Pregenerated sensors for ZNF572 (Homo sapiens)
Ensembl gene IDs: ENSG00000180938Ensembl transcript IDs: ENST00000319286.6
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTCAGGAATCCTGCCTTCTATTCTGGCTTTGGTCAAGACAGTGAGGTCATATCAGATCCAATAACCTGGTaGTTGGGGTCTTCCCATCCT | + |
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Preference number: 2 (lower is better) Translates to: FRNPAFYSGFGQDSEVISDPITW*LGSSHP Trigger: AGGATGGGAAGACCCCAATCACCAGGTTATTGGATC...TGATATGACCTCACTGTCTTGACCAAAGCCAGAATAGAAGGCAGGATTCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| 3UTR-3UTR TCA 90 bp | TTCAGGAATCCTGCCTTCTATTCTGGCTTTGGTCAAGACAGTGAGGTCATATCATTCATCCTTGGTGGATaGATCTCTCACTGGACAGAT | + |
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Preference number: 2 (lower is better) Translates to: FRNPAFYSGFGQDSEVISFILGG*ISHWTD Trigger: ATCTGTCCAGTGAGAGATTCATCCACCAAGGATGAA...TGATATGACCTCACTGTCTTGACCAAAGCCAGAATAGAAGGCAGGATTCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| 3UTR-3UTR GCA 90 bp | AATCATGGGCAACTCAGGAGTCCTAATCTTCCTACTCATCTACCTTTTGCACTATTCTCATGGTTCCTTTaGTTACTCTCAGGATTACTC | + |
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Preference number: 2 (lower is better) Translates to: NHGQLRSPNLPTHLPFALFSWFL*LLSGLL Trigger: GAGTAATCCTGAGAGTAAGCAAAGGAACCATGAGAA...TAGTGCAAAAGGTAGATGAGTAGGAAGATTAGGACTCCTGAGTTGCCCATGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAACACACTTCTACAGTCTTTATAGGAAATATTTATGGGTCTGTCAAGAACAATACAGTAGCCGCTaGTCACACAGAGCTACTGAG | + |
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Preference number: 2 (lower is better) Translates to: SRTHFYSLYRKYLWVCQEQYSSR*SHRATE Trigger: CTCAGTAGCTCTGTGTGACCAGCGGCTACTGTATTG...TTCTTGACAGACCCATAAATATTTCCTATAAAGACTGTAGAAGTGTGTTCTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| 3UTR-3UTR CCA 90 bp | AATATCCAATGTCTAAACCCAGTGTCTTCAATACTCTATCCCAATTCTACTCTATTTCTTCATCCTTGGTaGATGAATCTCTCACTGGAC | + |
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Preference number: 2 (lower is better) Translates to: NIQCLNPVSSILYPNSTLFLHPW*MNLSLD Trigger: GTCCAGTGAGAGATTCATCCACCAAGGATGAAGAAA...TAGAGTAGAATTGGGATAGAGTATTGAAGACACTGGGTTTAGACATTGGATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| 3UTR CAA 90 bp | GTCTTCAATACTCTATCCCAATTCTACTCTATATTACAATTCTTTTaGGAGAGCAAACCCTCCAGAACACACTTCTACAGTCTTTATAGG | + |
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Preference number: 2 (lower is better) Translates to: VFNTLSQFYSILQFF*ESKPSRTHFYSLYR Trigger: CCTATAAAGACTGTAGAAGTGTGTTCTGGAGGGTTTGCTCTCCAAAAAGAATTGTAATATAGAGTAGAATTGGGATAGAGTATTGAAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| 3UTR-3UTR CAA 90 bp | TTCAGGAATCCTGCCTTCTATTCTGGCTTTGGTCAAGACAGTGAGGTCATATCACTCCTTTCTTCATCCTaGGTGGATGAATCTCTCACT | + |
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Preference number: 3 (lower is better) Translates to: FRNPAFYSGFGQDSEVISLLSSS*VDESLT Trigger: AGTGAGAGATTCATCCACCAAGGATGAAGAAAGGAG...TGATATGACCTCACTGTCTTGACCAAAGCCAGAATAGAAGGCAGGATTCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| 3UTR CCA 72 bp | GAAAGAACCTTCTATAATATCCAATACAGTAGCCGCTaGTCACACAGAGCTACTGAGCACTTAGAAAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: ERTFYNIQYSSR*SHRATEHLESG Trigger: GCCACTTTCTAAGTGCTCAGTAGCTCTGTGTGACCAGCGGCTACTGTATTGGATATTATAGAAGGTTCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| 3UTR-3UTR CAA 90 bp | TTCAGGAATCCTGCCTTCTATTCTGGCTTTGGTCAAGACAGTGAGGTCATATCAGTTCTCATGGTTCCTTaGCTTACTCTCAGGATTACT | + |
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Preference number: 3 (lower is better) Translates to: FRNPAFYSGFGQDSEVISVLMVP*LTLRIT Trigger: AGTAATCCTGAGAGTAAGCAAAGGAACCATGAGAAC...TGATATGACCTCACTGTCTTGACCAAAGCCAGAATAGAAGGCAGGATTCCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| 3UTR-3UTR CAA 90 bp | GATGGGACCTCAGTTATCAGATCCATATACCAATTATGTCAAGAGGCAAAAGAACCTTCTATTCTGGCTTaGGTCAAGACAGTGAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: DGTSVIRSIYQLCQEAKEPSILA*VKTVRS Trigger: TGACCTCACTGTCTTGACCAAAGCCAGAATAGAAGG...TTCTTTTGCCTCTTGACATAATTGGTATATGGATCTGATAACTGAGGTCCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| 3UTR CCA 72 bp | CTACAGAACTTTGCAGCAGCTACAACTGACCCATTCTaGCTTCACATTCCTAATATGCATCTCTGCATATTA | + |
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Preference number: 3 (lower is better) Translates to: LQNFAAATTDPF*LHIPNMHLCIL Trigger: TAATATGCAGAGATGCATATTAGGAATGTGAAGCCAGAATGGGTCAGTTGTAGCTGCTGCAAAGTTCTGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| 3UTR-3UTR CAA 90 bp | GATGGGACCTCAGTTATCAGATCCATATACCAATTATGTCAAGAGGCAAAAGAAATATTACAATTCTTTTaGGAGAGCAAACCCTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: DGTSVIRSIYQLCQEAKEILQFF*ESKPSR Trigger: TCTGGAGGGTTTGCTCTCCAAAAAGAATTGTAATAT...TTCTTTTGCCTCTTGACATAATTGGTATATGGATCTGATAACTGAGGTCCCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| 3UTR-3UTR CAA 90 bp | TCCAGAACACACTTCTACAGTCTTTATAGGAAATATTTATGGGTCTGTCAAGAACACAGAATACCTAAATaGTCATGGTCCAACAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SRTHFYSLYRKYLWVCQEHRIPK*SWSNKE Trigger: TTCCTTGTTGGACCATGACAATTTAGGTATTCTGTG...TTCTTGACAGACCCATAAATATTTCCTATAAAGACTGTAGAAGTGTGTTCTGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR GCA 90 bp | ATCCAATACAGTAGCCGCTGGTCACACAGAGCTACTGAGCACTTAGAAAGTGGCGAAACCTGTTCTGGGTaGTACACCCAAGGCGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: IQYSSRWSHRATEHLESGETCSG*YTQGAL Trigger: CAGGGCGCCTTGGGTGTAGCACCCAGAACAGGTTTC...GCCACTTTCTAAGTGCTCAGTAGCTCTGTGTGACCAGCGGCTACTGTATTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR GCA 90 bp | AATATCCAATGTCTAAACCCAGTGTCTTCAATACTCTATCCCAATTCTACTCTAACACCCAAGGCGCCCTaGACCCCCAGCGGTCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: NIQCLNPVSSILYPNSTLTPKAP*TPSGPG Trigger: TCCCGGACCGCTGGGGGTGCAGGGCGCCTTGGGTGT...TAGAGTAGAATTGGGATAGAGTATTGAAGACACTGGGTTTAGACATTGGATATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | ATCCAATACAGTAGCCGCTGGTCACACAGAGCTACTGAGCACTTAGAAAGTGGCATTGGTATGTTCTCCTaGGTCCCATTCCTGGTGATT | + |
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Preference number: 4 (lower is better) Translates to: IQYSSRWSHRATEHLESGIGMFS*VPFLVI Trigger: AATCACCAGGAATGGGACTCAGGAGAACATACCAAT...GCCACTTTCTAAGTGCTCAGTAGCTCTGTGTGACCAGCGGCTACTGTATTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | TTTGCAGCAGCTACAACTGACCCATTCTGGCTTCACATTCCTAATATGCATCTCGGACATAGCTGTGACTaGAGCCTTTTCCGCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: FAAATTDPFWLHIPNMHLGHSCD*SLFRRQ Trigger: CTGTCTGCGGAAAAGGCTTCAGTCACAGCTATGTCC...GAGATGCATATTAGGAATGTGAAGCCAGAATGGGTCAGTTGTAGCTGCTGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | TTGGGTAAACCCCTGAGGCCAGTAATGATGTATCTCTACCCAATAAGGGAAGAGACCAGGGTGGAACTCTaGCTGAAAGTTTTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LGKPLRPVMMYLYPIREETRVEL*LKVFQH Trigger: GTGCTGGAAAACTTTCAGTCAGAGTTCCACCCTGGT...CTCTTCCCTTATTGGGTAGAGATACATCATTACTGGCCTCAGGGGTTTACCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | CTTTCTTTGGGTAAACCCCTGAGGCCAGTAATGATGTATCTCTACCCAATAAGGGGTAGGCACTTCTGCTaGAGCATTTCTCACAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSLGKPLRPVMMYLYPIRGRHFC*SISHSW Trigger: CCAGCTGTGAGAAATGCTTCAGCAGAAGTGCCTACC...CCTTATTGGGTAGAGATACATCATTACTGGCCTCAGGGGTTTACCCAAAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | TTGGGTAAACCCCTGAGGCCAGTAATGATGTATCTCTACCCAATAAGGGAAGAGTGCAGCAGCTACAACTaGCCCATTCTGGCTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: LGKPLRPVMMYLYPIREECSSYN*PILASH Trigger: ATGTGAAGCCAGAATGGGTCAGTTGTAGCTGCTGCA...CTCTTCCCTTATTGGGTAGAGATACATCATTACTGGCCTCAGGGGTTTACCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | CAATACAAAAACACACAAATACCCCGCCAGCATCAGGTGCACCACAATCATGAAGATCCAATAACCTGGTaGTTGGGGTCTTCCCATCCT | + |
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Preference number: 4 (lower is better) Translates to: QYKNTQIPRQHQVHHNHEDPITW*LGSSHP Trigger: AGGATGGGAAGACCCCAATCACCAGGTTATTGGATC...TTCATGATTGTGGTGCACCTGATGCTGGCGGGGTATTTGTGTGTTTTTGTATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR GCA 90 bp | ATCCAATACAGTAGCCGCTGGTCACACAGAGCTACTGAGCACTTAGAAAGTGGCCCCAATTCTCTGACTTaGCATCACTCTCATAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: IQYSSRWSHRATEHLESGPNSLT*HHSHRN Trigger: ATTCCTATGAGAGTGATGGCAAGTCAGAGAATTGGG...GCCACTTTCTAAGTGCTCAGTAGCTCTGTGTGACCAGCGGCTACTGTATTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR GCA 90 bp | ATCCAATACAGTAGCCGCTGGTCACACAGAGCTACTGAGCACTTAGAAAGTGGCCTCCTAACTGGATTCTaGATTCTTCTATCACATTGC | + |
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Preference number: 4 (lower is better) Translates to: IQYSSRWSHRATEHLESGLLTGF*ILLSHC Trigger: GCAATGTGATAGAAGAATGCAGAATCCAGTTAGGAG...GCCACTTTCTAAGTGCTCAGTAGCTCTGTGTGACCAGCGGCTACTGTATTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CCA 90 bp | TTCTATTCTGGCTTTGGTCAAGACAGTGAGGTCATATCACTAGATAACTCAGTTATCAGAAACCTGTTCTaGGTGCTACACCCAAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: FYSGFGQDSEVISLDNSVIRNLF*VLHPRR Trigger: GCGCCTTGGGTGTAGCACCCAGAACAGGTTTCTGAT...AACTGAGTTATCTAGTGATATGACCTCACTGTCTTGACCAAAGCCAGAATAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CCA 90 bp | AGTAATTCAATAGCAATTCTAGCTTCGGTTCTCATGGTTCCTTTGCTTACTCTCGCTGGACACAGGCATTaGTATGTTCTCCTGAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SNSIAILASVLMVPLLTLAGHRH*YVLLSP Trigger: GGGACTCAGGAGAACATACCAATGCCTGTGTCCAGC...GAGAGTAAGCAAAGGAACCATGAGAACCGAAGCTAGAATTGCTATTGAATTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CCA 90 bp | GATGGGACCTCAGTTATCAGATCCATATACCAATTATGTCAAGAGGCAAAAGAAGGTTTTTCCCCTATGTaGGTCCTCCGGTGCCTGATA | + |
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Preference number: 4 (lower is better) Translates to: DGTSVIRSIYQLCQEAKEGFSPM*VLRCLI Trigger: TATCAGGCACCGGAGGACCCACATAGGGGAAAAACC...TTCTTTTGCCTCTTGACATAATTGGTATATGGATCTGATAACTGAGGTCCCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | GATGGGACCTCAGTTATCAGATCCATATACCAATTATGTCAAGAGGCAAAAGAAGTATGTGTCCTTTGGTaGATCACCAGGGTGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: DGTSVIRSIYQLCQEAKEVCVLW*ITRVEL Trigger: GAGTTCCACCCTGGTGATTCACCAAAGGACACATAC...TTCTTTTGCCTCTTGACATAATTGGTATATGGATCTGATAACTGAGGTCCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR GCA 90 bp | AGTAATTCAATAGCAATTCTAGCTTCGGTTCTCATGGTTCCTTTGCTTACTCTCATGTGGGTCCTCCGGTaGCTGATAAGGTTAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SNSIAILASVLMVPLLTLMWVLR*LIRLKL Trigger: GAGCTTTAACCTTATCAGGCACCGGAGGACCCACAT...GAGAGTAAGCAAAGGAACCATGAGAACCGAAGCTAGAATTGCTATTGAATTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CCA 90 bp | GATGGGACCTCAGTTATCAGATCCATATACCAATTATGTCAAGAGGCAAAAGAACAATACAGTAGCCGCTaGTCACACAGAGCTACTGAG | + |
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Preference number: 4 (lower is better) Translates to: DGTSVIRSIYQLCQEAKEQYSSR*SHRATE Trigger: CTCAGTAGCTCTGTGTGACCAGCGGCTACTGTATTG...TTCTTTTGCCTCTTGACATAATTGGTATATGGATCTGATAACTGAGGTCCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | CAATACAAAAACACACAAATACCCCGCCAGCATCAGGTGCACCACAATCATGAAATCACATTGCAGTTCTaGCCCAAACTTTCCTCATAT | + |
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Preference number: 4 (lower is better) Translates to: QYKNTQIPRQHQVHHNHEITLQF*PKLSSY Trigger: ATATGAGGAAAGTTTGGGTCAGAACTGCAATGTGAT...TTCATGATTGTGGTGCACCTGATGCTGGCGGGGTATTTGTGTGTTTTTGTATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | CAATACAAAAACACACAAATACCCCGCCAGCATCAGGTGCACCACAATCATGAAATAAGGTTAAAGCTCTaGCTGAAGCTTTCACCACAA | + |
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Preference number: 4 (lower is better) Translates to: QYKNTQIPRQHQVHHNHEIRLKL*LKLSPQ Trigger: TTGTGGTGAAAGCTTCAGTCAGAGCTTTAACCTTAT...TTCATGATTGTGGTGCACCTGATGCTGGCGGGGTATTTGTGTGTTTTTGTATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | TTCTATTCTGGCTTTGGTCAAGACAGTGAGGTCATATCACTAGATAACTCAGTTTTCCAAGTCCATTCATaGGGAAAATCCCCAACGTCG | + |
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Preference number: 4 (lower is better) Translates to: FYSGFGQDSEVISLDNSVFQVHS*GKSPTS Trigger: CGACGTTGGGGATTTTCCTCATGAATGGACTTGGAA...AACTGAGTTATCTAGTGATATGACCTCACTGTCTTGACCAAAGCCAGAATAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR GCA 90 bp | CTTTCTTTGGGTAAACCCCTGAGGCCAGTAATGATGTATCTCTACCCAATAAGGTTCTCATGGTTCCTTTaGTTACTCTCAGGATTACTC | + |
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Preference number: 4 (lower is better) Translates to: LSLGKPLRPVMMYLYPIRFSWFL*LLSGLL Trigger: GAGTAATCCTGAGAGTAAGCAAAGGAACCATGAGAA...CCTTATTGGGTAGAGATACATCATTACTGGCCTCAGGGGTTTACCCAAAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CCA 90 bp | CAATACAAAAACACACAAATACCCCGCCAGCATCAGGTGCACCACAATCATGAAACAACTGACCCATTCTaGCTTCACATTCCTAATATG | + |
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Preference number: 4 (lower is better) Translates to: QYKNTQIPRQHQVHHNHETTDPF*LHIPNM Trigger: CATATTAGGAATGTGAAGCCAGAATGGGTCAGTTGT...TTCATGATTGTGGTGCACCTGATGCTGGCGGGGTATTTGTGTGTTTTTGTATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | AATATCCAATGTCTAAACCCAGTGTCTTCAATACTCTATCCCAATTCTACTCTAGGGTGGAACTCTGACTaGAAGTTTTCCAGCACTCAG | + |
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Preference number: 4 (lower is better) Translates to: NIQCLNPVSSILYPNSTLGWNSD*KFSSTQ Trigger: CTGAGTGCTGGAAAACTTTCAGTCAGAGTTCCACCC...TAGAGTAGAATTGGGATAGAGTATTGAAGACACTGGGTTTAGACATTGGATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR GCA 90 bp | TTCAGGAATCCTGCCTTCTATTCTGGCTTTGGTCAAGACAGTGAGGTCATATCAATTCTTCTATCACATTaGAGTTCTGACCCAAACTTT | + |
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Preference number: 4 (lower is better) Translates to: FRNPAFYSGFGQDSEVISILLSH*SSDPNF Trigger: AAAGTTTGGGTCAGAACTGCAATGTGATAGAAGAAT...TGATATGACCTCACTGTCTTGACCAAAGCCAGAATAGAAGGCAGGATTCCTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CCA 90 bp | GATGGGACCTCAGTTATCAGATCCATATACCAATTATGTCAAGAGGCAAAAGAAAAGGATGAATTCTGCTaGACACAGGCATTGGTATGT | + |
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Preference number: 4 (lower is better) Translates to: DGTSVIRSIYQLCQEAKEKDEFC*TQALVC Trigger: ACATACCAATGCCTGTGTCCAGCAGAATTCATCCTT...TTCTTTTGCCTCTTGACATAATTGGTATATGGATCTGATAACTGAGGTCCCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CCA 90 bp | TTCTATTCTGGCTTTGGTCAAGACAGTGAGGTCATATCACTAGATAACTCAGTTTTTCTTCATCCTTGGTaGATGAATCTCTCACTGGAC | + |
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Preference number: 4 (lower is better) Translates to: FYSGFGQDSEVISLDNSVFLHPW*MNLSLD Trigger: GTCCAGTGAGAGATTCATCCACCAAGGATGAAGAAA...AACTGAGTTATCTAGTGATATGACCTCACTGTCTTGACCAAAGCCAGAATAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CCA 90 bp | TTCTATTCTGGCTTTGGTCAAGACAGTGAGGTCATATCACTAGATAACTCAGTTACTGTCCTTGGACACTaGCTCAGATTTAGTGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: FYSGFGQDSEVISLDNSVTVLGH*LRFSEL Trigger: TAACTCACTAAATCTGAGCCAGTGTCCAAGGACAGT...AACTGAGTTATCTAGTGATATGACCTCACTGTCTTGACCAAAGCCAGAATAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | AGTAATTCAATAGCAATTCTAGCTTCGGTTCTCATGGTTCCTTTGCTTACTCTCTACTTGTATCTCCTGTaGAAGGGCTTTTCAAACTCT | + |
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Preference number: 4 (lower is better) Translates to: SNSIAILASVLMVPLLTLYLYLL*KGFSNS Trigger: AGAGTTTGAAAAGCCCTTTCACAGGAGATACAAGTA...GAGAGTAAGCAAAGGAACCATGAGAACCGAAGCTAGAATTGCTATTGAATTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | AATATCCAATGTCTAAACCCAGTGTCTTCAATACTCTATCCCAATTCTACTCTACACCAAATCTCATCTTaGACCCATGTCAGTGGCATT | + |
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Preference number: 4 (lower is better) Translates to: NIQCLNPVSSILYPNSTLHQISS*THVSGI Trigger: AATGCCACTGACATGGGTTCAAGATGAGATTTGGTG...TAGAGTAGAATTGGGATAGAGTATTGAAGACACTGGGTTTAGACATTGGATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | AATATCCAATGTCTAAACCCAGTGTCTTCAATACTCTATCCCAATTCTACTCTATTCATCCTTGGTGGATaGATCTCTCACTGGACAGAT | + |
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Preference number: 4 (lower is better) Translates to: NIQCLNPVSSILYPNSTLFILGG*ISHWTD Trigger: ATCTGTCCAGTGAGAGATTCATCCACCAAGGATGAA...TAGAGTAGAATTGGGATAGAGTATTGAAGACACTGGGTTTAGACATTGGATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | GATGGGACCTCAGTTATCAGATCCATATACCAATTATGTCAAGAGGCAAAAGAAAAAGAACCCAGTTCTTaGGCTGACCAAGAATTACAT | + |
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Preference number: 4 (lower is better) Translates to: DGTSVIRSIYQLCQEAKEKEPSS*ADQELH Trigger: ATGTAATTCTTGGTCAGCTCAAGAACTGGGTTCTTT...TTCTTTTGCCTCTTGACATAATTGGTATATGGATCTGATAACTGAGGTCCCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | AATATCCAATGTCTAAACCCAGTGTCTTCAATACTCTATCCCAATTCTACTCTACCCCATGCAATTAAATaGCCATCAGCTACAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: NIQCLNPVSSILYPNSTLPHAIK*PSATEL Trigger: AAGTTCTGTAGCTGATGGTCATTTAATTGCATGGGG...TAGAGTAGAATTGGGATAGAGTATTGAAGACACTGGGTTTAGACATTGGATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CCA 90 bp | AATATCCAATGTCTAAACCCAGTGTCTTCAATACTCTATCCCAATTCTACTCTATTGAACCCATGTCAGTaGCATTTCTTTTGCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: NIQCLNPVSSILYPNSTLLNPCQ*HFFCIL Trigger: GAGGATGCAAAAGAAATGCCACTGACATGGGTTCAA...TAGAGTAGAATTGGGATAGAGTATTGAAGACACTGGGTTTAGACATTGGATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CCA 90 bp | AGTAATTCAATAGCAATTCTAGCTTCGGTTCTCATGGTTCCTTTGCTTACTCTCTCATGGATAATAAGATaGGAGGTATTGCTGAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SNSIAILASVLMVPLLTLSWIIR*EVLLKL Trigger: AAGCTTCAGCAATACCTCCCATCTTATTATCCATGA...GAGAGTAAGCAAAGGAACCATGAGAACCGAAGCTAGAATTGCTATTGAATTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | TCCAGAACACACTTCTACAGTCTTTATAGGAAATATTTATGGGTCTGTCAAGAATCAGTTGGCAGCACATaGATTAGAACACACAATCAT | + |
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Preference number: 4 (lower is better) Translates to: SRTHFYSLYRKYLWVCQESVGST*IRTHNH Trigger: ATGATTGTGTGTTCTAATTCATGTGCTGCCAACTGA...TTCTTGACAGACCCATAAATATTTCCTATAAAGACTGTAGAAGTGTGTTCTGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CCA 90 bp | TCCAGAACACACTTCTACAGTCTTTATAGGAAATATTTATGGGTCTGTCAAGAAGGTTTCTCTCCTAACTaGATTCTGCATTCTTCTATC | + |
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Preference number: 4 (lower is better) Translates to: SRTHFYSLYRKYLWVCQEGFSPN*ILHSSI Trigger: GATAGAAGAATGCAGAATCCAGTTAGGAGAGAAACC...TTCTTGACAGACCCATAAATATTTCCTATAAAGACTGTAGAAGTGTGTTCTGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CCA 90 bp | TTCTATTCTGGCTTTGGTCAAGACAGTGAGGTCATATCACTAGATAACTCAGTTTATTACAATTCTTTTTaGAGAGCAAACCCTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: FYSGFGQDSEVISLDNSVYYNSF*RANPPE Trigger: TTCTGGAGGGTTTGCTCTCCAAAAAGAATTGTAATA...AACTGAGTTATCTAGTGATATGACCTCACTGTCTTGACCAAAGCCAGAATAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR TCA 90 bp | AATATCCAATGTCTAAACCCAGTGTCTTCAATACTCTATCCCAATTCTACTCTAAATCCAAAAATTAGATaGAATCATGGGCAACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: NIQCLNPVSSILYPNSTLNPKIR*NHGQLR Trigger: CCTGAGTTGCCCATGATTTCATCTAATTTTTGGATT...TAGAGTAGAATTGGGATAGAGTATTGAAGACACTGGGTTTAGACATTGGATATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CAA 90 bp | TTCAGGAATCCTGCCTTCTATTCTGGCTTTGGTCAAGACAGTGAGGTCATATCATGCTGGACACAGGCATaGGTATGTTCTCCTGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: FRNPAFYSGFGQDSEVISCWTQA*VCSPES Trigger: GGACTCAGGAGAACATACCAATGCCTGTGTCCAGCA...TGATATGACCTCACTGTCTTGACCAAAGCCAGAATAGAAGGCAGGATTCCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CAA 90 bp | TTGGGTAAACCCCTGAGGCCAGTAATGATGTATCTCTACCCAATAAGGGAAGAGATCACCAACCAGGCTTaGGGACTCAGGAAGATGAAT | + |
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Preference number: 5 (lower is better) Translates to: LGKPLRPVMMYLYPIREEITNQA*GLRKMN Trigger: ATTCATCTTCCTGAGTCCCAAAGCCTGGTTGGTGAT...CTCTTCCCTTATTGGGTAGAGATACATCATTACTGGCCTCAGGGGTTTACCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS CCA 90 bp | TATAGGGTCTGTCTACAAAGGATGAATTCTGCTGGACACAGGCATTaGTATGTTCTCCTGAGTCCCATTCCTGGTGATTGGGTTTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: YRVCLQRMNSAGHRH*YVLLSPIPGDWVFP Trigger: AGGAAAAACCCAATCACCAGGAATGGGACTCAGGAGAACATACCAATGCCTGTGTCCAGCAGAATTCATCCTTTGTAGACAGACCCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CAA 90 bp | TTGGGTAAACCCCTGAGGCCAGTAATGATGTATCTCTACCCAATAAGGGAAGAGACACCAAATCTCATCTaGAACCCATGTCAGTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: LGKPLRPVMMYLYPIREETPNLI*NPCQWH Trigger: ATGCCACTGACATGGGTTCAAGATGAGATTTGGTGT...CTCTTCCCTTATTGGGTAGAGATACATCATTACTGGCCTCAGGGGTTTACCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CAA 90 bp | TTCAGGAATCCTGCCTTCTATTCTGGCTTTGGTCAAGACAGTGAGGTCATATCACCTTCTATTCTGGCTTaGGTCAAGACAGTGAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: FRNPAFYSGFGQDSEVISPSILA*VKTVRS Trigger: TGACCTCACTGTCTTGACCAAAGCCAGAATAGAAGG...TGATATGACCTCACTGTCTTGACCAAAGCCAGAATAGAAGGCAGGATTCCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CAA 90 bp | CAATACAAAAACACACAAATACCCCGCCAGCATCAGGTGCACCACAATCATGAAATCAGCTACAGAACTTaGCAGCAGCTACAACTGACC | + |
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Preference number: 5 (lower is better) Translates to: QYKNTQIPRQHQVHHNHEISYRT*QQLQLT Trigger: GGTCAGTTGTAGCTGCTGCAAAGTTCTGTAGCTGAT...TTCATGATTGTGGTGCACCTGATGCTGGCGGGGTATTTGTGTGTTTTTGTATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CAA 90 bp | CTTTCTTTGGGTAAACCCCTGAGGCCAGTAATGATGTATCTCTACCCAATAAGGAAAAATACCCTTTCTTaGGGTAAACCCCTGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LSLGKPLRPVMMYLYPIRKNTLS*GKPLRP Trigger: TGGCCTCAGGGGTTTACCCAAAGAAAGGGTATTTTT...CCTTATTGGGTAGAGATACATCATTACTGGCCTCAGGGGTTTACCCAAAGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CAA 90 bp | ATCCAATACAGTAGCCGCTGGTCACACAGAGCTACTGAGCACTTAGAAAGTGGCATATTACAATTCTTTTaGGAGAGCAAACCCTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: IQYSSRWSHRATEHLESGILQFF*ESKPSR Trigger: TCTGGAGGGTTTGCTCTCCAAAAAGAATTGTAATAT...GCCACTTTCTAAGTGCTCAGTAGCTCTGTGTGACCAGCGGCTACTGTATTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CAA 90 bp | TTCTATTCTGGCTTTGGTCAAGACAGTGAGGTCATATCACTAGATAACTCAGTTTCCTGTATGTGTCCTTaGGTGAATCACCAGGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: FYSGFGQDSEVISLDNSVSCMCP*VNHQGG Trigger: TCCACCCTGGTGATTCACCAAAGGACACATACAGGA...AACTGAGTTATCTAGTGATATGACCTCACTGTCTTGACCAAAGCCAGAATAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CAA 90 bp | CAATACAAAAACACACAAATACCCCGCCAGCATCAGGTGCACCACAATCATGAAGTTCTCATGGTTCCTTaGCTTACTCTCAGGATTACT | + |
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Preference number: 5 (lower is better) Translates to: QYKNTQIPRQHQVHHNHEVLMVP*LTLRIT Trigger: AGTAATCCTGAGAGTAAGCAAAGGAACCATGAGAAC...TTCATGATTGTGGTGCACCTGATGCTGGCGGGGTATTTGTGTGTTTTTGTATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CAA 90 bp | AAAGTCCTCCTTTCTTCATCCTTGGTGGATGAATCTCTCACTGGACAGATCCAACACAGAATACCTAAATaGTCATGGTCCAACAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: KVLLSSSLVDESLTGQIQHRIPK*SWSNKE Trigger: TTCCTTGTTGGACCATGACAATTTAGGTATTCTGTG...TTGGATCTGTCCAGTGAGAGATTCATCCACCAAGGATGAAGAAAGGAGGACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS CCA 90 bp | CTCATAGGAATCATGACACCAAATCTCATCTTGAACCCATGTCAGTaGCATTTCTTTTGCATCCTCATGCTTATAATGTTGTGGTCTATG | + |
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Preference number: 5 (lower is better) Translates to: LIGIMTPNLILNPCQ*HFFCILMLIMLWSM Trigger: CATAGACCACAACATTATAAGCATGAGGATGCAAAAGAAATGCCACTGACATGGGTTCAAGATGAGATTTGGTGTCATGATTCCTATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CAA 90 bp | TCCAGAACACACTTCTACAGTCTTTATAGGAAATATTTATGGGTCTGTCAAGAACTCCTTTCTTCATCCTaGGTGGATGAATCTCTCACT | + |
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Preference number: 5 (lower is better) Translates to: SRTHFYSLYRKYLWVCQELLSSS*VDESLT Trigger: AGTGAGAGATTCATCCACCAAGGATGAAGAAAGGAG...TTCTTGACAGACCCATAAATATTTCCTATAAAGACTGTAGAAGTGTGTTCTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS GCA 90 bp | TATATGGTTTCTCTCCTAACTGGATTCTGCATTCTTCTATCACATTaGAGTTCTGACCCAAACTTTCCTCATATTCAGAACTTTCATAGG | + |
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Preference number: 5 (lower is better) Translates to: YMVSLLTGFCILLSH*SSDPNFPHIQNFHR Trigger: CCTATGAAAGTTCTGAATATGAGGAAAGTTTGGGTCAGAACTGCAATGTGATAGAAGAATGCAGAATCCAGTTAGGAGAGAAACCATATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CAA 90 bp | TCCAGAACACACTTCTACAGTCTTTATAGGAAATATTTATGGGTCTGTCAAGAAAATGACAAACTGTCCTaGGACACTGGCTCAGATTTA | + |
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Preference number: 5 (lower is better) Translates to: SRTHFYSLYRKYLWVCQENDKLS*DTGSDL Trigger: TAAATCTGAGCCAGTGTCCAAGGACAGTTTGTCATT...TTCTTGACAGACCCATAAATATTTCCTATAAAGACTGTAGAAGTGTGTTCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS-3UTR CAA 90 bp | AATATCCAATGTCTAAACCCAGTGTCTTCAATACTCTATCCCAATTCTACTCTATCAGTGGCATTTCTTTaGCATCCTCATGCTTATAAT | + |
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Preference number: 5 (lower is better) Translates to: NIQCLNPVSSILYPNSTLSVAFL*HPHAYN Trigger: ATTATAAGCATGAGGATGCAAAAGAAATGCCACTGA...TAGAGTAGAATTGGGATAGAGTATTGAAGACACTGGGTTTAGACATTGGATATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS GCA 72 bp | CAGAAACCTGTTCTGGGTGCTACACCCAAGGCGCCCTaGACCCCCAGCGGTCCGGGAGGAAGGTACCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: QKPVLGATPKAP*TPSGPGGRYPL Trigger: GAGGGGGTACCTTCCTCCCGGACCGCTGGGGGTGCAGGGCGCCTTGGGTGTAGCACCCAGAACAGGTTTCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS CCA 72 bp | TGTCTACAAAGGATGAATTCTGCTGGACACAGGCATTaGTATGTTCTCCTGAGTCCCATTCCTGGTGATTGG | + |
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Preference number: 6 (lower is better) Translates to: CLQRMNSAGHRH*YVLLSPIPGDW Trigger: CCAATCACCAGGAATGGGACTCAGGAGAACATACCAATGCCTGTGTCCAGCAGAATTCATCCTTTGTAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS CAA 72 bp | ATCACTCTCATAGGAATCATGACACCAAATCTCATCTaGAACCCATGTCAGTGGCATTTCTTTTGCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: ITLIGIMTPNLI*NPCQWHFFCIL Trigger: GAGGATGCAAAAGAAATGCCACTGACATGGGTTCAAGATGAGATTTGGTGTCATGATTCCTATGAGAGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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| CDS CCA 72 bp | ATCATGACACCAAATCTCATCTTGAACCCATGTCAGTaGCATTTCTTTTGCATCCTCATGCTTATAATGTTG | + |
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Preference number: 6 (lower is better) Translates to: IMTPNLILNPCQ*HFFCILMLIML Trigger: CAACATTATAAGCATGAGGATGCAAAAGAAATGCCACTGACATGGGTTCAAGATGAGATTTGGTGTCATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319286.6 |
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