Pregenerated sensors for ZNF57 (Homo sapiens)
Ensembl gene IDs: ENSG00000171970Ensembl transcript IDs: ENST00000306908.10, ENST00000522294.5, ENST00000523428.5, ENST00000590305.1, ENST00000614108.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCTCAGTGTCAGTTCTTCCGTGACTGTGTAGGTGTGAGGGACAAATaGAGGCCTGCTTACATTCCTCACCTGGAGGTGCTTTTCGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: PQCQFFRDCVGVRDK*RPAYIPHLEVLFVH Trigger: GTGGACGAAAAGCACCTCCAGGTGAGGAATGTAAGCAGGCCTGCATTTGTCCCTCACACCTACACAGTCACGGAAGAACTGACACTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306908.10 ENST00000523428.5 ENST00000614108.1 |
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| CDS TCA 90 bp | TTGTCCCGCCAAGTGAGAGGAGAAGGAAGAACTGAGAAGCACTTGTaGAGTTCAGTGTCGCGGGGCACAGGCTCAAGAATAGAAGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: LSRQVRGEGRTEKHL*SSVSRGTGSRIEGF Trigger: AAAACCTTCTATTCTTGAGCCTGTGCCCCGCGACACTGAACTTCACAAGTGCTTCTCAGTTCTTCCTTCTCCTCTCACTTGGCGGGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522294.5 |
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| CDS TCA 90 bp | CAGGCCTGCTTACATTCCTCACCTGGAGGTGCTTTTCGTCCACAGTaGGACTTGACGTGCCTTTTAAGAGAAGAAAGATGCGTGAAGACT | + |
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Preference number: 5 (lower is better) Translates to: QACLHSSPGGAFRPQ*DLTCLLREERCVKT Trigger: AGTCTTCACGCATCTTTCTTCTCTTAAAAGGCACGTCAAGTCTCACTGTGGACGAAAAGCACCTCCAGGTGAGGAATGTAAGCAGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000306908.10 ENST00000522294.5 ENST00000523428.5 ENST00000590305.1 ENST00000614108.1 |
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| CDS TCA 90 bp | GATGTATCCCCCATCATCTTCCTCTATTCATCTTGTCCCGCCAAGTaGGAGGAGAAGGAAGAACTGAGAAGCACTTGTGAAGTTCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: DVSPIIFLYSSCPAK*EEKEELRSTCEVQC Trigger: ACACTGAACTTCACAAGTGCTTCTCAGTTCTTCCTTCTCCTCTCACTTGGCGGGACAAGATGAATAGAGGAAGATGATGGGGGATACATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522294.5 |
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| CDS CCA 72 bp | CCTCAAAGACCACTGAGTCCATGTCTCCCCTGCTCCTaGGCTCTCCAAGGCGAGCTCTCCGTGGCCTCGCGG | + |
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Preference number: 6 (lower is better) Translates to: PQRPLSPCLPCS*ALQGELSVASR Trigger: CCGCGAGGCCACGGAGAGCTCGCCTTGGAGAGCCCAGGAGCAGGGGAGACATGGACTCAGTGGTCTTTGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306908.10 ENST00000614108.1 |
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| CDS GCA 72 bp | CAGTTCTTCCGTGACTGTGTAGGTGTGAGGGACAAATaGAGGCCTGCTTACATTCCTCACCTGGAGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: QFFRDCVGVRDK*RPAYIPHLEVL Trigger: AAGCACCTCCAGGTGAGGAATGTAAGCAGGCCTGCATTTGTCCCTCACACCTACACAGTCACGGAAGAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306908.10 ENST00000523428.5 ENST00000614108.1 |
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| CDS TCA 72 bp | CAAGTGAGAGGAGAAGGAAGAACTGAGAAGCACTTGTaGAGTTCAGTGTCGCGGGGCACAGGCTCAAGAATA | + |
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Preference number: 6 (lower is better) Translates to: QVRGEGRTEKHL*SSVSRGTGSRI Trigger: TATTCTTGAGCCTGTGCCCCGCGACACTGAACTTCACAAGTGCTTCTCAGTTCTTCCTTCTCCTCTCACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522294.5 |
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| CDS CAA 90 bp | TCCTGTGGAAAGAGATGTATCCCCCATCATCTTCCTCTATTCATCTaGTCCCGCCAAGTGAGAGGAGAAGGAAGAACTGAGAAGCACTTG | + |
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Preference number: 6 (lower is better) Translates to: SCGKRCIPHHLPLFI*SRQVRGEGRTEKHL Trigger: CAAGTGCTTCTCAGTTCTTCCTTCTCCTCTCACTTGGCGGGACAAGATGAATAGAGGAAGATGATGGGGGATACATCTCTTTCCACAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522294.5 |
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| CDS CAA 72 bp | AAGAGATGTATCCCCCATCATCTTCCTCTATTCATCTaGTCCCGCCAAGTGAGAGGAGAAGGAAGAACTGAG | + |
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Preference number: 6 (lower is better) Translates to: KRCIPHHLPLFI*SRQVRGEGRTE Trigger: CTCAGTTCTTCCTTCTCCTCTCACTTGGCGGGACAAGATGAATAGAGGAAGATGATGGGGGATACATCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522294.5 |
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| CDS TCA 72 bp | TTACATTCCTCACCTGGAGGTGCTTTTCGTCCACAGTaGGACTTGACGTGCCTTTTAAGAGAAGAAAGATGC | + |
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Preference number: 6 (lower is better) Translates to: LHSSPGGAFRPQ*DLTCLLREERC Trigger: GCATCTTTCTTCTCTTAAAAGGCACGTCAAGTCTCACTGTGGACGAAAAGCACCTCCAGGTGAGGAATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000306908.10 ENST00000522294.5 ENST00000523428.5 ENST00000590305.1 ENST00000614108.1 |
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| CDS CAA 72 bp | GGTAAGATCTGGCATTTGATGGATGGCTTCTCCATATaGATTACCTTCATTATGTGTACAGAATCTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: GKIWHLMDGFSI*ITFIMCTESVH Trigger: GTGGACAGATTCTGTACACATAATGAAGGTAATCAATATGGAGAAGCCATCCATCAAATGCCAGATCTTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000306908.10 ENST00000522294.5 ENST00000523428.5 ENST00000590305.1 ENST00000614108.1 |
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| CDS CAA 72 bp | AGCAGAAACTTTCTTGTGCAGGGTAAGATCTGGCATTaGATGGATGGCTTCTCCATATTGATTACCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: SRNFLVQGKIWH*MDGFSILITFI Trigger: AATGAAGGTAATCAATATGGAGAAGCCATCCATCAAATGCCAGATCTTACCCTGCACAAGAAAGTTTCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000306908.10 ENST00000522294.5 ENST00000523428.5 ENST00000590305.1 ENST00000614108.1 |
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