower is better)
Translates to: AHNPHQPTIVADFLP*PCKCVGRSRASAVK
Trigger: TTTGACAGCGCTGGCTCTGCTTCTCCCCACACACTTACATGGCAAAGGTAAAAAGTCTGCTACTATCGTGGGTTGATGAGGATTGTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR-3UTR CCA 90 bp ACCGTCATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGAGAGCCTAATCCCACCTCTTACTaGCTAGGGCTGGCGGCAGAA +
Preference number: 2 (lower is better)
Translates to: TVIWPKWRHQFKLLTREPNPTSY*LGLAAE
Trigger: TTCTGCCGCCAGCCCTAGCCAGTAAGAGGTGGGATT...AGGCTCTCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATATGACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR-3UTR TCA 90 bp AAACTTTTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTAGTTCCTCGGGCTTCTaGGCTCGAGCCCAGTATAAA +
Preference number: 2 (lower is better)
Translates to: KLLTREPVCPQSSSTHDSSSSGF*ARAQYK
Trigger: TTTATACTGGGCTCGAGCTCAGAAGCCCGAGGAACT...ACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAAAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR-3UTR TCA 90 bp AAGCATGTATGTATTTTCAATTTCTTAGATACCGTCATATGGCCAAAGTGGAGATCCACGTCCATGGTTTaGGATCTCCCCAAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: KHVCIFNFLDTVIWPKWRSTSMV*DLPKAG
Trigger: CCCTGCTTTGGGGAGATCTCAAACCATGGACGTGGA...TCTCCACTTTGGCCATATGACGGTATCTAAGAAATTGAAAATACATACATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR-3UTR CCA 90 bp AAGCATGTATGTATTTTCAATTTCTTAGATACCGTCATATGGCCAAAGTGGAGACGAGCCCAGTATAAATaGCCAATCCCTTGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: KHVCIFNFLDTVIWPKWRRAQYK*PIPCPA
Trigger: GGCAGGGCAAGGGATTGGCCATTTATACTGGGCTCG...TCTCCACTTTGGCCATATGACGGTATCTAAGAAATTGAAAATACATACATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR-3UTR GCA 90 bp GCATGTATGTATTTTCAATTTCTTAGATACCGTCATATGGCCAAAGTGGAGACAACAAGAGAGCCTGTTTaGCCACAATCCTCATCAACC +
Preference number: 2 (lower is better)
Translates to: ACMYFQFLRYRHMAKVETTREPV*PQSSST
Trigger: GGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGT...TGTCTCCACTTTGGCCATATGACGGTATCTAAGAAATTGAAAATACATACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR TCA 72 bp CCCCAAAGCAGGGGAGCAAAGAGTTCCTCGGGCTTCTaGGCTCGAGCCCAGTATAAATGGCCAATCCCTTGC +
Preference number: 3 (lower is better)
Translates to: PQSRGAKSSSGF*ARAQYKWPIPC
Trigger: GCAAGGGATTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGGAACTCTTTGCTCCCCTGCTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR GCA 72 bp GCCCAGTATAAATGGCCAATCCCTTGCCCTGCCCTCTaGCAGCTATCTGGAAGAGGCGAGCTCATACAGTCG +
Preference number: 3 (lower is better)
Translates to: AQYKWPIPCPAL*QLSGRGELIQS
Trigger: CGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCAGGGCAAGGGATTGGCCATTTATACTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR CCA 72 bp CAGAGCCAGCGCTGTCAAACCACAGCTCCACGTCCATaGTTTGAGATCTCCCCAAAGCAGGGGAGCAAAGAG +
Preference number: 3 (lower is better)
Translates to: QSQRCQTTAPRP*FEISPKQGSKE
Trigger: CTCTTTGCTCCCCTGCTTTGGGGAGATCTCAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR TCA 72 bp CCAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTaGGATCTCCCCAAAGCAGGGGAGCAAAGAGTTCCT +
Preference number: 3 (lower is better)
Translates to: PALSNHSSTSMV*DLPKAGEQRVP
Trigger: AGGAACTCTTTGCTCCCCTGCTTTGGGGAGATCTCAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR GCA 72 bp AGACACCAGTTTAAACTTTTAACAAGAGAGCCTGTTTaGCCACAATCCTCATCAACCCACGATAGTAGCAGA +
Preference number: 3 (lower is better)
Translates to: RHQFKLLTREPV*PQSSSTHDSSR
Trigger: TCTGCTACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAAAAGTTTAAACTGGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
3UTR CCA 72 bp ATTTTCAATTTCTTAGATACCGTCATATGGCCAAAGTaGAGACACCAGTTTAAACTTTTAACAAGAGAGCCT +
Preference number: 3 (lower is better)
Translates to: IFNFLDTVIWPK*RHQFKLLTREP
Trigger: AGGCTCTCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATATGACGGTATCTAAGAAATTGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp CCTCGGGCTTCTGAGCTCGAGCCCAGTATAAATGGCCAATCCCTTGCCCTGCCCGGGCGCCGCTGTGCGTaGGGCGGTGGGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PRASELEPSINGQSLALPGRRCA*GGGLPA
Trigger: AGCTGGCAGCCCACCGCCTCACGCACAGCGGCGCCC...GGGCAGGGCAAGGGATTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp GGGAGAAGCAGAGCCAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTGAGAGTGGCGTGGTGCGTGTaGCGGTGGGCCGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GRSRASAVKPQLHVHGLRVAWCV*RWAASL
Trigger: CAAGCTGGCGGCCCACCGCCACACGCACCACGCCAC...TCTCAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTGGCTCTGCTTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp CCACAGCTCCACGTCCATGGTTTGAGATCTCCCCAAAGCAGGGGAGCAAAGAGTGGTGGGCCCTGGAGCTaGCTGGCTGGGCTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: PQLHVHGLRSPQSRGAKSGGPWS*LAGLLR
Trigger: CCGCAGAAGCCCAGCCAGTCAGCTCCAGGGCCCACC...ACTCTTTGCTCCCCTGCTTTGGGGAGATCTCAAACCATGGACGTGGAGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp TGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTGGGCGCCGCTGTGCGTaGGGCGGTGGGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CQLSGRGELIQSVLEIPPGRRCA*GGGLPA
Trigger: AGCTGGCAGCCCACCGCCTCACGCACAGCGGCGCCC...AGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR GCA 90 bp CCTGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAACGCTGTCGCCGCTGCTaGACTGCCCTCGGACCAGCG +
Preference number: 4 (lower is better)
Translates to: PALCQLSGRGELIQSVLERCRRC*TALGPA
Trigger: CGCTGGTCCGAGGGCAGTGCAGCAGCGGCGACAGCG...TTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS-3UTR CCA 90 bp GGGAGAAGCAGAGCCAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTGAGAACGGGTAGGGGCGGGTaGGTGCGTGGGTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GRSRASAVKPQLHVHGLRTGRGG*VRGSRG
Trigger: ACCTCTGGACCCACGCACCCACCCGCCCCTACCCGT...TCTCAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTGGCTCTGCTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp AGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGTGCCAGGCAGTCGCCTaGCTGCCGGGCGCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RRAHTVGLRNPTSYWLGLCQAVA*LPGAVG
Trigger: CCCAACCGCGCCCGGCAGCCAGGCGACTGCCTGGCA...CAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp GTGGGGAGAAGCAGAGCCAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTGGGGCTGCAGCGTCAGTaGAATGGGAAGCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VGRSRASAVKPQLHVHGLGLQRQ*NGKLGP
Trigger: GGGCCCCAGCTTCCCATTCCACTGACGCTGCAGCCC...CAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTGGCTCTGCTTCTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp CTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCGGTGGGCCCTGGAGCTaGCTGGCTGGGCTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: LPAIWKRRAHTVGLRNPTGGPWS*LAGLLR
Trigger: CCGCAGAAGCCCAGCCAGTCAGCTCCAGGGCCCACC...GGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR TCA 90 bp GGGGAGCAAAGAGTTCCTCGGGCTTCTGAGCTCGAGCCCAGTATAAATGGCCAAGGGGGCCTGGGATCCTaGGTCCTTGGGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GEQRVPRASELEPSINGQGGLGS*VLGEEG
Trigger: TCCCTCCTCCCCAAGGACTCAGGATCCCAGGCCCCC...TTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGGAACTCTTTGCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp ACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGGCGGCAGAAGGGCGTGAGGCGGTGGGCTaGCAGCTTGGAGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: TVGLRNPTSYWLGLAAEGREAVG*QLGGVG
Trigger: TCCTACCCCTCCAAGCTGGCAGCCCACCGCCTCACG...CCCTTCTGCCGCCAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR GCA 90 bp CCTGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAGTAGGGGCGGGTGGGTaGGTGGGTCCAGAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PALCQLSGRGELIQSVLEVGAGG*VGPEVS
Trigger: GCTCACCTCTGGACCCACGCACCCACCCGCCCCTAC...TTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR GCA 90 bp ACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGGCGGCAGAAGGGCAGCTGGAGCATCGGTaGCAGGCAGTCGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TVGLRNPTSYWLGLAAEGQLEHR*QAVAWL
Trigger: CAGCCAGGCGACTGCCTGGCACCGATGCTCCAGCTG...CCCTTCTGCCGCCAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp GTCCATGGTTTGAGATCTCCCCAAAGCAGGGGAGCAAAGAGTTCCTCGGGCTTCGCTGGGCTTCTGCGGTaGGCCCTGGTGGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VHGLRSPQSRGAKSSSGFAGLLR*ALVGSF
Trigger: GAAGCTCCCCACCAGGGCCCACCGCAGAAGCCCAGC...GAAGCCCGAGGAACTCTTTGCTCCCCTGCTTTGGGGAGATCTCAAACCATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp CCTGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAGCTGGGCTTCTGCGGTaGGCCCTGGTGGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PALCQLSGRGELIQSVLEAGLLR*ALVGSF
Trigger: GAAGCTCCCCACCAGGGCCCACCGCAGAAGCCCAGC...TTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp TGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATAGCCCGCGGACGCGGTaGGCCCTGGAGCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: CPLPAIWKRRAHTVGLRNSPRTR*ALELTG
Trigger: GCCAGTCAGCTCCAGGGCCCACCGCGTCCGCGGGCT...ATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp TGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTAGCCCGCGGACGCGGTaGGCCCTGGAGCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: CQLSGRGELIQSVLEIPPSPRTR*ALELTG
Trigger: GCCAGTCAGCTCCAGGGCCCACCGCGTCCGCGGGCT...AGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp CCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTGGGGCAGTCTGGGCATaGGTGGGGTCGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PAIWKRRAHTVGLRNPTSGAVWA*VGSGAS
Trigger: GGAGGCGCCCGACCCCACCCATGCCCAGACTGCCCC...AGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp CCTGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAACGGGTAGGGGCGGGTaGGTGCGTGGGTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PALCQLSGRGELIQSVLETGRGG*VRGSRG
Trigger: ACCTCTGGACCCACGCACCCACCCGCCCCTACCCGT...TTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp CTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCAAGGGGCGGGCGTCGGTaGCGTGGTGCGTGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: LCQLSGRGELIQSVLEIPRGGRR*RGACGG
Trigger: ACCGCCACACGCACCACGCCACCGACGCCCGCCCCT...TGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp CCTGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAAGGCCTGGCCGCAGCTaGAGCATCGGTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PALCQLSGRGELIQSVLERPGRS*SIGARQ
Trigger: CTGCCTGGCACCGATGCTCCAGCTGCGGCCAGGCCT...TTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp ACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGGCGGCAGAAGGGCTCTGGCCAAAGGCCTaGCCGCAGCTGGAGCATCGG +
Preference number: 4 (lower is better)
Translates to: TVGLRNPTSYWLGLAAEGLWPKA*PQLEHR
Trigger: CCGATGCTCCAGCTGCGGCCAGGCCTTTGGCCAGAG...CCCTTCTGCCGCCAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR TCA 90 bp CTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCAGCGTGGGTCCAGAGGTaGGCCGCCAGCTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LCQLSGRGELIQSVLEIPAWVQR*AASLER
Trigger: CCGCTCCAAGCTGGCGGCTCACCTCTGGACCCACGC...TGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR GCA 90 bp CAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTGAGATCTCCCCAAAGCAGCCGTGTGCTAAGCGGTaGGTGGCCAGCTTGGACGGG +
Preference number: 4 (lower is better)
Translates to: QRCQTTAPRPWFEISPKQPCAKR*VASLDG
Trigger: CCCGTCCAAGCTGGCCACGCACCGCTTAGCACACGG...CTGCTTTGGGGAGATCTCAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp AGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGGTAGGGGCGGGTGGGTaGGTGGGTCCAGAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RRAHTVGLRNPTSYWLGLVGAGG*VGPEVS
Trigger: GCTCACCTCTGGACCCACGCACCCACCCGCCCCTAC...CAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR GCA 90 bp CCTGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAACAGCTGGAGCATCGGTaGCAGGCAGTCGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PALCQLSGRGELIQSVLEQLEHR*QAVAWL
Trigger: CAGCCAGGCGACTGCCTGGCACCGATGCTCCAGCTG...TTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp TGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATGTGGCGTGGTGCGTGTaGCGGTGGGCCGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CPLPAIWKRRAHTVGLRNVAWCV*RWAASL
Trigger: CAAGCTGGCGGCCCACCGCCACACGCACCACGCCAC...ATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp ACTTTTTACCTTTGCCATGTAAGTGTGTGGGGAGAAGCAGAGCCAGCGCTGTCAAGGGGCGGGCGTCGGTaGCGTGGTGCGTGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: TFYLCHVSVWGEAEPALSRGGRR*RGACGG
Trigger: ACCGCCACACGCACCACGCCACCGACGCCCGCCCCT...TGACAGCGCTGGCTCTGCTTCTCCCCACACACTTACATGGCAAAGGTAAAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp CTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCAGGCCTGGCCGCAGCTaGAGCATCGGTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LPAIWKRRAHTVGLRNPTRPGRS*SIGARQ
Trigger: CTGCCTGGCACCGATGCTCCAGCTGCGGCCAGGCCT...GGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp GGGGAGCAAAGAGTTCCTCGGGCTTCTGAGCTCGAGCCCAGTATAAATGGCCAAGAGGCTCTGGGCAGGTaGGGCACTGGCGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: GEQRVPRASELEPSINGQEALGR*GTGGTP
Trigger: AGGAGTTCCGCCAGTGCCCCACCTGCCCAGAGCCTC...TTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGGAACTCTTTGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp GGGGAGCAAAGAGTTCCTCGGGCTTCTGAGCTCGAGCCCAGTATAAATGGCCAAAGGGGACTGGGGGCCTaGGATCCTGAGTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GEQRVPRASELEPSINGQRGLGA*DPESLG
Trigger: CCCCAAGGACTCAGGATCCCAGGCCCCCAGTCCCCT...TTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGGAACTCTTTGCTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp TGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATGACTGGCTGGGCTTCTaGGGTGGGCCCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: CPLPAIWKRRAHTVGLRNDWLGF*GGPWWG
Trigger: TCCCCACCAGGGCCCACCGCAGAAGCCCAGCCAGTC...ATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR GCA 90 bp CTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCCGTGAGGCGGTGGGCTaGCAGCTTGGAGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LPAIWKRRAHTVGLRNPTREAVG*QLGGVG
Trigger: TCCTACCCCTCCAAGCTGGCAGCCCACCGCCTCACG...GGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR GCA 90 bp GTCCATGGTTTGAGATCTCCCCAAAGCAGGGGAGCAAAGAGTTCCTCGGGCTTCAGCTGGGGCTGCGGCTaGTCTATGCTGGTCAGTCCG +
Preference number: 4 (lower is better)
Translates to: VHGLRSPQSRGAKSSSGFSWGCG*SMLVSP
Trigger: CGGACTGACCAGCATAGAGCAGCCGCAGCCCCAGCT...GAAGCCCGAGGAACTCTTTGCTCCCCTGCTTTGGGGAGATCTCAAACCATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp GGGAGAAGCAGAGCCAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTGAGATCAAGGAGCTGGGGCTaGGGCTGCTCTATGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GRSRASAVKPQLHVHGLRSRSWG*GCSMLV
Trigger: GACCAGCATAGAGCAGCCGCAGCCCCAGCTCCTTGA...TCTCAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTGGCTCTGCTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp ACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGGCGGCAGAAGGGCTCGCTCCAGCATCTTaGTGGCACAGGAACCCGGCT +
Preference number: 4 (lower is better)
Translates to: TVGLRNPTSYWLGLAAEGLAPAS*WHRNPA
Trigger: AGCCGGGTTCCTGTGCCAGCAAGATGCTGGAGCGAG...CCCTTCTGCCGCCAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS-3UTR CCA 90 bp CTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACAGTCTGGGCATGGGTaGGGTCGGGCGCCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: LCQLSGRGELIQSVLEIPQSGHG*GRAPPC
Trigger: ACACGGAGGCGCCCGACCCCACCCATGCCCAGACTG...TGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR GCA 90 bp GGGGAGCAAAGAGTTCCTCGGGCTTCTGAGCTCGAGCCCAGTATAAATGGCCAAGAGGGCCAGGGGAGTTaGCCTCAGAGAGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GEQRVPRASELEPSINGQEGQGS*PQREGN
Trigger: GTTTCCCTCTCTCTGAGGGCAACTCCCCTGGCCCTC...TTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGGAACTCTTTGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp CTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACTGGAGCTGACTGGCTaGGCTTCTGCGGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LCQLSGRGELIQSVLEIPLELTG*ASAVGP
Trigger: AGGGCCCACCGCAGAAGCCCAGCCAGTCAGCTCCAG...TGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp CCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCGGTGCGTGGCCAGCTTaGACGGGTACGAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PLPAIWKRRAHTVGLRNPGAWPA*TGTRRP
Trigger: AGGCCTTCTCGTACCCGTCCAAGCTGGCCACGCACC...GGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp AGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGGTGCTAAGCGGTGCGTaGCCAGCTTGGACGGGTACG +
Preference number: 4 (lower is better)
Translates to: RRAHTVGLRNPTSYWLGLVLSGA*PAWTGT
Trigger: CGTACCCGTCCAAGCTGGCCACGCACCGCTTAGCAC...CAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp TTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTAGCAGAGGGGCAGTCTGGGCATaGGTGGGGTCGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LTREPVCPQSSSTHDSSRGAVWA*VGSGAS
Trigger: GGAGGCGCCCGACCCCACCCATGCCCAGACTGCCCC...TCTGCTACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp CCACAGCTCCACGTCCATGGTTTGAGATCTCCCCAAAGCAGGGGAGCAAAGAGTGGTAGGAGAAGGCCTTaGGGCAGTCTGGGCATGGGT +
Preference number: 4 (lower is better)
Translates to: PQLHVHGLRSPQSRGAKSGRRRP*GSLGMG
Trigger: ACCCATGCCCAGACTGCCCCAAGGCCTTCTCCTACC...ACTCTTTGCTCCCCTGCTTTGGGGAGATCTCAAACCATGGACGTGGAGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp TGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTCTGGCCAAAGGCCTaGCCGCAGCTGGAGCATCGG +
Preference number: 4 (lower is better)
Translates to: CQLSGRGELIQSVLEIPPLWPKA*PQLEHR
Trigger: CCGATGCTCCAGCTGCGGCCAGGCCTTTGGCCAGAG...AGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp GTCCATGGTTTGAGATCTCCCCAAAGCAGGGGAGCAAAGAGTTCCTCGGGCTTCCACCATAAACCCAGGTaGGGCACTGGGGCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VHGLRSPQSRGAKSSSGFHHKPR*GTGARG
Trigger: GCCTCTTGCCCCAGTGCCCCACCTGGGTTTATGGTG...GAAGCCCGAGGAACTCTTTGCTCCCCTGCTTTGGGGAGATCTCAAACCATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp GTCCATGGTTTGAGATCTCCCCAAAGCAGGGGAGCAAAGAGTTCCTCGGGCTTCGGGATCCTGAGTCCTTaGGGAGGAGGGACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VHGLRSPQSRGAKSSSGFGILSP*GGGTSG
Trigger: TCCTGAGGTCCCTCCTCCCCAAGGACTCAGGATCCC...GAAGCCCGAGGAACTCTTTGCTCCCCTGCTTTGGGGAGATCTCAAACCATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp GGGGAGCAAAGAGTTCCTCGGGCTTCTGAGCTCGAGCCCAGTATAAATGGCCAAAAGGGAAGAGGGGACTaGGGGCCTGGGATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GEQRVPRASELEPSINGQKGRGD*GPGILS
Trigger: ACTCAGGATCCCAGGCCCCCAGTCCCCTCTTCCCTT...TTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGGAACTCTTTGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp GGGGAGAAGCAGAGCCAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTGAGGGGTCCCCAAGAGGGTaGTGGCCTGGACTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: GEKQSQRCQTTAPRPWFEGSPRG*WPGLLK
Trigger: TTTAAGAAGTCCAGGCCACCACCCTCTTGGGGACCC...CTCAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTGGCTCTGCTTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp GTGGGGAGAAGCAGAGCCAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTGCAGGACCTGGGTTTCTaGCCCCTGAGCTCATATTTC +
Preference number: 4 (lower is better)
Translates to: VGRSRASAVKPQLHVHGLQDLGF*PLSSYF
Trigger: GAAATATGAGCTCAGGGGTCAGAAACCCAGGTCCTG...CAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTGGCTCTGCTTCTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp AGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGTCTCTCTCCCCCTTGTaGTCCACCTGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RRAHTVGLRNPTSYWLGLSLSPL*STWWWL
Trigger: CAGCCACCACCAGGTGGAGCACAAGGGGGAGAGAGA...CAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR GCA 90 bp CCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTGCTGCGGCTGCTCTATaGTGGTCAGTCCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: PAIWKRRAHTVGLRNPTSAAAAL*WSVRGP
Trigger: TGGTCCCCGGACTGACCAGCATAGAGCAGCCGCAGC...AGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp ACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGGCGGCAGAAGGGGGTGGGGAGCTTCTTTaGTCACTGGTTCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: TVGLRNPTSYWLGLAAEGGGELL*SLVPCQ
Trigger: CTGGCAAGGAACCAGTGACCAAAGAAGCTCCCCACC...CCCTTCTGCCGCCAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp TCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCGGTGCGTGGCCAGCTTaGACGGGTACGAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SGRGELIQSVLEIPPLTGGAWPA*TGTRRP
Trigger: AGGCCTTCTCGTACCCGTCCAAGCTGGCCACGCACC...GCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp CTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCGGTAGGAGAAGGCCTTaGGGCAGTCTGGGCATGGGT +
Preference number: 4 (lower is better)
Translates to: LPAIWKRRAHTVGLRNPTGRRRP*GSLGMG
Trigger: ACCCATGCCCAGACTGCCCCAAGGCCTTCTCCTACC...GGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp TGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATGGTGGGCTGCCAGCTTaGAGGGGTAGGAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CPLPAIWKRRAHTVGLRNGGLPA*RGRRRP
Trigger: AGGCCTTCTCCTACCCCTCCAAGCTGGCAGCCCACC...ATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp GGGAGAAGCAGAGCCAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTGAGAGATGGGCGGCCAGCTTaGAGGGAAATGAGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GRSRASAVKPQLHVHGLRDGRPA*REMRKP
Trigger: AGGCTTTCTCATTTCCCTCCAAGCTGGCCGCCCATC...TCTCAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTGGCTCTGCTTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp CCTCGGGCTTCTGAGCTCGAGCCCAGTATAAATGGCCAATCCCTTGCCCTGCCCAAGTTGATTAGGGGCTaGAATTCTGAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PRASELEPSINGQSLALPKLIRG*NSEGRA
Trigger: AGCCCTGCCCTCAGAATTCCAGCCCCTAATCAACTT...GGGCAGGGCAAGGGATTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp AGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGCTCGCTCCAGCATCTTaGTGGCACAGGAACCTAGGG +
Preference number: 4 (lower is better)
Translates to: RRAHTVGLRNPTSYWLGLLAPAS*WHRNLG
Trigger: CCCTAGGTTCCTGTGCCAGCAAGATGCTGGAGCGAG...CAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp CCTGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAACCACCTGGTGGTGGCTaGGTTGATGAAGGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: PALCQLSGRGELIQSVLEPPGGG*VDEGAV
Trigger: TACTGCTCCTTCATCAACGCAGCCACCACCAGGTGG...TTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR GCA 90 bp CCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCGTTTCCGGCCAGAATTaGAACCAGGCCGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PLPAIWKRRAHTVGLRNPVSGQN*NQAEGG
Trigger: CCCTCCTTCGGCCTGGTTGCAATTCTGGCCGGAAAC...GGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp CCTGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAGTGATACCCCGTATCTaGTGGGTGACAGAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PALCQLSGRGELIQSVLEVIPRI*WVTESP
Trigger: GGGACTCTCTGTCACCCAGCAGATACGGGGTATCAC...TTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp TCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTGCGGTGGGCCCTGGTaGGGAGCTTCTTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: SGRGELIQSVLEIPPLTGCGGPW*GASLVT
Trigger: AGTGACCAAAGAAGCTCCCCACCAGGGCCCACCGCA...GCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp CCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTTCTGCGGTGGGCCCTaGTGGGGAGCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: PAIWKRRAHTVGLRNPTSFCGGP*WGASLV
Trigger: GACCAAAGAAGCTCCCCACCAGGGCCCACCGCAGAA...AGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp TGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATAGCAGTAAGCGTCTCTaGCCAAAGGCCTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: CPLPAIWKRRAHTVGLRNSSKRL*PKAWPQ
Trigger: CTGCGGCCAGGCCTTTGGCCAGAGACGCTTACTGCT...ATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp TGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTGCGGCTGCTCTATGCTaGTCAGTCCGGGGACCAAAC +
Preference number: 4 (lower is better)
Translates to: CQLSGRGELIQSVLEIPPAAALC*SVRGPN
Trigger: GTTTGGTCCCCGGACTGACCAGCATAGAGCAGCCGC...AGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp CCTGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAACAGCTTGGAGGGAAATaGGAAAGCCTTGGGGCAATG +
Preference number: 4 (lower is better)
Translates to: PALCQLSGRGELIQSVLEQLGGK*ESLGAM
Trigger: CATTGCCCCAAGGCTTTCTCATTTCCCTCCAAGCTG...TTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR TCA 90 bp CCACAGCTCCACGTCCATGGTTTGAGATCTCCCCAAAGCAGGGGAGCAAAGAGTAGTTCCTCGGGCTTCTaGGCTCGAGCCCAGTATAAA +
Preference number: 4 (lower is better)
Translates to: PQLHVHGLRSPQSRGAKSSSSGF*ARAQYK
Trigger: TTTATACTGGGCTCGAGCTCAGAAGCCCGAGGAACT...ACTCTTTGCTCCCCTGCTTTGGGGAGATCTCAAACCATGGACGTGGAGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp TCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCGCTCCAGCATCTTGCTaGCACAGGAACCTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SGRGELIQSVLEIPPLTGAPASC*HRNLGA
Trigger: TGCCCCTAGGTTCCTGTGCCAGCAAGATGCTGGAGC...GCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp GTCATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGAGAGCCTGTTTGCCAGGCAGTCGCCTaGCTGCCGGGCGCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: VIWPKWRHQFKLLTREPVCQAVA*LPGAVG
Trigger: CCCAACCGCGCCCGGCAGCCAGGCGACTGCCTGGCA...AACAGGCTCTCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp AGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGCGAGCCCAGTATAAATaGCCAATCCCTTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RRAHTVGLRNPTSYWLGLRAQYK*PIPCPA
Trigger: GGCAGGGCAAGGGATTGGCCATTTATACTGGGCTCG...CAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp TCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTTAGTCTCAGTTCATTaGCGCCGCGTCAACTGCGCC +
Preference number: 4 (lower is better)
Translates to: SGRGELIQSVLEIPPLTGLVSVH*RRVNCA
Trigger: GGCGCAGTTGACGCGGCGTCAATGAACTGAGACTAA...GCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS-3UTR GCA 90 bp TCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCGACCCAGTCCTGTCTTaGGGAAACCTCCGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SGRGELIQSVLEIPPLTGDPVLS*GNLRLR
Trigger: CCTCAAACGGAGGTTTCCGCAAGACAGGACTGGGTC...GCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp TTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTAGCAGAGTGCTAAGCGGTGCGTaGCCAGCTTGGACGGGTACG +
Preference number: 4 (lower is better)
Translates to: LTREPVCPQSSSTHDSSRVLSGA*PAWTGT
Trigger: CGTACCCGTCCAAGCTGGCCACGCACCGCTTAGCAC...TCTGCTACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp TGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTGATGGGCGGCCAGCTTaGAGGGAAATGAGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: CQLSGRGELIQSVLEIPPDGRPA*REMRKP
Trigger: AGGCTTTCTCATTTCCCTCCAAGCTGGCCGCCCATC...AGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp CCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTAATCCCACCTCTTACTaGCTAGGGCTGGCGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PAIWKRRAHTVGLRNPTSNPTSY*LGLAAE
Trigger: TTCTGCCGCCAGCCCTAGCCAGTAAGAGGTGGGATT...AGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CCA 90 bp TGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATGCTCCAGCATCTTGCTaGCACAGGAACCCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: CPLPAIWKRRAHTVGLRNAPASC*HRNPAF
Trigger: AAAAGCCGGGTTCCTGTGCCAGCAAGATGCTGGAGC...ATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS-3UTR TCA 90 bp ATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGAGAGCCTGTTTGCGCTTCGGGCGCTTCGTaGGTTGGGTGCTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: IWPKWRHQFKLLTREPVCASGAS*VGCWVP
Trigger: GGGGACCCAGCACCCAACTCACGAAGCGCCCGAAGC...GCAAACAGGCTCTCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp GTCATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGAGAGCCTGTTGACTGGCTGGGCTTCTaGGGTGGGCCCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VIWPKWRHQFKLLTREPVDWLGF*GGPWWG
Trigger: TCCCCACCAGGGCCCACCGCAGAAGCCCAGCCAGTC...AACAGGCTCTCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp TTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTAGCAGATCTCTCTCCCCCTTGTaGTCCACCTGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LTREPVCPQSSSTHDSSRSLSPL*STWWWL
Trigger: CAGCCACCACCAGGTGGAGCACAAGGGGGAGAGAGA...TCTGCTACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp CCTCGGGCTTCTGAGCTCGAGCCCAGTATAAATGGCCAATCCCTTGCCCTGCCCAAGTCTAAAGGTTCCTaGCTTCCTCACTTTATTTGC +
Preference number: 4 (lower is better)
Translates to: PRASELEPSINGQSLALPKSKGS*LPHFIC
Trigger: GCAAATAAAGTGAGGAAGGCAGGAACCTTTAGACTT...GGGCAGGGCAAGGGATTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp CAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTGAGATCTCCCCAAAGCAGACAAGAGAGCCTGTTTaGCCACAATCCTCATCAACC +
Preference number: 4 (lower is better)
Translates to: QRCQTTAPRPWFEISPKQTREPV*PQSSST
Trigger: GGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGT...CTGCTTTGGGGAGATCTCAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp TGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATATTTCATCCCTGGCTTaGATGGGGCCGTGGAGGATA +
Preference number: 4 (lower is better)
Translates to: CPLPAIWKRRAHTVGLRNISSLA*MGPWRI
Trigger: TATCCTCCACGGCCCCATCCAAGCCAGGGATGAAAT...ATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS-3UTR CCA 90 bp AGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGGTTAAATTTCATCCCTaGCTTGGATGGGGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: RRAHTVGLRNPTSYWLGLVKFHP*LGWGRG
Trigger: TCCACGGCCCCATCCAAGCCAGGGATGAAATTTAAC...CAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS-3UTR CCA 90 bp CTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTGCCAGCTATCTaGAAGAGGCGAGCTCATACA +
Preference number: 4 (lower is better)
Translates to: LCQLSGRGELIQSVLEIPPLPAI*KRRAHT
Trigger: TGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGG...TGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR TCA 90 bp GCATGTATGTATTTTCAATTTCTTAGATACCGTCATATGGCCAAAGTGGAGACAGCGTGGGTCCAGAGGTaGGCCGCCAGCTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: ACMYFQFLRYRHMAKVETAWVQR*AASLER
Trigger: CCGCTCCAAGCTGGCGGCTCACCTCTGGACCCACGC...TGTCTCCACTTTGGCCATATGACGGTATCTAAGAAATTGAAAATACATACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp TTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTAGCAGAGCGGAAACCTCCGTTTaGGGAAGGAGCATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LTREPVCPQSSSTHDSSRAETSV*GRSIWV
Trigger: CACCCAGATGCTCCTTCCTCAAACGGAGGTTTCCGC...TCTGCTACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp AGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGCAGGAACCCGGCTTTTaGCTTAGTCTCAGTTCATTG +
Preference number: 4 (lower is better)
Translates to: RRAHTVGLRNPTSYWLGLQEPGF*LSLSSL
Trigger: CAATGAACTGAGACTAAGTCAAAAGCCGGGTTCCTG...CAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS-3UTR GCA 90 bp TGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCGCCTCCTTAAATCTTaGACCAACAGCCTCACCCTA +
Preference number: 4 (lower is better)
Translates to: CPLPAIWKRRAHTVGLRNRLLKS*TNSLTL
Trigger: TAGGGTGAGGCTGTTGGTGCAAGATTTAAGGAGGCG...ATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp TTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTAGCAGATCAGGGTCCTGTAAGTaGAGGGTCCGCACCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LTREPVCPQSSSTHDSSRSGSCK*RVRTCE
Trigger: CTCACAGGTGCGGACCCTGCACTTACAGGACCCTGA...TCTGCTACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp ACCGTCATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGAGAGCCTGGTGGGCTGCCAGCTTaGAGGGGTAGGAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: TVIWPKWRHQFKLLTREPGGLPA*RGRRRP
Trigger: AGGCCTTCTCCTACCCCTCCAAGCTGGCAGCCCACC...AGGCTCTCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATATGACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp ATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGAGAGCCTGTTTGCGGATCCCAGCGGGGCTaGGCTGCAGCGTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: IWPKWRHQFKLLTREPVCGSQRG*AAASVE
Trigger: TTCCACTGACGCTGCAGCCCAGCCCCGCTGGGATCC...GCAAACAGGCTCTCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp CCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTACAGCTCCACGTCCATaGTTTGAGATCTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PAIWKRRAHTVGLRNPTSTAPRP*FEISPK
Trigger: CTTTGGGGAGATCTCAAACCATGGACGTGGAGCTGT...AGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp CTTTTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTAGCTCCACGTCCATGGTTTaGGATCTCCCCAAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLTREPVCPQSSSTHDSSSTSMV*DLPKAG
Trigger: CCCTGCTTTGGGGAGATCTCAAACCATGGACGTGGA...GCTACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp CTTTTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTAGCGGTGGGGAGCTTCTTTaGTCACTGGTTCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LLTREPVCPQSSSTHDSSGGELL*SLVPCQ
Trigger: CTGGCAAGGAACCAGTGACCAAAGAAGCTCCCCACC...GCTACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp GCATGTATGTATTTTCAATTTCTTAGATACCGTCATATGGCCAAAGTGGAGACACAGTCTGGGCATGGGTaGGGTCGGGCGCCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: ACMYFQFLRYRHMAKVETQSGHG*GRAPPC
Trigger: ACACGGAGGCGCCCGACCCCACCCATGCCCAGACTG...TGTCTCCACTTTGGCCATATGACGGTATCTAAGAAATTGAAAATACATACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp TTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTAGCAGATGGGTTTCTGACCCCTaGGCTCATATTTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LTREPVCPQSSSTHDSSRWVSDP*AHISGR
Trigger: CCTCCCAGAAATATGAGCTCAGGGGTCAGAAACCCA...TCTGCTACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp TTAGATACCGTCATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGACTGGAGCTGACTGGCTaGGCTTCTGCGGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LDTVIWPKWRHQFKLLTRLELTG*ASAVGP
Trigger: AGGGCCCACCGCAGAAGCCCAGCCAGTCAGCTCCAG...TCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATATGACGGTATCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp CCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTCATCTCCATAAAAGTTaGTTAGGGGCTGGAATTCTG +
Preference number: 4 (lower is better)
Translates to: PAIWKRRAHTVGLRNPTSHLHKS*LGAGIL
Trigger: CAGAATTCCAGCCCCTAATCAACTTTTATGGAGATG...AGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp TTAGATACCGTCATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGACCCGGGAGGCCGTTCTaGTCGACCCAGTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LDTVIWPKWRHQFKLLTRPGRPF*STQSWK
Trigger: TTTCCAGGACTGGGTCGATCAGAACGGCCTCCCGGG...TCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATATGACGGTATCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp AAACTTTTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTCCACCTGGTGGTGGCTaGGTTGATGAAGGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: KLLTREPVCPQSSSTHDSPPGGG*VDEGAV
Trigger: TACTGCTCCTTCATCAACGCAGCCACCACCAGGTGG...ACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp TTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTAGCAGACTTCCTCACTTTATTTaGCACAGGCACCAGCGGGTT +
Preference number: 4 (lower is better)
Translates to: LTREPVCPQSSSTHDSSRLPHFI*HRHQRV
Trigger: AACCCGCTGGTGCCTGTGGCAAATAAAGTGAGGAAG...TCTGCTACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp AAACTTTTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTAAATGGCCAATCCCTTaGCCTGCCCTCTGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: KLLTREPVCPQSSSTHDSKWPIP*PALCQL
Trigger: TAGCTGGCAGAGGGCAGGGCAAGGGATTGGCCATTT...ACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp CCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTCAGACTTTTTACCTTTaGCATGTAAGTGTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PAIWKRRAHTVGLRNPTSQTFYL*HVSVWG
Trigger: TCCCCACACACTTACATGGCAAAGGTAAAAAGTCTG...AGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp TGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTAGTTCATGTCTGCAATaGGCTATGATTGTGTTACTG +
Preference number: 4 (lower is better)
Translates to: CQLSGRGELIQSVLEIPPSSCLQ*AMIVLL
Trigger: CAGTAACACAATCATAGCTCATTGCAGACATGAACT...AGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp TTAGATACCGTCATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGACCTTGCCCTGCCCTCTaGCAGCTATCTGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LDTVIWPKWRHQFKLLTRPCPAL*QLSGRG
Trigger: GCCTCTTCCAGATAGCTGGCAGAGGGCAGGGCAAGG...TCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATATGACGGTATCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp TTAGATACCGTCATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGATGCGGTGGGCCCTGGTaGGGAGCTTCTTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: LDTVIWPKWRHQFKLLTRCGGPW*GASLVT
Trigger: AGTGACCAAAGAAGCTCCCCACCAGGGCCCACCGCA...TCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATATGACGGTATCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp GCATGTATGTATTTTCAATTTCTTAGATACCGTCATATGGCCAAAGTGGAGACATTCTGCGGTGGGCCCTaGTGGGGAGCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: ACMYFQFLRYRHMAKVETFCGGP*WGASLV
Trigger: GACCAAAGAAGCTCCCCACCAGGGCCCACCGCAGAA...TGTCTCCACTTTGGCCATATGACGGTATCTAAGAAATTGAAAATACATACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp GTCATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGAGAGCCTGTTTTAGGGGCAGCCCTTTaGCCTGGCATGCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: VIWPKWRHQFKLLTREPVLGAAL*PGMHLH
Trigger: ATGGAGATGCATGCCAGGCCAAAGGGCTGCCCCTAA...AACAGGCTCTCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp AGACAAGCATGTATGTATTTTCAATTTCTTAGATACCGTCATATGGCCAAAGTGGGGCGCTTCGTGAGTTaGGTGCTGGGTCCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RQACMYFQFLRYRHMAKVGRFVS*VLGPQE
Trigger: CTCTTGGGGACCCAGCACCCAACTCACGAAGCGCCC...CACTTTGGCCATATGACGGTATCTAAGAAATTGAAAATACATACATGCTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp ATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGAGAGCCTGTTTGCCAGCTTGGAGGGAAATaGGAAAGCCTTGGGGCAATG +
Preference number: 4 (lower is better)
Translates to: IWPKWRHQFKLLTREPVCQLGGK*ESLGAM
Trigger: CATTGCCCCAAGGCTTTCTCATTTCCCTCCAAGCTG...GCAAACAGGCTCTCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp CAACCCACGATAGTAGCAGACTTTTTACCTTTGCCATGTAAGTGTGTGGGGAGACCCTTTGGCCTGGCATaGATCTCCATAAAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: QPTIVADFLPLPCKCVGRPFGLA*ISIKVD
Trigger: ATCAACTTTTATGGAGATGCATGCCAGGCCAAAGGG...TCTCCCCACACACTTACATGGCAAAGGTAAAAAGTCTGCTACTATCGTGGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp AAGCATGTATGTATTTTCAATTTCTTAGATACCGTCATATGGCCAAAGTGGAGAAGCAGTAAGCGTCTCTaGCCAAAGGCCTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: KHVCIFNFLDTVIWPKWRSSKRL*PKAWPQ
Trigger: CTGCGGCCAGGCCTTTGGCCAGAGACGCTTACTGCT...TCTCCACTTTGGCCATATGACGGTATCTAAGAAATTGAAAATACATACATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp GCATGTATGTATTTTCAATTTCTTAGATACCGTCATATGGCCAAAGTGGAGACAATACCCCGTATCTGCTaGGTGACAGAGAGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: ACMYFQFLRYRHMAKVETIPRIC*VTESPG
Trigger: CCCGGGACTCTCTGTCACCCAGCAGATACGGGGTAT...TGTCTCCACTTTGGCCATATGACGGTATCTAAGAAATTGAAAATACATACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp ATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGAGAGCCTGTTTGCCCTCTGCCAGCTATCTaGAAGAGGCGAGCTCATACA +
Preference number: 4 (lower is better)
Translates to: IWPKWRHQFKLLTREPVCPLPAI*KRRAHT
Trigger: TGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGG...GCAAACAGGCTCTCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR GCA 90 bp AGACAAGCATGTATGTATTTTCAATTTCTTAGATACCGTCATATGGCCAAAGTGAACAGCGCCTCGGGATaGCCAGCTGATCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RQACMYFQFLRYRHMAKVNSASG*PADQGA
Trigger: AGCTCCTTGATCAGCTGGGCATCCCGAGGCGCTGTT...CACTTTGGCCATATGACGGTATCTAAGAAATTGAAAATACATACATGCTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CCA 90 bp AGACAAGCATGTATGTATTTTCAATTTCTTAGATACCGTCATATGGCCAAAGTGAATCCCACCTCTTACTaGCTAGGGCTGGCGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RQACMYFQFLRYRHMAKVNPTSY*LGLAAE
Trigger: TTCTGCCGCCAGCCCTAGCCAGTAAGAGGTGGGATT...CACTTTGGCCATATGACGGTATCTAAGAAATTGAAAATACATACATGCTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR TCA 90 bp TTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTAGCAGATACAAGTGGAAGAGTTaGGACAAGCATGTATGTATT +
Preference number: 4 (lower is better)
Translates to: LTREPVCPQSSSTHDSSRYKWKS*DKHVCI
Trigger: AATACATACATGCTTGTCTCAACTCTTCCACTTGTA...TCTGCTACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS GCA 90 bp GCAGCCGCTGTCGCCGCTGCTGCACTGCCCTCGGACCAGCGGAGCTaGCCCGCCCGGCGCGCGTCCGGCGTCGGGGGAGGGCAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: AAAVAAAALPSDQRS*PARRASGVGGGQAR
Trigger: CCTTGCCTGCCCTCCCCCGACGCCGGACGCGCGCCGGGCGGGGCAGCTCCGCTGGTCCGAGGGCAGTGCAGCAGCGGCGACAGCGGCTGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314228.9
CDS GCA 90 bp CGCGTCCGGCGTCGGGGGAGGGCAGGCAAGGGAGCGCGCGCAAGCTaGTTAGCCCAACCTCATTTCCATCCCCTCCTCCCACGCTGGACC +
Preference number: 5 (lower is better)
Translates to: RVRRRGRAGKGARAS*LAQPHFHPLLPRWT
Trigger: GGTCCAGCGTGGGAGGAGGGGATGGAAATGAGGTTGGGCTAAGCAGCTTGCGCGCGCTCCCTTGCCTGCCCTCCCCCGACGCCGGACGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314228.9
CDS CCA 90 bp GATGAAGGAGCAGTAAGCGTCTCTGGCCAAAGGCCTGGCCGCAGCTaGAGCATCGGTGCCAGGCAGTCGCCTGGCTGCCGGGCGCGGTTG +
Preference number: 5 (lower is better)
Translates to: DEGAVSVSGQRPGRS*SIGARQSPGCRARL
Trigger: CAACCGCGCCCGGCAGCCAGGCGACTGCCTGGCACCGATGCTCCAGCTGCGGCCAGGCCTTTGGCCAGAGACGCTTACTGCTCCTTCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314228.9
ENST00000458714.2
ENST00000601282.1
CDS CCA 90 bp GCAAGCTGCTTAGCCCAACCTCATTTCCATCCCCTCCTCCCACGCTaGACCAAAGGGGGCGTCAGAAAGCATGCGCAGTGCGGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: ASCLAQPHFHPLLPR*TKGGVRKHAQCGLA
Trigger: TGCCAGCCCGCACTGCGCATGCTTTCTGACGCCCCCTTTGGTCCAGCGTGGGAGGAGGGGATGGAAATGAGGTTGGGCTAAGCAGCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314228.9
CDS CCA 90 bp CCGCTTCGGGCGCTTCGTGAGTTGGGTGCTGGGTCCCCAAGAGGGTaGTGGCCTGGACTTCTTAAACTTAAGGGAAGAGGGGACTGGGGG +
Preference number: 5 (lower is better)
Translates to: PLRALRELGAGSPRG*WPGLLKLKGRGDWG
Trigger: CCCCCAGTCCCCTCTTCCCTTAAGTTTAAGAAGTCCAGGCCACCACCCTCTTGGGGACCCAGCACCCAACTCACGAAGCGCCCGAAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp CCCAAAGCAGGGGAGCAAAGAGTTCCTCGGGCTTCTGAGCTCGAGCCCAGTATACGGTGCGTGGCCAGCTaGGACGGGTACGAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: PKAGEQRVPRASELEPSIRCVAS*DGYEKA
Trigger: GGCCTTCTCGTACCCGTCCAAGCTGGCCACGCACCG...TATACTGGGCTCGAGCTCAGAAGCCCGAGGAACTCTTTGCTCCCCTGCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS GCA 90 bp CCTCACTTTATTTGCCACAGGCACCAGCGGGTTTCCGGCCAGAATTaGAACCAGGCCGAAGGAGGGAGGGCCAGGGGAGTTGCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: PHFICHRHQRVSGQN*NQAEGGRARGVALR
Trigger: TCTGAGGGCAACTCCCCTGGCCCTCCCTCCTTCGGCCTGGTTGCAATTCTGGCCGGAAACCCGCTGGTGCCTGTGGCAAATAAAGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS CCA 90 bp TGGATCCCAGCGGGGCTGGGCTGCAGCGTCAGTGGAATGGGAAGCTaGGGCCCAGAACTCCTGAGTACATTGAGGATGGAGACTCCATCC +
Preference number: 5 (lower is better)
Translates to: WIPAGLGCSVSGMGS*GPELLSTLRMETPS
Trigger: GGATGGAGTCTCCATCCTCAATGTACTCAGGAGTTCTGGGCCCCAGCTTCCCATTCCACTGACGCTGCAGCCCAGCCCCGCTGGGATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS TCA 90 bp CTGAGTACATTGAGGATGGAGACTCCATCCGCTTCGGGCGCTTCGTaGGTTGGGTGCTGGGTCCCCAAGAGGGTGGTGGCCTGGACTTCT +
Preference number: 5 (lower is better)
Translates to: LSTLRMETPSASGAS*VGCWVPKRVVAWTS
Trigger: AGAAGTCCAGGCCACCACCCTCTTGGGGACCCAGCACCCAACTCACGAAGCGCCCGAAGCGGATGGAGTCTCCATCCTCAATGTACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp CTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCCGGTGCGTGGCCAGCTaGGACGGGTACGAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LPAIWKRRAHTVGLRNPTRCVAS*DGYEKA
Trigger: GGCCTTCTCGTACCCGTCCAAGCTGGCCACGCACCG...GGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CAA 90 bp GTGGGGAGAAGCAGAGCCAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTGGGTTTCCGGCCAGAATaGCAACCAGGCCGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: VGRSRASAVKPQLHVHGLGFRPE*QPGRRR
Trigger: CCTCCTTCGGCCTGGTTGCAATTCTGGCCGGAAACC...CAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTGGCTCTGCTTCTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp CCTCGGGCTTCTGAGCTCGAGCCCAGTATAAATGGCCAATCCCTTGCCCTGCCCCTGATGGGGATAGGGTaGGAGGGCCCAGGAGTTCAT +
Preference number: 5 (lower is better)
Translates to: PRASELEPSINGQSLALPLMGIG*EGPGVH
Trigger: ATGAACTCCTGGGCCCTCCAACCCTATCCCCATCAG...GGGCAGGGCAAGGGATTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS GCA 90 bp GTAAGTGCAGGGTCCGCACCTGTGAGTGAGCGCCTCCTTAAATCTTaGACCAACAGCCTCACCCTAGTCCTAGCCCTGCCGTTGCCTCAC +
Preference number: 5 (lower is better)
Translates to: VSAGSAPVSERLLKS*TNSLTLVLALPLPH
Trigger: GTGAGGCAACGGCAGGGCTAGGACTAGGGTGAGGCTGTTGGTGCAAGATTTAAGGAGGCGCTCACTCACAGGTGCGGACCCTGCACTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp CTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCGGGTACGAGAAGGCCTaGTCACAGTCGGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: LPAIWKRRAHTVGLRNPTGYEKA*SQSGQR
Trigger: CCGCTGCCCCGACTGTGACAAGGCCTTCTCGTACCC...GGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CAA 90 bp CCTGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAACAGTCTCTCTCCCCCTaGTGCTCCACCTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: PALCQLSGRGELIQSVLEQSLSP*CSTWWW
Trigger: CCACCACCAGGTGGAGCACAAGGGGGAGAGAGACTG...TTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CAA 90 bp GGGAGAAGCAGAGCCAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTGAGACTTAGGGGCAGCCCTTaGGCCTGGCATGCATCTCCA +
Preference number: 5 (lower is better)
Translates to: GRSRASAVKPQLHVHGLRLRGSP*AWHASP
Trigger: TGGAGATGCATGCCAGGCCAAAGGGCTGCCCCTAAG...TCTCAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTGGCTCTGCTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp GGGGAGCAAAGAGTTCCTCGGGCTTCTGAGCTCGAGCCCAGTATAAATGGCCAATGGGATCCTGAGTCCTaGGGGAGGAGGGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: GEQRVPRASELEPSINGQWDPES*GRRDLR
Trigger: CCTGAGGTCCCTCCTCCCCAAGGACTCAGGATCCCA...TTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGGAACTCTTTGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS GCA 90 bp GTCCTAGCCCTGCCGTTGCCTCACACTGGGAAGTCTAAAGGTTCCTaGCTTCCTCACTTTATTTGCCACAGGCACCAGCGGGTTTCCGGC +
Preference number: 5 (lower is better)
Translates to: VLALPLPHTGKSKGS*LPHFICHRHQRVSG
Trigger: GCCGGAAACCCGCTGGTGCCTGTGGCAAATAAAGTGAGGAAGGCAGGAACCTTTAGACTTCCCAGTGTGAGGCAACGGCAGGGCTAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS CCA 90 bp TACATTGAGGATGGAGACTCCATCCGCTTCGGGCGCTTCGTGAGTTaGGTGCTGGGTCCCCAAGAGGGTGGTGGCCTGGACTTCTTAAAC +
Preference number: 5 (lower is better)
Translates to: YIEDGDSIRFGRFVS*VLGPQEGGGLDFLN
Trigger: GTTTAAGAAGTCCAGGCCACCACCCTCTTGGGGACCCAGCACCCAACTCACGAAGCGCCCGAAGCGGATGGAGTCTCCATCCTCAATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp GGGGAGCAAAGAGTTCCTCGGGCTTCTGAGCTCGAGCCCAGTATAAATGGCCAACCTCGCTCCAGCATCTaGCTGGCACAGGAACCTAGG +
Preference number: 5 (lower is better)
Translates to: GEQRVPRASELEPSINGQPRSSI*LAQEPR
Trigger: CCTAGGTTCCTGTGCCAGCAAGATGCTGGAGCGAGG...TTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGGAACTCTTTGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp CCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCCAGTCTCTCTCCCCCTaGTGCTCCACCTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: PLPAIWKRRAHTVGLRNPQSLSP*CSTWWW
Trigger: CCACCACCAGGTGGAGCACAAGGGGGAGAGAGACTG...GGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CAA 90 bp TGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCGGGCGCTTCGTGAGTaGGGTGCTGGGTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: CPLPAIWKRRAHTVGLRNRALRE*GAGSPR
Trigger: TCTTGGGGACCCAGCACCCAACTCACGAAGCGCCCG...ATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp TGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCCTCGCTCCAGCATCTaGCTGGCACAGGAACCCGGC +
Preference number: 5 (lower is better)
Translates to: CQLSGRGELIQSVLEIPPPRSSI*LAQEPG
Trigger: GCCGGGTTCCTGTGCCAGCAAGATGCTGGAGCGAGG...AGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS TCA 90 bp ATCTGGGTGCTTAGAACCCGGAGCCCAGGACTAGGAAAAGGACGGTaGGGACCCTGGAGTGCAACATTTAAGGAGGCACTCGCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: IWVLRTRSPGLGKGR*GPWSATFKEALALR
Trigger: CCTGAGAGCGAGTGCCTCCTTAAATGTTGCACTCCAGGGTCCTCACCGTCCTTTTCCTAGTCCTGGGCTCCGGGTTCTAAGCACCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS TCA 90 bp CAGTGGGCGGGGCTTCACGTCGAAGACCTAGCTTTACCCGGCTTTTaGCTTAGTCTCAGTTCATTGACGCCGCGTCAACTGCGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: QWAGLHVEDLALPGF*LSLSSLTPRQLRPS
Trigger: AGAAGGGCGCAGTTGACGCGGCGTCAATGAACTGAGACTAAGTCAAAAGCCGGGTAAAGCTAGGTCTTCGACGTGAAGCCCCGCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600154.1
CDS-3UTR CAA 90 bp ACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGGCGGCAGAAGGGAATTTCATCCCTGGCTaGGATGGGGCCGTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: TVGLRNPTSYWLGLAAEGNFIPG*DGAVED
Trigger: ATCCTCCACGGCCCCATCCAAGCCAGGGATGAAATT...CCCTTCTGCCGCCAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS-3UTR CAA 90 bp GGGAGAAGCAGAGCCAGCGCTGTCAAACCACAGCTCCACGTCCATGGTTTGAGATTGGTCACTGGTTCCTaGCCAGTGGGACTAGGATCG +
Preference number: 5 (lower is better)
Translates to: GRSRASAVKPQLHVHGLRLVTGS*PVGLGS
Trigger: CGATCCTAGTCCCACTGGCAAGGAACCAGTGACCAA...TCTCAAACCATGGACGTGGAGCTGTGGTTTGACAGCGCTGGCTCTGCTTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp ACTTTTTACCTTTGCCATGTAAGTGTGTGGGGAGAAGCAGAGCCAGCGCTGTCAGGGTACGAGAAGGCCTaGTCACAGTCGGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: TFYLCHVSVWGEAEPALSGYEKA*SQSGQR
Trigger: CCGCTGCCCCGACTGTGACAAGGCCTTCTCGTACCC...TGACAGCGCTGGCTCTGCTTCTCCCCACACACTTACATGGCAAAGGTAAAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS TCA 90 bp CTGAGAAGGAAAGAGACCCAGTCCTGTCTTGCGGAAACCTCCGTTTaGGGAAGGAGCATCTGGGTGCTTAGAACCCGGAGCCCAGGACTA +
Preference number: 5 (lower is better)
Translates to: LRRKETQSCLAETSV*GRSIWVLRTRSPGL
Trigger: TAGTCCTGGGCTCCGGGTTCTAAGCACCCAGATGCTCCTTCCTCAAACGGAGGTTTCCGCAAGACAGGACTGGGTCTCTTTCCTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS TCA 90 bp GGGATAGGGTTGGAGGGCCCGGCTTTTGACTTAGTCTCAGTTCATTaGCGCCGCGTCAACTGCGCCCTTCTTGCCGTTAAATTTCATCCC +
Preference number: 5 (lower is better)
Translates to: GIGLEGPAFDLVSVH*RRVNCALLAVKFHP
Trigger: GGGATGAAATTTAACGGCAAGAAGGGCGCAGTTGACGCGGCGTCAATGAACTGAGACTAAGTCAAAAGCCGGGCCCTCCAACCCTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314228.9
CDS-3UTR CAA 90 bp AGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCTAGGGCTGGGAAATGAGAAAGCCTaGGGGCAATGCGGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: RRAHTVGLRNPTSYWLGLGNEKA*GQCGQG
Trigger: TCCTTGCCCGCATTGCCCCAAGGCTTTCTCATTTCC...CAGCCCTAGCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CAA 90 bp CTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCGGAAATGAGAAAGCCTaGGGGCAATGCGGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: LPAIWKRRAHTVGLRNPTGNEKA*GQCGQG
Trigger: TCCTTGCCCGCATTGCCCCAAGGCTTTCTCATTTCC...GGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CAA 90 bp TGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCTTAGTCTCAGTTCATaGACGCCGCGTCAACTGCGC +
Preference number: 5 (lower is better)
Translates to: CPLPAIWKRRAHTVGLRNLSLSS*TPRQLR
Trigger: GCGCAGTTGACGCGGCGTCAATGAACTGAGACTAAG...ATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS-3UTR CAA 90 bp TGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATTGGTGGGGAGCTTCTTaGGTCACTGGTTCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: CPLPAIWKRRAHTVGLRNWWGAS*VTGSLP
Trigger: TGGCAAGGAACCAGTGACCAAAGAAGCTCCCCACCA...ATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458714.2
ENST00000601282.1
CDS-3UTR CAA 90 bp TCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTCTTACTGGCCCTTCCTCACTTTATTaGCCACAGGCACCAGCGGGT +
Preference number: 5 (lower is better)
Translates to: SGRGELIQSVLEIPPLTGPSSLY*PQAPAG
Trigger: ACCCGCTGGTGCCTGTGGCAAATAAAGTGAGGAAGG...GCCAGTAAGAGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp TGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCCCACCTTGCGGAAACCTCCGTTaGAGGAAGGAGCATCTGGGT +
Preference number: 5 (lower is better)
Translates to: CQLSGRGELIQSVLEIPPCGNLR*RKEHLG
Trigger: ACCCAGATGCTCCTTCCTCAAACGGAGGTTTCCGCA...AGGTGGGATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp TGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATCTCCACGTCCATGGTTaGAGATCTCCCCAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: CPLPAIWKRRAHTVGLRNLHVHG*RSPQSR
Trigger: CCTGCTTTGGGGAGATCTCAAACCATGGACGTGGAG...ATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS TCA 90 bp TCTTGCTGGCACAGGAACCCGGCTTTTGACTTAGTCTCAGTTCATTaGCGCCGCGTCAACTGCGCCCTTCTTGCCGTTAAATTTCATCCC +
Preference number: 5 (lower is better)
Translates to: SCWHRNPAFDLVSVH*RRVNCALLAVKFHP
Trigger: GGGATGAAATTTAACGGCAAGAAGGGCGCAGTTGACGCGGCGTCAATGAACTGAGACTAAGTCAAAAGCCGGGTTCCTGTGCCAGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS-3UTR CAA 90 bp GGGGAGCAAAGAGTTCCTCGGGCTTCTGAGCTCGAGCCCAGTATAAATGGCCAAGCAGACTTTTTACCTTaGCCATGTAAGTGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: GEQRVPRASELEPSINGQADFLP*PCKCVG
Trigger: CCCCACACACTTACATGGCAAAGGTAAAAAGTCTGC...TTGGCCATTTATACTGGGCTCGAGCTCAGAAGCCCGAGGAACTCTTTGCTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp GTCCATGGTTTGAGATCTCCCCAAAGCAGGGGAGCAAAGAGTTCCTCGGGCTTCAACAAGAGAGCCTGTTaGCCCACAATCCTCATCAAC +
Preference number: 5 (lower is better)
Translates to: VHGLRSPQSRGAKSSSGFNKRAC*PTILIN
Trigger: GTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTT...GAAGCCCGAGGAACTCTTTGCTCCCCTGCTTTGGGGAGATCTCAAACCATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp TGCCCTCTGCCAGCTATCTGGAAGAGGCGAGCTCATACAGTCGGTCTTAGAAATTCAACTGCGCCCTTCTaGCCGTTAAATTTCATCCCT +
Preference number: 5 (lower is better)
Translates to: CPLPAIWKRRAHTVGLRNSTAPF*PLNFIP
Trigger: AGGGATGAAATTTAACGGCAAGAAGGGCGCAGTTGA...ATTTCTAAGACCGACTGTATGAGCTCGCCTCTTCCAGATAGCTGGCAGAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS-3UTR CAA 90 bp CTTTTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTAGCTGGTGGGGAGCTTCTTaGGTCACTGGTTCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: LLTREPVCPQSSSTHDSSWWGAS*VTGSLP
Trigger: TGGCAAGGAACCAGTGACCAAAGAAGCTCCCCACCA...GCTACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp AAACTTTTAACAAGAGAGCCTGTTTGCCCACAATCCTCATCAACCCACGATAGTGTCCTAGCCCTGCCGTaGCCTCACACTGGGAAGTCT +
Preference number: 5 (lower is better)
Translates to: KLLTREPVCPQSSSTHDSVLALP*PHTGKS
Trigger: AGACTTCCCAGTGTGAGGCAACGGCAGGGCTAGGAC...ACTATCGTGGGTTGATGAGGATTGTGGGCAAACAGGCTCTCTTGTTAAAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp CAACCCACGATAGTAGCAGACTTTTTACCTTTGCCATGTAAGTGTGTGGGGAGAAGACCCAGTCCTGTCTaGCGGAAACCTCCGTTTGAG +
Preference number: 5 (lower is better)
Translates to: QPTIVADFLPLPCKCVGRRPSPV*RKPPFE
Trigger: CTCAAACGGAGGTTTCCGCAAGACAGGACTGGGTCT...TCTCCCCACACACTTACATGGCAAAGGTAAAAAGTCTGCTACTATCGTGGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS GCA 90 bp ATAGGGTTGGAGGGCATGGACAAACTGCGCTTGGAAATCAGTGCATaGACCCGTCTTTTTAATGTCCCTCTTCTTTTCGAGAATTCCGCT +
Preference number: 5 (lower is better)
Translates to: IGLEGMDKLRLEISA*TRLFNVPLLFENSA
Trigger: AGCGGAATTCTCGAAAAGAAGAGGGACATTAAAAAGACGGGTGCATGCACTGATTTCCAAGCGCAGTTTGTCCATGCCCTCCAACCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598080.5
CDS-3UTR CAA 90 bp TTAGATACCGTCATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGAGAACTCCTGAGTACATaGAGGATGGAGACTCCATCC +
Preference number: 5 (lower is better)
Translates to: LDTVIWPKWRHQFKLLTRELLST*RMETPS
Trigger: GGATGGAGTCTCCATCCTCAATGTACTCAGGAGTTC...TCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATATGACGGTATCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS-3UTR CAA 90 bp ATATGGCCAAAGTGGAGACACCAGTTTAAACTTTTAACAAGAGAGCCTGTTTGCCTACAAGTGGAAGAGTaGAGACAAGCATGTATGTAT +
Preference number: 5 (lower is better)
Translates to: IWPKWRHQFKLLTREPVCLQVEE*RQACMY
Trigger: ATACATACATGCTTGTCTCAACTCTTCCACTTGTAG...GCAAACAGGCTCTCTTGTTAAAAGTTTAAACTGGTGTCTCCACTTTGGCCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS GCA 72 bp TCCCGCCACGGCCACGGCCGCAGCCGCTGTCGCCGCTaGTGCACTGCCCTCGGACCAGCGGAGCTGCCCCGC +
Preference number: 6 (lower is better)
Translates to: SRHGHGRSRCRR*CTALGPAELPR
Trigger: GCGGGGCAGCTCCGCTGGTCCGAGGGCAGTGCAGCAGCGGCGACAGCGGCTGCGGCCGTGGCCGTGGCGGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314228.9
CDS CCA 72 bp GCCGGCGAGGCCGGGGAGGCGAGCCCGCGGACGCGGTaGGCCCTGGAGCTGACTGGCTGGGCTTCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: AGEAGEASPRTR*ALELTGWASAV
Trigger: CACCGCAGAAGCCCAGCCAGTCAGCTCCAGGGCCCACCGCGTCCGCGGGCTCGCCTCCCCGGCCTCGCCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314228.9
ENST00000458714.2
ENST00000598080.5
ENST00000601282.1
CDS GCA 72 bp CTCTGGCCAAAGGCCTGGCCGCAGCTGGAGCATCGGTaGCAGGCAGTCGCCTGGCTGCCGGGCGCGGTTGGG +
Preference number: 6 (lower is better)
Translates to: LWPKAWPQLEHR*QAVAWLPGAVG
Trigger: CCCAACCGCGCCCGGCAGCCAGGCGACTGCCTGGCACCGATGCTCCAGCTGCGGCCAGGCCTTTGGCCAGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314228.9
ENST00000458714.2
ENST00000601282.1
CDS CCA 72 bp GCAGTAAGCGTCTCTGGCCAAAGGCCTGGCCGCAGCTaGAGCATCGGTGCCAGGCAGTCGCCTGGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: AVSVSGQRPGRS*SIGARQSPGCR
Trigger: CCGGCAGCCAGGCGACTGCCTGGCACCGATGCTCCAGCTGCGGCCAGGCCTTTGGCCAGAGACGCTTACTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314228.9
ENST00000458714.2
ENST00000601282.1
CDS CAA 72 bp GGGCCCTGGTGGGGAGCTTCTTTGGTCACTGGTTCCTaGCCAGTGGGACTAGGATCGGTAGCCCCGGCCGCG +
Preference number: 6 (lower is better)
Translates to: GPWWGASLVTGS*PVGLGSVAPAA
Trigger: CGCGGCCGGGGCTACCGATCCTAGTCCCACTGGCAAGGAACCAGTGACCAAAGAAGCTCCCCACCAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314228.9
ENST00000458714.2
ENST00000598080.5
ENST00000601282.1
CDS GCA 72 bp CCCCGGCCGCGGACTCCGCGCCTCGCTCCAGCATCTTaGTGGCACAGGAACCCGGCTTTTGACTTAGTCTCA +
Preference number: 6 (lower is better)
Translates to: PRPRTPRLAPAS*WHRNPAFDLVS
Trigger: TGAGACTAAGTCAAAAGCCGGGTTCCTGTGCCAGCAAGATGCTGGAGCGAGGCGCGGAGTCCGCGGCCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS CAA 72 bp GGATGGAGACTCCATCCGCTTCGGGCGCTTCGTGAGTaGGGTGCTGGGTCCCCAAGAGGGTGGTGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: GWRLHPLRALRE*GAGSPRGWWPG
Trigger: TCCAGGCCACCACCCTCTTGGGGACCCAGCACCCAACTCACGAAGCGCCCGAAGCGGATGGAGTCTCCATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS TCA 72 bp TTGAGGATGGAGACTCCATCCGCTTCGGGCGCTTCGTaGGTTGGGTGCTGGGTCCCCAAGAGGGTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: LRMETPSASGAS*VGCWVPKRVVA
Trigger: GGCCACCACCCTCTTGGGGACCCAGCACCCAACTCACGAAGCGCCCGAAGCGGATGGAGTCTCCATCCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS GCA 72 bp ATTTGCCACAGGCACCAGCGGGTTTCCGGCCAGAATTaGAACCAGGCCGAAGGAGGGAGGGCCAGGGGAGTT +
Preference number: 6 (lower is better)
Translates to: ICHRHQRVSGQN*NQAEGGRARGV
Trigger: AACTCCCCTGGCCCTCCCTCCTTCGGCCTGGTTGCAATTCTGGCCGGAAACCCGCTGGTGCCTGTGGCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS CAA 72 bp TATTTGCCACAGGCACCAGCGGGTTTCCGGCCAGAATaGCAACCAGGCCGAAGGAGGGAGGGCCAGGGGAGT +
Preference number: 6 (lower is better)
Translates to: YLPQAPAGFRPE*QPGRRREGQGS
Trigger: ACTCCCCTGGCCCTCCCTCCTTCGGCCTGGTTGCAATTCTGGCCGGAAACCCGCTGGTGCCTGTGGCAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS CAA 90 bp TCCTCACTTTATTTGCCACAGGCACCAGCGGGTTTCCGGCCAGAATaGCAACCAGGCCGAAGGAGGGAGGGCCAGGGGAGTTGCCCTCAG +
Preference number: 6 (lower is better)
Translates to: SSLYLPQAPAGFRPE*QPGRRREGQGSCPQ
Trigger: CTGAGGGCAACTCCCCTGGCCCTCCCTCCTTCGGCCTGGTTGCAATTCTGGCCGGAAACCCGCTGGTGCCTGTGGCAAATAAAGTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS GCA 72 bp GGGTCCGCACCTGTGAGTGAGCGCCTCCTTAAATCTTaGACCAACAGCCTCACCCTAGTCCTAGCCCTGCCG +
Preference number: 6 (lower is better)
Translates to: GSAPVSERLLKS*TNSLTLVLALP
Trigger: CGGCAGGGCTAGGACTAGGGTGAGGCTGTTGGTGCAAGATTTAAGGAGGCGCTCACTCACAGGTGCGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS CCA 72 bp CTTCGTGAGTTGGGTGCTGGGTCCCCAAGAGGGTGGTaGCCTGGACTTCTTAAACTTAAGGGAAGAGGGGAC +
Preference number: 6 (lower is better)
Translates to: LRELGAGSPRGW*PGLLKLKGRGD
Trigger: GTCCCCTCTTCCCTTAAGTTTAAGAAGTCCAGGCCACCACCCTCTTGGGGACCCAGCACCCAACTCACGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS CAA 72 bp TGCACCAACAGCCTCACCCTAGTCCTAGCCCTGCCGTaGCCTCACACTGGGAAGTCTAAAGGTTCCTGCCTT +
Preference number: 6 (lower is better)
Translates to: CTNSLTLVLALP*PHTGKSKGSCL
Trigger: AAGGCAGGAACCTTTAGACTTCCCAGTGTGAGGCAACGGCAGGGCTAGGACTAGGGTGAGGCTGTTGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS TCA 72 bp CTTAGAACCCGGAGCCCAGGACTAGGAAAAGGACGGTaGGGACCCTGGAGTGCAACATTTAAGGAGGCACTC +
Preference number: 6 (lower is better)
Translates to: LRTRSPGLGKGR*GPWSATFKEAL
Trigger: GAGTGCCTCCTTAAATGTTGCACTCCAGGGTCCTCACCGTCCTTTTCCTAGTCCTGGGCTCCGGGTTCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS TCA 72 bp AAAGAGACCCAGTCCTGTCTTGCGGAAACCTCCGTTTaGGGAAGGAGCATCTGGGTGCTTAGAACCCGGAGC +
Preference number: 6 (lower is better)
Translates to: KETQSCLAETSV*GRSIWVLRTRS
Trigger: GCTCCGGGTTCTAAGCACCCAGATGCTCCTTCCTCAAACGGAGGTTTCCGCAAGACAGGACTGGGTCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS GCA 72 bp CTGCCGTTGCCTCACACTGGGAAGTCTAAAGGTTCCTaGCTTCCTCACTTTATTTGCCACAGGCACCAGCGG +
Preference number: 6 (lower is better)
Translates to: LPLPHTGKSKGS*LPHFICHRHQR
Trigger: CCGCTGGTGCCTGTGGCAAATAAAGTGAGGAAGGCAGGAACCTTTAGACTTCCCAGTGTGAGGCAACGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS CAA 72 bp TCTCAGTTCATTGACGCCGCGTCAACTGCGCCCTTCTaGCCGTTAAATTTCATCCCTGGCTTGGATGGGGCC +
Preference number: 6 (lower is better)
Translates to: SQFIDAASTAPF*PLNFIPGLDGA
Trigger: GGCCCCATCCAAGCCAGGGATGAAATTTAACGGCAAGAAGGGCGCAGTTGACGCGGCGTCAATGAACTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314228.9
ENST00000600154.1
ENST00000601282.1
CDS TCA 72 bp TTGGAGGGCCCGGCTTTTGACTTAGTCTCAGTTCATTaGCGCCGCGTCAACTGCGCCCTTCTTGCCGTTAAA +
Preference number: 6 (lower is better)
Translates to: LEGPAFDLVSVH*RRVNCALLAVK
Trigger: TTTAACGGCAAGAAGGGCGCAGTTGACGCGGCGTCAATGAACTGAGACTAAGTCAAAAGCCGGGCCCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314228.9
CDS TCA 72 bp GCAGCCCTTTGGCCTGGCATGCATCTCCATAAAAGTTaGTTAGGGGCTGGAATTCTGAGGGCAGGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: AALWPGMHLHKS*LGAGILRAGLR
Trigger: TCTCAGCCCTGCCCTCAGAATTCCAGCCCCTAATCAACTTTTATGGAGATGCATGCCAGGCCAAAGGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458714.2
CDS TCA 72 bp CACAGGAACCCGGCTTTTGACTTAGTCTCAGTTCATTaGCGCCGCGTCAACTGCGCCCTTCTTGCCGTTAAA +
Preference number: 6 (lower is better)
Translates to: HRNPAFDLVSVH*RRVNCALLAVK
Trigger: TTTAACGGCAAGAAGGGCGCAGTTGACGCGGCGTCAATGAACTGAGACTAAGTCAAAAGCCGGGTTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601282.1
CDS TCA 72 bp GGGCTTCACGTCGAAGACCTAGCTTTACCCGGCTTTTaGCTTAGTCTCAGTTCATTGACGCCGCGTCAACTG +
Preference number: 6 (lower is better)
Translates to: GLHVEDLALPGF*LSLSSLTPRQL
Trigger: CAGTTGACGCGGCGTCAATGAACTGAGACTAAGTCAAAAGCCGGGTAAAGCTAGGTCTTCGACGTGAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600154.1
CDS CAA 90 bp GCAAATTCAAGCCAGAGGCAGTCCCTTCGCTATCTAAACCCAGGGTaGGAGTCTTTCAGCAGAGTGGGCGGAGTCTCCACAACTAACTCA +
Preference number: 6 (lower is better)
Translates to: ANSSQRQSLRYLNPG*ESFSRVGGVSTTNS
Trigger: TGAGTTAGTTGTGGAGACTCCGCCCACTCTGCTGAAAGACTCCAACCCTGGGTTTAGATAGCGAAGGGACTGCCTCTGGCTTGAATTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600154.1
CDS CAA 72 bp ATGGGGATAGGGTTGGAGGGCATGGACAAACTGCGCTaGGAAATCAGTGCATGCACCCGTCTTTTTAATGTC +
Preference number: 6 (lower is better)
Translates to: MGIGLEGMDKLR*EISACTRLFNV
Trigger: GACATTAAAAAGACGGGTGCATGCACTGATTTCCAAGCGCAGTTTGTCCATGCCCTCCAACCCTATCCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598080.5
CDS GCA 72 bp GAGGGCATGGACAAACTGCGCTTGGAAATCAGTGCATaGACCCGTCTTTTTAATGTCCCTCTTCTTTTCGAG +
Preference number: 6 (lower is better)
Translates to: EGMDKLRLEISA*TRLFNVPLLFE
Trigger: CTCGAAAAGAAGAGGGACATTAAAAAGACGGGTGCATGCACTGATTTCCAAGCGCAGTTTGTCCATGCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598080.5