Pregenerated sensors for ZNF552 (Homo sapiens)
Ensembl gene IDs: ENSG00000178935Ensembl transcript IDs: ENST00000391701.1, ENST00000596248.1, ENST00000600397.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CGAGGTCAGGAGATTGAGAACTTCCTGGCTAACAGGGTGAAACCCCATCTCTACCCAGGAGGCAGGGCTTaGAGTGAGCCGAGATTATGC | + |
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Preference number: 2 (lower is better) Translates to: RGQEIENFLANRVKPHLYPGGRA*SEPRLC Trigger: GCATAATCTCGGCTCACTGCAAGCCCTGCCTCCTGG...GTAGAGATGGGGTTTCACCCTGTTAGCCAGGAAGTTCTCAATCTCCTGACCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| 3UTR-3UTR TCA 90 bp | CGAGGTCAGGAGATTGAGAACTTCCTGGCTAACAGGGTGAAACCCCATCTCTACAGCAATCCTCCCACATaGCAGCTCTCCTGTGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: RGQEIENFLANRVKPHLYSNPPT*QLSCEL Trigger: TAACTCACAGGAGAGCTGTCATGTGGGAGGATTGCT...GTAGAGATGGGGTTTCACCCTGTTAGCCAGGAAGTTCTCAATCTCCTGACCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| 3UTR-3UTR GCA 90 bp | CGAGGTCAGGAGATTGAGAACTTCCTGGCTAACAGGGTGAAACCCCATCTCTACACTGGACTGCAGTGTTaGAATCTCGGCTCACTGCAA | + |
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Preference number: 2 (lower is better) Translates to: RGQEIENFLANRVKPHLYTGLQC*NLGSLQ Trigger: TTGCAGTGAGCCGAGATTGCAACACTGCAGTCCAGT...GTAGAGATGGGGTTTCACCCTGTTAGCCAGGAAGTTCTCAATCTCCTGACCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| 3UTR-3UTR TCA 90 bp | CGAGGTCAGGAGATTGAGAACTTCCTGGCTAACAGGGTGAAACCCCATCTCTACGACTCTTCTCTAGTGTaGACTCTCCAATATCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: RGQEIENFLANRVKPHLYDSSLV*TLQYPR Trigger: CCTTGGATATTGGAGAGTTCACACTAGAGAAGAGTC...GTAGAGATGGGGTTTCACCCTGTTAGCCAGGAAGTTCTCAATCTCCTGACCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTAAATCAATGGTTGTCTGCATAGAGAAAAACTTTATAAAGGCTCCAGGTGGCAGGAGAATGGCATaGACCCAGGAGGCAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: QSKSMVVCIEKNFIKAPGGRRMA*TQEAGL Trigger: AAGCCCTGCCTCCTGGGTTCATGCCATTCTCCTGCC...ACCTGGAGCCTTTATAAAGTTTTTCTCTATGCAGACAACCATTGATTTACTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGATGATGGTTTCATGGGATTATAAGAAAATTCAAGCCAGGAGCAGTGGCAGTGAGCCGAGATTATaGCACTGTACTCCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TLMMVSWDYKKIQARSSGSEPRL*HCTPAW Trigger: CCAGGCTGGAGTACAGTGGCATAATCTCGGCTCACT...GCCACTGCTCCTGGCTTGAATTTTCTTATAATCCCATGAAACCATCATCAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTAAATCAATGGTTGTCTGCATAGAGAAAAACTTTATAAAGGCTCCAGGTTGGTCCAGACTGGACTaGAGTGTTGCAATCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: QSKSMVVCIEKNFIKAPGWSRLD*SVAISA Trigger: AGCCGAGATTGCAACACTGCAGTCCAGTCTGGACCA...ACCTGGAGCCTTTATAAAGTTTTTCTCTATGCAGACAACCATTGATTTACTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTAAATCAATGGTTGTCTGCATAGAGAAAAACTTTATAAAGGCTCCAGGTCCTACAGCTCAAATATaGATACTTTATTGGATGTCA | + |
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Preference number: 2 (lower is better) Translates to: QSKSMVVCIEKNFIKAPGPTAQI*ILYWMS Trigger: TGACATCCAATAAAGTATGCATATTTGAGCTGTAGG...ACCTGGAGCCTTTATAAAGTTTTTCTCTATGCAGACAACCATTGATTTACTCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| 3UTR-3UTR CAA 90 bp | ACTCTGATGATGGTTTCATGGGATTATAAGAAAATTCAAGCCAGGAGCAGTGGCTGCAATCCCAACACTTaGAGAGGCCAAGGCGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: TLMMVSWDYKKIQARSSGCNPNT*RGQGGQ Trigger: CTGCCCGCCTTGGCCTCTCAAAGTGTTGGGATTGCA...GCCACTGCTCCTGGCTTGAATTTTCTTATAATCCCATGAAACCATCATCAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| 3UTR-3UTR CAA 90 bp | CAGAGTAAATCAATGGTTGTCTGCATAGAGAAAAACTTTATAAAGGCTCCAGGTCACGAGGTCAGGAGATaGAGAACTTCCTGGCTAACA | + |
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Preference number: 3 (lower is better) Translates to: QSKSMVVCIEKNFIKAPGHEVRR*RTSWLT Trigger: TGTTAGCCAGGAAGTTCTCAATCTCCTGACCTCGTG...ACCTGGAGCCTTTATAAAGTTTTTCTCTATGCAGACAACCATTGATTTACTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| CDS-3UTR CCA 90 bp | CGAGGTCAGGAGATTGAGAACTTCCTGGCTAACAGGGTGAAACCCCATCTCTACCCACGTGGGGTAAGCTaGGTTGAGAGCAGCGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RGQEIENFLANRVKPHLYPRGVS*VESSGR Trigger: GCGCCCGCTGCTCTCAACCCAGCTTACCCCACGTGG...GTAGAGATGGGGTTTCACCCTGTTAGCCAGGAAGTTCTCAATCTCCTGACCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| CDS-3UTR TCA 90 bp | CGAGGTCAGGAGATTGAGAACTTCCTGGCTAACAGGGTGAAACCCCATCTCTACTGGGGTAAGCTGGGTTaGGAGCAGCGGGCGCCGTTA | + |
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Preference number: 4 (lower is better) Translates to: RGQEIENFLANRVKPHLYWGKLG*EQRAPL Trigger: TAACGGCGCCCGCTGCTCTCAACCCAGCTTACCCCA...GTAGAGATGGGGTTTCACCCTGTTAGCCAGGAAGTTCTCAATCTCCTGACCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| CDS-3UTR CCA 90 bp | CGAGGTCAGGAGATTGAGAACTTCCTGGCTAACAGGGTGAAACCCCATCTCTACCGACTCTCGACCTCCTaGATCCAGTCACCACCACGG | + |
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Preference number: 4 (lower is better) Translates to: RGQEIENFLANRVKPHLYRLSTS*IQSPPR Trigger: CCGTGGTGGTGACTGGATCCAGGAGGTCGAGAGTCG...GTAGAGATGGGGTTTCACCCTGTTAGCCAGGAAGTTCTCAATCTCCTGACCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| CDS-3UTR GCA 90 bp | CGAGGTCAGGAGATTGAGAACTTCCTGGCTAACAGGGTGAAACCCCATCTCTACAGTGAGCCGAGATTATaGCACTGTACTCCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RGQEIENFLANRVKPHLYSEPRL*HCTPAW Trigger: CCAGGCTGGAGTACAGTGGCATAATCTCGGCTCACT...GTAGAGATGGGGTTTCACCCTGTTAGCCAGGAAGTTCTCAATCTCCTGACCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| CDS-3UTR GCA 90 bp | ACTCTGATGATGGTTTCATGGGATTATAAGAAAATTCAAGCCAGGAGCAGTGGCCCAGGAGGCAGGGCTTaGAGTGAGCCGAGATTATGC | + |
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Preference number: 4 (lower is better) Translates to: TLMMVSWDYKKIQARSSGPGGRA*SEPRLC Trigger: GCATAATCTCGGCTCACTGCAAGCCCTGCCTCCTGG...GCCACTGCTCCTGGCTTGAATTTTCTTATAATCCCATGAAACCATCATCAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| CDS-3UTR TCA 90 bp | ACTCTGATGATGGTTTCATGGGATTATAAGAAAATTCAAGCCAGGAGCAGTGGCTGGCTTTTTCCCCCATaGAACAGAGACACACACTCA | + |
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Preference number: 4 (lower is better) Translates to: TLMMVSWDYKKIQARSSGWLFPP*NRDTHS Trigger: TGAGTGTGTGTCTCTGTTTCATGGGGGAAAAAGCCA...GCCACTGCTCCTGGCTTGAATTTTCTTATAATCCCATGAAACCATCATCAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| CDS-3UTR TCA 90 bp | ACTCTGATGATGGTTTCATGGGATTATAAGAAAATTCAAGCCAGGAGCAGTGGCAGCAGTCTCTCGTGCTaGCTGAGTATATCTTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: TLMMVSWDYKKIQARSSGSSLSC*LSISLV Trigger: CACCAAAGATATACTCAGTCAGCACGAGAGACTGCT...GCCACTGCTCCTGGCTTGAATTTTCTTATAATCCCATGAAACCATCATCAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| CDS-3UTR GCA 90 bp | CGAGGTCAGGAGATTGAGAACTTCCTGGCTAACAGGGTGAAACCCCATCTCTACCCTACAGCTCAAATATaGATACTTTATTGGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: RGQEIENFLANRVKPHLYPTAQI*ILYWMS Trigger: TGACATCCAATAAAGTATGCATATTTGAGCTGTAGG...GTAGAGATGGGGTTTCACCCTGTTAGCCAGGAAGTTCTCAATCTCCTGACCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| CDS-3UTR GCA 90 bp | CAGAGTAAATCAATGGTTGTCTGCATAGAGAAAAACTTTATAAAGGCTCCAGGTGCGCCGTTAAAGAGCTaGAGAGTCACGTCTGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: QSKSMVVCIEKNFIKAPGAPLKS*RVTSVQ Trigger: TTGCACAGACGTGACTCTGCAGCTCTTTAACGGCGC...ACCTGGAGCCTTTATAAAGTTTTTCTCTATGCAGACAACCATTGATTTACTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| CDS-3UTR GCA 90 bp | CAGAGTAAATCAATGGTTGTCTGCATAGAGAAAAACTTTATAAAGGCTCCAGGTGCAGAGTCACGTCTGTaGAAAGAGAAGAACGACTCT | + |
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Preference number: 4 (lower is better) Translates to: QSKSMVVCIEKNFIKAPGAESRL*KEKNDS Trigger: AGAGTCGTTCTTCTCTTTGCACAGACGTGACTCTGC...ACCTGGAGCCTTTATAAAGTTTTTCTCTATGCAGACAACCATTGATTTACTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| CDS-3UTR TCA 90 bp | ACTCTGATGATGGTTTCATGGGATTATAAGAAAATTCAAGCCAGGAGCAGTGGCCTGATGATGACGAAGTaGAGAGATTTGCCTAAATTT | + |
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Preference number: 4 (lower is better) Translates to: TLMMVSWDYKKIQARSSGLMMTK*RDLPKF Trigger: AAATTTAGGCAAATCTCTTCACTTCGTCATCATCAG...GCCACTGCTCCTGGCTTGAATTTTCTTATAATCCCATGAAACCATCATCAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391701.1 |
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| CDS CCA 90 bp | TGCAGAGTCACGTCTGTGCAAAGAGAAGAACGACTCTCGACCTCCTaGATCCAGTCACCACCACGGTCCCAACACAGCGCTCCAAGGACT | + |
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Preference number: 5 (lower is better) Translates to: CRVTSVQREERLSTS*IQSPPRSQHSAPRT Trigger: AGTCCTTGGAGCGCTGTGTTGGGACCGTGGTGGTGACTGGATCCAGGAGGTCGAGAGTCGTTCTTCTCTTTGCACAGACGTGACTCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000391701.1 ENST00000596248.1 ENST00000600397.1 |
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| CDS CCA 72 bp | ACGTCTGTGCAAAGAGAAGAACGACTCTCGACCTCCTaGATCCAGTCACCACCACGGTCCCAACACAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: TSVQREERLSTS*IQSPPRSQHSA Trigger: AGCGCTGTGTTGGGACCGTGGTGGTGACTGGATCCAGGAGGTCGAGAGTCGTTCTTCTCTTTGCACAGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000391701.1 ENST00000596248.1 ENST00000600397.1 |
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