Pregenerated sensors for ZNF56 (Homo sapiens)
Ensembl gene IDs: ENSG00000267419Ensembl transcript IDs: ENST00000586924.1, ENST00000589657.1, ENST00000591884.2
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCGGATCATCTGAGGTCAGGAGTTCACGCAAATCAGGGGGCCCGTaGAAGGCAACTGAGCAGGGATCCATGGGAAAGACACCCTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: GGSSEVRSSRKSGGP*KATEQGSMGKTPSE Trigger: CTCTGAGGGTGTCTTTCCCATGGATCCCTGCTCAGTTGCCTTTCACGGGCCCCCTGATTTGCGTGAACTCCTGACCTCAGATGATCCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586924.1 |
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| CDS CCA 90 bp | CACGCAAATCAGGGGGCCCGTGAAAGGCAACTGAGCAGGGATCCATaGGAAAGACACCCTCAGAGGCACAAGATTCTCTCGTTACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HANQGARERQLSRDP*ERHPQRHKILSLPF Trigger: GAAAGGTAACGAGAGAATCTTGTGCCTCTGAGGGTGTCTTTCCCATGGATCCCTGCTCAGTTGCCTTTCACGGGCCCCCTGATTTGCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586924.1 |
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| CDS CCA 72 bp | CAGGGGGCCCGTGAAAGGCAACTGAGCAGGGATCCATaGGAAAGACACCCTCAGAGGCACAAGATTCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QGARERQLSRDP*ERHPQRHKILS Trigger: CGAGAGAATCTTGTGCCTCTGAGGGTGTCTTTCCCATGGATCCCTGCTCAGTTGCCTTTCACGGGCCCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586924.1 |
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| CDS TCA 72 bp | TCTGAGGTCAGGAGTTCACGCAAATCAGGGGGCCCGTaGAAGGCAACTGAGCAGGGATCCATGGGAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: SEVRSSRKSGGP*KATEQGSMGKT Trigger: TGTCTTTCCCATGGATCCCTGCTCAGTTGCCTTTCACGGGCCCCCTGATTTGCGTGAACTCCTGACCTCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586924.1 |
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| CDS TCA 72 bp | CTGAAGGTGGGGGCCTTCGCCCATCATGCCGGAAGCTaGAATTTCTTGTTACCTGCAAGTGATCGCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LKVGAFAHHAGS*NFLLPASDRRA Trigger: AGCCCTGCGATCACTTGCAGGTAACAAGAAATTTCAGCTTCCGGCATGATGGGCGAAGGCCCCCACCTTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000589657.1 ENST00000591884.2 |
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