Pregenerated sensors for ZNF560 (Homo sapiens)
Ensembl gene IDs: ENSG00000198028Ensembl transcript IDs: ENST00000301480.5
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTCATGTTCAGTTAGGCTaGAGGAAACAGCAAAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: SVSLYISRKIQLFRLSHIHVQLG*RKQQRF Trigger: AAACCTTTGCTGTTTCCTCAAGCCTAACTGAACATG...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACGAGTCGCCAGGTCCGTaGGGCTACAGGATCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHESPGP*GYRILG Trigger: CCCCAAGATCCTGTAGCCCCACGGACCTGGCGACTC...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACAAGACCCGAACACGGTaGAGTCGCCAGGTCCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHKTRTR*SRQVRG Trigger: CCCACGGACCTGGCGACTCCACCGTGTTCGGGTCTT...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACAGCCTGACGGCACAGTaGAGGTTTTGCCACAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHSLTAQ*RFCHSA Trigger: AGCACTGTGGCAAAACCTTCACTGTGCCGTCAGGCT...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACGGGGCTACAGGATCTTaGGGACGGAGTCAATCGAAC | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHGATGS*GRSQSN Trigger: GTTCGATTGACTCCGTCCCCAAGATCCTGTAGCCCC...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTAGGAAAAAGTGGCTCTaGGGAAACAGGCGCCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIRKKWL*GNRRQR Trigger: TCGCTGGCGCCTGTTTCCTCAGAGCCACTTTTTCCT...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACCTCCTGCTGCAGTGCTaGAACACTGGTTTGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHLLLQC*NTGLMF Trigger: AAACATCAAACCAGTGTTTCAGCACTGCAGCAGGAG...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTCTGGGTTTAAAGAGCTaGAATCCTACTTTGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHILGLKS*NPTLAT Trigger: CGTGGCCAAAGTAGGATTTCAGCTCTTTAAACCCAG...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTGAGCTGGTAACCTACTaGGGACAGGTTCTTGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIELVTY*GQVLVV Trigger: AACTACAAGAACCTGTCCTCAGTAGGTTACCAGCTC...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTATGTTGAATACGTCCTaGGGATGTACGGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIMLNTS*GCTEGL Trigger: AAGGCCTTCCGTACATCCTCAGGACGTATTCAACAT...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR GCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACTGGAGAACTCCTTGCTaGAAGGTTCTCAACTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHWRTPC*KVLNSS Trigger: AGAAGAGTTGAGAACCTTGCAGCAAGGAGTTCTCCA...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACTTTATTGCCCAGTCTTaGAGAACTCCTTGCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHFIAQS*RTPCCK Trigger: CTTGCAGCAAGGAGTTCTCCAAGACTGGGCAATAAA...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTAAAGGGCTGGCCCTTTaGTTTTCAGGCACATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIKGLAL*FSGTFS Trigger: GGAAAATGTGCCTGAAAACCAAAGGGCCAGCCCTTT...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACGCTGAAACACTGGTTTaGTGTTTTATTGCCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHAETLV*CFIAQS Trigger: AGACTGGGCAATAAAACATCAAACCAGTGTTTCAGC...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTATGTGGGTTTGCATGTaGTTATTAAGGTGGGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIMWVCM*LLRWVG Trigger: CCCTACCCACCTTAATAATCACATGCAAACCCACAT...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTATGTTCAAGAAAGCCTaGCGGCACAGTGAAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIMFKKA*RHSEGF Trigger: AAAACCTTCACTGTGCCGTCAGGCTTTCTTGAACAT...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATGTGCAATACGAGCTaGGAAAGAAGCAAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHMCNTS*ERSKGF Trigger: AAAGCCTTTGCTTCTTTCTCAGCTCGTATTGCACAT...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR GCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTTCTTGGAGAACTCCTTaGTGCAAGGTTCTCAACTCT | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHISWRTP*CKVLNS Trigger: AGAGTTGAGAACCTTGCAGCAAGGAGTTCTCCAAGA...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR GCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTTTCCAAAACTCCTGCTaGAGTGCTGAAACACTGGTT | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIFQNSC*SAETLV Trigger: AACCAGTGTTTCAGCACTGCAGCAGGAGTTTTGGAA...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTTTCTTGGAGAACTCTTaGCAGTGTGCTCAACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIFLENS*QCAQLF Trigger: GAAGAGTTGAGCACACTGCCAAGAGTTCTCCAAGAA...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACAGGTCTTTTGCATACTaGATACATTCAGACGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHRSFAY*IHSDVL Trigger: CAACACGTCTGAATGTATTCAGTATGCAAAAGACCT...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACGTGTGCTTCAAGGTATaGCTGATAAATGAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHVCFKV*LINEGF Trigger: AAAGCCTTCATTTATCAGTCATACCTTGAAGCACAC...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTAGTTTTTCTCCACTCTaGGTTTTCCTGTGTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHISFSPL*VFLCAS Trigger: TGAAGCACACAGGAAAACTCAGAGTGGAGAAAAACT...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR GCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTGGTTTGATGTTTTATTaGCCAGTCTTGGAGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIGLMFY*PVLENS Trigger: GGAGTTCTCCAAGACTGGGCAATAAAACATCAAACC...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR GCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTATTTTCCAAAACTCCTaGTGCAGTGCTGAAACACTG | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIIFQNS*CSAETL Trigger: CAGTGTTTCAGCACTGCAGCAGGAGTTTTGGAAAAT...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR GCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACAAACAAAAATTATCTTaGCAAAGGGCTGGCCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHKQKLS*QRAGPL Trigger: CAAAGGGCCAGCCCTTTGGCAAGATAATTTTTGTTT...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACGCTGAAATCCTACTTTaGCCACGTTCTCATAATTCT | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHAEILL*PRSHNS Trigger: AGAATTATGAGAACGTGGCCAAAGTAGGATTTCAGC...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTGCAGTGCTGAAACACTaGTTTGATGTTTTATTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIAVLKH*FDVLLP Trigger: GGGCAATAAAACATCAAACCAGTGTTTCAGCACTGC...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTCACATTTTCCATTCTTaGAGAACTCTTGGCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIHIFHS*RTLGSV Trigger: CACACTGCCAAGAGTTCTCCAAGAATGGAAAATGTG...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACGTTGGTCTTAAGGCATaGATGTTTACAGAAGACATC | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHVGLKA*MFTEDI Trigger: GATGTCTTCTGTAAACATCCATGCCTTAAGACCAAC...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACGGCAGAAGAGGTAAATaGTTTCCCACATTTGTAACA | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHGRRGK*FPTFVT Trigger: TGTTACAAATGTGGGAAACCATTTACCTCTTCTGCC...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR GCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACTACATTCAGACGTGTTaGCTCTATTTTGAGTACTCA | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHYIQTC*LYFEYS Trigger: TGAGTACTCAAAATAGAGGCAACACGTCTGAATGTA...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR GCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACCTTTCCCATAGTCAGTaGCTTCAAAGGATTTATCTT | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHLSHSQ*LQRIYL Trigger: AAGATAAATCCTTTGAAGGCACTGACTATGGGAAAG...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR GCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTATGTTCAATAAGGCCTaGAGATGTACCAAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIMFNKA*RCTKGF Trigger: AAAGCCTTTGGTACATCTGCAGGCCTTATTGAACAT...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR GCA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACAAAGGAATTTCCACATaGGTTACATTCAGAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: YSVSLYISRKIQLFRLSHKGIST*VTFRGL Trigger: AAGACCTCTGAATGTAACGCATGTGGAAATTCCTTT...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTAATGATCAACTAGACTaGAGGAGACAACAAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHINDQLD*RRQQRL Trigger: AAGCCTTTGTTGTCTCCTCCAGTCTAGTTGATCATT...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTGTTTTCTCTCTGGCGTaGCATCTTATATGTTCAATA | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIVFSLA*HLICSI Trigger: TATTGAACATATAAGATGTCACGCCAGAGAGAAAAC...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR TCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTGTTTTTAAGCGATCATaGAAGCACATGGAATTTCGA | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIVFKRS*KHMEFR Trigger: TCGAAATTCCATGTGCTTTCATGATCGCTTAAAAAC...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR GCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTCGGAAAGATTTTCCATaGTTACTGAACACAGAAACT | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIRKDFP*LLNTET Trigger: AGTTTCTGTGTTCAGTAAGCATGGAAAATCTTTCCG...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR GCA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTAGAAAGGAGGTCTTTTaGATACTGAATACATTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SVSLYISRKIQLFRLSHIRKEVF*ILNTFR Trigger: TCTGAATGTATTCAGTATGCAAAAGACCTCCTTTCT...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CAA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACTGGGGCTACAGGATCTaGGGGACGGAGTCAATCGAA | + |
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Preference number: 5 (lower is better) Translates to: YSVSLYISRKIQLFRLSHWGYRI*GTESIE Trigger: TTCGATTGACTCCGTCCCCAAGATCCTGTAGCCCCA...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CAA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACGTCTTGGAGAACTCCTaGCTGCAAGGTTCTCAACTC | + |
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Preference number: 5 (lower is better) Translates to: YSVSLYISRKIQLFRLSHVLENS*LQGSQL Trigger: GAGTTGAGAACCTTGCAGCAAGGAGTTCTCCAAGAC...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CAA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTCAAAGGGCTGGCCCTTaGGTTTTCAGGCACATTTTC | + |
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Preference number: 5 (lower is better) Translates to: SVSLYISRKIQLFRLSHIQRAGP*VFRHIF Trigger: GAAAATGTGCCTGAAAACCAAAGGGCCAGCCCTTTG...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CAA 90 bp | TACAGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTCTTGGAGAACTCTaGGCAGTGTGCTCAACTCTT | + |
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Preference number: 5 (lower is better) Translates to: YSVSLYISRKIQLFRLSHILGEL*AVCSTL Trigger: AAGAGTTGAGCACACTGCCAAGAGTTCTCCAAGAAT...GTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS TCA 90 bp | TCAGTGCCTTCAAAGGATTTATCTTGTGTACACTTTCTCTGGACCTaGACATTTAAAATCAGGCGGAAAGATTTTCCATGCTTACTGAAC | + |
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Preference number: 5 (lower is better) Translates to: SVPSKDLSCVHFLWT*TFKIRRKDFPCLLN Trigger: GTTCAGTAAGCATGGAAAATCTTTCCGCCTGATTTTAAATGTTCAGGTCCAGAGAAAGTGTACACAAGATAAATCCTTTGAAGGCACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CAA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTTTTTATTGCCCAGTCTaGGAGAACTCCTTGCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: SVSLYISRKIQLFRLSHIFYCPV*ENSLLQ Trigger: TTGCAGCAAGGAGTTCTCCAAGACTGGGCAATAAAA...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CAA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTGCACATTTTCCATTCTaGGAGAACTCTTGGCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: SVSLYISRKIQLFRLSHIAHFPF*ENSWQC Trigger: ACACTGCCAAGAGTTCTCCAAGAATGGAAAATGTGC...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CAA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTTGGTTTGATGTTTTATaGCCCAGTCTTGGAGAACTC | + |
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Preference number: 5 (lower is better) Translates to: SVSLYISRKIQLFRLSHIWFDVL*PSLGEL Trigger: GAGTTCTCCAAGACTGGGCAATAAAACATCAAACCA...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CAA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTGGTTACCAGGTCCATTaGTATCCCATTAGAAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: SVSLYISRKIQLFRLSHIGYQVH*YPIRSL Trigger: CAAACTTCTAATGGGATACAAATGGACCTGGTAACC...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CAA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTGAAGACATCTTCACATaGCTTACAGTCATAGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SVSLYISRKIQLFRLSHIEDIFT*LTVIEF Trigger: GAACTCTATGACTGTAAGCAATGTGAAGATGTCTTC...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CAA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTGAGAAAGGAGGTCTTTaGCATACTGAATACATTCAG | + |
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Preference number: 5 (lower is better) Translates to: SVSLYISRKIQLFRLSHIEKGGL*HTEYIQ Trigger: CTGAATGTATTCAGTATGCAAAAGACCTCCTTTCTC...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS-3UTR CAA 90 bp | AGTGTGAGTTTGTACATATCTAGAAAGATTCAACTGTTCAGGCTTTCTCACATTATGGTAGAGGTTTTATaGTATAGAGAAAGGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SVSLYISRKIQLFRLSHIMVEVL*YRERRS Trigger: AGACCTCCTTTCTCTATACAATAAAACCTCTACCAT...AATGTGAGAAAGCCTGAACAGTTGAATCTTTCTAGATATGTACAAACTCACACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS CCA 72 bp | CGGTGGAGTCGCCAGGTCCGTGGGGCTACAGGATCTTaGGGACGGAGTCAATCGAACGCGAACGGCAAAATT | + |
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Preference number: 6 (lower is better) Translates to: RWSRQVRGATGS*GRSQSNANGKI Trigger: AATTTTGCCGTTCGCGTTCGATTGACTCCGTCCCCAAGATCCTGTAGCCCCACGGACCTGGCGACTCCACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS TCA 72 bp | TTCCAAAACTCCTGCTGCAGTGCTGAAACACTGGTTTaGTGTTTTATTGCCCAGTCTTGGAGAACTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: FQNSCCSAETLV*CFIAQSWRTPC Trigger: GCAAGGAGTTCTCCAAGACTGGGCAATAAAACATCAAACCAGTGTTTCAGCACTGCAGCAGGAGTTTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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| CDS TCA 72 bp | TCAAAGGATTTATCTTGTGTACACTTTCTCTGGACCTaGACATTTAAAATCAGGCGGAAAGATTTTCCATGC | + |
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Preference number: 6 (lower is better) Translates to: SKDLSCVHFLWT*TFKIRRKDFPC Trigger: GCATGGAAAATCTTTCCGCCTGATTTTAAATGTTCAGGTCCAGAGAAAGTGTACACAAGATAAATCCTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301480.5 |
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