RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF562 (Homo sapiens)

Ensembl gene IDs: ENSG00000171466

Ensembl transcript IDs: ENST00000293648.8, ENST00000453372.7, ENST00000585350.1, ENST00000590155.5

Found 548 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGGCAATGAGAAACTGGCCATAAACAAAATCTCTGCAGCACTGTaGCATGCTCGTGATGGCTATGACGCCCATGCTGGAGGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: TGNEKLAINKISAAL*HARDGYDAHAGGCW
Trigger: CCAGCAGCCTCCAGCATGGGCGTCATAGCCATCACGAGCATGTCACAGTGCTGCAGAGATTTTGTTTATGGCCAGTTTCTCATTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 90 bp GCTAACACGAGTGGGCCTGGTTCTGGAGGATTTCCCAGTGGGTCCTaGAGAACCACAGTTTATTGGCTTGTGGGCAAAGGGGTATGTGTA +
Preference number: 1 (lower is better)
Translates to: ANTSGPGSGGFPSGS*RTTVYWLVGKGVCV
Trigger: TACACATACCCCTTTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCAGAACCAGGCCCACTCGTGTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 90 bp GGGAGACCGACCGACCTATTTGTTGGTCTCCATCGTGTGAAAACATaGGGAAGTGGGCACTTACATGCCAGGAAGAGAGCTCTCACTAGA +
Preference number: 1 (lower is better)
Translates to: GRPTDLFVGLHRVKT*GSGHLHARKRALTR
Trigger: TCTAGTGAGAGCTCTCTTCCTGGCATGTAAGTGCCCACTTCCTCATGTTTTCACACGATGGAGACCAACAAATAGGTCGGTCGGTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 90 bp CCCCATGATTCTATTACCTCCCACCTGGTCTCTCCCTCGACACCATaGGGATTATGGGAGCTACAATTCAAGATGACATTTGGGTGGGGA +
Preference number: 1 (lower is better)
Translates to: PHDSITSHLVSPSTP*GLWELQFKMTFGWG
Trigger: TCCCCACCCAAATGTCATCTTGAATTGTAGCTCCCATAATCCCCATGGTGTCGAGGGAGAGACCAGGTGGGAGGTAATAGAATCATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 90 bp CACAGTTCCACATGGCTGGGGAGGCCTCAAAATCATGACAGAAGGTaGAGGAGGAGCAAAGGCACATCTTATATGGCAGAAGGCAAGAGA +
Preference number: 1 (lower is better)
Translates to: HSSTWLGRPQNHDRR*RRSKGTSYMAEGKR
Trigger: TCTCTTGCCTTCTGCCATATAAGATGTGCCTTTGCTCCTCCTTCACCTTCTGTCATGATTTTGAGGCCTCCCCAGCCATGTGGAACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 90 bp CACTTTGGGAGGCCCAGAAGAGAGGATTACTCTAGCTCAGGAGTTTaGGGACAGCCTGGGCAATGGAGTGAGATACCTTCTCTACCAAAA +
Preference number: 1 (lower is better)
Translates to: HFGRPRREDYSSSGV*GQPGQWSEIPSLPK
Trigger: TTTTGGTAGAGAAGGTATCTCACTCCATTGCCCAGGCTGTCCTCAAACTCCTGAGCTAGAGTAATCCTCTCTTCTGGGCCTCCCAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR GCA 90 bp TACCACAGGGTGTCACTGGGCCTCTGTCAAGGAGCCTATTCTTTCTaGCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTT +
Preference number: 1 (lower is better)
Translates to: YHRVSLGLCQGAYSF*HQICLIACVTMHFL
Trigger: AAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGAATAGGCTCCTTGACAGAGGCCCAGTGACACCCTGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 90 bp AAGGTGTACTGTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTaGGGGAGGATGTATCTTATAAAGTACATTCACAAGGGCAGGGGA +
Preference number: 1 (lower is better)
Translates to: KVYCHKGQWQGTFTR*GRMYLIKYIHKGRG
Trigger: TCCCCTGCCCTTGTGAATGTACTTTATAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGACAGTACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR GCA 90 bp CTGTTCAAGCTCAGCTCTGAAGGCTGTGAGCCCCGATTCCCACTCTaGACTATATTTCTGTGTCTTTGTCTTAATTCCTCTAGAGCCACT +
Preference number: 1 (lower is better)
Translates to: LFKLSSEGCEPRFPL*TIFLCLCLNSSRAT
Trigger: AGTGGCTCTAGAGGAATTAAGACAAAGACACAGAAATATAGTGCAGAGTGGGAATCGGGGCTCACAGCCTTCAGAGCTGAGCTTGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 90 bp ACAAAGTACATTCACAAGGGCGGGGAGGGTGTATCATCACAAGGGTaGGGAGGAAGGTTACAAAGTACATTTACAAGGAGAGGAAAGGTG +
Preference number: 1 (lower is better)
Translates to: TKYIHKGGEGVSSQG*GGRLQSTFTRRGKV
Trigger: CACCTTTCCTCTCCTTGTAAATGTACTTTGTAACCTTCCTCCCCACCCTTGTGATGATACACCCTCCCCGCCCTTGTGAATGTACTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 90 bp AAAAGTGTGAGTTTAGGTGCTGTGTTCCTTGTTGTTGTTACAGTGTaGGCCACCGTGCCTGGCCGAGACTGGGTAAGTTATGAAGAAAAA +
Preference number: 1 (lower is better)
Translates to: KSVSLGAVFLVVVTV*ATVPGRDWVSYEEK
Trigger: TTTTTCTTCATAACTTACCCAGTCTCGGCCAGGCACGGTGGCTCACACTGTAACAACAACAAGGAACACAGCACCTAAACTCACACTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 90 bp GTTATGAAGAAAAAGAGGTTTAATGGACTCACAGTTCCACATGGCTaGGGAGGCCTCAAAATCATGACAGAAGGTGAAGGAGGAGCAAAG +
Preference number: 1 (lower is better)
Translates to: VMKKKRFNGLTVPHG*GGLKIMTEGEGGAK
Trigger: CTTTGCTCCTCCTTCACCTTCTGTCATGATTTTGAGGCCTCCCCAGCCATGTGGAACTGTGAGTCCATTAAACCTCTTTTTCTTCATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 90 bp AGTACATTTACAAGGAGAGGAAAGGTGTACTGTCACAAGGGCCAATaGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATAAAG +
Preference number: 1 (lower is better)
Translates to: STFTRRGKVYCHKGQ*QGTFTRWGRMYLIK
Trigger: CTTTATAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGACAGTACACCTTTCCTCTCCTTGTAAATGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 90 bp GGTGCCCAAAACTTCATTAGCAATTTTAATTTCACCTTGGTCCTGTaGTCTCGCCCTGCCTCCACTTGCCTTGTGATATTCTATTACCTT +
Preference number: 1 (lower is better)
Translates to: GAQNFISNFNFTLVL*SRPASTCLVIFYYL
Trigger: AAGGTAATAGAATATCACAAGGCAAGTGGAGGCAGGGCGAGATCACAGGACCAAGGTGAAATTAAAATTGCTAATGAAGTTTTGGGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 90 bp TCTATAGGAATAATGTTTATCACAGGCTTACTGTCAATAAATATGTaGGTCAAACTCTGTTCAAGCTCAGCTCTGAAGGCTGTGAGCCCC +
Preference number: 1 (lower is better)
Translates to: SIGIMFITGLLSINM*VKLCSSSALKAVSP
Trigger: GGGGCTCACAGCCTTCAGAGCTGAGCTTGAACAGAGTTTGACCCACATATTTATTGACAGTAAGCCTGTGATAAACATTATTCCTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 90 bp AAGCTGGAAATAAGGTTGGTAAGGGTTATTCTGGTGAGGTGTCATTaGGGAATGAGGAACATGCTATTGGGAAATGAAGAAAAGACAACC +
Preference number: 1 (lower is better)
Translates to: KLEIRLVRVILVRCH*GMRNMLLGNEEKTT
Trigger: GGTTGTCTTTTCTTCATTTCCCAATAGCATGTTCCTCATTCCCCAATGACACCTCACCAGAATAACCCTTACCAACCTTATTTCCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR GCA 90 bp CACAAATACAAAGATACGAATGAGCCAGAGCCAACCTTATATTCCTaGAGTAAATGCCACTGGGTTTACTATTTTCTTATCAAGCAGTTG +
Preference number: 1 (lower is better)
Translates to: HKYKDTNEPEPTLYS*SKCHWVYYFLIKQL
Trigger: CAACTGCTTGATAAGAAAATAGTAAACCCAGTGGCATTTACTGCAGGAATATAAGGTTGGCTCTGGCTCATTCGTATCTTTGTATTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 90 bp AATGCACTTCCTTCTGGGTCTCTCTCCAAGTGTAGTAAGTGTATATaGGAATCACTTTATTCAAACAGTGTAGTGCACTTAGTTAGAAAG +
Preference number: 1 (lower is better)
Translates to: NALPSGSLSKCSKCI*ESLYSNSVVHLVRK
Trigger: CTTTCTAACTAAGTGCACTACACTGTTTGAATAAAGTGATTCCCATATACACTTACTACACTTGGAGAGAGACCCAGAAGGAAGTGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR GCA 90 bp AAAGATACGAATGAGCCAGAGCCAACCTTATATTCCTGCAGTAAATaGCACTGGGTTTACTATTTTCTTATCAAGCAGTTGGAATTTATT +
Preference number: 1 (lower is better)
Translates to: KDTNEPEPTLYSCSK*HWVYYFLIKQLEFI
Trigger: AATAAATTCCAACTGCTTGATAAGAAAATAGTAAACCCAGTGGCATTTACTGCAGGAATATAAGGTTGGCTCTGGCTCATTCGTATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 90 bp AATTATACAGCATGTGTGTTTGAGCAATATGAAATCTGGGCACCTTaGAAAAAGAACAGGATAACAGCAATGTTTAGGAAACAAGAGAGA +
Preference number: 1 (lower is better)
Translates to: NYTACVFEQYEIWAP*KKNRITAMFRKQER
Trigger: TCTCTCTTGTTTCCTAAACATTGCTGTTATCCTGTTCTTTTTTCAAGGTGCCCAGATTTCATATTGCTCAAACACACATGCTGTATAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTAGCCTCCCAAGCGGCTaGGATTACAGGCGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSSLPSG*DYRRPP
Trigger: TGGCGGGCGCCTGTAATCCCAGCCGCTTGGGAGGCT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTACTGGTCTCGAACTCCTaGCCTCAGGTGACCCCCTGC +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILLVSNS*PQVTPC
Trigger: GCAGGGGGTCACCTGAGGTCAGGAGTTCGAGACCAG...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAACTCCTGACCTCAGGTaGCCCCCTGCCTTGACCTCC +
Preference number: 2 (lower is better)
Translates to: WRISQWVLKNHSLLACGQTPDLR*PPALTS
Trigger: GGAGGTCAAGGCAGGGGGTCACCTGAGGTCAGGAGT...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAACTGGTCTCGAACTCCTaGCCTCAGGTGACCCCCTGC +
Preference number: 2 (lower is better)
Translates to: WRISQWVLKNHSLLACGQLVSNS*PQVTPC
Trigger: GCAGGGGGTCACCTGAGGTCAGGAGTTCGAGACCAG...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAATGCACACCTGGGAGTaGGTCTCTGAACTGGCCCCC +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILMHTWE*VSELAP
Trigger: GGGGGCCAGTTCAGAGACCCACTCCCAGGTGTGCAT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTAATTCTGACCGCCGGTaGGCCAGGTGGAACAAAGCC +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSNSDRR*ARWNKA
Trigger: GGCTTTGTTCCACCTGGCTCACCGGCGGTCAGAATT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAATCGAGACTGCAGGGGTaGAATAGACCCCAGTCTCCC +
Preference number: 2 (lower is better)
Translates to: WRISQWVLKNHSLLACGQSRLQG*NRPQSP
Trigger: GGGAGACTGGGGTCTATTTCACCCCTGCAGTCTCGA...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGCACTCCAGCCTAGGTaGCATGGCAAGACACTGTCT +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILALQPR*HGKTLS
Trigger: AGACAGTGTCTTGCCATGTCACCTAGGCTGGAGTGC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTACTCCTGACATGCTCTaGAGGATCCATGGGAACAGA +
Preference number: 2 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPTPDML*RIHGNR
Trigger: TCTGTTCCCATGGATCCTGCAGAGCATGTCAGGAGT...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTACCTGTGATCTCGCCCTaGCTCCACTTGCCTTGTGAT +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILPVISP*LHLPCD
Trigger: ATCACAAGGCAAGTGGAGGCAGGGCGAGATCACAGG...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATTCAAGCAATTCTCCTaGCTCAGCCTCCCAAGCGGC +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILFKQFS*LSLPSG
Trigger: GCCGCTTGGGAGGCTGAGGCAGGAGAATTGCTTGAA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGGAGGCCAAGGCAGGTaGATCACCAAAGGTCAGATC +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILGGQGR*ITKGQI
Trigger: GATCTGACCTTTGGTGATCCACCTGCCTTGGCCTCC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAACCACAGGGTGTCACTaGGCCTCTGTCAAGGAGCCT +
Preference number: 2 (lower is better)
Translates to: WRISQWVLKNHSLLACGQTTGCH*ASVKEP
Trigger: AGGCTCCTTGACAGAGGCCCAGTGACACCCTGTGGT...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGTGGTTTCGCTATGTTaGCCAGGCTGGTTTGAACTC +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILVVSLC*PGWFEL
Trigger: GAGTTCAAACCAGCCTGGGCAACATAGCGAAACCAC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATCTCCACGACCCAGCTaGTCTCGGCAAAAATGCAAA +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILSPRPS*SRQKCK
Trigger: TTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGATGCACACCTGGGAGTaGGTCTCTGAACTGGCCCCC +
Preference number: 2 (lower is better)
Translates to: SFCHQICLIACVTMHFLLMHTWE*VSELAP
Trigger: GGGGGCCAGTTCAGAGACCCACTCCCAGGTGTGCAT...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAAAGAGAATGCACACCTaGGAGTGGGTCTCTGAACTG +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILKRMHT*EWVSEL
Trigger: CAGTTCAGAGACCCACTCCCAGGTGTGCATTCTCTT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAAGAAAAGAACCTATGTaGATATCGGGGCTGGTTCCC +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILRKEPM*ISGLVP
Trigger: GGGAACCAGCCCCGATATTCACATAGGTTCTTTTCT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATTAGCAGAAGCCTCTTaGGGATGGACTTGCAAACCA +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILLAEAS*GWTCKP
Trigger: TGGTTTGCAAGTCCATCCTCAAGAGGCTTCTGCTAA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAAATCATGACAGAAGGTaGAGGAGGAGCAAAGGCACA +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILNHDRR*RRSKGT
Trigger: TGTGCCTTTGCTCCTCCTTCACCTTCTGTCATGATT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTCTCAAGGGATCTTTTTaGCTCAGCCTCCAAAAGTGC +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSLKGSF*LSLQKC
Trigger: GCACTTTTGGAGGCTGAGGCAAAAAGATCCCTTGAG...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTCTTGGCCTCCCAAAGTaGTGTGATTACAGACATCAG +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSLGLPK*CDYRHQ
Trigger: CTGATGTCTGTAATCACAGCACTTTGGGAGGCCAAG...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTCTGATCTTGAACTCCTaGCCTCAAGGAATCCTTCTG +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSLILNS*PQGILL
Trigger: CAGAAGGATTCCTTGAGGCCAGGAGTTCAAGATCAG...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGTCATCCTAGCATTTTaGGAGGCTGATGCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILVILAF*EADAEG
Trigger: TCCTTCTGCATCAGCCTCCCAAAATGCTAGGATGAC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CAA 90 bp TGGTTCTGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATaGGCTTGTGGGCAAAGGGGTATGTGTATCAGTTGGCCTTTACTG +
Preference number: 2 (lower is better)
Translates to: WFWRISQWVLKNHSL*ACGQRGMCISWPLL
Trigger: CAGTAAAGGCCAACTGATACACATACCCCTTTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCAGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTCTCAATCCTGTCAGCTaGGGAGGATGTATATTACCT +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSLNPVS*GGCILP
Trigger: AGGTAATATACATCCTCCTCAGCTGACAGGATTGAG...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAAGCTACAATTCAAGATaGCATTTGGGTGGGGACACA +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILSYNSR*HLGGDT
Trigger: TGTGTCCCCACCCAAATGTCATCTTGAATTGTAGCT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATGGCTGACTGAGGCATaGGAATTACTTGAACAGCAT +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILWLTEA*ELLEQH
Trigger: ATGCTGTTCAAGTAATTCTCATGCCTCAGTCAGCCA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGAGATTTACTCACTGTaGCAAAAACAGCACACGCCT +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILEIYSL*QKQHTP
Trigger: AGGCGTGTGCTGTTTTTGTCACAGTGAGTAAATCTC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGGGCTGGGATCAATCTaGATGATTTATCTCGTACAG +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSGLGSI*MIYLVQ
Trigger: CTGTACGAGATAAATCATGCAGATTGATCCCAGCCC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTCCCCGATTCCCACTCTaGACTATATTTCTGTGTCTT +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSPRFPL*TIFLCL
Trigger: AAGACACAGAAATATAGTGCAGAGTGGGAATCGGGG...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCCTCAGGTGACCCCCTaGCTTGACCTCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSPQVTP*LDLPKC
Trigger: GCACTTTGGGAGGTCAAGGCAGGGGGTCACCTGAGG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGACTGGCTGAAGCCATaGCAGAAAAACATGGATTGT +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILDWLKP*QKNMDC
Trigger: ACAATCCATGTTTTTCTGCCATGGCTTCAGCCAGTC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGCTTCTGGTAAATTTTaGCATGAATGTGCCACACTG +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILASGKF*HECATL
Trigger: CAGTGTGGCACATTCATGTCAAAATTTACCAGAAGC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTCCACAAACAATAGCATaGGTGATTTGTGCCTTAAGG +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSPQTIA*VICALR
Trigger: CCTTAAGGCACAAATCACTCATGCTATTGTTTGTGG...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGCAATGTGACTGTATGTaGAAAGAGAAGGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: SFCHQICLIACVTMHFLLQCDCM*KEKGAG
Trigger: CCCCGCCCCCTTCTCTTTTCACATACAGTCACATTG...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGGAGCCTATTCTTTCTaGCACCAGATCTGTCTAATA +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSGAYSF*HQICLI
Trigger: TATTAGACAGATCTGGTGGCAGAAAGAATAGGCTCC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGGAGCCTATTCTTTCTaGCACCAGATCTGTCTAATA +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILGAYSF*HQICLI
Trigger: TATTAGACAGATCTGGTGGCAGAAAGAATAGGCTCC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATATCAGCTGGCAACTTaGTTGCAGCTCATAACATCA +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILYQLAT*LQLITS
Trigger: TGATGTTATGAGCTGCAAGCAAGTTGCCAGCTGATA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAAGGGCAAGCAACACCTaGCCCACCCAGGGCAGAAAA +
Preference number: 2 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQRASNT*PTQGRK
Trigger: TTTTCTGCCCTGGGTGGGCCAGGTGTTGCTTGCCCT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAACACCATGGGGATTATaGGAGCTACAATTCAAGATG +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILTPWGL*ELQFKM
Trigger: CATCTTGAATTGTAGCTCCCATAATCCCCATGGTGT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CAA 90 bp CTGTCAAGGAGCCTATTCTTTCTGCCACCAGATCTGTCTAATAGCTaGTGTGACAATGCACTTCCTTCTGGGTCTCTCTCCAAGTGTAGT +
Preference number: 2 (lower is better)
Translates to: LSRSLFFLPPDLSNS*CDNALPSGSLSKCS
Trigger: ACTACACTTGGAGAGAGACCCAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGAATAGGCTCCTTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAACCACAAACAATAGCATaGGTGATTTGTGCCTTAAGG +
Preference number: 2 (lower is better)
Translates to: WRISQWVLKNHSLLACGQPQTIA*VICALR
Trigger: CCTTAAGGCACAAATCACTCATGCTATTGTTTGTGG...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAATATGGTTGTCTGAGCTaGCTAAGGCAGATATTGGTA +
Preference number: 2 (lower is better)
Translates to: WRISQWVLKNHSLLACGQYGCLS*LRQILV
Trigger: TACCAATATCTGCCTTAGTCAGCTCAGACAACCATA...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTACCAGGAATACAAGGTTaGTGTAACATTGGAAAAGCA +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILPGIQG*CNIGKA
Trigger: TGCTTTTCCAATGTTACATCAACCTTGTATTCCTGG...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCTGAGGTCAGGAGTTTaGGACCAGCCTGGCCAACTT +
Preference number: 2 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSLRSGV*DQPGQL
Trigger: AAGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGCTGGGATTAAAAGTGTaGGCCACTATGACCAGCCAG +
Preference number: 2 (lower is better)
Translates to: SFCHQICLIACVTMHFLLLGLKV*ATMTSQ
Trigger: CTGGCTGGTCATAGTGGCTCACACTTTTAATCCCAG...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTAGCATGAGTGATTTGTaGCTTAAGGACATATTCCTG +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSSMSDL*LKDIFL
Trigger: CAGGAATATGTCCTTAAGGCACAAATCACTCATGCT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAACCTGTGATCTCGCCCTaGCTCCACTTGCCTTGTGAT +
Preference number: 2 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQPVISP*LHLPCD
Trigger: ATCACAAGGCAAGTGGAGGCAGGGCGAGATCACAGG...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGCCCCACCTCCCAAATTaGTGGGATTACAGGCATAAG +
Preference number: 2 (lower is better)
Translates to: SFCHQICLIACVTMHFLLPHLPN*WDYRHK
Trigger: CTTATGCCTGTAATCCCAGCAATTTGGGAGGTGGGG...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATGCAAACCAAAGTTGTaGTGGTTTCTACTGGTCAAA +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILCKPKL*WFLLVK
Trigger: TTTGACCAGTAGAAACCAGCACAACTTTGGTTTGCA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTCATGAGTGGGATTCATaGACTATATCAGCCATCTTA +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSHEWDS*TISAIL
Trigger: TAAGATGGCTGATATAGTCCATGAATCCCACTCATG...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTCATGGCAGAAAAACATaGATTGTGAAGGTTTCATGG +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSHGRKT*IVKVSW
Trigger: CCATGAAACCTTCACAATCCATGTTTTTCTGCCATG...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCCATGTTGGCTGGGCTaGTCTCGAACTCTTGACCTC +
Preference number: 2 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSPCWLG*SRTLDL
Trigger: GAGGTCAAGAGTTCGAGACCAGCCCAGCCAACATGG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAAAACCAAAGTTGTGCTaGTTTCTACTGGTCAAAGCA +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILKPKLC*FLLVKA
Trigger: TGCTTTGACCAGTAGAAACCAGCACAACTTTGGTTT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CAA 90 bp ATGGGAGAAATATCACTGAATTCTTTTTCTCAGCAAGGAACATCCTaGAGAAAGAGAATGCACACCTGGGAGTGGGTCTCTGAACTGGCC +
Preference number: 2 (lower is better)
Translates to: MGEISLNSFSQQGTS*RKRMHTWEWVSELA
Trigger: GGCCAGTTCAGAGACCCACTCCCAGGTGTGCATTCTCTTTCTCAAGGATGTTCCTTGCTGAGAAAAAGAATTCAGTGATATTTCTCCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTATGCAAAAGGAGACCTaGATTGCAGAAGAAATTGTT +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSMQKET*IAEEIV
Trigger: AACAATTTCTTCTGCAATTCAGGTCTCCTTTTGCAT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAACCCCCAAATTTCATATaGAGTTCCAAACCTCAATGT +
Preference number: 2 (lower is better)
Translates to: WRISQWVLKNHSLLACGQPPNFI*SSKPQC
Trigger: ACATTGAGGTTTGGAACTTCATATGAAATTTGGGGG...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAATTTCTCAAGTTGGCTaGCACTTAGGGAAAATAGAA +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILISQVG*HLGKIE
Trigger: TTCTATTTTCCCTAAGTGTCAGCCAACTTGAGAAAT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAGAAATCTGGGCACCTTaGAAAAAGAACAGGATAACA +
Preference number: 2 (lower is better)
Translates to: WRISQWVLKNHSLLACGQEIWAP*KKNRIT
Trigger: TGTTATCCTGTTCTTTTTTCAAGGTGCCCAGATTTC...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTAAAAGCGCCTTTCCATaGATTCACTTCTTCAAGTTT +
Preference number: 2 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSKSAFP*IHFFKF
Trigger: AAACTTGAAGAAGTGAATGCATGGAAAGGCGCTTTT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAATTGAGATCACACCATTaGACTCCAGCCTGGGCAACG +
Preference number: 2 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQLRSHH*TPAWAT
Trigger: CGTTGCCCAGGCTGGAGTGCAATGGTGTGATCTCAA...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTACTGTCAATAAATATGTaGGTCAAACTCTGTTCAAGC +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILLSINM*VKLCSS
Trigger: GCTTGAACAGAGTTTGACCCACATATTTATTGACAG...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGCCCAGGGCAGAAAACTaGAAAACTGCTCAAGGCATT +
Preference number: 2 (lower is better)
Translates to: SFCHQICLIACVTMHFLLPRAEN*KTAQGI
Trigger: AATGCCTTGAGCAGTTTTCCAGTTTTCTGCCCTGGG...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTAGGCAGGAGAATCACTaGAACTCAGGAGGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSRQENH*NSGGGG
Trigger: ACCTCCACCTCCTGAGTTCCAGTGATTCTCCTGCCT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAACAGGCTGGAGTGCAGTaGCAAGAACTCAACTCACTG +
Preference number: 2 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQQAGVQ*QELNSL
Trigger: CAGTGAGTTGAGTTCTTGCCACTGCACTCCAGCCTG...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAATTTCTCAAGTTGGCTaGCACTTAGGGAAAATAGAA +
Preference number: 2 (lower is better)
Translates to: WRISQWVLKNHSLLACGQISQVG*HLGKIE
Trigger: TTCTATTTTCCCTAAGTGTCAGCCAACTTGAGAAAT...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTATGGTCTTGATCTCTTaGCCTCATGATCTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSMVLIS*PHDLPA
Trigger: GGCAGGCAGATCATGAGGTCAAGAGATCAAGACCAT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAACTCCTGACATGCTCTaGAGGATCCATGGGAACAGA +
Preference number: 2 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQTPDML*RIHGNR
Trigger: TCTGTTCCCATGGATCCTGCAGAGCATGTCAGGAGT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATATTCCTGCAGTAAATaGCACTGGGTTTACTATTTT +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILYSCSK*HWVYYF
Trigger: AAAATAGTAAACCCAGTGGCATTTACTGCAGGAATA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAATCTCCACGACCCAGCTaGTCTCGGCAAAAATGCAAA +
Preference number: 2 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQSPRPS*SRQKCK
Trigger: TTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGA...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAATTGTAAAGATTTCATaGACACTTATCACTTCCCCA +
Preference number: 2 (lower is better)
Translates to: VTRANGRVHSLGGGGCILIVKIS*TLITSP
Trigger: TGGGGAAGTGATAAGTGTCCATGAAATCTTTACAAT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGTATGGTTGTCTGAGCTaGCTAAGGCAGATATTGGTA +
Preference number: 2 (lower is better)
Translates to: SFCHQICLIACVTMHFLLYGCLS*LRQILV
Trigger: TACCAATATCTGCCTTAGTCAGCTCAGACAACCATA...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCTTGGCCTCCCAAAGTaGTGTGATTACAGACATCAG +
Preference number: 2 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSLGLPK*CDYRHQ
Trigger: CTGATGTCTGTAATCACAGCACTTTGGGAGGCCAAG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAACCCAGGGCAGAAAACTaGAAAACTGCTCAAGGCATT +
Preference number: 2 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQPRAEN*KTAQGI
Trigger: AATGCCTTGAGCAGTTTTCCAGTTTTCTGCCCTGGG...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAATTGTAAAGATTTCATaGACACTTATCACTTCCCCA +
Preference number: 2 (lower is better)
Translates to: WRISQWVLKNHSLLACGQIVKIS*TLITSP
Trigger: TGGGGAAGTGATAAGTGTCCATGAAATCTTTACAAT...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGCTTGATATAAAGTGGTaGAGAACTTGGCAGAACTGT +
Preference number: 2 (lower is better)
Translates to: SFCHQICLIACVTMHFLLLDIKW*RTWQNC
Trigger: ACAGTTCTGCCAAGTTCTTCACCACTTTATATCAAG...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAAGCAAGGAACATCCTTaGGAAAGAGAATGCACACCT +
Preference number: 2 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQSKEHP*ERECTP
Trigger: AGGTGTGCATTCTCTTTCTCAAGGATGTTCCTTGCT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAACTCAATCCTGTCAGCTaGGGAGGATGTATATTACCT +
Preference number: 2 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQLNPVS*GGCILP
Trigger: AGGTAATATACATCCTCCTCAGCTGACAGGATTGAG...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTGGGCTGGGATCAATCTaGATGATTTATCTCGTACAG +
Preference number: 2 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSGLGSI*MIYLVQ
Trigger: CTGTACGAGATAAATCATGCAGATTGATCCCAGCCC...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAGACCGACCTATTTGTTaGTCTCCATCGTGTGAAAAC +
Preference number: 2 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQDRPIC*SPSCEN
Trigger: GTTTTCACACGATGGAGACCAACAAATAGGTCGGTC...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTAGTTCACAGGTGGGGTaGGGAATACAGAAATTCTTT +
Preference number: 2 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSSSQVG*GIQKFF
Trigger: AAAGAATTTCTGTATTCCTCACCCCACCTGTGAACT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAATGGTCTCGGCAAAAATaGAAAAGGAGACCTGAATTG +
Preference number: 2 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQWSRQK*KRRPEL
Trigger: CAATTCAGGTCTCCTTTTGCATTTTTGCCGAGACCA...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAATGCGGTATTCTCTTATaGTTGTCTGAGCTGACTAAG +
Preference number: 2 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQCGILL*LSELTK
Trigger: CTTAGTCAGCTCAGACAACCATAAGAGAATACCGCA...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTGACCGACCTATTTGTTaGTCTCCATCGTGTGAAAAC +
Preference number: 2 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISDRPIC*SPSCEN
Trigger: GTTTTCACACGATGGAGACCAACAAATAGGTCGGTC...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCTAATAAAAACTTGCTaGTTTTTGCGGCTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSLIKTC*FLRLVG
Trigger: CCCCACAAGCCGCAAAAACCAGCAAGTTTTTATTAG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTAGTTCACAGGTGGGGTaGGGAATACAGAAATTCTTT +
Preference number: 2 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISSSQVG*GIQKFF
Trigger: AAAGAATTTCTGTATTCCTCACCCCACCTGTGAACT...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCTGGGATCAATCTGCATaGTTTATCTCGTACAGAACT +
Preference number: 2 (lower is better)
Translates to: AILTEVRRETGLYYKRHCWDQSA*FISYRT
Trigger: AGTTCTGTACGAGATAAATCATGCAGATTGATCCCA...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTGCCATAAACAGGCAATaGGAAACTGGCCATAAACAA +
Preference number: 2 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISAINRQ*ETGHKQ
Trigger: TTGTTTATGGCCAGTTTCTCATTGCCTGTTTATGGC...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR GCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAAGCATGAGTGATTTGTaGCTTAAGGACATATTCCTG +
Preference number: 2 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQSMSDL*LKDIFL
Trigger: CAGGAATATGTCCTTAAGGCACAAATCACTCATGCT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGAGAATCCTCAAAGTGTaGCTGAACAATCATTTGATA +
Preference number: 2 (lower is better)
Translates to: SFCHQICLIACVTMHFLLRILKV*LNNHLI
Trigger: TATCAAATGATTGTTCAGCCACACTTTGAGGATTCT...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCAGAACTTGGAGATTTaGAAAATTCTCAGCCTATCC +
Preference number: 2 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSQNLEI*KILSLS
Trigger: GGATAGGCTGAGAATTTTCCAAATCTCCAAGTTCTG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTTATAAATTTGTGTTTTaGGCCAGATACGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSYKFVF*ARYGGS
Trigger: TGAGCCACCGTATCTGGCCCAAAACACAAATTTATA...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAAGTTCACAGGTGGGGTaGGGAATACAGAAATTCTTT +
Preference number: 2 (lower is better)
Translates to: MATNGLNGNNTHILTFIVSSQVG*GIQKFF
Trigger: AAAGAATTTCTGTATTCCTCACCCCACCTGTGAACT...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293648.8
ENST00000453372.7
ENST00000590155.5
3UTR-3UTR CCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTCATGAGTGGGATTCATaGACTATATCAGCCATCTTA +
Preference number: 2 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISHEWDS*TISAIL
Trigger: TAAGATGGCTGATATAGTCCATGAATCCCACTCATG...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTCAGAACTTGGAGATTTaGAAAATTCTCAGCCTATCC +
Preference number: 2 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISQNLEI*KILSLS
Trigger: GGATAGGCTGAGAATTTTCCAAATCTCCAAGTTCTG...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTTCATCATACGAATTTTaGGGGTCATTGTTCAGTCCA +
Preference number: 2 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISSSYEF*GSLFSP
Trigger: TGGACTGAACAATGACCCCCAAAATTCGTATGATGA...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR TCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTATGCAAAAGGAGACCTaGATTGCAGAAGAAATTGTT +
Preference number: 2 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISMQKET*IAEEIV
Trigger: AACAATTTCTTCTGCAATTCAGGTCTCCTTTTGCAT...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp ATGACGCCCATGCTGGAGGCTGCTGGTTTACCAGAATaGGGGCAAGCAACACCTGGCCCACCCAGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: MTPMLEAAGLPE*GQATPGPPRAE
Trigger: TTCTGCCCTGGGTGGGCCAGGTGTTGCTTGCCCTCATTCTGGTAAACCAGCAGCCTCCAGCATGGGCGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp GGGTGTAGCCATCTCTTATGGTCGAGACTGCAGGGGTaGAATAGACCCCAGTCTCCCATAGCACTCCCAGGC +
Preference number: 3 (lower is better)
Translates to: GCSHLLWSRLQG*NRPQSPIALPG
Trigger: GCCTGGGAGTGCTATGGGAGACTGGGGTCTATTTCACCCCTGCAGTCTCGACCATAAGAGATGGCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGTTGCCCAGGCTGGTTaGAACTCCTTGGCTCAAGGG +
Preference number: 3 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSVAQAG*NSLAQG
Trigger: CCCTTGAGCCAAGGAGTTCAAACCAGCCTGGGCAAC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp AGTGGGCCTGGTTCTGGAGGATTTCCCAGTGGGTCCTaGAGAACCACAGTTTATTGGCTTGTGGGCAAAGGG +
Preference number: 3 (lower is better)
Translates to: SGPGSGGFPSGS*RTTVYWLVGKG
Trigger: CCCTTTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCAGAACCAGGCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR GCA 72 bp ACTGCAGCCTTTACTTCCTGGGCTCAAGCAGTCCTTTaGCTGAGTACCAGGGACTACATACGTGCACCACCA +
Preference number: 3 (lower is better)
Translates to: TAAFTSWAQAVL*LSTRDYIRAPP
Trigger: TGGTGGTGCACGTATGTAGTCCCTGGTACTCAGGCAAAGGACTGCTTGAGCCCAGGAAGTAAAGGCTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp CACTTACATGCCAGGAAGAGAGCTCTCACTAGAGGTTaGCCATGCTGGCACTCTGATCTCAGACTTCCAGCC +
Preference number: 3 (lower is better)
Translates to: HLHARKRALTRG*PCWHSDLRLPA
Trigger: GGCTGGAAGTCTGAGATCAGAGTGCCAGCATGGTCAACCTCTAGTGAGAGCTCTCTTCCTGGCATGTAAGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 72 bp GGGCAAGCAACACCTGGCCCACCCAGGGCAGAAAACTaGAAAACTGCTCAAGGCATTCCTAAACCACAAACA +
Preference number: 3 (lower is better)
Translates to: GQATPGPPRAEN*KTAQGIPKPQT
Trigger: TGTTTGTGGTTTAGGAATGCCTTGAGCAGTTTTCCAGTTTTCTGCCCTGGGTGGGCCAGGTGTTGCTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 72 bp TCCCACCTGGTCTCTCCCTCGACACCATGGGGATTATaGGAGCTACAATTCAAGATGACATTTGGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: SHLVSPSTPWGL*ELQFKMTFGWG
Trigger: TCCCCACCCAAATGTCATCTTGAATTGTAGCTCCCATAATCCCCATGGTGTCGAGGGAGAGACCAGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 72 bp ACAGAAGGTGAAGGAGGAGCAAAGGCACATCTTATATaGCAGAAGGCAAGAGAGCCTGTCCAGGGGAACAGC +
Preference number: 3 (lower is better)
Translates to: TEGEGGAKAHLI*QKAREPVQGNS
Trigger: GCTGTTCCCCTGGACAGGCTCTCTTGCCTTCTGCCATATAAGATGTGCCTTTGCTCCTCCTTCACCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATGCAGTGGTGCAATCTaGGCTCAATGCAACCTCCAC +
Preference number: 3 (lower is better)
Translates to: VTRANGRVHSLGGGGCILCSGAI*AQCNLH
Trigger: GTGGAGGTTGCATTGAGCCAAGATTGCACCACTGCA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATCTGGTGAGGTGTCATaGGGGAATGAGGAACATGCT +
Preference number: 3 (lower is better)
Translates to: VTRANGRVHSLGGGGCILSGEVS*GNEEHA
Trigger: AGCATGTTCCTCATTCCCCAATGACACCTCACCAGA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTTTTTCCTGCAGGACATaGTTGCAGGAAGTCAGGGAC +
Preference number: 3 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSFSCRT*LQEVRD
Trigger: GTCCCTGACTTCCTGCAACAATGTCCTGCAGGAAAA...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAATGCAGTGGTGCAATCTaGGCTCAATGCAACCTCCAC +
Preference number: 3 (lower is better)
Translates to: WRISQWVLKNHSLLACGQCSGAI*AQCNLH
Trigger: GTGGAGGTTGCATTGAGCCAAGATTGCACCACTGCA...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp GGAGACCGACCGACCTATTTGTTGGTCTCCATCGTGTaGAAACATGAGGAAGTGGGCACTTACATGCCAGGA +
Preference number: 3 (lower is better)
Translates to: GDRPTYLLVSIV*KHEEVGTYMPG
Trigger: TCCTGGCATGTAAGTGCCCACTTCCTCATGTTTTCACACGATGGAGACCAACAAATAGGTCGGTCGGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp AGGCCCAGAAGAGAGGATTACTCTAGCTCAGGAGTTTaGGGACAGCCTGGGCAATGGAGTGAGATACCTTCT +
Preference number: 3 (lower is better)
Translates to: RPRREDYSSSGV*GQPGQWSEIPS
Trigger: AGAAGGTATCTCACTCCATTGCCCAGGCTGTCCTCAAACTCCTGAGCTAGAGTAATCCTCTCTTCTGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 72 bp GGGTTCACCATGTTGCCCAAAATGGTCTCAATCTCTTaGCCTCGTGATCCAACCATCTCAGCCTCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: GFTMLPKMVSIS*PRDPTISASQS
Trigger: ACTTTGGGAGGCTGAGATGGTTGGATCACGAGGCCAAGAGATTGAGACCATTTTGGGCAACATGGTGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 72 bp ACAAGGAGAGGAAAGGTGTACTGTCACAAGGGCCAATaGCAGGGTACATTCACTAGGTGGGGGAGGATGTAT +
Preference number: 3 (lower is better)
Translates to: TRRGKVYCHKGQ*QGTFTRWGRMY
Trigger: ATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGACAGTACACCTTTCCTCTCCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTCAGCAAGGAACATCCTaGAGAAAGAGAATGCACACC +
Preference number: 3 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSQQGTS*RKRMHT
Trigger: GGTGTGCATTCTCTTTCTCAAGGATGTTCCTTGCTG...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAACCAGCCTGGCCAACTaGATGAAACCGTCTCTACTA +
Preference number: 3 (lower is better)
Translates to: WRISQWVLKNHSLLACGQTSLAN*MKPSLL
Trigger: TAGTAGAGACGGTTTCATCAAGTTGGCCAGGCTGGT...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp GAGAAACTGGCCATAAACAAAATCTCTGCAGCACTGTaGCATGCTCGTGATGGCTATGACGCCCATGCTGGA +
Preference number: 3 (lower is better)
Translates to: EKLAINKISAAL*HARDGYDAHAG
Trigger: TCCAGCATGGGCGTCATAGCCATCACGAGCATGTCACAGTGCTGCAGAGATTTTGTTTATGGCCAGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp TCACAGTTCCACATGGCTGGGGAGGCCTCAAAATCATaGCAGAAGGTGAAGGAGGAGCAAAGGCACATCTTA +
Preference number: 3 (lower is better)
Translates to: SQFHMAGEASKS*QKVKEEQRHIL
Trigger: TAAGATGTGCCTTTGCTCCTCCTTCACCTTCTGTCATGATTTTGAGGCCTCCCCAGCCATGTGGAACTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp AGTTTAGGTGCTGTGTTCCTTGTTGTTGTTACAGTGTaGGCCACCGTGCCTGGCCGAGACTGGGTAAGTTAT +
Preference number: 3 (lower is better)
Translates to: SLGAVFLVVVTV*ATVPGRDWVSY
Trigger: ATAACTTACCCAGTCTCGGCCAGGCACGGTGGCTCACACTGTAACAACAACAAGGAACACAGCACCTAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAAAGGACATATTCCTGTaGCAGATAACAAGCCAGAGC +
Preference number: 3 (lower is better)
Translates to: VTRANGRVHSLGGGGCILKDIFL*QITSQS
Trigger: GCTCTGGCTTGTTATCTGCAACAGGAATATGTCCTT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAACAGCAAGGAACATCCTaGAGAAAGAGAATGCACACC +
Preference number: 3 (lower is better)
Translates to: WRISQWVLKNHSLLACGQQQGTS*RKRMHT
Trigger: GGTGTGCATTCTCTTTCTCAAGGATGTTCCTTGCTG...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAATATCAGCTGGCAACTaGCTTGCAGCTCATAACATC +
Preference number: 3 (lower is better)
Translates to: VTRANGRVHSLGGGGCILISAGN*LAAHNI
Trigger: GATGTTATGAGCTGCAAGCAAGTTGCCAGCTGATAT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATGTGAGCCACTCTGCTaGGCCCTTTATTCTTTTACA +
Preference number: 3 (lower is better)
Translates to: VTRANGRVHSLGGGGCILCEPLC*ALYSFT
Trigger: TGTAAAAGAATAAAGGGCCAAGCAGAGTGGCTCACA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR GCA 72 bp GTGTCACTGGGCCTCTGTCAAGGAGCCTATTCTTTCTaGCACCAGATCTGTCTAATAGCTTGTGTGACAATG +
Preference number: 3 (lower is better)
Translates to: VSLGLCQGAYSF*HQICLIACVTM
Trigger: CATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGAATAGGCTCCTTGACAGAGGCCCAGTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 72 bp TGGCTTCTGGTAAATTTTGACATGAATGTGCCACACTaGCAGCCACTAACCAACAGGGGCTGGGATCAATCT +
Preference number: 3 (lower is better)
Translates to: WLLVNFDMNVPH*QPLTNRGWDQS
Trigger: AGATTGATCCCAGCCCCTGTTGGTTAGTGGCTGCCAGTGTGGCACATTCATGTCAAAATTTACCAGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 72 bp CCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTaGGCAAAGGGGTATGTGTATCAGTTGGCCTTTACT +
Preference number: 3 (lower is better)
Translates to: PVGPEEPQFIGL*AKGYVYQLAFT
Trigger: AGTAAAGGCCAACTGATACACATACCCCTTTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 72 bp ATTCACAAGGGCGGGGAGGGTGTATCATCACAAGGGTaGGGAGGAAGGTTACAAAGTACATTTACAAGGAGA +
Preference number: 3 (lower is better)
Translates to: IHKGGEGVSSQG*GGRLQSTFTRR
Trigger: TCTCCTTGTAAATGTACTTTGTAACCTTCCTCCCCACCCTTGTGATGATACACCCTCCCCGCCCTTGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTCCAGAACTTGGAGATTaGGAAAATTCTCAGCCTATC +
Preference number: 3 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSPELGD*ENSQPI
Trigger: GATAGGCTGAGAATTTTCCAAATCTCCAAGTTCTGG...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAAAGCTGGAAATAAGGTaGGTAAGGGTTATTCTGGTG +
Preference number: 3 (lower is better)
Translates to: VTRANGRVHSLGGGGCILKLEIR*VRVILV
Trigger: CACCAGAATAACCCTTACCAACCTTATTTCCAGCTT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAATCATCATACGAATTTaGGGGGTCATTGTTCAGTCC +
Preference number: 3 (lower is better)
Translates to: VTRANGRVHSLGGGGCILIIIRI*GVIVQS
Trigger: GGACTGAACAATGACCCCCAAAATTCGTATGATGAT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGGTGACCCACACCTATTaGCACACTCCCTCCCCTTTT +
Preference number: 3 (lower is better)
Translates to: SFCHQICLIACVTMHFLLVTHTY*HTPSPF
Trigger: AAAAGGGGAGGGAGTGTGCAAATAGGTGTGGGTCAC...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAATCCTGCAGGACATTGTaGCAGGAAGTCAGGGACCCC +
Preference number: 3 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQSCRTL*QEVRDP
Trigger: GGGGTCCCTGACTTCCTGCAACAATGTCCTGCAGGA...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGGAATTTGCAGTAAGTaGAGATCACACCATTGCACT +
Preference number: 3 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSGICSK*RSHHCT
Trigger: AGTGCAATGGTGTGATCTCAACTTACTGCAAATTCC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAACTTGCAAACCAAAGTaGTGCTGGTTTCTACTGGTC +
Preference number: 3 (lower is better)
Translates to: WRISQWVLKNHSLLACGQTCKPK*CWFLLV
Trigger: GACCAGTAGAAACCAGCACAACTTTGGTTTGCAAGT...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGAATTTTGGGGGTCATaGTTCAGTCCAAAGTACTTA +
Preference number: 3 (lower is better)
Translates to: VTRANGRVHSLGGGGCILEFWGS*FSPKYL
Trigger: TAAGTACTTTGGACTGAACAATGACCCCCAAAATTC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTATCCCTAATAAAAACTaGCTGGTTTTTGCGGCTTGT +
Preference number: 3 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSIPNKN*LVFAAC
Trigger: ACAAGCCGCAAAAACCAGCAAGTTTTTATTAGGGAT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAGATCTGTCTAATAGCTaGTGTGACAATGCACTTCCT +
Preference number: 3 (lower is better)
Translates to: WRISQWVLKNHSLLACGQDLSNS*CDNALP
Trigger: AGGAAGTGCATTGTCACACAAGCTATTAGACAGATC...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp TCTGGGGCCTACATCATCTTGGCTTCTGGTAAATTTTaGCATGAATGTGCCACACTGGCAGCCACTAACCAA +
Preference number: 3 (lower is better)
Translates to: SGAYIILASGKF*HECATLAATNQ
Trigger: TTGGTTAGTGGCTGCCAGTGTGGCACATTCATGTCAAAATTTACCAGAAGCCAAGATGATGTAGGCCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp AAAAACAGCACACGCCTATTATCCCAGCTACTTGGCTaGCTGAGGCATGAGAATTACTTGAACAGCATGGGG +
Preference number: 3 (lower is better)
Translates to: KNSTRLLSQLLG*LRHENYLNSMG
Trigger: CCCCATGCTGTTCAAGTAATTCTCATGCCTCAGTCAGCCAAGTAGCTGGGATAATAGGCGTGTGCTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 72 bp TCTATTACCTCCCACCTGGTCTCTCCCTCGACACCATaGGGATTATGGGAGCTACAATTCAAGATGACATTT +
Preference number: 3 (lower is better)
Translates to: SITSHLVSPSTP*GLWELQFKMTF
Trigger: AAATGTCATCTTGAATTGTAGCTCCCATAATCCCCATGGTGTCGAGGGAGAGACCAGGTGGGAGGTAATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGTCGCCCTGCCTCCACTaGCCTTGTGATATTCTATTA +
Preference number: 3 (lower is better)
Translates to: SFCHQICLIACVTMHFLLSPCLH*PCDILL
Trigger: TAATAGAATATCACAAGGCAAGTGGAGGCAGGGCGA...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTGCTGGTCTCGAACTCTaGACCTCAAATGATCTGCCC +
Preference number: 3 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSAGLEL*TSNDLP
Trigger: GGGCAGATCATTTGAGGTCAAGAGTTCGAGACCAGC...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGAAATATTTTGCAGTATaGGCCGGGCACAGTGGCTTG +
Preference number: 3 (lower is better)
Translates to: SFCHQICLIACVTMHFLLKYFAV*AGHSGL
Trigger: CAAGCCACTGTGCCCGGCCAATACTGCAAAATATTT...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR GCA 72 bp CTGGCAGCCACTAACCAACAGGGGCTGGGATCAATCTaGATGATTTATCTCGTACAGAACTTGTTAATGCTA +
Preference number: 3 (lower is better)
Translates to: LAATNQQGLGSI*MIYLVQNLLML
Trigger: TAGCATTAACAAGTTCTGTACGAGATAAATCATGCAGATTGATCCCAGCCCCTGTTGGTTAGTGGCTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR GCA 72 bp TTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATaGAAAAGGAGACCTGAATTGCAGAAGAAATTGTTA +
Preference number: 3 (lower is better)
Translates to: LGSPRPSWSRQK*KRRPELQKKLL
Trigger: TAACAATTTCTTCTGCAATTCAGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 72 bp AAAAAGAGGTTTAATGGACTCACAGTTCCACATGGCTaGGGAGGCCTCAAAATCATGACAGAAGGTGAAGGA +
Preference number: 3 (lower is better)
Translates to: KKRFNGLTVPHG*GGLKIMTEGEG
Trigger: TCCTTCACCTTCTGTCATGATTTTGAGGCCTCCCCAGCCATGTGGAACTGTGAGTCCATTAAACCTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 72 bp TGTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTaGGGGAGGATGTATCTTATAAAGTACATTCACAAG +
Preference number: 3 (lower is better)
Translates to: CHKGQWQGTFTR*GRMYLIKYIHK
Trigger: CTTGTGAATGTACTTTATAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp GAAACAAGAGAGATAACCTTAAATTCTGACCGCCGGTaGGCCAGGTGGAACAAAGCCACATTTCTCTTCTTT +
Preference number: 3 (lower is better)
Translates to: ETREITLNSDRR*ARWNKATFLFF
Trigger: AAAGAAGAGAAATGTGGCTTTGTTCCACCTGGCTCACCGGCGGTCAGAATTTAAGGTTATCTCTCTTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp CAATGTTTAGGAAACAAGAGAGATAACCTTAAATTCTaGCCGCCGGTGAGCCAGGTGGAACAAAGCCACATT +
Preference number: 3 (lower is better)
Translates to: QCLGNKRDNLKF*PPVSQVEQSHI
Trigger: AATGTGGCTTTGTTCCACCTGGCTCACCGGCGGTCAGAATTTAAGGTTATCTCTCTTGTTTCCTAAACATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGCAGGTAACCATGATGTaGTATTCAGAACCTGTAGGT +
Preference number: 3 (lower is better)
Translates to: SFCHQICLIACVTMHFLLQVTMM*YSEPVG
Trigger: ACCTACAGGTTCTGAATACAACATCATGGTTACCTG...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTATTAGCAGAAGCCTCTaGAGGATGGACTTGCAAACC +
Preference number: 3 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSISRSL*RMDLQT
Trigger: GGTTTGCAAGTCCATCCTCAAGAGGCTTCTGCTAAT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp AACTTCATTAGCAATTTTAATTTCACCTTGGTCCTGTaGTCTCGCCCTGCCTCCACTTGCCTTGTGATATTC +
Preference number: 3 (lower is better)
Translates to: NFISNFNFTLVL*SRPASTCLVIF
Trigger: GAATATCACAAGGCAAGTGGAGGCAGGGCGAGATCACAGGACCAAGGTGAAATTAAAATTGCTAATGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTAAGGACATATTCCTGTaGCAGATAACAAGCCAGAGC +
Preference number: 3 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSKDIFL*QITSQS
Trigger: GCTCTGGCTTGTTATCTGCAACAGGAATATGTCCTT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp ACTGCTCAAGGCATTCCTAAACCACAAACAATAGCATaGGTGATTTGTGCCTTAAGGACATATTCCTGTTGC +
Preference number: 3 (lower is better)
Translates to: TAQGIPKPQTIA*VICALRTYSCC
Trigger: GCAACAGGAATATGTCCTTAAGGCACAAATCACTCATGCTATTGTTTGTGGTTTAGGAATGCCTTGAGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp GGACTGGCTGAAGCCATGGCAGAAAAACATGGATTGTaGAGGTTTCATGGACATTTATTAGTTCCCCAAATT +
Preference number: 3 (lower is better)
Translates to: GLAEAMAEKHGL*RFHGHLLVPQI
Trigger: AATTTGGGGAACTAATAAATGTCCATGAAACCTTCACAATCCATGTTTTTCTGCCATGGCTTCAGCCAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CCA 72 bp ATAAGGTTGGTAAGGGTTATTCTGGTGAGGTGTCATTaGGGAATGAGGAACATGCTATTGGGAAATGAAGAA +
Preference number: 3 (lower is better)
Translates to: IRLVRVILVRCH*GMRNMLLGNEE
Trigger: TTCTTCATTTCCCAATAGCATGTTCCTCATTCCCCAATGACACCTCACCAGAATAACCCTTACCAACCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCCAGGTAACCATGATGTaGTATTCAGAACCTGTAGGT +
Preference number: 3 (lower is better)
Translates to: AILTEVRRETGLYYKRHCQVTMM*YSEPVG
Trigger: ACCTACAGGTTCTGAATACAACATCATGGTTACCTG...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTAAGCTGGAAATAAGGTaGGTAAGGGTTATTCTGGTG +
Preference number: 3 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSKLEIR*VRVILV
Trigger: CACCAGAATAACCCTTACCAACCTTATTTCCAGCTT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAGAATTTTGGGGGTCATaGTTCAGTCCAAAGTACTTA +
Preference number: 3 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQEFWGS*FSPKYL
Trigger: TAAGTACTTTGGACTGAACAATGACCCCCAAAATTC...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR-3UTR CAA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTTGTGAGAATATAAATTaGTGTTTTGGGCCAGATACG +
Preference number: 3 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSCENIN*CFGPDT
Trigger: CGTATCTGGCCCAAAACACAAATTTATATTCTCACA...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR GCA 72 bp AAAGATACGAATGAGCCAGAGCCAACCTTATATTCCTaGAGTAAATGCCACTGGGTTTACTATTTTCTTATC +
Preference number: 3 (lower is better)
Translates to: KDTNEPEPTLYS*SKCHWVYYFLI
Trigger: GATAAGAAAATAGTAAACCCAGTGGCATTTACTGCAGGAATATAAGGTTGGCTCTGGCTCATTCGTATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp GCATGTGTGTTTGAGCAATATGAAATCTGGGCACCTTaGAAAAAGAACAGGATAACAGCAATGTTTAGGAAA +
Preference number: 3 (lower is better)
Translates to: ACVFEQYEIWAP*KKNRITAMFRK
Trigger: TTTCCTAAACATTGCTGTTATCCTGTTCTTTTTTCAAGGTGCCCAGATTTCATATTGCTCAAACACACATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp GGAAATGAAGAAAAGACAACCCTTGATATAAAGTGGTaGAGAACTTGGCAGAACTGTATTCTAGCATTTTAC +
Preference number: 3 (lower is better)
Translates to: GNEEKTTLDIKW*RTWQNCILAFY
Trigger: GTAAAATGCTAGAATACAGTTCTGCCAAGTTCTTCACCACTTTATATCAAGGGTTGTCTTTTCTTCATTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR GCA 72 bp AGGAGGATGTATATTACCTCAGGACCCTGTAATAATTaGATTAACTGCACAAATTATACAGCATGTGTGTTT +
Preference number: 3 (lower is better)
Translates to: RRMYITSGPCNN*INCTNYTACVF
Trigger: AAACACACATGCTGTATAATTTGTGCAGTTAATGCAATTATTACAGGGTCCTGAGGTAATATACATCCTCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR TCA 72 bp CCTGTCCCTTTCTTTCTCATAAGGAATACTTATAGCTaGTCTACAATCTATAGGAATAATGTTTATCACAGG +
Preference number: 3 (lower is better)
Translates to: PVPFFLIRNTYS*STIYRNNVYHR
Trigger: CCTGTGATAAACATTATTCCTATAGATTGTAGATCAGCTATAAGTATTCCTTATGAGAAAGAAAGGGACAGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTCTGGTCTCGAACTCCTaGCCTCAGGTGACCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPLVSNS*PQVTPC
Trigger: GCAGGGGGTCACCTGAGGTCAGGAGTTCGAGACCAG...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTTTGCCCAGGCTGCAGTaGAATGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPLPRLQ*NGVISA
Trigger: AGCCGAGATCACGCCATTGCACTGCAGCCTGGGCAA...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTAGGGCAAGCAACACCTaGCCCACCCAGGGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPRASNT*PTQGRK
Trigger: TTTTCTGCCCTGGGTGGGCCAGGTGTTGCTTGCCCT...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAAGCCTCCCAAGCGGCTaGGATTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQSLPSG*DYRRPP
Trigger: TGGCGGGCGCCTGTAATCCCAGCCGCTTGGGAGGCT...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTACCACAGGGTGTCACTaGGCCTCTGTCAAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPTTGCH*ASVKEP
Trigger: AGGCTCCTTGACAGAGGCCCAGTGACACCCTGTGGT...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTCCTCAGGTGACCCCCTaGCTTGACCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSPQVTP*LDLPKC
Trigger: GCACTTTGGGAGGTCAAGGCAGGGGGTCACCTGAGG...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CAA 72 bp CACTGCAGCCTTTACTTCCTGGGCTCAAGCAGTCCTTaGCCTGAGTACCAGGGACTACATACGTGCACCACC +
Preference number: 4 (lower is better)
Translates to: HCSLYFLGSSSP*PEYQGLHTCTT
Trigger: GGTGGTGCACGTATGTAGTCCCTGGTACTCAGGCAAAGGACTGCTTGAGCCCAGGAAGTAAAGGCTGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTAGGCAGGAGAATCACTaGAACTCAGGAGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPRQENH*NSGGGG
Trigger: ACCTCCACCTCCTGAGTTCCAGTGATTCTCCTGCCT...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTCAGGCTGGAGTGCCGTaGCGCAATATCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSQAGVP*RNISSL
Trigger: CAGTGAGCTGATATTGCGCCACGGCACTCCAGCCTG...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAATTGTACAGGGTTATCTaGGGCCCACAGCGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQLYRVI*GPQRGG
Trigger: TCCACCCCGCTGTGGGCCTCAGATAACCCTGTACAA...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTATGGTCTTGATCTCTTaGCCTCATGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPMVLIS*PHDLPA
Trigger: GGCAGGCAGATCATGAGGTCAAGAGATCAAGACCAT...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGCACTCCAGCCTAGGTaGCATGGCAAGACACTGTCT +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSALQPR*HGKTLS
Trigger: AGACAGTGTCTTGCCATGTCACCTAGGCTGGAGTGC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTAAGCAGTCCTTTGCCTaGGTACCAGGGACTACATAC +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPKQSFA*VPGTTY
Trigger: GTATGTAGTCCCTGGTACTCAGGCAAAGGACTGCTT...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAAGGGCAAGCAACACCTaGCCCACCCAGGGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQRASNT*PTQGRK
Trigger: TTTTCTGCCCTGGGTGGGCCAGGTGTTGCTTGCCCT...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAGTGAGCCACCGTGCCTaGCCGAGACTGGGTAAGTTA +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQVSHRA*PRLGKL
Trigger: TAACTTACCCAGTCTCGGCCAGGCACGGTGGCTCAC...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAACTGAGGTCAGGAGTTTaGGACCAGCCTGGCCAACTT +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQLRSGV*DQPGQL
Trigger: AAGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAG...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGACTCCTGACCTCAGGTaGCCCCCTGCCTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLTPDLR*PPALTS
Trigger: GGAGGTCAAGGCAGGGGGTCACCTGAGGTCAGGAGT...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTTTTCCCAGTGGGTCCTaGAGAACCACAGTTTATTGG +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPFPSGS*RTTVYW
Trigger: CCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAA...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTACTGCCCTCAAACTCCTaGGCTCAAGCGATCATCCTT +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILLPSNS*AQAIIL
Trigger: AAGGATGATCGCTTGAGCTCAGGAGTTTGAGGGCAG...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGATGTCACAATGGCTTaGCCATGGTATGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSDVTMA*PWYGQL
Trigger: GAGCTGGCCATACCATGGTCAAGCCATTGTGACATC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTGGGGGTTCACCATGTTaGCCAAAATGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPGGSPC*PKWSQS
Trigger: AGATTGAGACCATTTTGGGCAACATGGTGAACCCCC...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTACCAGGAATTGGAGGTTaGAGTGAGCTGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILPGIGG*SELRSR
Trigger: GCGTGATCTCAGCTCACTGCAACCTCCAATTCCTGG...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGCTCAAGCAGTCCTTTaGCTGAGTACCAGGGACTAC +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSAQAVL*LSTRDY
Trigger: GTAGTCCCTGGTACTCAGGCAAAGGACTGCTTGAGC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAAGGCAGGAGAATCACTaGAACTCAGGAGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILRQENH*NSGGGG
Trigger: ACCTCCACCTCCTGAGTTCCAGTGATTCTCCTGCCT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAACACTGTCACCAGGCTaGAGTGCCGTGGCGCAATAT +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQTLSPG*SAVAQY
Trigger: ATATTGCGCCACGGCACTCCAGCCTGGTGACAGTGT...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTCCAAACCATATCAGCTaGCAACTTGCTTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPPNHIS*QLACSS
Trigger: TGAGCTGCAAGCAAGTTGCCAGCTGATATGGTTTGG...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGGCATGAGAATTACTTaGACAGCATGGGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILGMRIT*TAWGNP
Trigger: GGGGTTTCCCCATGCTGTTCAAGTAATTCTCATGCC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGGCAGGAGAATCACTTaGACCCAGGAATTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSGRRIT*TQELEV
Trigger: AACCTCCAATTCCTGGGTTCAAGTGATTCTCCTGCC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTGGGCTGGGATCAATCTaGATGATTTATCTCGTACAG +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPGLGSI*MIYLVQ
Trigger: CTGTACGAGATAAATCATGCAGATTGATCCCAGCCC...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAACTTGACCTCATGATCTaGCTGCCTCAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQLDLMI*LPQPPK
Trigger: TTTGGGAGGCTGAGGCAGGCAGATCATGAGGTCAAG...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAATATCCCAGGCTGGAGTaGAGTGGTGTGATCTCGGTT +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQYPRLE*SGVISV
Trigger: AACCGAGATCACACCACTGCACTCCAGCCTGGGATA...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAATTGCCCAGGCTGGAATaGAGTGGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQLPRLE*SGMILA
Trigger: AGCCAAGATCATGCCACTGCATTCCAGCCTGGGCAA...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAACCAGGAATTGGAGGTTaGAGTGAGCTGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQPGIGG*SELRSR
Trigger: GCGTGATCTCAGCTCACTGCAACCTCCAATTCCTGG...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTGAAAACATGAGGAAGTaGGCACTTACATGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPENMRK*ALTCQE
Trigger: TTCCTGGCATGTAAGTGCCCACTTCCTCATGTTTTC...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCAGCCTCCCAAGCGGCTaGGATTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCSLPSG*DYRRPP
Trigger: TGGCGGGCGCCTGTAATCCCAGCCGCTTGGGAGGCT...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAACAGGCTGGAGTGCAGTaGCAAGAACTCAACTCACTG +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQQAGVQ*QELNSL
Trigger: CAGTGAGTTGAGTTCTTGCCACTGCACTCCAGCCTG...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGGCCTCCCACATTGTTaGCATTACAACTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSGLPHC*HYNCEP
Trigger: TGGCTCACAGTTGTAATGCCAACAATGTGGGAGGCC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAATGGCCAGGATGGTCTTaGTCTCTTGACCTCATGATC +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQWPGWS*SLDLMI
Trigger: GATCATGAGGTCAAGAGATCAAGACCATCCTGGCCA...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAGGCATGAGAATTACTTaGACAGCATGGGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQGMRIT*TAWGNP
Trigger: GGGGTTTCCCCATGCTGTTCAAGTAATTCTCATGCC...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTAATCATGACAGAAGGTaGAGGAGGAGCAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSNHDRR*RRSKGT
Trigger: TGTGCCTTTGCTCCTCCTTCACCTTCTGTCATGATT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAAAGCAGTCCTTTGCCTaGGTACCAGGGACTACATAC +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQKQSFA*VPGTTY
Trigger: GTATGTAGTCCCTGGTACTCAGGCAAAGGACTGCTT...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTGGAGCCTATTCTTTCTaGCACCAGATCTGTCTAATA +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPGAYSF*HQICLI
Trigger: TATTAGACAGATCTGGTGGCAGAAAGAATAGGCTCC...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGAGATCTCTCTATGTTaGCTAGGCTGCCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILEISLC*LGCPQT
Trigger: AGTTTGAGGGCAGCCTAGGCAACATAGAGAGATCTC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAATCTCCACGACCCAGCTaGTCTCGGCAAAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQSPRPS*SRQKCK
Trigger: TTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGA...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTCTAATAAAAACTTGCTaGTTTTTGCGGCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPLIKTC*FLRLVG
Trigger: CCCCACAAGCCGCAAAAACCAGCAAGTTTTTATTAG...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTACTGATCTTGAACTCCTaGCCTCAAGGAATCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILLILNS*PQGILL
Trigger: CAGAAGGATTCCTTGAGGCCAGGAGTTCAAGATCAG...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAGGTGTCATTGGGGAATaGGGAACATGCTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQGVIGE*GTCYWE
Trigger: TTCCCAATAGCATGTTCCTCATTCCCCAATGACACC...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGACCATGCTGGCACTCTaGTCTCAGACTTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLTMLAL*SQTSSL
Trigger: GAGGCTGGAAGTCTGAGATCAGAGTGCCAGCATGGT...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAAGCAAGGAACATCCTTaGGAAAGAGAATGCACACCT +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILSKEHP*ERECTP
Trigger: AGGTGTGCATTCTCTTTCTCAAGGATGTTCCTTGCT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTAGCTACTCGGGAGGCTaGGGCAGGAGAACCACTGGA +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSSYSGG*GRRTTG
Trigger: TCCAGTGGTTCTCCTGCCTCAGCCTCCCGAGTAGCT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAACTCCTTTCAAAGTGTTaGGACTCCAGGCATAAGCCA +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQLLSKC*DSRHKP
Trigger: TGGCTTATGCCTGGAGTCTCAACACTTTGAAAGGAG...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAACAGGTCTCGAACTCCTaGGCTCAAGTAATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQQVSNS*AQVILL
Trigger: CAAAAGGATTACTTGAGCTCAGGAGTTCGAGACCTG...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTACCCCGATTCCCACTCTaGACTATATTTCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILPRFPL*TIFLCL
Trigger: AAGACACAGAAATATAGTGCAGAGTGGGAATCGGGG...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAACTTGGCCTCCCAAAGTaGTGTGATTACAGACATCAG +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQLGLPK*CDYRHQ
Trigger: CTGATGTCTGTAATCACAGCACTTTGGGAGGCCAAG...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAGGGGGTTCACCATGTTaGCCAAAATGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQGGSPC*PKWSQS
Trigger: AGATTGAGACCATTTTGGGCAACATGGTGAACCCCC...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTAGGCATAAGCCACTTTaGCCAGTTGCTACTATTATA +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPRHKPL*PVATII
Trigger: TATAATAGTAGCAACTGGGCAAAGTGGCTTATGCCT...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAGAGATCTCTCTATGTTaGCTAGGCTGCCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQEISLC*LGCPQT
Trigger: AGTTTGAGGGCAGCCTAGGCAACATAGAGAGATCTC...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTTCATCATACGAATTTTaGGGGTCATTGTTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPSSYEF*GSLFSP
Trigger: TGGACTGAACAATGACCCCCAAAATTCGTATGATGA...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAACCAAACCATATCAGCTaGCAACTTGCTTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQPNHIS*QLACSS
Trigger: TGAGCTGCAAGCAAGTTGCCAGCTGATATGGTTTGG...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGTATCATCACAAGGGTaGGGAGGAAGGTTACAAAGT +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILVSSQG*GGRLQS
Trigger: ACTTTGTAACCTTCCTCCCCACCCTTGTGATGATAC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CAA 72 bp TTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTaGTGGGCAAAGGGGTATGTGTATCAGTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: FPVGPEEPQFIG*WAKGYVYQLAF
Trigger: AAAGGCCAACTGATACACATACCCCTTTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CAA 72 bp AGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATaGGCTTGTGGGCAAAGGGGTATGTGTATCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RISQWVLKNHSL*ACGQRGMCISW
Trigger: CCAACTGATACACATACCCCTTTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCTTGTACAGGGTTATCTaGGGCCCACAGCGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCLYRVI*GPQRGG
Trigger: TCCACCCCGCTGTGGGCCTCAGATAACCCTGTACAA...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTACCACAAACAATAGCATaGGTGATTTGTGCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILPQTIA*VICALR
Trigger: CCTTAAGGCACAAATCACTCATGCTATTGTTTGTGG...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGCCATAAACAGGCAATaGGAAACTGGCCATAAACAA +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSAINRQ*ETGHKQ
Trigger: TTGTTTATGGCCAGTTTCTCATTGCCTGTTTATGGC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTTATGGTTGTCTGAGCTaGCTAAGGCAGATATTGGTA +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSYGCLS*LRQILV
Trigger: TACCAATATCTGCCTTAGTCAGCTCAGACAACCATA...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAATCGAGACTGCAGGGGTaGAATAGACCCCAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQSRLQG*NRPQSP
Trigger: GGGAGACTGGGGTCTATTTCACCCCTGCAGTCTCGA...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCCTGGTCTCGAACTCCTaGCCTCAGGTGACCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFLVSNS*PQVTPC
Trigger: GCAGGGGGTCACCTGAGGTCAGGAGTTCGAGACCAG...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAGTTGTTGTTACAGTGTaGGCCACCGTGCCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQVVVTV*ATVPGR
Trigger: TCGGCCAGGCACGGTGGCTCACACTGTAACAACAAC...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAGCTGATGGTGAGATGTaGCTCAATGCTGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQADGEM*LNAVFL
Trigger: AAGAAAGACAGCATTGAGGCACATCTCACCATCAGC...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATGGTCTCGGCAAAAATaGAAAAGGAGACCTGAATTG +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILWSRQK*KRRPEL
Trigger: CAATTCAGGTCTCCTTTTGCATTTTTGCCGAGACCA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCTTGCCCAGGCTGCAGTaGAATGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCLPRLQ*NGVISA
Trigger: AGCCGAGATCACGCCATTGCACTGCAGCCTGGGCAA...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGTATCCCAGGCTGGAGTaGAGTGGTGTGATCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLYPRLE*SGVISV
Trigger: AACCGAGATCACACCACTGCACTCCAGCCTGGGATA...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGGCTCAAGCAGTCCTTTaGCTGAGTACCAGGGACTAC +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLAQAVL*LSTRDY
Trigger: GTAGTCCCTGGTACTCAGGCAAAGGACTGCTTGAGC...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTCTGTCAATAAATATGTaGGTCAAACTCTGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPLSINM*VKLCSS
Trigger: GCTTGAACAGAGTTTGACCCACATATTTATTGACAG...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATGCGGTATTCTCTTATaGTTGTCTGAGCTGACTAAG +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILCGILL*LSELTK
Trigger: CTTAGTCAGCTCAGACAACCATAAGAGAATACCGCA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTACTAATAAAAACTTGCTaGTTTTTGCGGCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILLIKTC*FLRLVG
Trigger: CCCCACAAGCCGCAAAAACCAGCAAGTTTTTATTAG...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTGAGTGGGCCTGGTTCTaGAGGATTTCCCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSEWAWF*RISQWV
Trigger: GACCCACTGGGAAATCCTCCAGAACCAGGCCCACTC...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAGAGTGGGCCTGGTTCTaGAGGATTTCCCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQEWAWF*RISQWV
Trigger: GACCCACTGGGAAATCCTCCAGAACCAGGCCCACTC...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTACACCATGGGGATTATaGGAGCTACAATTCAAGATG +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSTPWGL*ELQFKM
Trigger: CATCTTGAATTGTAGCTCCCATAATCCCCATGGTGT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAAAGGCACATCTTATATaGCAGAAGGCAAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQKAHLI*QKAREP
Trigger: AGGCTCTCTTGCCTTCTGCCATATAAGATGTGCCTT...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGGCGATCATCCTTCCTTaGCCTCCCACATTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLAIILP*PPTLLA
Trigger: TGCCAACAATGTGGGAGGCCAAGGAAGGATGATCGC...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTATAGTGGCATTATCATaGCTCACTGCAGCCTTTACT +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSIVALS*LTAAFT
Trigger: AGTAAAGGCTGCAGTGAGCCATGATAATGCCACTAT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATGGGATCAATCTGCATaGTTTATCTCGTACAGAACT +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILWDQSA*FISYRT
Trigger: AGTTCTGTACGAGATAAATCATGCAGATTGATCCCA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAGCTTCTGGTAAATTTTaGCATGAATGTGCCACACTG +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQASGKF*HECATL
Trigger: CAGTGTGGCACATTCATGTCAAAATTTACCAGAAGC...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTACTTGATATAAAGTGGTaGAGAACTTGGCAGAACTGT +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILLDIKW*RTWQNC
Trigger: ACAGTTCTGCCAAGTTCTTCACCACTTTATATCAAG...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTCCCCCAAATTTCATATaGAGTTCCAAACCTCAATGT +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSPPNFI*SSKPQC
Trigger: ACATTGAGGTTTGGAACTTCATATGAAATTTGGGGG...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTTCGAGACTGCAGGGGTaGAATAGACCCCAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISSRLQG*NRPQSP
Trigger: GGGAGACTGGGGTCTATTTCACCCCTGCAGTCTCGA...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTAATTCTGACCGCCGGTaGGCCAGGTGGAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISNSDRR*ARWNKA
Trigger: GGCTTTGTTCCACCTGGCTCACCGGCGGTCAGAATT...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGAAATCTGGGCACCTTaGAAAAAGAACAGGATAACA +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILEIWAP*KKNRIT
Trigger: TGTTATCCTGTTCTTTTTTCAAGGTGCCCAGATTTC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCAGCTACTCGGGAGGCTaGGGCAGGAGAACCACTGGA +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFSYSGG*GRRTTG
Trigger: TCCAGTGGTTCTCCTGCCTCAGCCTCCCGAGTAGCT...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTTCTAGCTCAGGAGTTTaGGGACAGCCTGGGCAATGG +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSSSSGV*GQPGQW
Trigger: CCATTGCCCAGGCTGTCCTCAAACTCCTGAGCTAGA...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCTCTAGCTCAGGAGTTTaGGGACAGCCTGGGCAATGG +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCSSSGV*GQPGQW
Trigger: CCATTGCCCAGGCTGTCCTCAAACTCCTGAGCTAGA...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGGTGGTTTCGCTATGTTaGCCAGGCTGGTTTGAACTC +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLVVSLC*PGWFEL
Trigger: GAGTTCAAACCAGCCTGGGCAACATAGCGAAACCAC...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTACCTCAGGTGACCCCCTaGCTTGACCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVPQVTP*LDLPKC
Trigger: GCACTTTGGGAGGTCAAGGCAGGGGGTCACCTGAGG...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAATTCAAGCAATTCTCCTaGCTCAGCCTCCCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQFKQFS*LSLPSG
Trigger: GCCGCTTGGGAGGCTGAGGCAGGAGAATTGCTTGAA...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAGGAGCCTATTCTTTCTaGCACCAGATCTGTCTAATA +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQGAYSF*HQICLI
Trigger: TATTAGACAGATCTGGTGGCAGAAAGAATAGGCTCC...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAATTCACTGTAACCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQFTVTS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGGTTACAGTGAA...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTTATTCCTGCAGTAAATaGCACTGGGTTTACTATTTT +
Preference number: 4 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPYSCSK*HWVYYF
Trigger: AAAATAGTAAACCCAGTGGCATTTACTGCAGGAATA...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGCTGGTGGTACATGCCTaGATTCCCAGCTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLLVVHA*IPSYSE
Trigger: TTCTGAGTAGCTGGGAATGCAGGCATGTACCACCAG...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTACATGAGTGGGATTCATaGACTATATCAGCCATCTTA +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILHEWDS*TISAIL
Trigger: TAAGATGGCTGATATAGTCCATGAATCCCACTCATG...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAGGAGGCCAAGGCAGGTaGATCACCAAAGGTCAGATC +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQGGQGR*ITKGQI
Trigger: GATCTGACCTTTGGTGATCCACCTGCCTTGGCCTCC...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATATAAATTTGTGTTTTaGGCCAGATACGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VTRANGRVHSLGGGGCILYKFVF*ARYGGS
Trigger: TGAGCCACCGTATCTGGCCCAAAACACAAATTTATA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTTCATCATACGAATTTTaGGGGTCATTGTTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSSSYEF*GSLFSP
Trigger: TGGACTGAACAATGACCCCCAAAATTCGTATGATGA...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAATGCACACCTGGGAGTaGGTCTCTGAACTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVMHTWE*VSELAP
Trigger: GGGGGCCAGTTCAGAGACCCACTCCCAGGTGTGCAT...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGAAGAGAATGCACACCTaGGAGTGGGTCTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLKRMHT*EWVSEL
Trigger: CAGTTCAGAGACCCACTCCCAGGTGTGCATTCTCTT...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAACCATGTTGGCTGGGCTaGTCTCGAACTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQPCWLG*SRTLDL
Trigger: GAGGTCAAGAGTTCGAGACCAGCCCAGCCAACATGG...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTAAACCAAAGTTGTGCTaGTTTCTACTGGTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSKPKLC*FLLVKA
Trigger: TGCTTTGACCAGTAGAAACCAGCACAACTTTGGTTT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAACACTGTCACCAGGCTaGAGTGCCGTGGCGCAATAT +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQTLSPG*SAVAQY
Trigger: ATATTGCGCCACGGCACTCCAGCCTGGTGACAGTGT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAGTGAGCCACTCTGCTTaGCCCTTTATTCTTTTACAT +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQVSHSA*PFILLH
Trigger: ATGTAAAAGAATAAAGGGCCAAGCAGAGTGGCTCAC...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGGGCCTCCCACATTGTTaGCATTACAACTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLGLPHC*HYNCEP
Trigger: TGGCTCACAGTTGTAATGCCAACAATGTGGGAGGCC...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAATAGTGGCATTATCATaGCTCACTGCAGCCTTTACT +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQIVALS*LTAAFT
Trigger: AGTAAAGGCTGCAGTGAGCCATGATAATGCCACTAT...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGTGTCACAAGGGCCAATaGCAGGGTACATTCACTAGG +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLCHKGQ*QGTFTR
Trigger: CCTAGTGAATGTACCCTGCCATTGGCCCTTGTGACA...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CAA 72 bp AGCCTATTCTTTCTGCCACCAGATCTGTCTAATAGCTaGTGTGACAATGCACTTCCTTCTGGGTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SLFFLPPDLSNS*CDNALPSGSLS
Trigger: GGAGAGAGACCCAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGAATAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTATTGTACAGGGTTATCTaGGGCCCACAGCGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVLYRVI*GPQRGG
Trigger: TCCACCCCGCTGTGGGCCTCAGATAACCCTGTACAA...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293648.8
ENST00000453372.7
ENST00000590155.5
CDS-3UTR TCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGAGTGTGAGGAAGTTGTaGTGGCTCTCTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLSVRKL*WLSHIP
Trigger: AGGAATGTGAGAGAGCCATCACAACTTCCTCACACT...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCCTCCACCTCCCAGGTTaGAGTGATTCTCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCLHLPG*SDSPIS
Trigger: TGAGATGGGAGAATCACTTCAACCTGGGAGGTGGAG...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAGTTGTTGTTACAGTGTaGGCCACCGTGCCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVVVVTV*ATVPGR
Trigger: TCGGCCAGGCACGGTGGCTCACACTGTAACAACAAC...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAACTGCCCTCAAACTCCTaGGCTCAAGCGATCATCCTT +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQLPSNS*AQAIIL
Trigger: AAGGATGATCGCTTGAGCTCAGGAGTTTGAGGGCAG...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTTTGAGATCACACCATTaGACTCCAGCCTGGGCAACG +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSLRSHH*TPAWAT
Trigger: CGTTGCCCAGGCTGGAGTGCAATGGTGTGATCTCAA...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCTTGACCTCATGATCTaGCTGCCTCAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSLDLMI*LPQPPK
Trigger: TTTGGGAGGCTGAGGCAGGCAGATCATGAGGTCAAG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAATGCAAACCAAAGTTGTaGTGGTTTCTACTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQCKPKL*WFLLVK
Trigger: TTTGACCAGTAGAAACCAGCACAACTTTGGTTTGCA...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCTTGCCCAGGCTGGAATaGAGTGGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCLPRLE*SGMILA
Trigger: AGCCAAGATCATGCCACTGCATTCCAGCCTGGGCAA...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAATATAAATTTGTGTTTTaGGCCAGATACGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: WRISQWVLKNHSLLACGQYKFVF*ARYGGS
Trigger: TGAGCCACCGTATCTGGCCCAAAACACAAATTTATA...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCAGGCTGGAGTGCAGTaGCAAGAACTCAACTCACTG +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSQAGVQ*QELNSL
Trigger: CAGTGAGTTGAGTTCTTGCCACTGCACTCCAGCCTG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAACCACAGGGTGTCACTaGGCCTCTGTCAAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVTTGCH*ASVKEP
Trigger: AGGCTCCTTGACAGAGGCCCAGTGACACCCTGTGGT...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTACAGGCTGGAGTGCCGTaGCGCAATATCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVQAGVP*RNISSL
Trigger: CAGTGAGCTGATATTGCGCCACGGCACTCCAGCCTG...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCTATTACCTCCCACCTaGTCTCTCCCTCGACACCAT +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSLLPPT*SLPRHH
Trigger: ATGGTGTCGAGGGAGAGACCAGGTGGGAGGTAATAG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAACTATTACCTCCCACCTaGTCTCTCCCTCGACACCAT +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQLLPPT*SLPRHH
Trigger: ATGGTGTCGAGGGAGAGACCAGGTGGGAGGTAATAG...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCGTGAGCCACCGTGCCTaGCCGAGACTGGGTAAGTTA +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFVSHRA*PRLGKL
Trigger: TAACTTACCCAGTCTCGGCCAGGCACGGTGGCTCAC...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGGTCATCCTAGCATTTTaGGAGGCTGATGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLVILAF*EADAEG
Trigger: TCCTTCTGCATCAGCCTCCCAAAATGCTAGGATGAC...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTGCGATCATCCTTCCTTaGCCTCCCACATTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSAIILP*PPTLLA
Trigger: TGCCAACAATGTGGGAGGCCAAGGAAGGATGATCGC...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAACCATGCTGGCACTCTaGTCTCAGACTTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVTMLAL*SQTSSL
Trigger: GAGGCTGGAAGTCTGAGATCAGAGTGCCAGCATGGT...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTCAATGTGACTGTATGTaGAAAGAGAAGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISQCDCM*KEKGAG
Trigger: CCCCGCCCCCTTCTCTTTTCACATACAGTCACATTG...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAAATTCTGACCGCCGGTaGGCCAGGTGGAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRNSDRR*ARWNKA
Trigger: GGCTTTGTTCCACCTGGCTCACCGGCGGTCAGAATT...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCTGGGATTAAAAGTGTaGGCCACTATGACCAGCCAG +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSLGLKV*ATMTSQ
Trigger: CTGGCTGGTCATAGTGGCTCACACTTTTAATCCCAG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCCTGGGATTAAAAGTGTaGGCCACTATGACCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCLGLKV*ATMTSQ
Trigger: CTGGCTGGTCATAGTGGCTCACACTTTTAATCCCAG...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAATGGTCTTGATCTCTTaGCCTCATGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQMVLIS*PHDLPA
Trigger: GGCAGGCAGATCATGAGGTCAAGAGATCAAGACCAT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCCTCCCAAAGTGCTGTaGTTACAGACATCAGCCACT +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSPPKVL*LQTSAT
Trigger: AGTGGCTGATGTCTGTAATCACAGCACTTTGGGAGG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTACTCAATCTGACCTTGTaGTCCACCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVLNLTL*STCLSL
Trigger: GAGGCTGAGGCAGGTGGATCACAAGGTCAGATTGAG...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTTTGGCATTACAACTGTaGGCCACTCTGCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISLALQL*ATLLGP
Trigger: AGGGCCAAGCAGAGTGGCTCACAGTTGTAATGCCAA...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTGATGTCACAATGGCTTaGCCATGGTATGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISDVTMA*PWYGQL
Trigger: GAGCTGGCCATACCATGGTCAAGCCATTGTGACATC...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGGCTGATGGTGAGATGTaGCTCAATGCTGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLADGEM*LNAVFL
Trigger: AAGAAAGACAGCATTGAGGCACATCTCACCATCAGC...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAGTGGTTTCGCTATGTTaGCCAGGCTGGTTTGAACTC +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQVVSLC*PGWFEL
Trigger: GAGTTCAAACCAGCCTGGGCAACATAGCGAAACCAC...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTTGGGAGTATGAGGCATaGAGATCACCTGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISWEYEA*RSPEVR
Trigger: CCTGACCTCAGGTGATCTGCATGCCTCATACTCCCA...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAATTCAAGAGATTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAATCTCTTGAA...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTATTCAAGCAATTCTCCTaGCTCAGCCTCCCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVFKQFS*LSLPSG
Trigger: GCCGCTTGGGAGGCTGAGGCAGGAGAATTGCTTGAA...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTATTCACTGTAACCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVFTVTS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGGTTACAGTGAA...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTTCTCCACGACCCAGCTaGTCTCGGCAAAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSSPRPS*SRQKCK
Trigger: TTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGA...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCCCATGTTGGCTGGGCTaGTCTCGAACTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFPCWLG*SRTLDL
Trigger: GAGGTCAAGAGTTCGAGACCAGCCCAGCCAACATGG...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCATCAGCCAGGCAAGGTaGAGGCTGTCTGTAATCTCA +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCISQAR*RLSVIS
Trigger: TGAGATTACAGACAGCCTCCACCTTGCCTGGCTGAT...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCTGTCACAAGGGCCAATaGCAGGGTACATTCACTAGG +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCCHKGQ*QGTFTR
Trigger: CCTAGTGAATGTACCCTGCCATTGGCCCTTGTGACA...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CAA 72 bp AGCATGAGTGATTTGTGCCTTAAGGACATATTCCTGTaGCAGATAACAAGCCAGAGCCTGTCCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SMSDLCLKDIFL*QITSQSLSLSF
Trigger: GAAAGAAAGGGACAGGCTCTGGCTTGTTATCTGCAACAGGAATATGTCCTTAAGGCACAAATCACTCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTAGTGTGAGGAAGTTGTaGTGGCTCTCTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSSVRKL*WLSHIP
Trigger: AGGAATGTGAGAGAGCCATCACAACTTCCTCACACT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTGGTGTCATTGGGGAATaGGGAACATGCTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSGVIGE*GTCYWE
Trigger: TTCCCAATAGCATGTTCCTCATTCCCCAATGACACC...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCCAATGTGACTGTATGTaGAAAGAGAAGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFQCDCM*KEKGAG
Trigger: CCCCGCCCCCTTCTCTTTTCACATACAGTCACATTG...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTAGAAAAGAACCTATGTaGATATCGGGGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSRKEPM*ISGLVP
Trigger: GGGAACCAGCCCCGATATTCACATAGGTTCTTTTCT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTTGGCCAGGATGGTCTTaGTCTCTTGACCTCATGATC +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISWPGWS*SLDLMI
Trigger: GATCATGAGGTCAAGAGATCAAGACCATCCTGGCCA...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTTTTCCCAGTGGGTCCTaGAGAACCACAGTTTATTGG +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSFPSGS*RTTVYW
Trigger: CCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAA...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCCTCCACCTCCCAGGTTaGAGTGATTCTCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFLHLPG*SDSPIS
Trigger: TGAGATGGGAGAATCACTTCAACCTGGGAGGTGGAG...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTAATCATGACAGAAGGTaGAGGAGGAGCAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSNHDRR*RRSKGT
Trigger: TGTGCCTTTGCTCCTCCTTCACCTTCTGTCATGATT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTGAGGCCTCAAAATCATaGCAGAAGGTGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISEASKS*QKVKEE
Trigger: CTCCTCCTTCACCTTCTGTCATGATTTTGAGGCCTC...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACTCAATCTGACCTTGTaGTCCACCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRLNLTL*STCLSL
Trigger: GAGGCTGAGGCAGGTGGATCACAAGGTCAGATTGAG...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAACTCCTTTCAAAGTGTTaGGACTCCAGGCATAAGCCA +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQLLSKC*DSRHKP
Trigger: TGGCTTATGCCTGGAGTCTCAACACTTTGAAAGGAG...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCAGGTCTCGAACTCCTaGGCTCAAGTAATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSQVSNS*AQVILL
Trigger: CAAAAGGATTACTTGAGCTCAGGAGTTCGAGACCTG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAGCACTCCAGCCTAGGTaGCATGGCAAGACACTGTCT +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRALQPR*HGKTLS
Trigger: AGACAGTGTCTTGCCATGTCACCTAGGCTGGAGTGC...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCTTGGCATTACAACTGTaGGCCACTCTGCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFLALQL*ATLLGP
Trigger: AGGGCCAAGCAGAGTGGCTCACAGTTGTAATGCCAA...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACCTGTGATCTCGCCCTaGCTCCACTTGCCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRPVISP*LHLPCD
Trigger: ATCACAAGGCAAGTGGAGGCAGGGCGAGATCACAGG...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTCCCCACCTCCCAAATTaGTGGGATTACAGGCATAAG +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISPHLPN*WDYRHK
Trigger: CTTATGCCTGTAATCCCAGCAATTTGGGAGGTGGGG...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAACTCAAGGGATCTTTTTaGCTCAGCCTCCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQLKGSF*LSLQKC
Trigger: GCACTTTTGGAGGCTGAGGCAAAAAGATCCCTTGAG...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCTCAAGGGATCTTTTTaGCTCAGCCTCCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSLKGSF*LSLQKC
Trigger: GCACTTTTGGAGGCTGAGGCAAAAAGATCCCTTGAG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAATTATCATGGCTCACTaGAGCCTTTACTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQIIMAH*SLYFLG
Trigger: GCCCAGGAAGTAAAGGCTGCAGTGAGCCATGATAAT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCATTATCATGGCTCACTaGAGCCTTTACTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCIIMAH*SLYFLG
Trigger: GCCCAGGAAGTAAAGGCTGCAGTGAGCCATGATAAT...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGTGCGGTATTCTCTTATaGTTGTCTGAGCTGACTAAG +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLCGILL*LSELTK
Trigger: CTTAGTCAGCTCAGACAACCATAAGAGAATACCGCA...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGCAGTTTATTGGCTTGTaGGCAAAGGGGTATGTGTAT +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLQFIGL*AKGYVY
Trigger: ATACACATACCCCTTTGCCCACAAGCCAATAAACTG...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTTGGAGGATTTCCCAGTaGGTCCTGAAGAACCACAGT +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISWRISQ*VLKNHS
Trigger: ACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCCATGTTGCCCAAAATaGTCTCAATCTCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSPCCPK*SQSLGL
Trigger: GAGGCCAAGAGATTGAGACCATTTTGGGCAACATGG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCCCATGTTGCCCAAAATaGTCTCAATCTCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCPCCPK*SQSLGL
Trigger: GAGGCCAAGAGATTGAGACCATTTTGGGCAACATGG...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCGTAATCCCAGCACTTTaGGAGGCCCAGAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFVIPAL*EAQKRG
Trigger: TCCTCTCTTCTGGGCCTCCCAAAGTGCTGGGATTAC...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAGTAATCCCAGCACTTTaGGAGGCCCAGAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVVIPAL*EAQKRG
Trigger: TCCTCTCTTCTGGGCCTCCCAAAGTGCTGGGATTAC...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CAA 72 bp ATATCACTGAATTCTTTTTCTCAGCAAGGAACATCCTaGAGAAAGAGAATGCACACCTGGGAGTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: ISLNSFSQQGTS*RKRMHTWEWVS
Trigger: AGAGACCCACTCCCAGGTGTGCATTCTCTTTCTCAAGGATGTTCCTTGCTGAGAAAAAGAATTCAGTGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CAA 72 bp AGCTACTTAATTAGCAGAAGCCTCTTGAGGATGGACTaGCAAACCAAAGTTGTGCTGGTTTCTACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: SYLISRSLLRMD*QTKVVLVSTGQ
Trigger: TTGACCAGTAGAAACCAGCACAACTTTGGTTTGCAAGTCCATCCTCAAGAGGCTTCTGCTAATTAAGTAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGTGGGATCAATCTGCATaGTTTATCTCGTACAGAACT +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLWDQSA*FISYRT
Trigger: AGTTCTGTACGAGATAAATCATGCAGATTGATCCCA...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCCCTCCCAAAGTGCTGTaGTTACAGACATCAGCCACT +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFPPKVL*LQTSAT
Trigger: AGTGGCTGATGTCTGTAATCACAGCACTTTGGGAGG...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTAGCTACAATTCAAGATaGCATTTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSSYNSR*HLGGDT
Trigger: TGTGTCCCCACCCAAATGTCATCTTGAATTGTAGCT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAATGGCTGACTGAGGCATaGGAATTACTTGAACAGCAT +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQWLTEA*ELLEQH
Trigger: ATGCTGTTCAAGTAATTCTCATGCCTCAGTCAGCCA...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCGAGATTTACTCACTGTaGCAAAAACAGCACACGCCT +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCEIYSL*QKQHTP
Trigger: AGGCGTGTGCTGTTTTTGTCACAGTGAGTAAATCTC...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCAGGATCATCTCAATCTaGCCTTGTGATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFRIISI*PCDPPA
Trigger: GGCAGGTGGATCACAAGGTCAGATTGAGATGATCCT...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAAGGATCATCTCAATCTaGCCTTGTGATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVRIISI*PCDPPA
Trigger: GGCAGGTGGATCACAAGGTCAGATTGAGATGATCCT...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCCCCGATTCCCACTCTaGACTATATTTCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSPRFPL*TIFLCL
Trigger: AAGACACAGAAATATAGTGCAGAGTGGGAATCGGGG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGAGCATGAGTGATTTGTaGCTTAAGGACATATTCCTG +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLSMSDL*LKDIFL
Trigger: CAGGAATATGTCCTTAAGGCACAAATCACTCATGCT...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCAAACTTGCTGGTTTTTaGGGCTTGTGGGGCATCACG +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFKLAGF*GLWGIT
Trigger: CGTGATGCCCCACAAGCCGCAAAAACCAGCAAGTTT...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAAAACTTGCTGGTTTTTaGGGCTTGTGGGGCATCACG +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVKLAGF*GLWGIT
Trigger: CGTGATGCCCCACAAGCCGCAAAAACCAGCAAGTTT...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGATGGGAGTATGAGGCATaGAGATCACCTGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRWEYEA*RSPEVR
Trigger: CCTGACCTCAGGTGATCTGCATGCCTCATACTCCCA...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTATTCAAGAGATTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAATCTCTTGAA...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTCTTGGCCTCCCAAAGTaGTGTGATTACAGACATCAG +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISLGLPK*CDYRHQ
Trigger: CTGATGTCTGTAATCACAGCACTTTGGGAGGCCAAG...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTACTGGTGGTACATGCCTaGATTCCCAGCTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVLVVHA*IPSYSE
Trigger: TTCTGAGTAGCTGGGAATGCAGGCATGTACCACCAG...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTCCCAGGGCAGAAAACTaGAAAACTGCTCAAGGCATT +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISPRAEN*KTAQGI
Trigger: AATGCCTTGAGCAGTTTTCCAGTTTTCTGCCCTGGG...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAAAGAGAATGCACACCTaGGAGTGGGTCTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVKRMHT*EWVSEL
Trigger: CAGTTCAGAGACCCACTCCCAGGTGTGCATTCTCTT...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATCAGCCAGGCAAGGTaGAGGCTGTCTGTAATCTCA +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFISQAR*RLSVIS
Trigger: TGAGATTACAGACAGCCTCCACCTTGCCTGGCTGAT...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTCATCAACTGTTTCTTTaGGCCTTCAGTCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISHQLFL*AFSPAD
Trigger: GTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATG...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCATTCAAGATGACATTTaGGTGGGGACACAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCIQDDI*VGTQPN
Trigger: GTTTGGCTGTGTCCCCACCCAAATGTCATCTTGAAT...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAAAGGCACATCTTATATaGCAGAAGGCAAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQKAHLI*QKAREP
Trigger: AGGCTCTCTTGCCTTCTGCCATATAAGATGTGCCTT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAGTGCCTGGCCGAGACTaGGTAAGTTATGAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQVPGRD*VSYEEK
Trigger: TTTTTCTTCATAACTTACCCAGTCTCGGCCAGGCAC...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTGTATCATCACAAGGGTaGGGAGGAAGGTTACAAAGT +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSVSSQG*GGRLQS
Trigger: ACTTTGTAACCTTCCTCCCCACCCTTGTGATGATAC...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CAA 72 bp TTCTTCACAGATGCCCAGACTCAGGTAACCATGATGTaGTATTCAGAACCTGTAGGTTTAATTTCAGACCCT +
Preference number: 4 (lower is better)
Translates to: FFTDAQTQVTMM*YSEPVGLISDP
Trigger: AGGGTCTGAAATTAAACCTACAGGTTCTGAATACAACATCATGGTTACCTGAGTCTGGGCATCTGTGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
3UTR CAA 72 bp ACTTGCCTTGTGATATTCTATTACCTTGTAAAGTACTaGATGTCTGTGACCCACACCTATTTGCACACTCCC +
Preference number: 4 (lower is better)
Translates to: TCLVIFYYLVKY*MSVTHTYLHTP
Trigger: GGGAGTGTGCAAATAGGTGTGGGTCACAGACATCAAGTACTTTACAAGGTAATAGAATATCACAAGGCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAAGTTCACAGGTGGGGTaGGGAATACAGAAATTCTTT +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQSSQVG*GIQKFF
Trigger: AAAGAATTTCTGTATTCCTCACCCCACCTGTGAACT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCCCACAAACAATAGCATaGGTGATTTGTGCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCPQTIA*VICALR
Trigger: CCTTAAGGCACAAATCACTCATGCTATTGTTTGTGG...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCAGAAAAGAACCTATGTaGATATCGGGGCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFRKEPM*ISGLVP
Trigger: GGGAACCAGCCCCGATATTCACATAGGTTCTTTTCT...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATCCTGGTAAGAATTTaGCCGGTGGTCCTCTACCAT +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFILVRI*PVVLYH
Trigger: ATGGTAGAGGACCACCGGTCAAATTCTTACCAGGAT...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453372.7
ENST00000590155.5
CDS-3UTR GCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCTGGTCTCGGCAAAAATaGAAAAGGAGACCTGAATTG +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCWSRQK*KRRPEL
Trigger: CAATTCAGGTCTCCTTTTGCATTTTTGCCGAGACCA...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACCCCACCTCCCAAATTaGTGGGATTACAGGCATAAG +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRPHLPN*WDYRHK
Trigger: CTTATGCCTGTAATCCCAGCAATTTGGGAGGTGGGG...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTCCAGGAGGTGGAATTTaGAGTAAGTTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISPGGGI*SKLRSH
Trigger: GTGTGATCTCAACTTACTGCAAATTCCACCTCCTGG...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCTATCAGCTGGCAACTTaGTTGCAGCTCATAACATCA +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCYQLAT*LQLITS
Trigger: TGATGTTATGAGCTGCAAGCAAGTTGCCAGCTGATA...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAAACTGTGAGCCACTCTaGTTGGCCCTTTATTCTTTT +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQNCEPL*LALYSF
Trigger: AAAAGAATAAAGGGCCAAGCAGAGTGGCTCACAGTT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTAACTGTGAGCCACTCTaGTTGGCCCTTTATTCTTTT +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSNCEPL*LALYSF
Trigger: AAAAGAATAAAGGGCCAAGCAGAGTGGCTCACAGTT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGCTGTCAATAAATATGTaGGTCAAACTCTGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLLSINM*VKLCSS
Trigger: GCTTGAACAGAGTTTGACCCACATATTTATTGACAG...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCCCCAGGGCAGAAAACTaGAAAACTGCTCAAGGCATT +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFPRAEN*KTAQGI
Trigger: AATGCCTTGAGCAGTTTTCCAGTTTTCTGCCCTGGG...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCATTTTAATTTCACCTTaGTCCTGTGATCTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCILISP*SCDLAL
Trigger: CAGGGCGAGATCACAGGACCAAGGTGAAATTAAAAT...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTAGAACCACAGTTTATTaGCTTGTGGGCAAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISRTTVY*LVGKGV
Trigger: TACCCCTTTGCCCACAAGCCAATAAACTGTGGTTCT...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAACACCATGGGGATTATaGGAGCTACAATTCAAGATG +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQTPWGL*ELQFKM
Trigger: CATCTTGAATTGTAGCTCCCATAATCCCCATGGTGT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAGTGAGCCACTCTGCTTaGCCCTTTATTCTTTTACAT +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQVSHSA*PFILLH
Trigger: ATGTAAAAGAATAAAGGGCCAAGCAGAGTGGCTCAC...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGATTAGCAGAAGCCTCTTaGGGATGGACTTGCAAACCA +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRLAEAS*GWTCKP
Trigger: TGGTTTGCAAGTCCATCCTCAAGAGGCTTCTGCTAA...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCTGGCTGACTGAGGCATaGGAATTACTTGAACAGCAT +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFWLTEA*ELLEQH
Trigger: ATGCTGTTCAAGTAATTCTCATGCCTCAGTCAGCCA...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCGAGATTTACTCACTGTaGCAAAAACAGCACACGCCT +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFEIYSL*QKQHTP
Trigger: AGGCGTGTGCTGTTTTTGTCACAGTGAGTAAATCTC...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAATCCTGGTAAGAATTTaGCCGGTGGTCCTCTACCAT +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRILVRI*PVVLYH
Trigger: ATGGTAGAGGACCACCGGTCAAATTCTTACCAGGAT...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453372.7
CDS-3UTR GCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAGCTGATGGTGAGATGTaGCTCAATGCTGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVADGEM*LNAVFL
Trigger: AAGAAAGACAGCATTGAGGCACATCTCACCATCAGC...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293648.8
ENST00000453372.7
ENST00000590155.5
CDS-3UTR GCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAATCCCTAATAAAAACTTaGTGGTTTTTGCGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQSLIKT*WFLRLV
Trigger: CACAAGCCGCAAAAACCAGCAAGTTTTTATTAGGGA...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAGAAAACATGAGGAAGTaGGCACTTACATGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVENMRK*ALTCQE
Trigger: TTCCTGGCATGTAAGTGCCCACTTCCTCATGTTTTC...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCGACCGACCTATTTGTTaGTCTCCATCGTGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFDRPIC*SPSCEN
Trigger: GTTTTCACACGATGGAGACCAACAAATAGGTCGGTC...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGATTGTAAAGATTTCATaGACACTTATCACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SFCHQICLIACVTMHFLLIVKIS*TLITSP
Trigger: TGGGGAAGTGATAAGTGTCCATGAAATCTTTACAAT...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCATGGCAGAAAAACATaGATTGTGAAGGTTTCATGG +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSHGRKT*IVKVSW
Trigger: CCATGAAACCTTCACAATCCATGTTTTTCTGCCATG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCCATGGCAGAAAAACATaGATTGTGAAGGTTTCATGG +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCHGRKT*IVKVSW
Trigger: CCATGAAACCTTCACAATCCATGTTTTTCTGCCATG...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCGACTGGCTGAAGCCATaGCAGAAAAACATGGATTGT +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFDWLKP*QKNMDC
Trigger: ACAATCCATGTTTTTCTGCCATGGCTTCAGCCAGTC...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTCAGTTTATTGGCTTGTaGGCAAAGGGGTATGTGTAT +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISQFIGL*AKGYVY
Trigger: ATACACATACCCCTTTGCCCACAAGCCAATAAACTG...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACATCAACTGTTTCTTTaGGCCTTCAGTCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRHQLFL*AFSPAD
Trigger: GTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATG...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCGTGCCTGGCCGAGACTaGGTAAGTTATGAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFVPGRD*VSYEEK
Trigger: TTTTTCTTCATAACTTACCCAGTCTCGGCCAGGCAC...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCAGTTCACAGGTGGGGTaGGGAATACAGAAATTCTTT +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFSSQVG*GIQKFF
Trigger: AAAGAATTTCTGTATTCCTCACCCCACCTGTGAACT...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293648.8
ENST00000453372.7
ENST00000590155.5
CDS-3UTR TCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCATGCAAAAGGAGACCTaGATTGCAGAAGAAATTGTT +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCMQKET*IAEEIV
Trigger: AACAATTTCTTCTGCAATTCAGGTCTCCTTTTGCAT...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCGCCATAAACAGGCAATaGGAAACTGGCCATAAACAA +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFAINRQ*ETGHKQ
Trigger: TTGTTTATGGCCAGTTTCTCATTGCCTGTTTATGGC...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCATTTCTCAAGTTGGCTaGCACTTAGGGAAAATAGAA +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCISQVG*HLGKIE
Trigger: TTCTATTTTCCCTAAGTGTCAGCCAACTTGAGAAAT...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAAGCAAGGAACATCCTTaGGAAAGAGAATGCACACCT +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRSKEHP*ERECTP
Trigger: AGGTGTGCATTCTCTTTCTCAAGGATGTTCCTTGCT...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTCCAGGAATACAAGGTTaGTGTAACATTGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISPGIQG*CNIGKA
Trigger: TGCTTTTCCAATGTTACATCAACCTTGTATTCCTGG...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAAGCTACAATTCAAGATaGCATTTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRSYNSR*HLGGDT
Trigger: TGTGTCCCCACCCAAATGTCATCTTGAATTGTAGCT...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTGGACCAATTGGACCTTaGAAATGTCATGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISGPIGP*KCHVKM
Trigger: CATCTTTACATGACATTTTCAAGGTCCAATTGGTCC...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAACAGGAACAATCAATCTaGACTTTGTATCAAATGGGT +
Preference number: 4 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQQEQSI*TLYQMG
Trigger: ACCCATTTGATACAAAGTTCAGATTGATTGTTCCTG...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAGGGCTGGGATCAATCTaGATGATTTATCTCGTACAG +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRGLGSI*MIYLVQ
Trigger: CTGTACGAGATAAATCATGCAGATTGATCCCAGCCC...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTAGCATGAGTGATTTGTaGCTTAAGGACATATTCCTG +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISSMSDL*LKDIFL
Trigger: CAGGAATATGTCCTTAAGGCACAAATCACTCATGCT...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTAAAAGCGCCTTTCCATaGATTCACTTCTTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSKSAFP*IHFFKF
Trigger: AAACTTGAAGAAGTGAATGCATGGAAAGGCGCTTTT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTTGCAAACCAAAGTTGTaGTGGTTTCTACTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISCKPKL*WFLLVK
Trigger: TTTGACCAGTAGAAACCAGCACAACTTTGGTTTGCA...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTACCAACCTTATATTCCTaGAGTAAATGCCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVPTLYS*SKCHWV
Trigger: AACCCAGTGGCATTTACTGCAGGAATATAAGGTTGG...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCCCAACCTTATATTCCTaGAGTAAATGCCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFPTLYS*SKCHWV
Trigger: AACCCAGTGGCATTTACTGCAGGAATATAAGGTTGG...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAGACTGGCTGAAGCCATaGCAGAAAAACATGGATTGT +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRDWLKP*QKNMDC
Trigger: ACAATCCATGTTTTTCTGCCATGGCTTCAGCCAGTC...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAAGAACCACAGTTTATTaGCTTGTGGGCAAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRRTTVY*LVGKGV
Trigger: TACCCCTTTGCCCACAAGCCAATAAACTGTGGTTCT...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAATTCAAGATGACATTTaGGTGGGGACACAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRIQDDI*VGTQPN
Trigger: GTTTGGCTGTGTCCCCACCCAAATGTCATCTTGAAT...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAGCTTCTGGTAAATTTTaGCATGAATGTGCCACACTG +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRASGKF*HECATL
Trigger: CAGTGTGGCACATTCATGTCAAAATTTACCAGAAGC...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTAAGCTTCATTATTCCTaGGTGCTTACAGGAAAATGT +
Preference number: 4 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISKLHYS*VLTGKC
Trigger: ACATTTTCCTGTAAGCACTCAGGAATAATGAAGCTT...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCCTTGATATAAAGTGGTaGAGAACTTGGCAGAACTGT +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFLDIKW*RTWQNC
Trigger: ACAGTTCTGCCAAGTTCTTCACCACTTTATATCAAG...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCCCCCCAAATTTCATATaGAGTTCCAAACCTCAATGT +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFPPNFI*SSKPQC
Trigger: ACATTGAGGTTTGGAACTTCATATGAAATTTGGGGG...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCCCAGGAATACAAGGTTaGTGTAACATTGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFPGIQG*CNIGKA
Trigger: TGCTTTTCCAATGTTACATCAACCTTGTATTCCTGG...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCGGACCAATTGGACCTTaGAAATGTCATGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFGPIGP*KCHVKM
Trigger: CATCTTTACATGACATTTTCAAGGTCCAATTGGTCC...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCTCCCTAATAAAAACTTaGTGGTTTTTGCGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFSLIKT*WFLRLV
Trigger: CACAAGCCGCAAAAACCAGCAAGTTTTTATTAGGGA...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAAGGCATAAGCCACTTTaGCCAGTTGCTACTATTATA +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVRHKPL*PVATII
Trigger: TATAATAGTAGCAACTGGGCAAAGTGGCTTATGCCT...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCAGAATCCTCAAAGTGTaGCTGAACAATCATTTGATA +
Preference number: 4 (lower is better)
Translates to: AILTEVRRETGLYYKRHCRILKV*LNNHLI
Trigger: TATCAAATGATTGTTCAGCCACACTTTGAGGATTCT...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAAAACCAAAGTTGTGCTaGTTTCTACTGGTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVKPKLC*FLLVKA
Trigger: TGCTTTGACCAGTAGAAACCAGCACAACTTTGGTTT...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCAAGCTTCATTATTCCTaGGTGCTTACAGGAAAATGT +
Preference number: 4 (lower is better)
Translates to: LKMATNGLNGNNTHILTFKLHYS*VLTGKC
Trigger: ACATTTTCCTGTAAGCACTCAGGAATAATGAAGCTT...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAGAAATCTGGGCACCTTaGAAAAAGAACAGGATAACA +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKREIWAP*KKNRIT
Trigger: TGTTATCCTGTTCTTTTTTCAAGGTGCCCAGATTTC...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTACAGGAACAATCAATCTaGACTTTGTATCAAATGGGT +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVQEQSI*TLYQMG
Trigger: ACCCATTTGATACAAAGTTCAGATTGATTGTTCCTG...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR TCA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAATGCAAAAGGAGACCTaGATTGCAGAAGAAATTGTT +
Preference number: 4 (lower is better)
Translates to: ISAILTEVRRETGLYYKRMQKET*IAEEIV
Trigger: AACAATTTCTTCTGCAATTCAGGTCTCCTTTTGCAT...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR GCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTATATTCCTGCAGTAAATaGCACTGGGTTTACTATTTT +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVYSCSK*HWVYYF
Trigger: AAAATAGTAAACCCAGTGGCATTTACTGCAGGAATA...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CCA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAATTGTAAAGATTTCATaGACACTTATCACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: MATNGLNGNNTHILTFIVIVKIS*TLITSP
Trigger: TGGGGAAGTGATAAGTGTCCATGAAATCTTTACAAT...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS CCA 90 bp CACACTTCCCGACGCAGCCAGACGGACTGTGCGGCCTCTCGGAACTaGCCAGAGGCCGCACCAGGAGGACTGACAGCCCCTAGAAAAGCG +
Preference number: 5 (lower is better)
Translates to: HTSRRSQTDCAASRN*PEAAPGGLTAPRKA
Trigger: CGCTTTTCTAGGGGCTGTCAGTCCTCCTGGTGCGGCCTCTGGCCAGTTCCGAGAGGCCGCACAGTCCGTCTGGCTGCGTCGGGAAGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585350.1
CDS-3UTR CAA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTGTTGCCCAGGCTGGTTaGAACTCCTTGGCTCAAGGG +
Preference number: 5 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPVAQAG*NSLAQG
Trigger: CCCTTGAGCCAAGGAGTTCAAACCAGCCTGGGCAAC...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATCCTGCAGGACATTGTaGCAGGAAGTCAGGGACCCC +
Preference number: 5 (lower is better)
Translates to: VTRANGRVHSLGGGGCILSCRTL*QEVRDP
Trigger: GGGGTCCCTGACTTCCTGCAACAATGTCCTGCAGGA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTGGATGTCACAATGGCTaGACCATGGTATGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPGCHNG*TMVWPA
Trigger: AGCTGGCCATACCATGGTCAAGCCATTGTGACATCC...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTACCAGCCTGGCCAACTaGATGAAACCGTCTCTACTA +
Preference number: 5 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPTSLAN*MKPSLL
Trigger: TAGTAGAGACGGTTTCATCAAGTTGGCCAGGCTGGT...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTAGGCAGGAGAATCACTaGAACCCAGGAATTGGAGGT +
Preference number: 5 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPRQENH*NPGIGG
Trigger: ACCTCCAATTCCTGGGTTCAAGTGATTCTCCTGCCT...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTAGAGATCTCTCTATGTaGCCTAGGCTGCCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPRDLSM*PRLPSN
Trigger: GTTTGAGGGCAGCCTAGGCAACATAGAGAGATCTCT...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGTGACCCACACCTATTaGCACACTCCCTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSVTHTY*HTPSPF
Trigger: AAAAGGGGAGGGAGTGTGCAAATAGGTGTGGGTCAC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTAATCCTGGTAAGAATTaGACCGGTGGTCCTCTACCA +
Preference number: 5 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPNPGKN*TGGPLP
Trigger: TGGTAGAGGACCACCGGTCAAATTCTTACCAGGATT...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453372.7
CDS-3UTR CAA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAGCTGGTCTCGAACTCTaGACCTCAAATGATCTGCCC +
Preference number: 5 (lower is better)
Translates to: WRISQWVLKNHSLLACGQAGLEL*TSNDLP
Trigger: GGGCAGATCATTTGAGGTCAAGAGTTCGAGACCAGC...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAATTGCCCAGACTGATCTaGAACTCCTGGCCTCAAGGA +
Preference number: 5 (lower is better)
Translates to: WRISQWVLKNHSLLACGQLPRLI*NSWPQG
Trigger: TCCTTGAGGCCAGGAGTTCAAGATCAGTCTGGGCAA...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTACTTGCAAACCAAAGTaGTGCTGGTTTCTACTGGTC +
Preference number: 5 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPTCKPK*CWFLLV
Trigger: GACCAGTAGAAACCAGCACAACTTTGGTTTGCAAGT...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTAGGCAGGAGAATCACTaGAACCCAGGAATTGGAGGT +
Preference number: 5 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSRQENH*NPGIGG
Trigger: ACCTCCAATTCCTGGGTTCAAGTGATTCTCCTGCCT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTAGAGATCTCTCTATGTaGCCTAGGCTGCCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSRDLSM*PRLPSN
Trigger: GTTTGAGGGCAGCCTAGGCAACATAGAGAGATCTCT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GGGTTAGGGTCTCCACGACCCAGCTGGTCTCGGCAAAAATGCAAAAGGAGACCTCCAGAACTTGGAGATTaGGAAAATTCTCAGCCTATC +
Preference number: 5 (lower is better)
Translates to: GLGSPRPSWSRQKCKRRPPELGD*ENSQPI
Trigger: GATAGGCTGAGAATTTTCCAAATCTCCAAGTTCTGG...AGGTCTCCTTTTGCATTTTTGCCGAGACCAGCTGGGTCGTGGAGACCCTAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTACTCTTGAGGATGGACTaGCAAACCAAAGTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: VTRANGRVHSLGGGGCILLLRMD*QTKVVL
Trigger: CAGCACAACTTTGGTTTGCAAGTCCATCCTCAAGAG...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAAAGAACCACAGTTTATaGGCTTGTGGGCAAAGGGGT +
Preference number: 5 (lower is better)
Translates to: VTRANGRVHSLGGGGCILKNHSL*ACGQRG
Trigger: ACCCCTTTGCCCACAAGCCAATAAACTGTGGTTCTT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAACTGTGTTCCTTGTTGTaGTTACAGTGTGAGCCACCG +
Preference number: 5 (lower is better)
Translates to: WRISQWVLKNHSLLACGQLCSLL*LQCEPP
Trigger: CGGTGGCTCACACTGTAACAACAACAAGGAACACAG...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTATATCAGCTGGCAACTaGCTTGCAGCTCATAACATC +
Preference number: 5 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSISAGN*LAAHNI
Trigger: GATGTTATGAGCTGCAAGCAAGTTGCCAGCTGATAT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTTGTGAGCCACTCTGCTaGGCCCTTTATTCTTTTACA +
Preference number: 5 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSCEPLC*ALYSFT
Trigger: TGTAAAAGAATAAAGGGCCAAGCAGAGTGGCTCACA...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGGAATTTGCAGTAAGTaGAGATCACACCATTGCACT +
Preference number: 5 (lower is better)
Translates to: VTRANGRVHSLGGGGCILGICSK*RSHHCT
Trigger: AGTGCAATGGTGTGATCTCAACTTACTGCAAATTCC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGCTTCTTGTCTGCATTaGTATCCCAGTGAATATTTG +
Preference number: 5 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSASCLH*YPSEYL
Trigger: CAAATATTCACTGGGATACAAATGCAGACAAGAAGC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAGCTTCTTGTCTGCATTaGTATCCCAGTGAATATTTG +
Preference number: 5 (lower is better)
Translates to: VTRANGRVHSLGGGGCILASCLH*YPSEYL
Trigger: CAAATATTCACTGGGATACAAATGCAGACAAGAAGC...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGAATTTTGGGGGTCATaGTTCAGTCCAAAGTACTTA +
Preference number: 5 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSEFWGS*FSPKYL
Trigger: TAAGTACTTTGGACTGAACAATGACCCCCAAAATTC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGCCACAGTTTATTGGCTaGTGGGCAAAGGGGTATGTG +
Preference number: 5 (lower is better)
Translates to: SFCHQICLIACVTMHFLLPQFIG*WAKGYV
Trigger: CACATACCCCTTTGCCCACAAGCCAATAAACTGTGG...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTGCAGTTGGAATTTATTaGCTAATCCGTTCCTTCCTA +
Preference number: 5 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSAVGIY*LIRSFL
Trigger: TAGGAAGGAACGGATTAGCAAATAAATTCCAACTGC...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AACATCAACTGTTTCTTTGGGCCTTCAGTCCTGCTGACTTCCGGCCTCCTGAGTATGCAGAAGGATAACTaGAACAGGATTTCAAGACCA +
Preference number: 5 (lower is better)
Translates to: NINCFFGPSVLLTSGLLSMQKDN*NRISRP
Trigger: TGGTCTTGAAATCCTGTTCAAGTTATCCTTCTGCAT...ACTCAGGAGGCCGGAAGTCAGCAGGACTGAAGGCCCAAAGAAACAGTTGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTAAAAAGGAACCAGAACTaGGAGATTTGGAAAATTCTC +
Preference number: 5 (lower is better)
Translates to: VTRANGRVHSLGGGGCILKRNQN*EIWKIL
Trigger: GAGAATTTTCCAAATCTCCAAGTTCTGGTTCCTTTT...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GTCACAAGGGCCAATGGCAGGGTACATTCACTAGGTGGGGGAGGATGTATCTTATGTGAGAATATAAATTaGTGTTTTGGGCCAGATACG +
Preference number: 5 (lower is better)
Translates to: VTRANGRVHSLGGGGCILCENIN*CFGPDT
Trigger: CGTATCTGGCCCAAAACACAAATTTATATTCTCACA...TAAGATACATCCTCCCCCACCTAGTGAATGTACCCTGCCATTGGCCCTTGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAAATACAGCATGTGTGTTaGAGCAATATGAAATCTGGG +
Preference number: 5 (lower is better)
Translates to: WRISQWVLKNHSLLACGQIQHVC*SNMKSG
Trigger: CCCAGATTTCATATTGCTCAAACACACATGCTGTAT...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCTCCTGCAGGACATTGTaGCAGGAAGTCAGGGACCCC +
Preference number: 5 (lower is better)
Translates to: LKMATNGLNGNNTHILTFSCRTL*QEVRDP
Trigger: GGGGTCCCTGACTTCCTGCAACAATGTCCTGCAGGA...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAATGCAGTGGTGCAATCTaGGCTCAATGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQCSGAI*AQCNLH
Trigger: GTGGAGGTTGCATTGAGCCAAGATTGCACCACTGCA...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCTTGCCCAGACTGATCTaGAACTCCTGGCCTCAAGGA +
Preference number: 5 (lower is better)
Translates to: AILTEVRRETGLYYKRHCLPRLI*NSWPQG
Trigger: TCCTTGAGGCCAGGAGTTCAAGATCAGTCTGGGCAA...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGATTAGCAGAAGCCTCTaGAGGATGGACTTGCAAACC +
Preference number: 5 (lower is better)
Translates to: SFCHQICLIACVTMHFLLISRSL*RMDLQT
Trigger: GGTTTGCAAGTCCATCCTCAAGAGGCTTCTGCTAAT...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGAAGAACCACAGTTTATaGGCTTGTGGGCAAAGGGGT +
Preference number: 5 (lower is better)
Translates to: SFCHQICLIACVTMHFLLKNHSL*ACGQRG
Trigger: ACCCCTTTGCCCACAAGCCAATAAACTGTGGTTCTT...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAACAGCACTTTGGGAGGTaGAATCAGGCTGAATCAGGG +
Preference number: 5 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQQHFGR*NQAESG
Trigger: CCCTGATTCAGCCTGATTCAACCTCCCAAAGTGCTG...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCCAGCACTTTGGGAGGTaGAATCAGGCTGAATCAGGG +
Preference number: 5 (lower is better)
Translates to: AILTEVRRETGLYYKRHCQHFGR*NQAESG
Trigger: CCCTGATTCAGCCTGATTCAACCTCCCAAAGTGCTG...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTTCTGGTGAGGTGTCATaGGGGAATGAGGAACATGCT +
Preference number: 5 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSSGEVS*GNEEHA
Trigger: AGCATGTTCCTCATTCCCCAATGACACCTCACCAGA...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAATCTGGTGAGGTGTCATaGGGGAATGAGGAACATGCT +
Preference number: 5 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQSGEVS*GNEEHA
Trigger: AGCATGTTCCTCATTCCCCAATGACACCTCACCAGA...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TGGAGGATTTCCCAGTGGGTCCTGAAGAACCACAGTTTATTGGCTTGTGGGCAATGTGAGAATATAAATTaGTGTTTTGGGCCAGATACG +
Preference number: 5 (lower is better)
Translates to: WRISQWVLKNHSLLACGQCENIN*CFGPDT
Trigger: CGTATCTGGCCCAAAACACAAATTTATATTCTCACA...TTGCCCACAAGCCAATAAACTGTGGTTCTTCAGGACCCACTGGGAAATCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAACCAGCCTGGCCAACTaGATGAAACCGTCTCTACTA +
Preference number: 5 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQTSLAN*MKPSLL
Trigger: TAGTAGAGACGGTTTCATCAAGTTGGCCAGGCTGGT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCCACAGTTTATTGGCTaGTGGGCAAAGGGGTATGTG +
Preference number: 5 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSPQFIG*WAKGYV
Trigger: CACATACCCCTTTGCCCACAAGCCAATAAACTGTGG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCAGCGATCATCCTTCCTaGGCCTCCCACATTGTTGGC +
Preference number: 5 (lower is better)
Translates to: LKMATNGLNGNNTHILTFSDHPS*ASHIVG
Trigger: GCCAACAATGTGGGAGGCCAAGGAAGGATGATCGCT...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAGTGACCCACACCTATTaGCACACTCCCTCCCCTTTT +
Preference number: 5 (lower is better)
Translates to: MATNGLNGNNTHILTFIVVTHTY*HTPSPF
Trigger: AAAAGGGGAGGGAGTGTGCAAATAGGTGTGGGTCAC...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTTTTTCCTGCAGGACATaGTTGCAGGAAGTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISFSCRT*LQEVRD
Trigger: GTCCCTGACTTCCTGCAACAATGTCCTGCAGGAAAA...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAGCTGGTCTCGAACTCTaGACCTCAAATGATCTGCCC +
Preference number: 5 (lower is better)
Translates to: MATNGLNGNNTHILTFIVAGLEL*TSNDLP
Trigger: GGGCAGATCATTTGAGGTCAAGAGTTCGAGACCAGC...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCCGGGGTTTCAACATGTaGGCCAGGATGGTCTTGATC +
Preference number: 5 (lower is better)
Translates to: LKMATNGLNGNNTHILTFRGFNM*ARMVLI
Trigger: GATCAAGACCATCCTGGCCAACATGTTGAAACCCCG...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCCTCTTGAGGATGGACTaGCAAACCAAAGTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: AILTEVRRETGLYYKRHCLLRMD*QTKVVL
Trigger: CAGCACAACTTTGGTTTGCAAGTCCATCCTCAAGAG...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAATTAGCAGAAGCCTCTaGAGGATGGACTTGCAAACC +
Preference number: 5 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQISRSL*RMDLQT
Trigger: GGTTTGCAAGTCCATCCTCAAGAGGCTTCTGCTAAT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTCAGCTGGCAACTTGCTaGCAGCTCATAACATCAACT +
Preference number: 5 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSQLATC*QLITST
Trigger: AGTTGATGTTATGAGCTGCAAGCAAGTTGCCAGCTG...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAACAGCTGGCAACTTGCTaGCAGCTCATAACATCAACT +
Preference number: 5 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQQLATC*QLITST
Trigger: AGTTGATGTTATGAGCTGCAAGCAAGTTGCCAGCTG...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTCTGTGTTCCTTGTTGTaGTTACAGTGTGAGCCACCG +
Preference number: 5 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISLCSLL*LQCEPP
Trigger: CGGTGGCTCACACTGTAACAACAACAAGGAACACAG...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTGTGCTGTGTTCCTTGTaGTTGTTACAGTGTGAGCCA +
Preference number: 5 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSVLCSL*LLQCEP
Trigger: TGGCTCACACTGTAACAACAACAAGGAACACAGCAC...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGGCTCAAGTAATCCTTTaGCCTCCTTTCAAAGTGTTG +
Preference number: 5 (lower is better)
Translates to: SFCHQICLIACVTMHFLLAQVIL*PPFKVL
Trigger: CAACACTTTGAAAGGAGGCAAAAGGATTACTTGAGC...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAAGCGATCATCCTTCCTaGGCCTCCCACATTGTTGGC +
Preference number: 5 (lower is better)
Translates to: ISAILTEVRRETGLYYKRSDHPS*ASHIVG
Trigger: GCCAACAATGTGGGAGGCCAAGGAAGGATGATCGCT...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTAAATATTTTGCAGTATaGGCCGGGCACAGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISKYFAV*AGHSGL
Trigger: CAAGCCACTGTGCCCGGCCAATACTGCAAAATATTT...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACGGGGTTTCAACATGTaGGCCAGGATGGTCTTGATC +
Preference number: 5 (lower is better)
Translates to: ISAILTEVRRETGLYYKRRGFNM*ARMVLI
Trigger: GATCAAGACCATCCTGGCCAACATGTTGAAACCCCG...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAATATCAGCTGGCAACTaGCTTGCAGCTCATAACATC +
Preference number: 5 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQISAGN*LAAHNI
Trigger: GATGTTATGAGCTGCAAGCAAGTTGCCAGCTGATAT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAAGCCACTTTGCCCAGTaGCTACTATTATACTTAGCG +
Preference number: 5 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQSHFAQ*LLLYLA
Trigger: CGCTAAGTATAATAGTAGCAACTGGGCAAAGTGGCT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCAGCCACTTTGCCCAGTaGCTACTATTATACTTAGCG +
Preference number: 5 (lower is better)
Translates to: AILTEVRRETGLYYKRHCSHFAQ*LLLYLA
Trigger: CGCTAAGTATAATAGTAGCAACTGGGCAAAGTGGCT...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTTGTGAGCCACTCTGCTaGGCCCTTTATTCTTTTACA +
Preference number: 5 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSCEPLC*ALYSFT
Trigger: TGTAAAAGAATAAAGGGCCAAGCAGAGTGGCTCACA...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAGGATGTCACAATGGCTaGACCATGGTATGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: ISAILTEVRRETGLYYKRGCHNG*TMVWPA
Trigger: AGCTGGCCATACCATGGTCAAGCCATTGTGACATCC...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGAAAAGGAACCAGAACTaGGAGATTTGGAAAATTCTC +
Preference number: 5 (lower is better)
Translates to: SFCHQICLIACVTMHFLLKRNQN*EIWKIL
Trigger: GAGAATTTTCCAAATCTCCAAGTTCTGGTTCCTTTT...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TCTTTCTGCCACCAGATCTGTCTAATAGCTTGTGTGACAATGCACTTCCTTCTGAAAAGGAGACCTGAATaGCAGAAGAAATTGTTAAGG +
Preference number: 5 (lower is better)
Translates to: SFCHQICLIACVTMHFLLKRRPE*QKKLLR
Trigger: CCTTAACAATTTCTTCTGCAATTCAGGTCTCCTTTT...CAGAAGGAAGTGCATTGTCACACAAGCTATTAGACAGATCTGGTGGCAGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAAAGCTGGAAATAAGGTaGGTAAGGGTTATTCTGGTG +
Preference number: 5 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQKLEIR*VRVILV
Trigger: CACCAGAATAACCCTTACCAACCTTATTTCCAGCTT...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTATCATCATACGAATTTaGGGGGTCATTGTTCAGTCC +
Preference number: 5 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSIIIRI*GVIVQS
Trigger: GGACTGAACAATGACCCCCAAAATTCGTATGATGAT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTACAGCAAGGAACATCCTaGAGAAAGAGAATGCACACC +
Preference number: 5 (lower is better)
Translates to: MATNGLNGNNTHILTFIVQQGTS*RKRMHT
Trigger: GGTGTGCATTCTCTTTCTCAAGGATGTTCCTTGCTG...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCCAGCAAGGAACATCCTaGAGAAAGAGAATGCACACC +
Preference number: 5 (lower is better)
Translates to: LKMATNGLNGNNTHILTFQQGTS*RKRMHT
Trigger: GGTGTGCATTCTCTTTCTCAAGGATGTTCCTTGCTG...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AAACCTGGGTACTCTCTACCAAGATTAACACAAGCAAAGGGAAAGAATGCACAAGGAATTTGCAGTAAGTaGAGATCACACCATTGCACT +
Preference number: 5 (lower is better)
Translates to: KPGYSLPRLTQAKGKNAQGICSK*RSHHCT
Trigger: AGTGCAATGGTGTGATCTCAACTTACTGCAAATTCC...TTGTGCATTCTTTCCCTTTGCTTGTGTTAATCTTGGTAGAGAGTACCCAGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTGATCTGTCTAATAGCTaGTGTGACAATGCACTTCCT +
Preference number: 5 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSDLSNS*CDNALP
Trigger: AGGAAGTGCATTGTCACACAAGCTATTAGACAGATC...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCGCTCAAGTAATCCTTTaGCCTCCTTTCAAAGTGTTG +
Preference number: 5 (lower is better)
Translates to: AILTEVRRETGLYYKRHCAQVIL*PPFKVL
Trigger: CAACACTTTGAAAGGAGGCAAAAGGATTACTTGAGC...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAAATCCTGGTAAGAATTaGACCGGTGGTCCTCTACCA +
Preference number: 5 (lower is better)
Translates to: MATNGLNGNNTHILTFIVNPGKN*TGGPLP
Trigger: TGGTAGAGGACCACCGGTCAAATTCTTACCAGGATT...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453372.7
ENST00000590155.5
CDS-3UTR CAA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATCCACTGTAGCTTCTaGTCTGCATTTGTATCCCAG +
Preference number: 5 (lower is better)
Translates to: LKMATNGLNGNNTHILTFIHCSF*SAFVSQ
Trigger: CTGGGATACAAATGCAGACAAGAAGCTACAGTGGAT...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCAAGGACATATTCCTGTaGCAGATAACAAGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: LKMATNGLNGNNTHILTFKDIFL*QITSQS
Trigger: GCTCTGGCTTGTTATCTGCAACAGGAATATGTCCTT...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCGAATTTTGGGGGTCATaGTTCAGTCCAAAGTACTTA +
Preference number: 5 (lower is better)
Translates to: AILTEVRRETGLYYKRHCEFWGS*FSPKYL
Trigger: TAAGTACTTTGGACTGAACAATGACCCCCAAAATTC...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTATCATCATACGAATTTaGGGGGTCATTGTTCAGTCC +
Preference number: 5 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISIIIRI*GVIVQS
Trigger: GGACTGAACAATGACCCCCAAAATTCGTATGATGAT...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp GCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGACACTGCATACAGCATGTGTGTTaGAGCAATATGAAATCTGGG +
Preference number: 5 (lower is better)
Translates to: AILTEVRRETGLYYKRHCIQHVC*SNMKSG
Trigger: CCCAGATTTCATATTGCTCAAACACACATGCTGTAT...GCAGTGTCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAACTTGCAAACCAAAGTaGTGCTGGTTTCTACTGGTC +
Preference number: 5 (lower is better)
Translates to: MATNGLNGNNTHILTFIVTCKPK*CWFLLV
Trigger: GACCAGTAGAAACCAGCACAACTTTGGTTTGCAAGT...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAGTGCTGTGTTCCTTGTaGTTGTTACAGTGTGAGCCA +
Preference number: 5 (lower is better)
Translates to: ISAILTEVRRETGLYYKRVLCSL*LLQCEP
Trigger: TGGCTCACACTGTAACAACAACAAGGAACACAGCAC...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAATCCACTGTAGCTTCTaGTCTGCATTTGTATCCCAG +
Preference number: 5 (lower is better)
Translates to: ISAILTEVRRETGLYYKRIHCSF*SAFVSQ
Trigger: CTGGGATACAAATGCAGACAAGAAGCTACAGTGGAT...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTACAGGTAACCATGATGTaGTATTCAGAACCTGTAGGT +
Preference number: 5 (lower is better)
Translates to: MATNGLNGNNTHILTFIVQVTMM*YSEPVG
Trigger: ACCTACAGGTTCTGAATACAACATCATGGTTACCTG...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AATTCAAATCTTGATTTTCTCATTGCAGCTCATAGTGGGAGATGCCCAGTCTCTAAAAGGAGACCTGAATaGCAGAAGAAATTGTTAAGG +
Preference number: 5 (lower is better)
Translates to: NSNLDFLIAAHSGRCPVSKRRPE*QKKLLR
Trigger: CCTTAACAATTTCTTCTGCAATTCAGGTCTCCTTTT...AGAGACTGGGCATCTCCCACTATGAGCTGCAATGAGAAAATCAAGATTTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp ATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATAGTAAAGCTGGAAATAAGGTaGGTAAGGGTTATTCTGGTG +
Preference number: 5 (lower is better)
Translates to: MATNGLNGNNTHILTFIVKLEIR*VRVILV
Trigger: CACCAGAATAACCCTTACCAACCTTATTTCCAGCTT...TACTATGAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTATCCCTAATAAAAACTaGCTGGTTTTTGCGGCTTGT +
Preference number: 5 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISIPNKN*LVFAAC
Trigger: ACAAGCCGCAAAAACCAGCAAGTTTTTATTAGGGAT...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTATCTTGATTTTCTCATaGCAGCTCATAGTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISILIFS*QLIVGD
Trigger: ATCTCCCACTATGAGCTGCAATGAGAAAATCAAGAT...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp AGTATGCTGGTATTACTACTTTTAGTTGGTGTTGTGCAGCGGGTTAAAATCAGTATGCAGAAGGATAACTaGAACAGGATTTCAAGACCA +
Preference number: 5 (lower is better)
Translates to: SMLVLLLLVGVVQRVKISMQKDN*NRISRP
Trigger: TGGTCTTGAAATCCTGTTCAAGTTATCCTTCTGCAT...ACTGATTTTAACCCGCTGCACAACACCAACTAAAAGTAGTAATACCAGCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp TTAAAGATGGCAACCAATGGGCTAAATGGTAACAACACTCATATCCTTACATTCATCTTGATTTTCTCATaGCAGCTCATAGTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: LKMATNGLNGNNTHILTFILIFS*QLIVGD
Trigger: ATCTCCCACTATGAGCTGCAATGAGAAAATCAAGAT...GAATGTAAGGATATGAGTGTTGTTACCATTTAGCCCATTGGTTGCCATCTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS-3UTR CAA 90 bp ATATCAGCCATCTTAACAGAAGTGAGAAGAGAGACTGGATTATACTATAAGAGAATCCCTAATAAAAACTaGCTGGTTTTTGCGGCTTGT +
Preference number: 5 (lower is better)
Translates to: ISAILTEVRRETGLYYKRIPNKN*LVFAAC
Trigger: ACAAGCCGCAAAAACCAGCAAGTTTTTATTAGGGAT...TCTCTTATAGTATAATCCAGTCTCTCTTCTCACTTCTGTTAAGATGGCTGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293648.8
ENST00000453372.7
CDS CCA 72 bp CGACGCAGCCAGACGGACTGTGCGGCCTCTCGGAACTaGCCAGAGGCCGCACCAGGAGGACTGACAGCCCCT +
Preference number: 6 (lower is better)
Translates to: RRSQTDCAASRN*PEAAPGGLTAP
Trigger: AGGGGCTGTCAGTCCTCCTGGTGCGGCCTCTGGCCAGTTCCGAGAGGCCGCACAGTCCGTCTGGCTGCGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585350.1
CDS GCA 72 bp GAACAAACACACTTCCCGACGCAGCCAGACGGACTGTaGGGCCTCTCGGAACTGGCCAGAGGCCGCACCAGG +
Preference number: 6 (lower is better)
Translates to: EQTHFPTQPDGL*GLSELARGRTR
Trigger: CCTGGTGCGGCCTCTGGCCAGTTCCGAGAGGCCGCACAGTCCGTCTGGCTGCGTCGGGAAGTGTGTTTGTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585350.1