RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF557 (Homo sapiens)

Ensembl gene IDs: ENSG00000130544

Ensembl transcript IDs: ENST00000252840.11, ENST00000414706.2

Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCTACGTGATTTGGAAGCGCAGCTCCCTTGGAAACAGCTAGCATaGACTTGTCGGGCTTGTAAGCCATTTGGAAGTGGTCCCTTCACC +
Preference number: 1 (lower is better)
Translates to: GLRDLEAQLPWKQLA*TCRACKPFGSGPFT
Trigger: GGTGAAGGGACCACTTCCAAATGGCTTACAAGCCCGACAAGTGCATGCTAGCTGTTTCCAAGGGAGCTGCGCTTCCAAATCACGTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR CCA 90 bp AAAGACATTATGCTTTCTGTGTTGGCTCCTTTAGATCACTGGCTTTaGGGAGAAGTTGCTTCCATAAAGAAACTCAGCCCTGTTGAGAGG +
Preference number: 1 (lower is better)
Translates to: KDIMLSVLAPLDHWL*GEVASIKKLSPVER
Trigger: CCTCTCAACAGGGCTGAGTTTCTTTATGGAAGCAACTTCTCCCCAAAGCCAGTGATCTAAAGGAGCCAACACAGAAAGCATAATGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR CCA 90 bp GTCATAAAAGACATTATGCTTTCTGTGTTGGCTCCTTTAGATCACTaGCTTTGGGGAGAAGTTGCTTCCATAAAGAAACTCAGCCCTGTT +
Preference number: 1 (lower is better)
Translates to: VIKDIMLSVLAPLDH*LWGEVASIKKLSPV
Trigger: AACAGGGCTGAGTTTCTTTATGGAAGCAACTTCTCCCCAAAGCCAGTGATCTAAAGGAGCCAACACAGAAAGCATAATGTCTTTTATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR TCA 90 bp ATTCTGGATGATTACAGTTCTGCTGACATCTGGACTGTAACCTCTTaGGATATCCTGAAGAACTATAGAGCTATGTTGTTTCTGAATTCC +
Preference number: 1 (lower is better)
Translates to: ILDDYSSADIWTVTS*DILKNYRAMLFLNS
Trigger: GGAATTCAGAAACAACATAGCTCTATAGTTCTTCAGGATATCTCAAGAGGTTACAGTCCAGATGTCAGCAGAACTGTAATCATCCAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR TCA 90 bp GGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAATATaGCTGTTTGTGTCACAGGCTTTTCAACACTGTGTATACTCAACA +
Preference number: 1 (lower is better)
Translates to: GFYSIPNYTVLCLVI*LFVSQAFQHCVYST
Trigger: TGTTGAGTATACACAGTGTTGAAAAGCCTGTGACACAAACAGTCATATTACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGGCTGCAGTGAGCTGTaGTCACACCACTGCGCTCCA +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNGCSEL*SHHCAP
Trigger: TGGAGCGCAGTGGTGTGATCACAGCTCACTGCAGCC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR GCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCTGGGAGGCAGAGCTTaGAGTGAGCCACAATCGCGC +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNLGGRA*SEPQSR
Trigger: GCGCGATTGTGGCTCACTGCAAGCTCTGCCTCCCAG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCACTAGTCTTGAACTCCTaGCCTCAGGTGGTCCGCCTG +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSLVLNS*PQVVRL
Trigger: CAGGCGGACCACCTGAGGTCAGGAGTTCAAGACTAG...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCACAGGCTGGAGTGCAGTaGGTCAACCTTGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSQAGVQ*VNLGSL
Trigger: CAGTGAGCCAAGGTTGACCCACTGCACTCCAGCCTG...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR GCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCCAAGATTGCACCACTaGACTACAGCCTGGGCACAG +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNPRLHH*TTAWAQ
Trigger: CTGTGCCCAGGCTGTAGTGCAGTGGTGCAATCTTGG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR GCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCACCAAGATTGCACCACTaGACTACAGCCTGGGCACAG +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSPRLHH*TTAWAQ
Trigger: CTGTGCCCAGGCTGTAGTGCAGTGGTGCAATCTTGG...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR GCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAAGACAGGCATGGTGGTaGATGCCTACAGTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSRQAWW*MPTVPA
Trigger: AGCTGGGACTGTAGGCATGCACCACCATGCCTGTCT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTTGAGCCCAGGAGTTTaGGAGCAGCCTGGGAAACAT +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNLSPGV*EQPGKH
Trigger: ATGTTTCCCAGGCTGCTCTCAAACTCCTGGGCTCAA...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACAGCCTTCCAAGTAGCTaGGATTACAGGCATGCGCCA +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNSLPSS*DYRHAP
Trigger: TGGCGCATGCCTGTAATCTCAGCTACTTGGAAGGCT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR GCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGTGGAAACAGCTAGCATaGACTTGTCGGGCTTGTAAG +
Preference number: 2 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRWKQLA*TCRACK
Trigger: CTTACAAGCCCGACAAGTGCATGCTAGCTGTTTCCA...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR GCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGCTGGAGTGTGGTTGTaGAATCTCGGCTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNAGVWL*NLGSLQ
Trigger: TTGCAGTGAGCCGAGATTGCACAACCACACTCCAGC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGGCAGGAGAATTACTTaGTCCCAGGAAGTAGAGGCT +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSGRRIT*SQEVEA
Trigger: AGCCTCTACTTCCTGGGATCAAGTAATTCTCCTGCC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACAACCTCTGCCCAGTTTaGAGCAATTCTCCTGCCTCA +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNNLCPV*SNSPAS
Trigger: TGAGGCAGGAGAATTGCTTCAAACTGGGCAGAGGTT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR GCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACAAGAAACAGTATTTGTaGCGGGCATGGTGGCTCACG +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNKKQYL*RAWWLT
Trigger: CGTGAGCCACCATGCCCGGCACAAATACTGTTTCTT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGAGGCCTACGTGATTTaGAAGCGCAGCTCCCTTGGA +
Preference number: 2 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVEAYVI*KRSSLG
Trigger: TCCAAGGGAGCTGCGCTTCCAAATCACGTAGGCCTC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCACCTTCCTCAGCCTCTTaGGTAGCTGGGATTATAGAT +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSPSSAS*VAGIID
Trigger: ATCTATAATCCCAGCTACTCAAGAGGCTGAGGAAGG...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR GCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCATGGAAACAGCTAGCATaGACTTGTCGGGCTTGTAAG +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSWKQLA*TCRACK
Trigger: CTTACAAGCCCGACAAGTGCATGCTAGCTGTTTCCA...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR GCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGCTTTGGGGAGAAGTTaGTTCCATAAAGAAACTCAG +
Preference number: 2 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRALGRS*FHKETQ
Trigger: CTGAGTTTCTTTATGGAAGCAACTTCTCCCCAAAGC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGCTCCTTTAGATCACTaGCTTTGGGGAGAAGTTGCT +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNAPLDH*LWGEVA
Trigger: AGCAACTTCTCCCCAAAGCCAGTGATCTAAAGGAGC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAAAAACTAGACAGGCATaGTGGTGCATGCCTACAGTC +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSKTRQA*WCMPTV
Trigger: GACTGTAGGCATGCACCACCATGCCTGTCTAGTTTT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACAAAACTAGACAGGCATaGTGGTGCATGCCTACAGTC +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNKTRQA*WCMPTV
Trigger: GACTGTAGGCATGCACCACCATGCCTGTCTAGTTTT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGGCATGAAAGATCAATaGATGCTTTTCCCACAGTTA +
Preference number: 2 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRGMKDQ*MLFPQL
Trigger: TAACTGTGGGAAAAGCATTCATTGATCTTTCATGCC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGCCTCTTGAGATATCCTaGAGAACTATAGAGCTATGT +
Preference number: 2 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRPLEIS*RTIELC
Trigger: ACATAGCTCTATAGTTCTTCAGGATATCTCAAGAGG...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGTGGACTGTAACCTCTTaGGATATCCTGAAGAACTAT +
Preference number: 2 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRWTVTS*DILKNY
Trigger: ATAGTTCTTCAGGATATCTCAAGAGGTTACAGTCCA...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGGCAGGAGAATTACTTaGTCCCAGGAAGTAGAGGCT +
Preference number: 2 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVGRRIT*SQEVEA
Trigger: AGCCTCTACTTCCTGGGATCAAGTAATTCTCCTGCC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGAGTTAACCTGTGGGTaGTTGAATGCTACTCCCATA +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNELTCG*LNATPI
Trigger: TATGGGAGTAGCATTCAATCACCCACAGGTTAACTC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCTGGTTTTCCATTTTTaGTGCCACACACAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNLVFHF*CHTQGF
Trigger: GAAACCCTGTGTGTGGCATCAAAAATGGAAAACCAG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGCCTGGGAAACATGGTaGATCCCCATCTTTACAAAA +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSAWETW*IPIFTK
Trigger: TTTTGTAAAGATGGGGATTCACCATGTTTCCCAGGC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR GCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCACGGTGTCTCACCCAGTaGGTTATTCCTACTTCTTTT +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSRCLTQ*VIPTSF
Trigger: AAAAGAAGTAGGAATAACGCACTGGGTGAGACACCG...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACAGTTTGAGACTAGTCTaGGCAACATGGCAAAACCCT +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNSLRLV*ATWQNP
Trigger: AGGGTTTTGCCATGTTGCCCAGACTAGTCTCAAACT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAAGTTTGAGACTAGTCTaGGCAACATGGCAAAACCCT +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSSLRLV*ATWQNP
Trigger: AGGGTTTTGCCATGTTGCCCAGACTAGTCTCAAACT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAAAAATGAGGGTCAGCTaGAGGCTTTCCTCCACTGAT +
Preference number: 2 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVKMRVS*RLSSTD
Trigger: ATCAGTGGAGGAAAGCCTTCAGCTGACCCTCATTTT...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGATTTCTCTCTAGAGTaGGTTAACCTGTGGGTGATT +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNDFSLE*VNLWVI
Trigger: AATCACCCACAGGTTAACTCACTCTAGAGAGAAATC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTTGTGCTTGGTAATATaGCTGTTTGTGTCACAGGCT +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNLCLVI*LFVSQA
Trigger: AGCCTGTGACACAAACAGTCATATTACCAAGCACAA...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR GCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCACTGTGGGTGATTGAATaGTACTCCCATATTGATCAG +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSLWVIE*YSHIDQ
Trigger: CTGATCAATATGGGAGTAGCATTCAATCACCCACAG...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTTAGATCACTGGCTTTaGGGAGAAGTTGCTTCCATA +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNLDHWL*GEVASI
Trigger: TATGGAAGCAACTTCTCCCCAAAGCCAGTGATCTAA...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGCTCCTTTAGATCACTaGCTTTGGGGAGAAGTTGCT +
Preference number: 2 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVAPLDH*LWGEVA
Trigger: AGCAACTTCTCCCCAAAGCCAGTGATCTAAAGGAGC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCACCTCCACTGATTTCATaGCAAGTTTTCCAGATGGTT +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSPPLIS*QVFQMV
Trigger: AACCATCTGGAAAACTTGCCATGAAATCAGTGGAGG...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCCTCCACTGATTTCATaGCAAGTTTTCCAGATGGTT +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNPPLIS*QVFQMV
Trigger: AACCATCTGGAAAACTTGCCATGAAATCAGTGGAGG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGGCATGAAAGATCAATaGATGCTTTTCCCACAGTTA +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNGMKDQ*MLFPQL
Trigger: TAACTGTGGGAAAAGCATTCATTGATCTTTCATGCC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCATGGACTGTAACCTCTTaGGATATCCTGAAGAACTAT +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSWTVTS*DILKNY
Trigger: ATAGTTCTTCAGGATATCTCAAGAGGTTACAGTCCA...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGAGTTAACCTGTGGGTaGTTGAATGCTACTCCCATA +
Preference number: 2 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVELTCG*LNATPI
Trigger: TATGGGAGTAGCATTCAATCACCCACAGGTTAACTC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTACTGGTTTTCCATTTTTaGTGCCACACACAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVLVFHF*CHTQGF
Trigger: GAAACCCTGTGTGTGGCATCAAAAATGGAAAACCAG...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCACTCAGTTAAGAGATaGGGCATCCTAACATTGATT +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNHSVKR*GILTLI
Trigger: AATCAATGTTAGGATGCCTCATCTCTTAACTGAGTG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR GCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCATTTGTTCTAAGTTACTaGGTGGCCACTCAGTTAAGA +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSFVLSY*VATQLR
Trigger: TCTTAACTGAGTGGCCACGCAGTAACTTAGAACAAA...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCATGTTCATACCTCCTGTaGTGTTCTTCCACATTGTAT +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSCSYLL*CSSTLY
Trigger: ATACAATGTGGAAGAACACCACAGGAGGTATGAACA...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGGCAAGTTTTCCAGATaGTTCCAAATGTCTACTGTT +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSGKFSR*FQMSTV
Trigger: AACAGTAGACATTTGGAACCATCTGGAAAACTTGCC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGATCAGTTTAGAAGTTaGCTGGGCATGGTGGTTCAT +
Preference number: 2 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVDQFRS*LGMVVH
Trigger: ATGAACCACCATGCCCAGCCAACTTCTAAACTGATC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGAGCTATGTTGTTTCTaGATTCCTGACCTACAAAAA +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNELCCF*IPDLQK
Trigger: TTTTTGTAGGTCAGGAATTCAGAAACAACATAGCTC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGAGCTATGTTGTTTCTaGATTCCTGACCTACAAAAA +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSELCCF*IPDLQK
Trigger: TTTTTGTAGGTCAGGAATTCAGAAACAACATAGCTC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGATTTCTCTCTAGAGTaGGTTAACCTGTGGGTGATT +
Preference number: 2 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVDFSLE*VNLWVI
Trigger: AATCACCCACAGGTTAACTCACTCTAGAGAGAAATC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGGTAGGGGGAAAGTTTaGGCTCAAAGTTTTACCATA +
Preference number: 2 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVGRGKV*AQSFTI
Trigger: TATGGTAAAACTTTGAGCTCAAACTTTCCCCCTACC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCATATTCCTCTGTTGTATaGTCTCCGAAATGTGACTTA +
Preference number: 2 (lower is better)
Translates to: SNMQNRANAANQRFLKNSYSSVV*SPKCDL
Trigger: TAAGTCACATTTCGGAGATCATACAACAGAGGAATA...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACAAATTAATACACTCGTaGGTATTGCATCCAAGGAAC +
Preference number: 2 (lower is better)
Translates to: SSNMQNRANAANQRFLKNKLIHS*VLHPRN
Trigger: GTTCCTTGGATGCAATACTCACGAGTGTATTAATTT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR GCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGCTTTGGGGAGAAGTTaGTTCCATAAAGAAACTCAG +
Preference number: 2 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVALGRS*FHKETQ
Trigger: CTGAGTTTCTTTATGGAAGCAACTTCTCCCCAAAGC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGGCAAGTTTTCCAGATaGTTCCAAATGTCTACTGTT +
Preference number: 2 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVGKFSR*FQMSTV
Trigger: AACAGTAGACATTTGGAACCATCTGGAAAACTTGCC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTATATTCCTCTGTTGTATaGTCTCCGAAATGTGACTTA +
Preference number: 2 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVYSSVV*SPKCDL
Trigger: TAAGTCACATTTCGGAGATCATACAACAGAGGAATA...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR TCA 72 bp TCCATAAAGAAACTCAGCCCTGTTGAGAGGCCTACGTaGTTTGGAAGCGCAGCTCCCTTGGAAACAGCTAGC +
Preference number: 3 (lower is better)
Translates to: SIKKLSPVERPT*FGSAAPLETAS
Trigger: GCTAGCTGTTTCCAAGGGAGCTGCGCTTCCAAATCACGTAGGCCTCTCAACAGGGCTGAGTTTCTTTATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR GCA 72 bp GATTTGGAAGCGCAGCTCCCTTGGAAACAGCTAGCATaGACTTGTCGGGCTTGTAAGCCATTTGGAAGTGGT +
Preference number: 3 (lower is better)
Translates to: DLEAQLPWKQLA*TCRACKPFGSG
Trigger: ACCACTTCCAAATGGCTTACAAGCCCGACAAGTGCATGCTAGCTGTTTCCAAGGGAGCTGCGCTTCCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGGGCTTGTAAGCCATTaGGAAGTGGTCCCTTCACCA +
Preference number: 3 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRGLVSH*EVVPSP
Trigger: TGGTGAAGGGACCACTTCCAAATGGCTTACAAGCCC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGTAGTCCCAGCTACATaGGAGGCTGGGGCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: SNMQNRANAANQRFLKNSVVPAT*EAGAGE
Trigger: TTCTCCTGCCCCAGCCTCCAATGTAGCTGGGACTAC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGTAGTCCCAGCTACATaGGAGGCTGGGGCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: SSNMQNRANAANQRFLKNVVPAT*EAGAGE
Trigger: TTCTCCTGCCCCAGCCTCCAATGTAGCTGGGACTAC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGAGAAACTCAGCCCTGTaGAGAGGCCTACGTGATTTG +
Preference number: 3 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRRNSAL*RGLRDL
Trigger: CAAATCACGTAGGCCTCTCAACAGGGCTGAGTTTCT...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCAAGCTGGAGTGTGGTaGTGCAATCTCGGCTCACTG +
Preference number: 3 (lower is better)
Translates to: SSNMQNRANAANQRFLKNQAGVW*CNLGSL
Trigger: CAGTGAGCCGAGATTGCACAACCACACTCCAGCTTG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR CCA 72 bp ATGCTTTCTGTGTTGGCTCCTTTAGATCACTGGCTTTaGGGAGAAGTTGCTTCCATAAAGAAACTCAGCCCT +
Preference number: 3 (lower is better)
Translates to: MLSVLAPLDHWL*GEVASIKKLSP
Trigger: AGGGCTGAGTTTCTTTATGGAAGCAACTTCTCCCCAAAGCCAGTGATCTAAAGGAGCCAACACAGAAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGGGCTTGTAAGCCATTaGGAAGTGGTCCCTTCACCA +
Preference number: 3 (lower is better)
Translates to: SNMQNRANAANQRFLKNSGLVSH*EVVPSP
Trigger: TGGTGAAGGGACCACTTCCAAATGGCTTACAAGCCC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGGAAGCGCAGCTCCCTaGGAAACAGCTAGCATGCAC +
Preference number: 3 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVGSAAP*ETASMH
Trigger: GTGCATGCTAGCTGTTTCCAAGGGAGCTGCGCTTCC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGGGCAGGAGAATTACTaGATCCCAGGAAGTAGAGGC +
Preference number: 3 (lower is better)
Translates to: SNMQNRANAANQRFLKNSGQENY*IPGSRG
Trigger: GCCTCTACTTCCTGGGATCAAGTAATTCTCCTGCCC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGTTTAGATCACTGGCTTaGGGGAGAAGTTGCTTCCAT +
Preference number: 3 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRFRSLA*GRSCFH
Trigger: ATGGAAGCAACTTCTCCCCAAAGCCAGTGATCTAAA...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCACGAGGTCAGGAGATaGAGACCATACTGGCTAACA +
Preference number: 3 (lower is better)
Translates to: SSNMQNRANAANQRFLKNHEVRR*RPYWLT
Trigger: TGTTAGCCAGTATGGTCTCAATCTCCTGACCTCGTG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR CCA 72 bp GACATTATGCTTTCTGTGTTGGCTCCTTTAGATCACTaGCTTTGGGGAGAAGTTGCTTCCATAAAGAAACTC +
Preference number: 3 (lower is better)
Translates to: DIMLSVLAPLDH*LWGEVASIKKL
Trigger: GAGTTTCTTTATGGAAGCAACTTCTCCCCAAAGCCAGTGATCTAAAGGAGCCAACACAGAAAGCATAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR CCA 72 bp CAGATGGTTCCAAATGTCTACTGTTCATACCTCCTGTaGTGTTCTTCCACATTGTATCAGGATTGGTGTGTA +
Preference number: 3 (lower is better)
Translates to: QMVPNVYCSYLL*CSSTLYQDWCV
Trigger: TACACACCAATCCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAACCATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGATTATGCTTTCTGTGTaGGCTCCTTTAGATCACTGG +
Preference number: 3 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRIMLSV*APLDHW
Trigger: CCAGTGATCTAAAGGAGCCAACACAGAAAGCATAAT...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTACAATAAGCCAAGATaGCACCACTGCACTACAGCC +
Preference number: 3 (lower is better)
Translates to: SSNMQNRANAANQRFLKNYNKPR*HHCTTA
Trigger: GGCTGTAGTGCAGTGGTGCAATCTTGGCTTATTGTA...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAAGAAACTCAGCCCTGTaGAGAGGCCTACGTGATTTG +
Preference number: 3 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVRNSAL*RGLRDL
Trigger: CAAATCACGTAGGCCTCTCAACAGGGCTGAGTTTCT...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCATTTAGATCACTGGCTTaGGGGAGAAGTTGCTTCCAT +
Preference number: 3 (lower is better)
Translates to: SNMQNRANAANQRFLKNSFRSLA*GRSCFH
Trigger: ATGGAAGCAACTTCTCCCCAAAGCCAGTGATCTAAA...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTGGTGTTCTTCCACATaGTATCAGGATTGGTGTGTA +
Preference number: 3 (lower is better)
Translates to: SSNMQNRANAANQRFLKNWCSST*YQDWCV
Trigger: TACACACCAATCCTGATACAATGTGGAAGAACACCA...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR TCA 72 bp CAACACTGTGTATACTCAACATATTCCTCTGTTGTATaGTCTCCGAAATGTGACTTAAGGAATGAGTGTCCC +
Preference number: 3 (lower is better)
Translates to: QHCVYSTYSSVV*SPKCDLRNECP
Trigger: GGGACACTCATTCCTTAAGTCACATTTCGGAGATCATACAACAGAGGAATATGTTGAGTATACACAGTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR TCA 72 bp ACTGAAAATGAACGAGCTAGTGGCCCAACCTACAAATaGGACATTGATGAAGGTAATTCCACATTCATAGCA +
Preference number: 3 (lower is better)
Translates to: TENERASGPTYK*DIDEGNSTFIA
Trigger: TGCTATGAATGTGGAATTACCTTCATCAATGTCTCATTTGTAGGTTGGGCCACTAGCTCGTTCATTTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCACACATTGTATCAGGATaGGTGTGTATGACCAATGTA +
Preference number: 3 (lower is better)
Translates to: SNMQNRANAANQRFLKNSHIVSG*VCMTNV
Trigger: TACATTGGTCATACACACCAATCCTGATACAATGTG...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACAATGCTACTCCCATATaGATCAGTTTAGAAGTTGGC +
Preference number: 3 (lower is better)
Translates to: SSNMQNRANAANQRFLKNNATPI*ISLEVG
Trigger: GCCAACTTCTAAACTGATCAATATGGGAGTAGCATT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCAACATATTCCTCTGTaGTATGATCTCCGAAATGTG +
Preference number: 3 (lower is better)
Translates to: SSNMQNRANAANQRFLKNQHIPL*YDLRNV
Trigger: CACATTTCGGAGATCATACAACAGAGGAATATGTTG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR TCA 72 bp GATTACAGTTCTGCTGACATCTGGACTGTAACCTCTTaGGATATCCTGAAGAACTATAGAGCTATGTTGTTT +
Preference number: 3 (lower is better)
Translates to: DYSSADIWTVTS*DILKNYRAMLF
Trigger: AAACAACATAGCTCTATAGTTCTTCAGGATATCTCAAGAGGTTACAGTCCAGATGTCAGCAGAACTGTAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR TCA 72 bp TCAGGATTGGTGTGTATGACCAATGTAACAGGGACATaGAAACATATCTCACTGAAGCTAGGTCATAAAAGA +
Preference number: 3 (lower is better)
Translates to: SGLVCMTNVTGT*KHISLKLGHKR
Trigger: TCTTTTATGACCTAGCTTCAGTGAGATATGTTTTCATGTCCCTGTTACATTGGTCATACACACCAATCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR TCA 72 bp AGCATACCAAACTATACTGTCTTGTGCTTGGTAATATaGCTGTTTGTGTCACAGGCTTTTCAACACTGTGTA +
Preference number: 3 (lower is better)
Translates to: SIPNYTVLCLVI*LFVSQAFQHCV
Trigger: TACACAGTGTTGAAAAGCCTGTGACACAAACAGTCATATTACCAAGCACAAGACAGTATAGTTTGGTATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGGTGATTCATACATCTaGTTAGAGTTTGCTCATGTT +
Preference number: 3 (lower is better)
Translates to: SNMQNRANAANQRFLKNSGDSYI*LEFAHV
Trigger: AACATGAGCAAACTCTAACAAGATGTATGAATCACC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGGTGATTCATACATCTaGTTAGAGTTTGCTCATGTT +
Preference number: 3 (lower is better)
Translates to: SSNMQNRANAANQRFLKNGDSYI*LEFAHV
Trigger: AACATGAGCAAACTCTAACAAGATGTATGAATCACC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR-3UTR CAA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAAATGCTACTCCCATATaGATCAGTTTAGAAGTTGGC +
Preference number: 3 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVNATPI*ISLEVG
Trigger: GCCAACTTCTAAACTGATCAATATGGGAGTAGCATT...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCACTGAGAGGCGGCAGTTaGGGGCAGGACGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSLRGGS*GQDDSR
Trigger: GCGGCTGTCGTCCTGCCCCCAACTGCCGCCTCTCAG...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGTGTGTCCTTCTCGCTaGGAGGCGGCAGTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSVCPSR*EAAVGG
Trigger: GCCCCCAACTGCCGCCTCTCAGCGAGAAGGACACAC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414706.2
CDS-3UTR GCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGCTGGGAGGCAGAGCTTaGAGTGAGCCACAATCGCGC +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRLGGRA*SEPQSR
Trigger: GCGCGATTGTGGCTCACTGCAAGCTCTGCCTCCCAG...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACAGACAGAGCGGCAGTTaGGGGCAGGACGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNRQSGS*GQDDSR
Trigger: GCGGCTGTCGTCCTGCCCCCAACTGCCGCTCTGTCT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252840.11
CDS-3UTR CCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGCTGAGGCAGGAGGATaGCGTGAATCTGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRAEAGG*RESGRQ
Trigger: CTGCCTCCCAGATTCACGCCATCCTCCTGCCTCAGC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGCTAGTCTTGAACTCCTaGCCTCAGGTGGTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRLVLNS*PQVVRL
Trigger: CAGGCGGACCACCTGAGGTCAGGAGTTCAAGACTAG...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGATTCTCCCAGACGCTaGAAGCGCGGCTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRDSPRR*KRGSSH
Trigger: GTGAGAAGAGCCGCGCTTGCAGCGTCTGGGAGAATC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGTTGCCCAGGCTGGAGTaGAGTGGGTCAACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRLPRLE*SGSTLA
Trigger: AGCCAAGGTTGACCCACTGCACTCCAGCCTGGGCAA...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGCAGGCTGGAGTGCAGTaGGTCAACCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRQAGVQ*VNLGSL
Trigger: CAGTGAGCCAAGGTTGACCCACTGCACTCCAGCCTG...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGGCTGCAGTGAGCTGTaGTCACACCACTGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSGCSEL*SHHCAP
Trigger: TGGAGCGCAGTGGTGTGATCACAGCTCACTGCAGCC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGCCAAGATTGCACCACTaGACTACAGCCTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRPRLHH*TTAWAQ
Trigger: CTGTGCCCAGGCTGTAGTGCAGTGGTGCAATCTTGG...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGAGCTGGGATTATAGATaGCTGCCACCACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRSWDYR*LPPHPA
Trigger: AGCCGGGTGTGGTGGCAGGCATCTATAATCCCAGCT...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGTGCCTTGTGAAGATTaGCTGAGTGCGGAACTCACG +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRVPCED*LSAELT
Trigger: CGTGAGTTCCGCACTCAGTCAATCTTCACAAGGCAC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGATTCGACCTCCTCCTaGAGGTTCTCCCACAATCGT +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRDSTSS*RFSHNR
Trigger: ACGATTGTGGGAGAACCTTCAGGAGGAGGTCGAATC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGTTTCCCGGGTTCAAGTaGTTCTCCTTCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRFPGFK*FSFLSL
Trigger: GAGGCTGAGGAAGGAGAATCACTTGAACCCGGGAAA...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGATTCTCCCAGACGCTaGAAGCGCGGCTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSDSPRR*KRGSSH
Trigger: GTGAGAAGAGCCGCGCTTGCAGCGTCTGGGAGAATC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCATTGCCCAGGCTGGAGTaGAGTGGGTCAACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSLPRLE*SGSTLA
Trigger: AGCCAAGGTTGACCCACTGCACTCCAGCCTGGGCAA...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGCTCTCTTGTGCCTTGTaGAGATTGACTGAGTGCGGA +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRLSCAL*RLTECG
Trigger: TCCGCACTCAGTCAATCTTCACAAGGCACAAGAGAG...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGGCTGCAGTGAGCTGTaGTCACACCACTGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVGCSEL*SHHCAP
Trigger: TGGAGCGCAGTGGTGTGATCACAGCTCACTGCAGCC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGGCAGGAGGATGGCGTaGATCTGGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVGRRMA*IWEAEL
Trigger: AAGCTCTGCCTCCCAGATTCACGCCATCCTCCTGCC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGAACCTCTGCCCAGTTTaGAGCAATTCTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRNLCPV*SNSPAS
Trigger: TGAGGCAGGAGAATTGCTTCAAACTGGGCAGAGGTT...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACAGACAGGCATGGTGGTaGATGCCTACAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNRQAWW*MPTVPA
Trigger: AGCTGGGACTGTAGGCATGCACCACCATGCCTGTCT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGATGATCTTGGCTCACTaGAACCTCCATTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRMILAH*NLHFPG
Trigger: ACCCGGGAAATGGAGGTTGCAGTGAGCCAAGATCAT...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACACCACGCCCAGCCCCTaGACTGTGGTTTTTATCACC +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNTTPSP*TVVFIT
Trigger: GGTGATAAAAACCACAGTGCAGGGGCTGGGCGTGGT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGAGGCCTACGTGATTTaGAAGCGCAGCTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSEAYVI*KRSSLG
Trigger: TCCAAGGGAGCTGCGCTTCCAAATCACGTAGGCCTC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCACCATGTTGGCCAGGCTaGTCTCAAGCTCCTTACCTC +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSPCWPG*SQAPYL
Trigger: GAGGTAAGGAGCTTGAGACCAGCCTGGCCAACATGG...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCCATGTTGGCCAGGCTaGTCTCAAGCTCCTTACCTC +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNPCWPG*SQAPYL
Trigger: GAGGTAAGGAGCTTGAGACCAGCCTGGCCAACATGG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGCTGAGGCAGGAGGATaGCGTGAATCTGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVAEAGG*RESGRQ
Trigger: CTGCCTCCCAGATTCACGCCATCCTCCTGCCTCAGC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
3UTR CAA 72 bp TATGCTTTCTGTGTTGGCTCCTTTAGATCACTGGCTTaGGGGAGAAGTTGCTTCCATAAAGAAACTCAGCCC +
Preference number: 4 (lower is better)
Translates to: YAFCVGSFRSLA*GRSCFHKETQP
Trigger: GGGCTGAGTTTCTTTATGGAAGCAACTTCTCCCCAAAGCCAGTGATCTAAAGGAGCCAACACAGAAAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGGTATGAGGAATTGCTaGAGGTTTTCCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRGMRNC*RFSHSH
Trigger: GTGACTGTGGGAAAACCTTCAGCAATTCCTCATACC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGTGCGGTCTGAGGTATaGGGAATTGCTGAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRVRSEV*GIAEGF
Trigger: AAAACCTTCAGCAATTCCTCATACCTCAGACCGCAC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGTGCGAAGAAAGAGATaGCCTCGTGCCGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNVRRKR*PRAESL
Trigger: AAGGCTTTCGGCACGAGGTCATCTCTTTCTTCGCAC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGATTCGACCTCCTCCTaGAGGTTCTCCCACAATCGT +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSDSTSS*RFSHNR
Trigger: ACGATTGTGGGAGAACCTTCAGGAGGAGGTCGAATC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGAAAATGAGGGTCAGCTaGAGGCTTTCCTCCACTGAT +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRKMRVS*RLSSTD
Trigger: ATCAGTGGAGGAAAGCCTTCAGCTGACCCTCATTTT...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCATTGAGCCCAGGAGTTTaGGAGCAGCCTGGGAAACAT +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSLSPGV*EQPGKH
Trigger: ATGTTTCCCAGGCTGCTCTCAAACTCCTGGGCTCAA...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCATTTCCCGGGTTCAAGTaGTTCTCCTTCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSFPGFK*FSFLSL
Trigger: GAGGCTGAGGAAGGAGAATCACTTGAACCCGGGAAA...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAAGCCTTCCAAGTAGCTaGGATTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSSLPSS*DYRHAP
Trigger: TGGCGCATGCCTGTAATCTCAGCTACTTGGAAGGCT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGAAAGAGATGACCTCGTaGCGAAAGCCTTTCCACACT +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRKEMTS*RKPFHT
Trigger: AGTGTGGAAAGGCTTTCGGCACGAGGTCATCTCTTT...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGTCTTCTTGCTCCAGCTaGGAGATCAGCCTAGGTTTA +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRSSCSS*EISLGL
Trigger: TAAACCTAGGCTGATCTCCCAGCTGGAGCAAGAAGA...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACATGAGCCATGGCGCCTaGCCCCACTGTACATTTTCA +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNMSHGA*PHCTFS
Trigger: TGAAAATGTACAGTGGGGCCAGGCGCCATGGCTCAT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGCTTGTGAAGATTGACTaGGTGCGGAACTCACGAAAA +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRLVKID*VRNSRK
Trigger: TTTTCGTGAGTTCCGCACTCAGTCAATCTTCACAAG...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGCCTGGGAAACATGGTaGATCCCCATCTTTACAAAA +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRAWETW*IPIFTK
Trigger: TTTTGTAAAGATGGGGATTCACCATGTTTCCCAGGC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAAGCTGGGATTATAGATaGCTGCCACCACACCCGGCT +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVSWDYR*LPPHPA
Trigger: AGCCGGGTGTGGTGGCAGGCATCTATAATCCCAGCT...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAAAGAAACAGTATTTGTaGCGGGCATGGTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSKKQYL*RAWWLT
Trigger: CGTGAGCCACCATGCCCGGCACAAATACTGTTTCTT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAACCACGCCCAGCCCCTaGACTGTGGTTTTTATCACC +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVTTPSP*TVVFIT
Trigger: GGTGATAAAAACCACAGTGCAGGGGCTGGGCGTGGT...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCTAGGTTTATCAACTTaGTTCCCCAGTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNLGLST*FPSEAR
Trigger: CCTGGCCTCACTGGGGAACCAAGTTGATAAACCTAG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGATCAGTTTAGAAGTTaGCTGGGCATGGTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRDQFRS*LGMVVH
Trigger: ATGAACCACCATGCCCAGCCAACTTCTAAACTGATC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGGTATGAGGAATTGCTaGAGGTTTTCCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNGMRNC*RFSHSH
Trigger: GTGACTGTGGGAAAACCTTCAGCAATTCCTCATACC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGTGCGGTCTGAGGTATaGGGAATTGCTGAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSVRSEV*GIAEGF
Trigger: AAAACCTTCAGCAATTCCTCATACCTCAGACCGCAC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGTGCCTTGTGAAGATTaGCTGAGTGCGGAACTCACG +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVVPCED*LSAELT
Trigger: CGTGAGTTCCGCACTCAGTCAATCTTCACAAGGCAC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGGTAGGGGGAAAGTTTaGGCTCAAAGTTTTACCATA +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRGRGKV*AQSFTI
Trigger: TATGGTAAAACTTTGAGCTCAAACTTTCCCCCTACC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCCTTCCTCAGCCTCTTaGGTAGCTGGGATTATAGAT +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNPSSAS*VAGIID
Trigger: ATCTATAATCCCAGCTACTCAAGAGGCTGAGGAAGG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAAGCCTTCCAAGTAGCTaGGATTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVSLPSS*DYRHAP
Trigger: TGGCGCATGCCTGTAATCTCAGCTACTTGGAAGGCT...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGACATTCGTTGAGTGTTaGTCCAAGATGATTCCTCTC +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRTFVEC*SKMIPL
Trigger: GAGAGGAATCATCTTGGAGCAACACTCAACGAATGT...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAAAAGAGATGACCTCGTaGCGAAAGCCTTTCCACACT +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSKEMTS*RKPFHT
Trigger: AGTGTGGAAAGGCTTTCGGCACGAGGTCATCTCTTT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGCTGGAGTGTGGTTGTaGAATCTCGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVAGVWL*NLGSLQ
Trigger: TTGCAGTGAGCCGAGATTGCACAACCACACTCCAGC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGCAGAACAGAGCCAATaGAGCCAATCAAAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRAEQSQ*SQSKVF
Trigger: AAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCTTCTTGCTCCAGCTaGGAGATCAGCCTAGGTTTA +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNSSCSS*EISLGL
Trigger: TAAACCTAGGCTGATCTCCCAGCTGGAGCAAGAAGA...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGTTAGATCACTGGCTTTaGGGAGAAGTTGCTTCCATA +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRLDHWL*GEVASI
Trigger: TATGGAAGCAACTTCTCCCCAAAGCCAGTGATCTAA...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGCTCCTTTAGATCACTaGCTTTGGGGAGAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSAPLDH*LWGEVA
Trigger: AGCAACTTCTCCCCAAAGCCAGTGATCTAAAGGAGC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACATCAGTGAGGATAGGTaGAACTTGAGGCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNISEDR*NLRLVS
Trigger: TGAAACCAGCCTCAAGTTTCACCTATCCTCACTGAT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAATCAGTGAGGATAGGTaGAACTTGAGGCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSISEDR*NLRLVS
Trigger: TGAAACCAGCCTCAAGTTTCACCTATCCTCACTGAT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCACTTGTGAAGATTGACTaGGTGCGGAACTCACGAAAA +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSLVKID*VRNSRK
Trigger: TTTTCGTGAGTTCCGCACTCAGTCAATCTTCACAAG...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTACTCTCTTGTGCCTTGTaGAGATTGACTGAGTGCGGA +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVLSCAL*RLTECG
Trigger: TCCGCACTCAGTCAATCTTCACAAGGCACAAGAGAG...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCACTGGTTTTCCATTTTTaGTGCCACACACAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSLVFHF*CHTQGF
Trigger: GAAACCCTGTGTGTGGCATCAAAAATGGAAAACCAG...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGAGGGCTTCCTCTAAATaGATTCTCTCATGCATAAAG +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRRASSK*ILSCIK
Trigger: CTTTATGCATGAGAGAATTCATTTAGAGGAAGCCCT...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGTACTGGCTAACACAGTaGAACCCCATTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRYWLTQ*NPISTK
Trigger: TTTAGTAGAAATGGGGTTTCACTGTGTTAGCCAGTA...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACATCACTTTATCTTCTTaGTCCAGCTGGGAGATCAGC +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNITLSS*SSWEIS
Trigger: GCTGATCTCCCAGCTGGAGCAAGAAGATAAAGTGAT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAATCACTTTATCTTCTTaGTCCAGCTGGGAGATCAGC +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSITLSS*SSWEIS
Trigger: GCTGATCTCCCAGCTGGAGCAAGAAGATAAAGTGAT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGTTTGTTCTAAGTTACTaGGTGGCCACTCAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRFVLSY*VATQLR
Trigger: TCTTAACTGAGTGGCCACGCAGTAACTTAGAACAAA...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAAAGAAACAGTATTTGTaGCGGGCATGGTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVKKQYL*RAWWLT
Trigger: CGTGAGCCACCATGCCCGGCACAAATACTGTTTCTT...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCGGTGTCTCACCCAGTaGGTTATTCCTACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNRCLTQ*VIPTSF
Trigger: AAAAGAAGTAGGAATAACGCACTGGGTGAGACACCG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTACTAGGTTTATCAACTTaGTTCCCCAGTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVLGLST*FPSEAR
Trigger: CCTGGCCTCACTGGGGAACCAAGTTGATAAACCTAG...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGGCAAGTTTTCCAGATaGTTCCAAATGTCTACTGTT +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRGKFSR*FQMSTV
Trigger: AACAGTAGACATTTGGAACCATCTGGAAAACTTGCC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGATCAGTTTAGAAGTTaGCTGGGCATGGTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSDQFRS*LGMVVH
Trigger: ATGAACCACCATGCCCAGCCAACTTCTAAACTGATC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGATAATGCATTCACCTaGAAGCTAACACAACACCCC +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNDNAFT*KLTQHP
Trigger: GGGGTGTTGTGTTAGCTTCCAGGTGAATGCATTATC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGATAATGCATTCACCTaGAAGCTAACACAACACCCC +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSDNAFT*KLTQHP
Trigger: GGGGTGTTGTGTTAGCTTCCAGGTGAATGCATTATC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAAGGATAGGTGAAACTTaGGGCTGGTTTCAACACAAA +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSRIGET*GWFQHK
Trigger: TTTGTGTTGAAACCAGCCTCAAGTTTCACCTATCCT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGATTTCTCTCTAGAGTaGGTTAACCTGTGGGTGATT +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSDFSLE*VNLWVI
Trigger: AATCACCCACAGGTTAACTCACTCTAGAGAGAAATC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGTATTCCTCTGTTGTATaGTCTCCGAAATGTGACTTA +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRYSSVV*SPKCDL
Trigger: TAAGTCACATTTCGGAGATCATACAACAGAGGAATA...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGAAATTAATACACTCGTaGGTATTGCATCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRKLIHS*VLHPRN
Trigger: GTTCCTTGGATGCAATACTCACGAGTGTATTAATTT...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGGCCCAACCTACAAATaGGACATTGATGAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSGPTYK*DIDEGN
Trigger: ATTACCTTCATCAATGTCTCATTTGTAGGTTGGGCC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGAACTCAAATCATTGTaGTTTTTCGGCACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRELKSL*FFGTVS
Trigger: AGAAACAGTGCCGAAAAATCACAATGATTTGAGTTC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAACTCCCCTGTATGAATaGTATAGTGCGAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSTPLYE*YSAKKE
Trigger: CTCTTTCTTCGCACTATAGCATTCATACAGGGGAGT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTATGGAAACAGCTAGCATaGACTTGTCGGGCTTGTAAG +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVWKQLA*TCRACK
Trigger: CTTACAAGCCCGACAAGTGCATGCTAGCTGTTTCCA...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGCTTTGGGGAGAAGTTaGTTCCATAAAGAAACTCAG +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNALGRS*FHKETQ
Trigger: CTGAGTTTCTTTATGGAAGCAACTTCTCCCCAAAGC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGGCATGAAAGATCAATaGATGCTTTTCCCACAGTTA +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSGMKDQ*MLFPQL
Trigger: TAACTGTGGGAAAAGCATTCATTGATCTTTCATGCC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCCTCTTGAGATATCCTaGAGAACTATAGAGCTATGT +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNPLEIS*RTIELC
Trigger: ACATAGCTCTATAGTTCTTCAGGATATCTCAAGAGG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGCCTGGGAAACATGGTaGATCCCCATCTTTACAAAA +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVAWETW*IPIFTK
Trigger: TTTTGTAAAGATGGGGATTCACCATGTTTCCCAGGC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAAGGGCTTCCTCTAAATaGATTCTCTCATGCATAAAG +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSRASSK*ILSCIK
Trigger: CTTTATGCATGAGAGAATTCATTTAGAGGAAGCCCT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTTTGTTCTAAGTTACTaGGTGGCCACTCAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNFVLSY*VATQLR
Trigger: TCTTAACTGAGTGGCCACGCAGTAACTTAGAACAAA...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAAGTTTGAGACTAGTCTaGGCAACATGGCAAAACCCT +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVSLRLV*ATWQNP
Trigger: AGGGTTTTGCCATGTTGCCCAGACTAGTCTCAAACT...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTATTGTGCTTGGTAATATaGCTGTTTGTGTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVLCLVI*LFVSQA
Trigger: AGCCTGTGACACAAACAGTCATATTACCAAGCACAA...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAAAATTAATACACTCGTaGGTATTGCATCCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSKLIHS*VLHPRN
Trigger: GTTCCTTGGATGCAATACTCACGAGTGTATTAATTT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGGCCCAACCTACAAATaGGACATTGATGAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVGPTYK*DIDEGN
Trigger: ATTACCTTCATCAATGTCTCATTTGTAGGTTGGGCC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGAACTCAAATCATTGTaGTTTTTCGGCACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNELKSL*FFGTVS
Trigger: AGAAACAGTGCCGAAAAATCACAATGATTTGAGTTC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAACTCCCCTGTATGAATaGTATAGTGCGAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVTPLYE*YSAKKE
Trigger: CTCTTTCTTCGCACTATAGCATTCATACAGGGGAGT...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACCACATTTGCCTATTATaGATTCTCGTATGCACAGAA +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNHICLL*ILVCTE
Trigger: TTCTGTGCATACGAGAATGCATAATAGGCAAATGTG...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTACTGTGGGTGATTGAATaGTACTCCCATATTGATCAG +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVLWVIE*YSHIDQ
Trigger: CTGATCAATATGGGAGTAGCATTCAATCACCCACAG...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTACACTCGTGAGTATTaGATCCAAGGAACATTTACA +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNYTREY*IQGTFT
Trigger: TGTAAATGTTCCTTGGATGCAATACTCACGAGTGTA...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCATACACTCGTGAGTATTaGATCCAAGGAACATTTACA +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSYTREY*IQGTFT
Trigger: TGTAAATGTTCCTTGGATGCAATACTCACGAGTGTA...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR GCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGCAGAACAGAGCCAATaGAGCCAATCAAAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVAEQSQ*SQSKVF
Trigger: AAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTATACTGGCTAACACAGTaGAACCCCATTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVYWLTQ*NPISTK
Trigger: TTTAGTAGAAATGGGGTTTCACTGTGTTAGCCAGTA...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAAACTCACGAAAACACTaGTTACATTTGTACGGTTTT +
Preference number: 4 (lower is better)
Translates to: SNMQNRANAANQRFLKNSNSRKH*LHLYGF
Trigger: AAAACCGTACAAATGTAACCAGTGTTTTCGTGAGTT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACAACTCACGAAAACACTaGTTACATTTGTACGGTTTT +
Preference number: 4 (lower is better)
Translates to: SSNMQNRANAANQRFLKNNSRKH*LHLYGF
Trigger: AAAACCGTACAAATGTAACCAGTGTTTTCGTGAGTT...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTATGTTCATACCTCCTGTaGTGTTCTTCCACATTGTAT +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVCSYLL*CSSTLY
Trigger: ATACAATGTGGAAGAACACCACAGGAGGTATGAACA...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR TCA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGAGCTATGTTGTTTCTaGATTCCTGACCTACAAAAA +
Preference number: 4 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVELCCF*IPDLQK
Trigger: TTTTTGTAGGTCAGGAATTCAGAAACAACATAGCTC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAAAGACAGAGCGGCAGTaGGGGGCAGGACGACAGCCG +
Preference number: 5 (lower is better)
Translates to: SNMQNRANAANQRFLKNSKTERQ*GAGRQP
Trigger: CGGCTGTCGTCCTGCCCCCAACTGCCGCTCTGTCTT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252840.11
CDS-3UTR CAA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGGGAAGCGCAGCTCCCTaGGAAACAGCTAGCATGCAC +
Preference number: 5 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRGSAAP*ETASMH
Trigger: GTGCATGCTAGCTGTTTCCAAGGGAGCTGCGCTTCC...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGCAAGCTGGAGTGTGGTaGTGCAATCTCGGCTCACTG +
Preference number: 5 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRQAGVW*CNLGSL
Trigger: CAGTGAGCCGAGATTGCACAACCACACTCCAGCTTG...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAGGAAGCGCAGCTCCCTaGGAAACAGCTAGCATGCAC +
Preference number: 5 (lower is better)
Translates to: SNMQNRANAANQRFLKNSGSAAP*ETASMH
Trigger: GTGCATGCTAGCTGTTTCCAAGGGAGCTGCGCTTCC...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGCATCACTTTATCTTCTaGCTCCAGCTGGGAGATCAG +
Preference number: 5 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRHHFIF*LQLGDQ
Trigger: CTGATCTCCCAGCTGGAGCAAGAAGATAAAGTGATG...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACGGGCAGGAGAATTACTaGATCCCAGGAAGTAGAGGC +
Preference number: 5 (lower is better)
Translates to: SSNMQNRANAANQRFLKNGQENY*IPGSRG
Trigger: GCCTCTACTTCCTGGGATCAAGTAATTCTCCTGCCC...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGTAGTCCCAGCTACATaGGAGGCTGGGGCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVVVPAT*EAGAGE
Trigger: TTCTCCTGCCCCAGCCTCCAATGTAGCTGGGACTAC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCAAGAAACTCAGCCCTGTaGAGAGGCCTACGTGATTTG +
Preference number: 5 (lower is better)
Translates to: SNMQNRANAANQRFLKNSRNSAL*RGLRDL
Trigger: CAAATCACGTAGGCCTCTCAACAGGGCTGAGTTTCT...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCACATCACTTTATCTTCTaGCTCCAGCTGGGAGATCAG +
Preference number: 5 (lower is better)
Translates to: SNMQNRANAANQRFLKNSHHFIF*LQLGDQ
Trigger: CTGATCTCCCAGCTGGAGCAAGAAGATAAAGTGATG...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGTGGTGTTCTTCCACATaGTATCAGGATTGGTGTGTA +
Preference number: 5 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRWCSST*YQDWCV
Trigger: TACACACCAATCCTGATACAATGTGGAAGAACACCA...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGGGCAGGAGAATTACTaGATCCCAGGAAGTAGAGGC +
Preference number: 5 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVGQENY*IPGSRG
Trigger: GCCTCTACTTCCTGGGATCAAGTAATTCTCCTGCCC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp AGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTCATACAATAAGCCAAGATaGCACCACTGCACTACAGCC +
Preference number: 5 (lower is better)
Translates to: SNMQNRANAANQRFLKNSYNKPR*HHCTTA
Trigger: GGCTGTAGTGCAGTGGTGCAATCTTGGCTTATTGTA...TGAGTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp TCTAGTAATATGCAGAACAGAGCCAATGCAGCCAATCAAAGGTTTTTGAAGAACTTTAGATCACTGGCTTaGGGGAGAAGTTGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SSNMQNRANAANQRFLKNFRSLA*GRSCFH
Trigger: ATGGAAGCAACTTCTCCCCAAAGCCAGTGATCTAAA...GTTCTTCAAAAACCTTTGATTGGCTGCATTGGCTCTGTTCTGCATATTACTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGCACATTGTATCAGGATaGGTGTGTATGACCAATGTA +
Preference number: 5 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRHIVSG*VCMTNV
Trigger: TACATTGGTCATACACACCAATCCTGATACAATGTG...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp TTCCAAATGTCTACTGTTCATACCTCCTGTGGTGTTCTTCCACATTGTATCAGGCAACATATTCCTCTGTaGTATGATCTCCGAAATGTG +
Preference number: 5 (lower is better)
Translates to: FQMSTVHTSCGVLPHCIRQHIPL*YDLRNV
Trigger: CACATTTCGGAGATCATACAACAGAGGAATATGTTG...CCTGATACAATGTGGAAGAACACCACAGGAGGTATGAACAGTAGACATTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTACACGAGGTCAGGAGATaGAGACCATACTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVHEVRR*RPYWLT
Trigger: TGTTAGCCAGTATGGTCTCAATCTCCTGACCTCGTG...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAATTATGCTTTCTGTGTaGGCTCCTTTAGATCACTGG +
Preference number: 5 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVIMLSV*APLDHW
Trigger: CCAGTGATCTAAAGGAGCCAACACAGAAAGCATAAT...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTACAACATATTCCTCTGTaGTATGATCTCCGAAATGTG +
Preference number: 5 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVQHIPL*YDLRNV
Trigger: CACATTTCGGAGATCATACAACAGAGGAATATGTTG...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2
CDS-3UTR CAA 90 bp GAGAATATTCAAGGCTTTTATAGCATACCAAACTATACTGTCTTGTGCTTGGTAGGTGATTCATACATCTaGTTAGAGTTTGCTCATGTT +
Preference number: 5 (lower is better)
Translates to: ENIQGFYSIPNYTVLCLVGDSYI*LEFAHV
Trigger: AACATGAGCAAACTCTAACAAGATGTATGAATCACC...TACCAAGCACAAGACAGTATAGTTTGGTATGCTATAAAAGCCTTGAATATTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252840.11
ENST00000414706.2