RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF550 (Homo sapiens)

Ensembl gene IDs: ENSG00000251369

Ensembl transcript IDs: ENST00000344222.5, ENST00000376230.7, ENST00000447310.5, ENST00000457177.5, ENST00000506609.2, ENST00000595560.1, ENST00000601415.5

Found 357 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGTACAGCCACAGCTACAATACATGCAGCCTTCCAGAGAGAGGATaGAGGAGGGTGGGGGTCCTCAAGAGTCAACTCTCCTTCCCACAG +
Preference number: 1 (lower is better)
Translates to: KYSHSYNTCSLPERG*RRVGVLKSQLSFPQ
Trigger: CTGTGGGAAGGAGAGTTGACTCTTGAGGACCCCCACCCTCCTGCATCCTCTCTCTGGAAGGCTGCATGTATTGTAGCTGTGGCTGTACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR GCA 90 bp CTGTTCTCATGTGTTTTTCCTATATTAGACAGTAAGTTCCTTCCCTaGTCAAGGGCAGGACCCATAGCCCAGCCATCCACTGCATCCCAC +
Preference number: 1 (lower is better)
Translates to: LFSCVFPILDSKFLP*SRAGPIAQPSTASH
Trigger: GTGGGATGCAGTGGATGGCTGGGCTATGGGTCCTGCCCTTGAGCAGGGAAGGAACTTACTGTCTAATATAGGAAAAACACATGAGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
3UTR CCA 90 bp AAACACTCCTGCTTTGGGACAAACTGGGGCCTAGGTCCTCAGGCCTaGAAAGAACCCTTTGATGACAGCCAATATGTTTCTAGAGGGGTT +
Preference number: 1 (lower is better)
Translates to: KHSCFGTNWGLGPQA*KEPFDDSQYVSRGV
Trigger: AACCCCTCTAGAAACATATTGGCTGTCATCAAAGGGTTCTTTCCAGGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR CCA 90 bp TGTTCCATGCTTCTATCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTaGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCT +
Preference number: 1 (lower is better)
Translates to: CSMLLSRLLVAPCVP*LEDVLPVSSHRLPS
Trigger: AGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGATAGAAGCATGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR TCA 90 bp TCCACATTTCCCCCTGGTATGAATCCTTCTGCAATGAGTGAGAACTaGGTGGTGACTGAAGGGATCCTTACATTCACTGTATTCACAGGG +
Preference number: 1 (lower is better)
Translates to: STFPPGMNPSAMSEN*VVTEGILTFTVFTG
Trigger: CCCTGTGAATACAGTGAATGTAAGGATCCCTTCAGTCACCACTCAGTTCTCACTCATTGCAGAAGGATTCATACCAGGGGGAAATGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR TCA 90 bp ACTCTTCTAAGTATGACCACAACAGTGAGTGGCCATGGAGCTAAATaGCAGGTGTCTCATGAGATTCTTGCCTATCACAGCAGCAAGTTC +
Preference number: 1 (lower is better)
Translates to: TLLSMTTTVSGHGAK*QVSHEILAYHSSKF
Trigger: GAACTTGCTGCTGTGATAGGCAAGAATCTCATGAGACACCTGTCATTTAGCTCCATGGCCACTCACTGTTGTGGTCATACTTAGAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
3UTR TCA 90 bp GTGAATAATAACCACAGCAATTTCAAGACACACAGGCTTCCATTGTaGGATGGCTTGTTTAAAGAAACTATTAATTCCCTACACTCTTCT +
Preference number: 1 (lower is better)
Translates to: VNNNHSNFKTHRLPL*DGLFKETINSLHSS
Trigger: AGAAGAGTGTAGGGAATTAATAGTTTCTTTAAACAAGCCATCTCACAATGGAAGCCTGTGTGTCTTGAAATTGCTGTGGTTATTATTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR TCA 90 bp TCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTGGCTTGAAGATGTTCTTCCTGTGGGCGGGTGGACTACATaGGGTCAAGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: SRLLVAPCVPWLEDVLPVGGWTT*GQEFKT
Trigger: GGTCTTGAACTCTTGACCTCATGTAGTCCACCCGCC...CACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
3UTR-3UTR CCA 90 bp CTTGAACCCAGGGCCTTAGGTACAAGTACAGCCACAGCTACAATACATGCAGCCGAGAAAATCCCAAGGTaGGTCAAATTCCAGCATGGC +
Preference number: 2 (lower is better)
Translates to: LEPRALGTSTATATIHAAEKIPR*VKFQHG
Trigger: GCCATGCTGGAATTTGACCCACCTTGGGATTTTCTC...GGCTGCATGTATTGTAGCTGTGGCTGTACTTGTACCTAAGGCCCTGGGTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR TCA 90 bp TCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTGGCTTGAAGATGTTCTTCCTGTGTATAGGACAAGCAAGTaGCAACCTGGTCACAAAGTT +
Preference number: 2 (lower is better)
Translates to: SRLLVAPCVPWLEDVLPVYRTSK*QPGHKV
Trigger: AACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATA...CACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR TCA 90 bp TTTCCTATATTAGACAGTAAGTTCCTTCCCTGCTCAAGGGCAGGACCCATAGCCGAACTGAGTGGTGACTaGAGGGATCCTTACATTCAC +
Preference number: 2 (lower is better)
Translates to: FPILDSKFLPCSRAGPIAELSGD*RDPYIH
Trigger: GTGAATGTAAGGATCCCTTCAGTCACCACTCAGTTC...GGCTATGGGTCCTGCCCTTGAGCAGGGAAGGAACTTACTGTCTAATATAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
3UTR-3UTR GCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGCATGGAAAACACTCCTaGTTTGGGACAAACTGGGGC +
Preference number: 2 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLHGKHS*FGTNWG
Trigger: GCCCCAGTTTGTCCCAAAGCAGGAGTGTTTTCCATG...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR CCA 90 bp AGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAAGGGCAGTGCTTTGGGACAAACTaGGGCCTAGGTCCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: RHKHLTLPYEFLQFFKGQCFGTN*GLGPQA
Trigger: GGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCA...CTGCCCTTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR CCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGAAAACACTCCTGCTTTaGGACAAACTGGGGCCTAGG +
Preference number: 2 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLKTLLL*DKLGPR
Trigger: CCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTT...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR TCA 90 bp GAGTTCTCTGATGTTGATGGAATGCCTTCCACATTTCCCCCTGGTATGAATCCTGAACTGAGTGGTGACTaGAGGGATCCTTACATTCAC +
Preference number: 2 (lower is better)
Translates to: EFSDVDGMPSTFPPGMNPELSGD*RDPYIH
Trigger: GTGAATGTAAGGATCCCTTCAGTCACCACTCAGTTC...AGGATTCATACCAGGGGGAAATGTGGAAGGCATTCCATCAACATCAGAGAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR TCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGGGCCATGGAGCTAAATaGCAGGTGTCTCATGAGATT +
Preference number: 2 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLGHGAK*QVSHEI
Trigger: AATCTCATGAGACACCTGTCATTTAGCTCCATGGCC...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
3UTR-3UTR TCA 90 bp TCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTGGCTTGAAGATGTTCTTCCTGTGCTTAACATTGCCCTATaGATTTCTGCAGTTCTTCAA +
Preference number: 2 (lower is better)
Translates to: SRLLVAPCVPWLEDVLPVLNIAL*ISAVLQ
Trigger: TTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAG...CACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR TCA 90 bp ATAACTAGTCCCACCCCCACAATCATTTCTCACAGATTAAGCAGCATAAGAGCAGTGAGAACTGAGTGGTaGCTGAAGGGATCCTTACAT +
Preference number: 2 (lower is better)
Translates to: ITSPTPTIISHRLSSIRAVRTEW*LKGSLH
Trigger: ATGTAAGGATCCCTTCAGTCACCACTCAGTTCTCAC...TGCTCTTATGCTGCTTAATCTGTGAGAAATGATTGTGGGGGTGGGACTAGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344222.5
3UTR-3UTR TCA 90 bp TCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACAGGCTTGCAATGAGTGAGAACTaGGTGGTGACTGAAGGGATC +
Preference number: 2 (lower is better)
Translates to: SSKGRVNNNHSNFKTHRLAMSEN*VVTEGI
Trigger: GATCCCTTCAGTCACCACTCAGTTCTCACTCATTGC...AAGCCTGTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR CCA 90 bp CACAGTGATACAGAAACACTTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTAGAGAAAATCCCAAGGTaGGTCAAATTCCAGCATGGC +
Preference number: 2 (lower is better)
Translates to: HSDTETLLSILWERKGNVEKIPR*VKFQHG
Trigger: GCCATGCTGGAATTTGACCCACCTTGGGATTTTCTC...TACATTGCCCTTCCTCTCCCATAAGATGGACAAAAGTGTTTCTGTATCACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR CCA 90 bp TTTTGGAGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAATGCTTTGGGACAAACTaGGGCCTAGGTCCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: FWRHKHLTLPYEFLQFFKCFGTN*GLGPQA
Trigger: GGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCA...TTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCTCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR CCA 90 bp ACTATTAATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGTGCTTTGGGACAAACTaGGGCCTAGGTCCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: TINSLHSSDHSVVHIHFRCFGTN*GLGPQA
Trigger: GGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCA...CCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAATTAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR CCA 90 bp GTACCAAACACTTCAGTGAAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAAACAAAACACTCCTGCTTTaGGACAAACTGGGGCCTAGG +
Preference number: 2 (lower is better)
Translates to: VPNTSVKTVWKELEAKKNKTLLL*DKLGPR
Trigger: CCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTT...GTTTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR CCA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTAAAACACTCCTGCTTTaGGACAAACTGGGGCCTAGG +
Preference number: 2 (lower is better)
Translates to: KQPRHFLLEHMFHASISAKTLLL*DKLGPR
Trigger: CCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTT...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR TCA 90 bp TCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACAGGCTTGGCCATGGAGCTAAATaGCAGGTGTCTCATGAGATT +
Preference number: 2 (lower is better)
Translates to: SSKGRVNNNHSNFKTHRLGHGAK*QVSHEI
Trigger: AATCTCATGAGACACCTGTCATTTAGCTCCATGGCC...AAGCCTGTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
3UTR-3UTR GCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGTTTCCTGACATTCTTTaGATTCGAAGGACTTCTTCC +
Preference number: 2 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLFPDIL*IRRTSS
Trigger: GGAAGAAGTCCTTCGAATGCAAAGAATGTCAGGAAA...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR GCA 90 bp AGCAGCAAGTTCATAGTAGATCCTTGTACCAAACACTTCAGTGAAGACTGTATGCACAGCTACAATACATaGAGCCTTCCAGAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: SSKFIVDPCTKHFSEDCMHSYNT*SLPERG
Trigger: TCCTCTCTCTGGAAGGCTGCATGTATTGTAGCTGTG...CATACAGTCTTCACTGAAGTGTTTGGTACAAGGATCTACTATGAACTTGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR GCA 90 bp ACTGAAGGTTTTCATAAGTTCATAGAGAAAATCCCAAGGTGGGTCAAATTCCAGCTGATGTTGATGGAATaGCTTCCACATTTCCCCCTG +
Preference number: 2 (lower is better)
Translates to: TEGFHKFIEKIPRWVKFQLMLME*LPHFPL
Trigger: CAGGGGGAAATGTGGAAGGCATTCCATCAACATCAG...CTGGAATTTGACCCACCTTGGGATTTTCTCTATGAACTTATGAAAACCTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR GCA 90 bp GGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGTCCATCCATGGAAAACACTCCTaGTTTGGGACAAACTGGGGC +
Preference number: 2 (lower is better)
Translates to: GNSKYCLGHSDTETLLSIHGKHS*FGTNWG
Trigger: GCCCCAGTTTGTCCCAAAGCAGGAGTGTTTTCCATG...GATGGACAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR GCA 90 bp ATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGATTTCTCCATGGAAAACACTCCTaGTTTGGGACAAACTGGGGC +
Preference number: 2 (lower is better)
Translates to: IPYTLLITLLFTFILGFLHGKHS*FGTNWG
Trigger: GCCCCAGTTTGTCCCAAAGCAGGAGTGTTTTCCATG...GAGAAATCCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR GCA 90 bp GGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGTCCATCAGTAAGTTCCTTCCCTaGTCAAGGGCAGGACCCATA +
Preference number: 2 (lower is better)
Translates to: GNSKYCLGHSDTETLLSISKFLP*SRAGPI
Trigger: TATGGGTCCTGCCCTTGAGCAGGGAAGGAACTTACT...GATGGACAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447310.5
3UTR-3UTR TCA 90 bp TTTATAGGACAAGCAAGTGACAACCTGGTCACAAAGTTTTCTCACATCAATAACGAACTGAGTGGTGACTaGAGGGATCCTTACATTCAC +
Preference number: 2 (lower is better)
Translates to: FIGQASDNLVTKFSHINNELSGD*RDPYIH
Trigger: GTGAATGTAAGGATCCCTTCAGTCACCACTCAGTTC...GTTATTGATGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR TCA 90 bp AAGCTGGGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGGTGAGAACTGAGTGGTaGCTGAAGGGATCCTTACAT +
Preference number: 2 (lower is better)
Translates to: KLGNSKYCLGHSDTETLLVRTEW*LKGSLH
Trigger: ATGTAAGGATCCCTTCAGTCACCACTCAGTTCTCAC...CAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACCCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR TCA 90 bp TTTTGGAGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAAGCAATGAGTGAGAACTaGGTGGTGACTGAAGGGATC +
Preference number: 2 (lower is better)
Translates to: FWRHKHLTLPYEFLQFFKAMSEN*VVTEGI
Trigger: GATCCCTTCAGTCACCACTCAGTTCTCACTCATTGC...TTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCTCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR TCA 90 bp ACTATTAATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGGCAATGAGTGAGAACTaGGTGGTGACTGAAGGGATC +
Preference number: 2 (lower is better)
Translates to: TINSLHSSDHSVVHIHFRAMSEN*VVTEGI
Trigger: GATCCCTTCAGTCACCACTCAGTTCTCACTCATTGC...CCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAATTAATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR TCA 90 bp ACTAGATCACCATATGACCTAGCCATTCAGCTGCAAGGTACATTTCTCATGTATTATAGGACAAGCAAGTaGCAACCTGGTCACAAAGTT +
Preference number: 2 (lower is better)
Translates to: TRSPYDLAIQLQGTFLMYYRTSK*QPGHKV
Trigger: AACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATA...ATACATGAGAAATGTACCTTGCAGCTGAATGGCTAGGTCATATGGTGATCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR CCA 90 bp ATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGATTTCTCGAGAAAATCCCAAGGTaGGTCAAATTCCAGCATGGC +
Preference number: 2 (lower is better)
Translates to: IPYTLLITLLFTFILGFLEKIPR*VKFQHG
Trigger: GCCATGCTGGAATTTGACCCACCTTGGGATTTTCTC...GAGAAATCCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR CCA 90 bp TTTTGGAGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAACTAGGTCCTCAGGCCTaGAAAGAACCCTTTGATGAC +
Preference number: 2 (lower is better)
Translates to: FWRHKHLTLPYEFLQFFKLGPQA*KEPFDD
Trigger: GTCATCAAAGGGTTCTTTCCAGGCCTGAGGACCTAG...TTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCTCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR CCA 90 bp CATTGTGAGATGGCTTGTTTAAAGAAACTATTAATTCCCTACACTCTTCTGATCCTAGGTCCTCAGGCCTaGAAAGAACCCTTTGATGAC +
Preference number: 2 (lower is better)
Translates to: HCEMACLKKLLIPYTLLILGPQA*KEPFDD
Trigger: GTCATCAAAGGGTTCTTTCCAGGCCTGAGGACCTAG...GATCAGAAGAGTGTAGGGAATTAATAGTTTCTTTAAACAAGCCATCTCACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR CCA 90 bp TGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACTCAGTGAAGACTGTATaGAAAGAGCTGGAAGCTAAG +
Preference number: 2 (lower is better)
Translates to: CSSSKGRVNNNHSNFKTHSVKTV*KELEAK
Trigger: CTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGA...GTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR CCA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTCTTCCAAATCACTTCTaGTGCTTTCCTTCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: KQPRHFLLEHMFHASISALPNHF*CFPSCF
Trigger: GAAGCAAGAAGGAAAGCACCAGAAGTGATTTGGAAG...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR GCA 90 bp GTACCAAACACTTCAGTGAAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAAACTTTCCTGACATTCTTTaGATTCGAAGGACTTCTTCC +
Preference number: 2 (lower is better)
Translates to: VPNTSVKTVWKELEAKKNFPDIL*IRRTSS
Trigger: GGAAGAAGTCCTTCGAATGCAAAGAATGTCAGGAAA...GTTTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR CCA 90 bp ATAACCACAGCAATTTCAAGACACACAGGCTTCCATTGTGAGATGGCTTGTTTAGTAAGATTTCTGCTCTaGCCAAAGACTGTCCTTAAT +
Preference number: 2 (lower is better)
Translates to: ITTAISRHTGFHCEMACLVRFLL*PKTVLN
Trigger: ATTAAGGACAGTCTTTGGCCAGAGCAGAAATCTTAC...TAAACAAGCCATCTCACAATGGAAGCCTGTGTGTCTTGAAATTGCTGTGGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR CCA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTGTAAGATTTCTGCTCTaGCCAAAGACTGTCCTTAAT +
Preference number: 2 (lower is better)
Translates to: KQPRHFLLEHMFHASISAVRFLL*PKTVLN
Trigger: ATTAAGGACAGTCTTTGGCCAGAGCAGAAATCTTAC...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR CCA 90 bp GTACCAAACACTTCAGTGAAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAAACAAGCAAGTGACAACCTaGTCACAAAGTTTTCTCACA +
Preference number: 2 (lower is better)
Translates to: VPNTSVKTVWKELEAKKNKQVTT*SQSFLT
Trigger: TGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTT...GTTTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR CCA 90 bp CTTACAAATATTAAGATTTCTAATTCGTCTTTGCATGACCGACTTGCCGAGTTAGAGAAAATCCCAAGGTaGGTCAAATTCCAGCATGGC +
Preference number: 2 (lower is better)
Translates to: LTNIKISNSSLHDRLAELEKIPR*VKFQHG
Trigger: GCCATGCTGGAATTTGACCCACCTTGGGATTTTCTC...TAACTCGGCAAGTCGGTCATGCAAAGACGAATTAGAAATCTTAATATTTGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344222.5
3UTR-3UTR CCA 90 bp AAGCTGGGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGGTGTCCTTTATCCCATaGAAAACACTCCTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: KLGNSKYCLGHSDTETLLVSFIP*KTLLLW
Trigger: CCAAAGCAGGAGTGTTTTCCATGGGATAAAGGACAC...CAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACCCAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR TCA 90 bp ATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGATTTCTCTATAGGACAAGCAAGTaGCAACCTGGTCACAAAGTT +
Preference number: 2 (lower is better)
Translates to: IPYTLLITLLFTFILGFLYRTSK*QPGHKV
Trigger: AACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATA...GAGAAATCCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR TCA 90 bp AAGCTGGGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGTATAGGACAAGCAAGTaGCAACCTGGTCACAAAGTT +
Preference number: 2 (lower is better)
Translates to: KLGNSKYCLGHSDTETLLYRTSK*QPGHKV
Trigger: AACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATA...CAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACCCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR GCA 90 bp CCTATGAATTTCTGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTTCCTGACATTCTTTaGATTCGAAGGACTTCTTCC +
Preference number: 2 (lower is better)
Translates to: PMNFCSSSKGRVNNNHSNFPDIL*IRRTSS
Trigger: GGAAGAAGTCCTTCGAATGCAAAGAATGTCAGGAAA...ATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCAGAAATTCATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR CCA 90 bp CCTATGAATTTCTGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATGTAAGATTTCTGCTCTaGCCAAAGACTGTCCTTAAT +
Preference number: 2 (lower is better)
Translates to: PMNFCSSSKGRVNNNHSNVRFLL*PKTVLN
Trigger: ATTAAGGACAGTCTTTGGCCAGAGCAGAAATCTTAC...ATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCAGAAATTCATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR GCA 90 bp AAACTGGAAAGCTGGGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAATTTCCTGACATTCTTTaGATTCGAAGGACTTCTTCC +
Preference number: 2 (lower is better)
Translates to: KLESWVILNIVWDTVIQKFPDIL*IRRTSS
Trigger: GGAAGAAGTCCTTCGAATGCAAAGAATGTCAGGAAA...TTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACCCAGCTTTCCAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR CCA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTTTCATAGCAGGAAAATaGAGGAAATACATGTCCATA +
Preference number: 2 (lower is better)
Translates to: KQPRHFLLEHMFHASISAFIAGK*RKYMSI
Trigger: TATGGACATGTATTTCCTCCATTTTCCTGCTATGAA...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR CCA 90 bp CATTGTGAGATGGCTTGTTTAAAGAAACTATTAATTCCCTACACTCTTCTGATCAAGCAAGTGACAACCTaGTCACAAAGTTTTCTCACA +
Preference number: 2 (lower is better)
Translates to: HCEMACLKKLLIPYTLLIKQVTT*SQSFLT
Trigger: TGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTT...GATCAGAAGAGTGTAGGGAATTAATAGTTTCTTTAAACAAGCCATCTCACAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR CCA 90 bp ATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGATTTCTCTTCATAGCAGGAAAATaGAGGAAATACATGTCCATA +
Preference number: 2 (lower is better)
Translates to: IPYTLLITLLFTFILGFLFIAGK*RKYMSI
Trigger: TATGGACATGTATTTCCTCCATTTTCCTGCTATGAA...GAGAAATCCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR GCA 72 bp GGCCTTAGGTACAAGTACAGCCACAGCTACAATACATaGAGCCTTCCAGAGAGAGGATGCAGGAGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: GLRYKYSHSYNT*SLPERGCRRVG
Trigger: CCCCACCCTCCTGCATCCTCTCTCTGGAAGGCTGCATGTATTGTAGCTGTGGCTGTACTTGTACCTAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR GCA 72 bp AACCTAGGGTGTCCTTTATCCCATGGAAAACACTCCTaGTTTGGGACAAACTGGGGCCTAGGTCCTCAGGCC +
Preference number: 3 (lower is better)
Translates to: NLGCPLSHGKHS*FGTNWGLGPQA
Trigger: GGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTTCCATGGGATAAAGGACACCCTAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR CCA 72 bp AGGGTGTCCTTTATCCCATGGAAAACACTCCTGCTTTaGGACAAACTGGGGCCTAGGTCCTCAGGCCTGGAA +
Preference number: 3 (lower is better)
Translates to: RVSFIPWKTLLL*DKLGPRSSGLE
Trigger: TTCCAGGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTTCCATGGGATAAAGGACACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR CCA 72 bp TGCTTTGGGACAAACTGGGGCCTAGGTCCTCAGGCCTaGAAAGAACCCTTTGATGACAGCCAATATGTTTCT +
Preference number: 3 (lower is better)
Translates to: CFGTNWGLGPQA*KEPFDDSQYVS
Trigger: AGAAACATATTGGCTGTCATCAAAGGGTTCTTTCCAGGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR CCA 72 bp CTTCTATCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTaGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGT +
Preference number: 3 (lower is better)
Translates to: LLSRLLVAPCVP*LEDVLPVSSHR
Trigger: ACGATGTGAAGACACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGATAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR CAA 90 bp ATAACCACAGCAATTTCAAGACACACAGGCTTCCATTGTGAGATGGCTTGTTTATGTAATCGCAGCACTTaGGGAGGCAGAGGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: ITTAISRHTGFHCEMACLCNRST*GGRGGW
Trigger: CCACCCGCCTCTGCCTCCCAAAGTGCTGCGATTACA...TAAACAAGCCATCTCACAATGGAAGCCTGTGTGTCTTGAAATTGCTGTGGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
3UTR-3UTR CAA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTTGTAATCGCAGCACTTaGGGAGGCAGAGGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: KQPRHFLLEHMFHASISACNRST*GGRGGW
Trigger: CCACCCGCCTCTGCCTCCCAAAGTGCTGCGATTACA...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
3UTR GCA 72 bp TGTGTTTTTCCTATATTAGACAGTAAGTTCCTTCCCTaGTCAAGGGCAGGACCCATAGCCCAGCCATCCACT +
Preference number: 3 (lower is better)
Translates to: CVFPILDSKFLP*SRAGPIAQPST
Trigger: AGTGGATGGCTGGGCTATGGGTCCTGCCCTTGAGCAGGGAAGGAACTTACTGTCTAATATAGGAAAAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
3UTR TCA 72 bp CCCCCTGGTATGAATCCTTCTGCAATGAGTGAGAACTaGGTGGTGACTGAAGGGATCCTTACATTCACTGTA +
Preference number: 3 (lower is better)
Translates to: PPGMNPSAMSEN*VVTEGILTFTV
Trigger: TACAGTGAATGTAAGGATCCCTTCAGTCACCACTCAGTTCTCACTCATTGCAGAAGGATTCATACCAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR TCA 72 bp AGTATGACCACAACAGTGAGTGGCCATGGAGCTAAATaGCAGGTGTCTCATGAGATTCTTGCCTATCACAGC +
Preference number: 3 (lower is better)
Translates to: SMTTTVSGHGAK*QVSHEILAYHS
Trigger: GCTGTGATAGGCAAGAATCTCATGAGACACCTGTCATTTAGCTCCATGGCCACTCACTGTTGTGGTCATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
3UTR TCA 72 bp CATTTCAAACATTTCCACATGTGCATGAAGTTAAAGTaGACTCTGACATTCCCCTCTACCCCATCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: HFKHFHMCMKLK*TLTFPSTPSLP
Trigger: GGGAAGGGATGGGGTAGAGGGGAATGTCAGAGTTCACTTTAACTTCATGCACATGTGGAAATGTTTGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344222.5
3UTR-3UTR CAA 90 bp GTACCAAACACTTCAGTGAAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAAACCAGTGGGTAAAGGCCTaGCTGTATTCATTGCAGCAA +
Preference number: 3 (lower is better)
Translates to: VPNTSVKTVWKELEAKKNQWVKA*LYSLQQ
Trigger: TTGCTGCAATGAATACAGCAAGGCCTTTACCCACTG...GTTTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR CAA 90 bp TCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACAGGCTTCAGTGGGTAAAGGCCTaGCTGTATTCATTGCAGCAA +
Preference number: 3 (lower is better)
Translates to: SSKGRVNNNHSNFKTHRLQWVKA*LYSLQQ
Trigger: TTGCTGCAATGAATACAGCAAGGCCTTTACCCACTG...AAGCCTGTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR CAA 90 bp ATGGTCATAACTAGTCCCACCCCCACAATCATTTCTCACAGATTAAGCAGCATAATGAGTTCTCTGATGTaGATGGAATGCCTTCCACAT +
Preference number: 3 (lower is better)
Translates to: MVITSPTPTIISHRLSSIMSSLM*MECLPH
Trigger: ATGTGGAAGGCATTCCATCAACATCAGAGAACTCAT...TATGCTGCTTAATCTGTGAGAAATGATTGTGGGGGTGGGACTAGTTATGACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344222.5
3UTR-3UTR CAA 90 bp ATAACCACAGCAATTTCAAGACACACAGGCTTCCATTGTGAGATGGCTTGTTTAATTTCTAATTCGTCTTaGCATGACCGACTTGCCGAG +
Preference number: 3 (lower is better)
Translates to: ITTAISRHTGFHCEMACLISNSS*HDRLAE
Trigger: CTCGGCAAGTCGGTCATGCAAAGACGAATTAGAAAT...TAAACAAGCCATCTCACAATGGAAGCCTGTGTGTCTTGAAATTGCTGTGGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344222.5
3UTR-3UTR CAA 90 bp AGCAGCAAGTTCATAGTAGATCCTTGTACCAAACACTTCAGTGAAGACTGTATGATGAGTTCTCTGATGTaGATGGAATGCCTTCCACAT +
Preference number: 3 (lower is better)
Translates to: SSKFIVDPCTKHFSEDCMMSSLM*MECLPH
Trigger: ATGTGGAAGGCATTCCATCAACATCAGAGAACTCAT...CATACAGTCTTCACTGAAGTGTTTGGTACAAGGATCTACTATGAACTTGCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR CAA 90 bp TCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACAGGCTTCCTGGAAAGAACCCTTaGATGACAGCCAATATGTTT +
Preference number: 3 (lower is better)
Translates to: SSKGRVNNNHSNFKTHRLPGKNP*MTANMF
Trigger: AAACATATTGGCTGTCATCAAAGGGTTCTTTCCAGG...AAGCCTGTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR TCA 72 bp CAAGTTCATAGTAGATCCTTGTACCAAACACTTCAGTaGAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAA +
Preference number: 3 (lower is better)
Translates to: QVHSRSLYQTLQ*RLYGKSWKLRK
Trigger: TTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTACAAGGATCTACTATGAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
3UTR-3UTR CAA 90 bp ACTATTAATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGATGAGTTCTCTGATGTaGATGGAATGCCTTCCACAT +
Preference number: 3 (lower is better)
Translates to: TINSLHSSDHSVVHIHFRMSSLM*MECLPH
Trigger: ATGTGGAAGGCATTCCATCAACATCAGAGAACTCAT...CCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAATTAATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR-3UTR CAA 90 bp ACTATTAATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGCCTGGAAAGAACCCTTaGATGACAGCCAATATGTTT +
Preference number: 3 (lower is better)
Translates to: TINSLHSSDHSVVHIHFRPGKNP*MTANMF
Trigger: AAACATATTGGCTGTCATCAAAGGGTTCTTTCCAGG...CCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAATTAATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR TCA 90 bp AAAACACTCCTGCTTTGGGACAAACTGGGGCCTAGGTCCTCAGGCCTGGAAAGAACAACGGTGCGGAGGTaGGCCCCAGTCGCCCTACCA +
Preference number: 4 (lower is better)
Translates to: KTLLLWDKLGPRSSGLERTTVRR*APVALP
Trigger: TGGTAGGGCGACTGGGGCTCACCTCCGCACCGTTGT...TCTTTCCAGGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376230.7
ENST00000447310.5
CDS-3UTR GCA 90 bp CTTGAACCCAGGGCCTTAGGTACAAGTACAGCCACAGCTACAATACATGCAGCCCGGGTCCTACAACGGTaGGGAGGTGAGCCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: LEPRALGTSTATATIHAARVLQR*GGEPQS
Trigger: CGACTGGGGCTCACCTCCGCACCGTTGTAGGACCCG...GGCTGCATGTATTGTAGCTGTGGCTGTACTTGTACCTAAGGCCCTGGGTTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp TTTCCTATATTAGACAGTAAGTTCCTTCCCTGCTCAAGGGCAGGACCCATAGCCCCGCCATCCGACCGTTaGCAGGACGAGGCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: FPILDSKFLPCSRAGPIAPPSDR*QDEAAW
Trigger: CCACGCGGCCTCGTCCTGCCAACGGTCGGATGGCGG...GGCTATGGGTCCTGCCCTTGAGCAGGGAAGGAACTTACTGTCTAATATAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447310.5
CDS-3UTR CCA 90 bp TCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTGGCTTGAAGATGTTCTTCCTGTGTGCTTTGGGACAAACTaGGGCCTAGGTCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SRLLVAPCVPWLEDVLPVCFGTN*GLGPQA
Trigger: GGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCA...CACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTCAGGACGAGGCCGCGTaGGGCAGCTCCCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: KQPRHFLLEHMFHASISAQDEAA*GSSHGL
Trigger: GAGCCCGTGGGAGCTGCCCCACGCGGCCTCGTCCTG...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTCCGCCATCCGACCGTTaGCAGGACGAGGCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: KQPRHFLLEHMFHASISAPPSDR*QDEAAW
Trigger: CCACGCGGCCTCGTCCTGCCAACGGTCGGATGGCGG...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp CTTGAACCCAGGGCCTTAGGTACAAGTACAGCCACAGCTACAATACATGCAGCCGTATGGACCCTTTGGTaGTGCAGAAGGTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: LEPRALGTSTATATIHAAVWTLW*CRRCDL
Trigger: CAGGTCACACCTTCTGCAGCACCAAAGGGTCCATAC...GGCTGCATGTATTGTAGCTGTGGCTGTACTTGTACCTAAGGCCCTGGGTTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR GCA 90 bp TCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTGGCTTGAAGATGTTCTTCCTGTGAGTAAGTTCCTTCCCTaGTCAAGGGCAGGACCCATA +
Preference number: 4 (lower is better)
Translates to: SRLLVAPCVPWLEDVLPVSKFLP*SRAGPI
Trigger: TATGGGTCCTGCCCTTGAGCAGGGAAGGAACTTACT...CACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR CCA 90 bp AAAACACTCCTGCTTTGGGACAAACTGGGGCCTAGGTCCTCAGGCCTGGAAAGATGGCGGGTAAGTGGTTaGCTCTCTGGTATGAACTTG +
Preference number: 4 (lower is better)
Translates to: KTLLLWDKLGPRSSGLERWRVSG*LSGMNL
Trigger: CAAGTTCATACCAGAGAGCCAACCACTTACCCGCCA...TCTTTCCAGGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp AAAACACTCCTGCTTTGGGACAAACTGGGGCCTAGGTCCTCAGGCCTGGAAAGAAGACTGGCGGGTAAGTaGTTGGCTCTCTGGTATGAA +
Preference number: 4 (lower is better)
Translates to: KTLLLWDKLGPRSSGLERRLAGK*LALWYE
Trigger: TTCATACCAGAGAGCCAACCACTTACCCGCCAGTCT...TCTTTCCAGGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp TCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTGGCTTGAAGATGTTCTTCCTGTGCTAGGTCCTCAGGCCTaGAAAGAACCCTTTGATGAC +
Preference number: 4 (lower is better)
Translates to: SRLLVAPCVPWLEDVLPVLGPQA*KEPFDD
Trigger: GTCATCAAAGGGTTCTTTCCAGGCCTGAGGACCTAG...CACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp ACTGAAGGTTTTCATAAGTTCATAGAGAAAATCCCAAGGTGGGTCAAATTCCAGCCGCCATCCGACCGTTaGCAGGACGAGGCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: TEGFHKFIEKIPRWVKFQPPSDR*QDEAAW
Trigger: CCACGCGGCCTCGTCCTGCCAACGGTCGGATGGCGG...CTGGAATTTGACCCACCTTGGGATTTTCTCTATGAACTTATGAAAACCTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp AAAACACTCCTGCTTTGGGACAAACTGGGGCCTAGGTCCTCAGGCCTGGAAAGATTTCCCTGGTTGCTGTaGGTCACATTCATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: KTLLLWDKLGPRSSGLERFPWLL*VTFMEN
Trigger: GTTCTCCATGAATGTGACTCACAGCAACCAGGGAAA...TCTTTCCAGGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR TCA 90 bp TCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTGGCTTGAAGATGTTCTTCCTGTGTTTCCCTGGTTGCTGTaGGTCACATTCATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SRLLVAPCVPWLEDVLPVFPWLL*VTFMEN
Trigger: GTTCTCCATGAATGTGACTCACAGCAACCAGGGAAA...CACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp AAAACACTCCTGCTTTGGGACAAACTGGGGCCTAGGTCCTCAGGCCTGGAAAGAGTGAGAACTGAGTGGTaGCTGAAGGGATCCTTACAT +
Preference number: 4 (lower is better)
Translates to: KTLLLWDKLGPRSSGLERVRTEW*LKGSLH
Trigger: ATGTAAGGATCCCTTCAGTCACCACTCAGTTCTCAC...TCTTTCCAGGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR TCA 90 bp CTTGAACCCAGGGCCTTAGGTACAAGTACAGCCACAGCTACAATACATGCAGCCGTTGGCTCTCTGGTATaGACTTGTGCTCTGTCACCT +
Preference number: 4 (lower is better)
Translates to: LEPRALGTSTATATIHAAVGSLV*TCALSP
Trigger: AGGTGACAGAGCACAAGTTCATACCAGAGAGCCAAC...GGCTGCATGTATTGTAGCTGTGGCTGTACTTGTACCTAAGGCCCTGGGTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376230.7
ENST00000447310.5
CDS-3UTR GCA 90 bp CTTGAACCCAGGGCCTTAGGTACAAGTACAGCCACAGCTACAATACATGCAGCCCATGGAAAACACTCCTaGTTTGGGACAAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LEPRALGTSTATATIHAAHGKHS*FGTNWG
Trigger: GCCCCAGTTTGTCCCAAAGCAGGAGTGTTTTCCATG...GGCTGCATGTATTGTAGCTGTGGCTGTACTTGTACCTAAGGCCCTGGGTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR GCA 90 bp TCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACAGGCTTCGGGTCCTACAACGGTaGGGAGGTGAGCCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: SSKGRVNNNHSNFKTHRLRVLQR*GGEPQS
Trigger: CGACTGGGGCTCACCTCCGCACCGTTGTAGGACCCG...AAGCCTGTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATACAGGACGAGGCCGCGTaGGGCAGCTCCCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIQDEAA*GSSHGL
Trigger: GAGCCCGTGGGAGCTGCCCCACGCGGCCTCGTCCTG...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp TTTTGGAGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAACAGGACGAGGCCGCGTaGGGCAGCTCCCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: FWRHKHLTLPYEFLQFFKQDEAA*GSSHGL
Trigger: GAGCCCGTGGGAGCTGCCCCACGCGGCCTCGTCCTG...TTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCTCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGTGGATGACAGAGTGCTaGATGAGGTACGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLWMTEC*MRYVLR
Trigger: CCGGAGCACGTACCTCATTCAGCACTCTGTCATCCA...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp GAGTTCTCTGATGTTGATGGAATGCCTTCCACATTTCCCCCTGGTATGAATCCTGGCGGGTGGACTACATaGGGTCAAGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: EFSDVDGMPSTFPPGMNPGGWTT*GQEFKT
Trigger: GGTCTTGAACTCTTGACCTCATGTAGTCCACCCGCC...AGGATTCATACCAGGGGGAAATGTGGAAGGCATTCCATCAACATCAGAGAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR GCA 90 bp GAGTTCTCTGATGTTGATGGAATGCCTTCCACATTTCCCCCTGGTATGAATCCTTGGACCCTTTGGTGCTaGAGAAGGTGTGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: EFSDVDGMPSTFPPGMNPWTLWC*RRCDLR
Trigger: ACGCAGGTCACACCTTCTGCAGCACCAAAGGGTCCA...AGGATTCATACCAGGGGGAAATGTGGAAGGCATTCCATCAACATCAGAGAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp ACTGAAGGTTTTCATAAGTTCATAGAGAAAATCCCAAGGTGGGTCAAATTCCAGCGGGTCCTACAACGGTaGGGAGGTGAGCCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: TEGFHKFIEKIPRWVKFQRVLQR*GGEPQS
Trigger: CGACTGGGGCTCACCTCCGCACCGTTGTAGGACCCG...CTGGAATTTGACCCACCTTGGGATTTTCTCTATGAACTTATGAAAACCTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp TCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTGGCTTGAAGATGTTCTTCCTGTGGTGTCCTTTATCCCATaGAAAACACTCCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SRLLVAPCVPWLEDVLPVVSFIP*KTLLLW
Trigger: CCAAAGCAGGAGTGTTTTCCATGGGATAAAGGACAC...CACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp AAAACACTCCTGCTTTGGGACAAACTGGGGCCTAGGTCCTCAGGCCTGGAAAGAGTGTCCTTTATCCCATaGAAAACACTCCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KTLLLWDKLGPRSSGLERVSFIP*KTLLLW
Trigger: CCAAAGCAGGAGTGTTTTCCATGGGATAAAGGACAC...TCTTTCCAGGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR TCA 90 bp GAGTTCTCTGATGTTGATGGAATGCCTTCCACATTTCCCCCTGGTATGAATCCTGGGTTTGTCCCTGCATaGATCAAGGCGTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: EFSDVDGMPSTFPPGMNPGFVPA*IKASFP
Trigger: AGGGAAAGACGCCTTGATTCATGCAGGGACAAACCC...AGGATTCATACCAGGGGGAAATGTGGAAGGCATTCCATCAACATCAGAGAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGGGGTTTGTCCCTGCATaGATCAAGGCGTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLGFVPA*IKASFP
Trigger: AGGGAAAGACGCCTTGATTCATGCAGGGACAAACCC...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp AGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAAGGGCAGTTCCCAGCACAGTTCTaGGAGCGCGGACCAACACGC +
Preference number: 4 (lower is better)
Translates to: RHKHLTLPYEFLQFFKGQFPAQF*ERGPTR
Trigger: GCGTGTTGGTCCGCGCTCTCAGAACTGTGCTGGGAA...CTGCCCTTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTTTCCCAGCACAGTTCTaGGAGCGCGGACCAACACGC +
Preference number: 4 (lower is better)
Translates to: KQPRHFLLEHMFHASISAFPAQF*ERGPTR
Trigger: GCGTGTTGGTCCGCGCTCTCAGAACTGTGCTGGGAA...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp TTTATAGGACAAGCAAGTGACAACCTGGTCACAAAGTTTTCTCACATCAATAACACAACGGTGCGGAGGTaGGCCCCAGTCGCCCTACCA +
Preference number: 4 (lower is better)
Translates to: FIGQASDNLVTKFSHINNTTVRR*APVALP
Trigger: TGGTAGGGCGACTGGGGCTCACCTCCGCACCGTTGT...GTTATTGATGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp TCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTGGCTTGAAGATGTTCTTCCTGTGGTCACTTTACCTTTCTaGATTTCCAAAAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SRLLVAPCVPWLEDVLPVVTLPF*ISKSPS
Trigger: GGAAGGGCTTTTGGAAATGCAGAAAGGTAAAGTGAC...CACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp GAGTTCTCTGATGTTGATGGAATGCCTTCCACATTTCCCCCTGGTATGAATCCTTGGATTGGATGGTGCTaGATGAGGTACGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: EFSDVDGMPSTFPPGMNPWIGWC*MRYDLR
Trigger: ACGCAGGTCGTACCTCATGCAGCACCATCCAATCCA...AGGATTCATACCAGGGGGAAATGTGGAAGGCATTCCATCAACATCAGAGAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGGTATGGACCCTTTGGTaGTGCAGAAGGTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLVWTLW*CRRCDL
Trigger: CAGGTCACACCTTCTGCAGCACCAAAGGGTCCATAC...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp TTTCCTATATTAGACAGTAAGTTCCTTCCCTGCTCAAGGGCAGGACCCATAGCCCATGGAAAACACTCCTaGTTTGGGACAAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: FPILDSKFLPCSRAGPIAHGKHS*FGTNWG
Trigger: GCCCCAGTTTGTCCCAAAGCAGGAGTGTTTTCCATG...GGCTATGGGTCCTGCCCTTGAGCAGGGAAGGAACTTACTGTCTAATATAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR GCA 90 bp ATGGTCATAACTAGTCCCACCCCCACAATCATTTCTCACAGATTAAGCAGCATATCGGGAGGCAGAAGTTaGAGTGAGCTGAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: MVITSPTPTIISHRLSSISGGRS*SELRWR
Trigger: GCGCCATCTCAGCTCACTGCAACTTCTGCCTCCCGA...TATGCTGCTTAATCTGTGAGAAATGATTGTGGGGGTGGGACTAGTTATGACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344222.5
CDS-3UTR GCA 90 bp AAAACACTCCTGCTTTGGGACAAACTGGGGCCTAGGTCCTCAGGCCTGGAAAGATTTCTAATTCGTCTTTaGATGACCGACTTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: KTLLLWDKLGPRSSGLERFLIRL*MTDLPS
Trigger: ACTCGGCAAGTCGGTCATGCAAAGACGAATTAGAAA...TCTTTCCAGGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344222.5
CDS-3UTR CCA 90 bp AAAACACTCCTGCTTTGGGACAAACTGGGGCCTAGGTCCTCAGGCCTGGAAAGATCAGTGAAGACTGTATaGAAAGAGCTGGAAGCTAAG +
Preference number: 4 (lower is better)
Translates to: KTLLLWDKLGPRSSGLERSVKTV*KELEAK
Trigger: CTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGA...TCTTTCCAGGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR TCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGGCAATGAGTGAGAACTaGGTGGTGACTGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLAMSEN*VVTEGI
Trigger: GATCCCTTCAGTCACCACTCAGTTCTCACTCATTGC...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp ACTATTAATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGACAACGGTGCGGAGGTaGGCCCCAGTCGCCCTACCA +
Preference number: 4 (lower is better)
Translates to: TINSLHSSDHSVVHIHFRTTVRR*APVALP
Trigger: TGGTAGGGCGACTGGGGCTCACCTCCGCACCGTTGT...CCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAATTAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp AGCAGCAAGTTCATAGTAGATCCTTGTACCAAACACTTCAGTGAAGACTGTATGCACCAACATCTGCGCTaGGTCCTTCGTCTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: SSKFIVDPCTKHFSEDCMHQHLR*VLRLRH
Trigger: ATGGCGGAGACGAAGGACGCAGCGCAGATGTTGGTG...CATACAGTCTTCACTGAAGTGTTTGGTACAAGGATCTACTATGAACTTGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGCTCACTTTCCCAAGATaGGTCTCCTTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLLTFPR*VSLWRS
Trigger: AGACCTCCACAAGGAGACCCATCTTGGGAAAGTGAG...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCTGCTTTGGGACAAACTaGGGCCTAGGTCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFCFGTN*GLGPQA
Trigger: GGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCA...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp TGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACCAGGTGGACCAACTCTaGTTTGGGAACCCGATGCCC +
Preference number: 4 (lower is better)
Translates to: CSSSKGRVNNNHSNFKTHQVDQL*FGNPMP
Trigger: GGGCATCGGGTTCCCAAACCAGAGTTGGTCCACCTG...GTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp GTACCAAACACTTCAGTGAAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAAACCAGGTGGACCAACTCTaGTTTGGGAACCCGATGCCC +
Preference number: 4 (lower is better)
Translates to: VPNTSVKTVWKELEAKKNQVDQL*FGNPMP
Trigger: GGGCATCGGGTTCCCAAACCAGAGTTGGTCCACCTG...GTTTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376230.7
ENST00000447310.5
CDS-3UTR TCA 90 bp AGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAAGGGCAGTGGATGACAGAGTGCTaGATGAGGTACGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RHKHLTLPYEFLQFFKGQWMTEC*MRYVLR
Trigger: CCGGAGCACGTACCTCATTCAGCACTCTGTCATCCA...CTGCCCTTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCTGGATGACAGAGTGCTaGATGAGGTACGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFWMTEC*MRYVLR
Trigger: CCGGAGCACGTACCTCATTCAGCACTCTGTCATCCA...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR TCA 90 bp GTACCAAACACTTCAGTGAAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAAACGGCGGGTGGACTACATaGGGTCAAGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: VPNTSVKTVWKELEAKKNGGWTT*GQEFKT
Trigger: GGTCTTGAACTCTTGACCTCATGTAGTCCACCCGCC...GTTTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR TCA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCATTCCCAGCACAGTTCTaGGAGCGCGGACCAACACGC +
Preference number: 4 (lower is better)
Translates to: PIMNDKITVGKGLAVFIAFPAQF*ERGPTR
Trigger: GCGTGTTGGTCCGCGCTCTCAGAACTGTGCTGGGAA...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp AGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAAGGGCAGTGGACCCTTTGGTGCTaGAGAAGGTGTGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: RHKHLTLPYEFLQFFKGQWTLWC*RRCDLR
Trigger: ACGCAGGTCACACCTTCTGCAGCACCAAAGGGTCCA...CTGCCCTTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp GAGTTCTCTGATGTTGATGGAATGCCTTCCACATTTCCCCCTGGTATGAATCCTCTGATGTTGATGGAATaGCTTCCACATTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: EFSDVDGMPSTFPPGMNPLMLME*LPHFPL
Trigger: CAGGGGGAAATGTGGAAGGCATTCCATCAACATCAG...AGGATTCATACCAGGGGGAAATGTGGAAGGCATTCCATCAACATCAGAGAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp CCTATGAATTTCTGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATCACCAACATCTGCGCTaGGTCCTTCGTCTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: PMNFCSSSKGRVNNNHSNHQHLR*VLRLRH
Trigger: ATGGCGGAGACGAAGGACGCAGCGCAGATGTTGGTG...ATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCAGAAATTCATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTACTATCCACAGCTCCTaGCCATGCTCTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KQPRHFLLEHMFHASISATIHSS*PCSSRW
Trigger: CCACCTGCTAGAGCATGGGCAGGAGCTGTGGATAGT...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp TGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACACTATCCACAGCTCCTaGCCATGCTCTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CSSSKGRVNNNHSNFKTHTIHSS*PCSSRW
Trigger: CCACCTGCTAGAGCATGGGCAGGAGCTGTGGATAGT...GTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp GAGTTCTCTGATGTTGATGGAATGCCTTCCACATTTCCCCCTGGTATGAATCCTTCTGGTATGAACTTGTaGTCTGTCACCTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: EFSDVDGMPSTFPPGMNPSGMNL*SVTCTG
Trigger: ACCTGTGCAGGTGACAGAGCACAAGTTCATACCAGA...AGGATTCATACCAGGGGGAAATGTGGAAGGCATTCCATCAACATCAGAGAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp GTACCAAACACTTCAGTGAAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAAACAGATGGGTCTCCTTGTaGAGGTCTGTCTCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: VPNTSVKTVWKELEAKKNRWVSL*RSVSGV
Trigger: GACACCGGAGACAGACCTCCACAAGGAGACCCATCT...GTTTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGGAGAAAATCCCAAGGTaGGTCAAATTCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLEKIPR*VKFQHG
Trigger: GCCATGCTGGAATTTGACCCACCTTGGGATTTTCTC...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp ACTGAAGGTTTTCATAAGTTCATAGAGAAAATCCCAAGGTGGGTCAAATTCCAGTGCTTTGGGACAAACTaGGGCCTAGGTCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TEGFHKFIEKIPRWVKFQCFGTN*GLGPQA
Trigger: GGCCTGAGGACCTAGGCCCCAGTTTGTCCCAAAGCA...CTGGAATTTGACCCACCTTGGGATTTTCTCTATGAACTTATGAAAACCTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR TCA 90 bp TGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACGGGTTTGTCCCTGCATaGATCAAGGCGTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: CSSSKGRVNNNHSNFKTHGFVPA*IKASFP
Trigger: AGGGAAAGACGCCTTGATTCATGCAGGGACAAACCC...GTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp ACTGAAGGTTTTCATAAGTTCATAGAGAAAATCCCAAGGTGGGTCAAATTCCAGTGGATGACAGAGTGCTaGATGAGGTACGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: TEGFHKFIEKIPRWVKFQWMTEC*MRYVLR
Trigger: CCGGAGCACGTACCTCATTCAGCACTCTGTCATCCA...CTGGAATTTGACCCACCTTGGGATTTTCTCTATGAACTTATGAAAACCTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp CACAGTGATACAGAAACACTTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTAGTTGGCTCTCTGGTATaGACTTGTGCTCTGTCACCT +
Preference number: 4 (lower is better)
Translates to: HSDTETLLSILWERKGNVVGSLV*TCALSP
Trigger: AGGTGACAGAGCACAAGTTCATACCAGAGAGCCAAC...TACATTGCCCTTCCTCTCCCATAAGATGGACAAAAGTGTTTCTGTATCACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp CTTGAACCCAGGGCCTTAGGTACAAGTACAGCCACAGCTACAATACATGCAGCCCATAATCAGAGGATTTaGATCAAGGATGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LEPRALGTSTATATIHAAHNQRI*IKDESF
Trigger: GAAGCTTTCATCCTTGATTCAAATCCTCTGATTATG...GGCTGCATGTATTGTAGCTGTGGCTGTACTTGTACCTAAGGCCCTGGGTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376230.7
ENST00000447310.5
CDS-3UTR GCA 90 bp GTACCAAACACTTCAGTGAAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAAACTGTAATGCCCTGGAGTaGAGACCATCATCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VPNTSVKTVWKELEAKKNCNALE*RPSSVP
Trigger: GGGGACAGATGATGGTCTGCACTCCAGGGCATTACA...GTTTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR GCA 90 bp ATAACCACAGCAATTTCAAGACACACAGGCTTCCATTGTGAGATGGCTTGTTTATGTAATGCCCTGGAGTaGAGACCATCATCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: ITTAISRHTGFHCEMACLCNALE*RPSSVP
Trigger: GGGGACAGATGATGGTCTGCACTCCAGGGCATTACA...TAAACAAGCCATCTCACAATGGAAGCCTGTGTGTCTTGAAATTGCTGTGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCTGGATTGGATGGTGCTaGATGAGGTACGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFWIGWC*MRYDLR
Trigger: ACGCAGGTCGTACCTCATGCAGCACCATCCAATCCA...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR GCA 90 bp TCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACAGGCTTGTGTGGATTGGATGGTaGTGCATGAGGTACGACCTG +
Preference number: 4 (lower is better)
Translates to: SSKGRVNNNHSNFKTHRLVWIGW*CMRYDL
Trigger: CAGGTCGTACCTCATGCAGCACCATCCAATCCACAC...AAGCCTGTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp TCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACAGGCTTGTATGGACCCTTTGGTaGTGCAGAAGGTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: SSKGRVNNNHSNFKTHRLVWTLW*CRRCDL
Trigger: CAGGTCACACCTTCTGCAGCACCAAAGGGTCCATAC...AAGCCTGTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp ATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGATTTCTCTCGGGAGGCAGAAGTTaGAGTGAGCTGAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: IPYTLLITLLFTFILGFLSGGRS*SELRWR
Trigger: GCGCCATCTCAGCTCACTGCAACTTCTGCCTCCCGA...GAGAAATCCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR CCA 90 bp GAGTTCTCTGATGTTGATGGAATGCCTTCCACATTTCCCCCTGGTATGAATCCTAAGTGGTTGGCTCTCTaGTATGAACTTGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: EFSDVDGMPSTFPPGMNPKWLAL*YELVLC
Trigger: ACAGAGCACAAGTTCATACCAGAGAGCCAACCACTT...AGGATTCATACCAGGGGGAAATGTGGAAGGCATTCCATCAACATCAGAGAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp CACAGTGATACAGAAACACTTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTAAGACTGGCGGGTAAGTaGTTGGCTCTCTGGTATGAA +
Preference number: 4 (lower is better)
Translates to: HSDTETLLSILWERKGNVRLAGK*LALWYE
Trigger: TTCATACCAGAGAGCCAACCACTTACCCGCCAGTCT...TACATTGCCCTTCCTCTCCCATAAGATGGACAAAAGTGTTTCTGTATCACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp CACAGTGATACAGAAACACTTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTAAAAACACTCCTGCTTTaGGACAAACTGGGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: HSDTETLLSILWERKGNVKTLLL*DKLGPR
Trigger: CCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTT...TACATTGCCCTTCCTCTCCCATAAGATGGACAAAAGTGTTTCTGTATCACTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp GGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGTCCATCCAGGTGGACCAACTCTaGTTTGGGAACCCGATGCCC +
Preference number: 4 (lower is better)
Translates to: GNSKYCLGHSDTETLLSIQVDQL*FGNPMP
Trigger: GGGCATCGGGTTCCCAAACCAGAGTTGGTCCACCTG...GATGGACAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp GTACCAAACACTTCAGTGAAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAAACGTGCCGAATGAGAGTTaGGCTCTGGCTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VPNTSVKTVWKELEAKKNVPNES*ALAKGF
Trigger: AAAGCCTTTAGCCAGAGCTCAACTCTCATTCGGCAC...GTTTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR TCA 90 bp AGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAAGGGCAGGTGCCGAATGAGAGTTaGGCTCTGGCTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: RHKHLTLPYEFLQFFKGQVPNES*ALAKGF
Trigger: AAAGCCTTTAGCCAGAGCTCAACTCTCATTCGGCAC...CTGCCCTTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCGTGCCGAATGAGAGTTaGGCTCTGGCTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFVPNES*ALAKGF
Trigger: AAAGCCTTTAGCCAGAGCTCAACTCTCATTCGGCAC...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR TCA 90 bp CACAGTGATACAGAAACACTTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTAGTGAGAACTGAGTGGTaGCTGAAGGGATCCTTACAT +
Preference number: 4 (lower is better)
Translates to: HSDTETLLSILWERKGNVVRTEW*LKGSLH
Trigger: ATGTAAGGATCCCTTCAGTCACCACTCAGTTCTCAC...TACATTGCCCTTCCTCTCCCATAAGATGGACAAAAGTGTTTCTGTATCACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp GAGTTCTCTGATGTTGATGGAATGCCTTCCACATTTCCCCCTGGTATGAATCCTTATAGGACAAGCAAGTaGCAACCTGGTCACAAAGTT +
Preference number: 4 (lower is better)
Translates to: EFSDVDGMPSTFPPGMNPYRTSK*QPGHKV
Trigger: AACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATA...AGGATTCATACCAGGGGGAAATGTGGAAGGCATTCCATCAACATCAGAGAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp GAGTTCTCTGATGTTGATGGAATGCCTTCCACATTTCCCCCTGGTATGAATCCTCTCTGTGACATTTACTaGTTGAAGTGCACCAACTGT +
Preference number: 4 (lower is better)
Translates to: EFSDVDGMPSTFPPGMNPLCDIY*LKCTNC
Trigger: ACAGTTGGTGCACTTCAATCAGTAAATGTCACAGAG...AGGATTCATACCAGGGGGAAATGTGGAAGGCATTCCATCAACATCAGAGAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344222.5
CDS-3UTR TCA 90 bp ACTAGATCACCATATGACCTAGCCATTCAGCTGCAAGGTACATTTCTCATGTATTGCACAGGTAGCATGTaGGAGGCCTCTCTTCACTAT +
Preference number: 4 (lower is better)
Translates to: TRSPYDLAIQLQGTFLMYCTGSM*EASLHY
Trigger: ATAGTGAAGAGAGGCCTCTCACATGCTACCTGTGCA...ATACATGAGAAATGTACCTTGCAGCTGAATGGCTAGGTCATATGGTGATCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp TGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACTGCACAGGTAGCATGTaGGAGGCCTCTCTTCACTAT +
Preference number: 4 (lower is better)
Translates to: CSSSKGRVNNNHSNFKTHCTGSM*EASLHY
Trigger: ATAGTGAAGAGAGGCCTCTCACATGCTACCTGTGCA...GTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGGTCACTTTACCTTTCTaGATTTCCAAAAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLVTLPF*ISKSPS
Trigger: GGAAGGGCTTTTGGAAATGCAGAAAGGTAAAGTGAC...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp GAGTTCTCTGATGTTGATGGAATGCCTTCCACATTTCCCCCTGGTATGAATCCTGTCACTTTACCTTTCTaGATTTCCAAAAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: EFSDVDGMPSTFPPGMNPVTLPF*ISKSPS
Trigger: GGAAGGGCTTTTGGAAATGCAGAAAGGTAAAGTGAC...AGGATTCATACCAGGGGGAAATGTGGAAGGCATTCCATCAACATCAGAGAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp ACTGAAGGTTTTCATAAGTTCATAGAGAAAATCCCAAGGTGGGTCAAATTCCAGTGGATTGGATGGTGCTaGATGAGGTACGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: TEGFHKFIEKIPRWVKFQWIGWC*MRYDLR
Trigger: ACGCAGGTCGTACCTCATGCAGCACCATCCAATCCA...CTGGAATTTGACCCACCTTGGGATTTTCTCTATGAACTTATGAAAACCTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp GGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGTCCATCTGGACCCTTTGGTGCTaGAGAAGGTGTGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: GNSKYCLGHSDTETLLSIWTLWC*RRCDLR
Trigger: ACGCAGGTCACACCTTCTGCAGCACCAAAGGGTCCA...GATGGACAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp TTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTATAACATAATTCCAGTTACATGGACCCTTTGGTGCTaGAGAAGGTGTGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: FCPSYGRGRAMYNIIPVTWTLWC*RRCDLR
Trigger: ACGCAGGTCACACCTTCTGCAGCACCAAAGGGTCCA...TGTAACTGGAATTATGTTATACATTGCCCTTCCTCTCCCATAAGATGGACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp ACTATTAATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGCACCAACATCTGCGCTaGGTCCTTCGTCTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: TINSLHSSDHSVVHIHFRHQHLR*VLRLRH
Trigger: ATGGCGGAGACGAAGGACGCAGCGCAGATGTTGGTG...CCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAATTAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp ATAACCACAGCAATTTCAAGACACACAGGCTTCCATTGTGAGATGGCTTGTTTAAGACTGGCGGGTAAGTaGTTGGCTCTCTGGTATGAA +
Preference number: 4 (lower is better)
Translates to: ITTAISRHTGFHCEMACLRLAGK*LALWYE
Trigger: TTCATACCAGAGAGCCAACCACTTACCCGCCAGTCT...TAAACAAGCCATCTCACAATGGAAGCCTGTGTGTCTTGAAATTGCTGTGGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTAGATGGGTCTCCTTGTaGAGGTCTGTCTCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: GPIMNDKITVGKGLAVFIRWVSL*RSVSGV
Trigger: GACACCGGAGACAGACCTCCACAAGGAGACCCATCT...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAAGATGGGTCTCCTTGTaGAGGTCTGTCTCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: PIMNDKITVGKGLAVFIARWVSL*RSVSGV
Trigger: GACACCGGAGACAGACCTCCACAAGGAGACCCATCT...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTCTCACTTTCCCAAGATaGGTCTCCTTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: KQPRHFLLEHMFHASISALTFPR*VSLWRS
Trigger: AGACCTCCACAAGGAGACCCATCTTGGGAAAGTGAG...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp ACTAGATCACCATATGACCTAGCCATTCAGCTGCAAGGTACATTTCTCATGTATCTCACTTTCCCAAGATaGGTCTCCTTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TRSPYDLAIQLQGTFLMYLTFPR*VSLWRS
Trigger: AGACCTCCACAAGGAGACCCATCTTGGGAAAGTGAG...ATACATGAGAAATGTACCTTGCAGCTGAATGGCTAGGTCATATGGTGATCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp GTACCAAACACTTCAGTGAAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAAACCATGTATGGACCCTTTaGTGCTGCAGAAGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: VPNTSVKTVWKELEAKKNHVWTL*CCRRCD
Trigger: GTCACACCTTCTGCAGCACCAAAGGGTCCATACATG...GTTTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCCATGTATGGACCCTTTaGTGCTGCAGAAGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFHVWTL*CCRRCD
Trigger: GTCACACCTTCTGCAGCACCAAAGGGTCCATACATG...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp TTTCCTATATTAGACAGTAAGTTCCTTCCCTGCTCAAGGGCAGGACCCATAGCCGTAAGATTTCTGCTCTaGCCAAAGACTGTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: FPILDSKFLPCSRAGPIAVRFLL*PKTVLN
Trigger: ATTAAGGACAGTCTTTGGCCAGAGCAGAAATCTTAC...GGCTATGGGTCCTGCCCTTGAGCAGGGAAGGAACTTACTGTCTAATATAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR CCA 90 bp TTTCCTATATTAGACAGTAAGTTCCTTCCCTGCTCAAGGGCAGGACCCATAGCCAAGCAAGTGACAACCTaGTCACAAAGTTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: FPILDSKFLPCSRAGPIAKQVTT*SQSFLT
Trigger: TGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTT...GGCTATGGGTCCTGCCCTTGAGCAGGGAAGGAACTTACTGTCTAATATAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR CCA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCCTAGGTCCTCAGGCCTaGAAAGAACCCTTTGATGAC +
Preference number: 4 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFLGPQA*KEPFDD
Trigger: GTCATCAAAGGGTTCTTTCCAGGCCTGAGGACCTAG...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp ACTAGATCACCATATGACCTAGCCATTCAGCTGCAAGGTACATTTCTCATGTATCTAGGTCCTCAGGCCTaGAAAGAACCCTTTGATGAC +
Preference number: 4 (lower is better)
Translates to: TRSPYDLAIQLQGTFLMYLGPQA*KEPFDD
Trigger: GTCATCAAAGGGTTCTTTCCAGGCCTGAGGACCTAG...ATACATGAGAAATGTACCTTGCAGCTGAATGGCTAGGTCATATGGTGATCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp GAGTTCTCTGATGTTGATGGAATGCCTTCCACATTTCCCCCTGGTATGAATCCTCTTCCAAATCACTTCTaGTGCTTTCCTTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: EFSDVDGMPSTFPPGMNPLPNHF*CFPSCF
Trigger: GAAGCAAGAAGGAAAGCACCAGAAGTGATTTGGAAG...AGGATTCATACCAGGGGGAAATGTGGAAGGCATTCCATCAACATCAGAGAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp TCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACAGGCTTTTTCCCTGGTTGCTGTaGGTCACATTCATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SSKGRVNNNHSNFKTHRLFPWLL*VTFMEN
Trigger: GTTCTCCATGAATGTGACTCACAGCAACCAGGGAAA...AAGCCTGTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp AAACTGGAAAGCTGGGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAAGGGTTTGTCCCTGCATaGATCAAGGCGTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: KLESWVILNIVWDTVIQKGFVPA*IKASFP
Trigger: AGGGAAAGACGCCTTGATTCATGCAGGGACAAACCC...TTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACCCAGCTTTCCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGGGTTTGTCCCTGCATaGATCAAGGCGTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GPIMNDKITVGKGLAVFIGFVPA*IKASFP
Trigger: AGGGAAAGACGCCTTGATTCATGCAGGGACAAACCC...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR TCA 90 bp ACTGAAGGTTTTCATAAGTTCATAGAGAAAATCCCAAGGTGGGTCAAATTCCAGGTGCCGAATGAGAGTTaGGCTCTGGCTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: TEGFHKFIEKIPRWVKFQVPNES*ALAKGF
Trigger: AAAGCCTTTAGCCAGAGCTCAACTCTCATTCGGCAC...CTGGAATTTGACCCACCTTGGGATTTTCTCTATGAACTTATGAAAACCTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp ACTAGATCACCATATGACCTAGCCATTCAGCTGCAAGGTACATTTCTCATGTATGAACTGAGTGGTGACTaGAGGGATCCTTACATTCAC +
Preference number: 4 (lower is better)
Translates to: TRSPYDLAIQLQGTFLMYELSGD*RDPYIH
Trigger: GTGAATGTAAGGATCCCTTCAGTCACCACTCAGTTC...ATACATGAGAAATGTACCTTGCAGCTGAATGGCTAGGTCATATGGTGATCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTGAACTGAGTGGTGACTaGAGGGATCCTTACATTCAC +
Preference number: 4 (lower is better)
Translates to: KQPRHFLLEHMFHASISAELSGD*RDPYIH
Trigger: GTGAATGTAAGGATCCCTTCAGTCACCACTCAGTTC...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp ATAACCACAGCAATTTCAAGACACACAGGCTTCCATTGTGAGATGGCTTGTTTAGTGAGAACTGAGTGGTaGCTGAAGGGATCCTTACAT +
Preference number: 4 (lower is better)
Translates to: ITTAISRHTGFHCEMACLVRTEW*LKGSLH
Trigger: ATGTAAGGATCCCTTCAGTCACCACTCAGTTCTCAC...TAAACAAGCCATCTCACAATGGAAGCCTGTGTGTCTTGAAATTGCTGTGGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp GTACCAAACACTTCAGTGAAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAAACGTGAGAACTGAGTGGTaGCTGAAGGGATCCTTACAT +
Preference number: 4 (lower is better)
Translates to: VPNTSVKTVWKELEAKKNVRTEW*LKGSLH
Trigger: ATGTAAGGATCCCTTCAGTCACCACTCAGTTCTCAC...GTTTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR TCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGGTGACATTTACTGATTaGAGTGCACCAACTGTGAAT +
Preference number: 4 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLVTFTD*SAPTVN
Trigger: ATTCACAGTTGGTGCACTTCAATCAGTAAATGTCAC...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344222.5
CDS-3UTR GCA 90 bp TTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTATAACATAATTCCAGTTACATGTAATGCCCTGGAGTaGAGACCATCATCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: FCPSYGRGRAMYNIIPVTCNALE*RPSSVP
Trigger: GGGGACAGATGATGGTCTGCACTCCAGGGCATTACA...TGTAACTGGAATTATGTTATACATTGCCCTTCCTCTCCCATAAGATGGACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCATGTAATGCCCTGGAGTaGAGACCATCATCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PIMNDKITVGKGLAVFIACNALE*RPSSVP
Trigger: GGGGACAGATGATGGTCTGCACTCCAGGGCATTACA...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR GCA 90 bp TCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACAGGCTTGTAGGGGTTTGTCCCTaGATGAATCAAGGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: SSKGRVNNNHSNFKTHRLVGVCP*MNQGVF
Trigger: AAAGACGCCTTGATTCATGCAGGGACAAACCCCTAC...AAGCCTGTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp GGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGTCCATCTGGATTGGATGGTGCTaGATGAGGTACGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: GNSKYCLGHSDTETLLSIWIGWC*MRYDLR
Trigger: ACGCAGGTCGTACCTCATGCAGCACCATCCAATCCA...GATGGACAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGTGTGGATTGGATGGTaGTGCATGAGGTACGACCTG +
Preference number: 4 (lower is better)
Translates to: GPIMNDKITVGKGLAVFIVWIGW*CMRYDL
Trigger: CAGGTCGTACCTCATGCAGCACCATCCAATCCACAC...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR GCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATATGGACCCTTTGGTGCTaGAGAAGGTGTGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIWTLWC*RRCDLR
Trigger: ACGCAGGTCACACCTTCTGCAGCACCAAAGGGTCCA...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR GCA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGTATGGACCCTTTGGTaGTGCAGAAGGTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: GPIMNDKITVGKGLAVFIVWTLW*CRRCDL
Trigger: CAGGTCACACCTTCTGCAGCACCAAAGGGTCCATAC...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR GCA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGTATGGACCCTTTGGTaGTGCAGAAGGTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: PIMNDKITVGKGLAVFIAVWTLW*CRRCDL
Trigger: CAGGTCACACCTTCTGCAGCACCAAAGGGTCCATAC...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR GCA 90 bp TGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACCTGATGTTGATGGAATaGCTTCCACATTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: CSSSKGRVNNNHSNFKTHLMLME*LPHFPL
Trigger: CAGGGGGAAATGTGGAAGGCATTCCATCAACATCAG...GTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp ATAACCACAGCAATTTCAAGACACACAGGCTTCCATTGTGAGATGGCTTGTTTACACAGCTACAATACATaGAGCCTTCCAGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: ITTAISRHTGFHCEMACLHSYNT*SLPERG
Trigger: TCCTCTCTCTGGAAGGCTGCATGTATTGTAGCTGTG...TAAACAAGCCATCTCACAATGGAAGCCTGTGTGTCTTGAAATTGCTGTGGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR GCA 90 bp CCTATGAATTTCTGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATCATGGAAAACACTCCTaGTTTGGGACAAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: PMNFCSSSKGRVNNNHSNHGKHS*FGTNWG
Trigger: GCCCCAGTTTGTCCCAAAGCAGGAGTGTTTTCCATG...ATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCAGAAATTCATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR GCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATAACTATCCACAGCTCCTaGCCATGCTCTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAITIHSS*PCSSRW
Trigger: CCACCTGCTAGAGCATGGGCAGGAGCTGTGGATAGT...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp AGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAAGGGCAGTCTGGTATGAACTTGTaGTCTGTCACCTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: RHKHLTLPYEFLQFFKGQSGMNL*SVTCTG
Trigger: ACCTGTGCAGGTGACAGAGCACAAGTTCATACCAGA...CTGCCCTTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCTCTGGTATGAACTTGTaGTCTGTCACCTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFSGMNL*SVTCTG
Trigger: ACCTGTGCAGGTGACAGAGCACAAGTTCATACCAGA...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp CACAGTGATACAGAAACACTTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTAAAGTGGTTGGCTCTCTaGTATGAACTTGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: HSDTETLLSILWERKGNVKWLAL*YELVLC
Trigger: ACAGAGCACAAGTTCATACCAGAGAGCCAACCACTT...TACATTGCCCTTCCTCTCCCATAAGATGGACAAAAGTGTTTCTGTATCACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp CCTATGAATTTCTGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTGGCGGGTAAGTGGTTaGCTCTCTGGTATGAACTTG +
Preference number: 4 (lower is better)
Translates to: PMNFCSSSKGRVNNNHSNWRVSG*LSGMNL
Trigger: CAAGTTCATACCAGAGAGCCAACCACTTACCCGCCA...ATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCAGAAATTCATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp TTTTGGAGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAAAGATGGGTCTCCTTGTaGAGGTCTGTCTCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: FWRHKHLTLPYEFLQFFKRWVSL*RSVSGV
Trigger: GACACCGGAGACAGACCTCCACAAGGAGACCCATCT...TTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp ACTGAAGGTTTTCATAAGTTCATAGAGAAAATCCCAAGGTGGGTCAAATTCCAGCTCACTTTCCCAAGATaGGTCTCCTTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TEGFHKFIEKIPRWVKFQLTFPR*VSLWRS
Trigger: AGACCTCCACAAGGAGACCCATCTTGGGAAAGTGAG...CTGGAATTTGACCCACCTTGGGATTTTCTCTATGAACTTATGAAAACCTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCACTCTTGTAATGCCCTaGAGTGCAGACCATCATCTG +
Preference number: 4 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFTLVMP*SADHHL
Trigger: CAGATGATGGTCTGCACTCCAGGGCATTACAAGAGT...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp CCTATGAATTTCTGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATCATGTATGGACCCTTTaGTGCTGCAGAAGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PMNFCSSSKGRVNNNHSNHVWTL*CCRRCD
Trigger: GTCACACCTTCTGCAGCACCAAAGGGTCCATACATG...ATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCAGAAATTCATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp GAGTTCTCTGATGTTGATGGAATGCCTTCCACATTTCCCCCTGGTATGAATCCTAAGCAAGTGACAACCTaGTCACAAAGTTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: EFSDVDGMPSTFPPGMNPKQVTT*SQSFLT
Trigger: TGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTT...AGGATTCATACCAGGGGGAAATGTGGAAGGCATTCCATCAACATCAGAGAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGAAGCAAGTGACAACCTaGTCACAAAGTTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLKQVTT*SQSFLT
Trigger: TGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTT...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp GGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGTCCATCGTGCCGAATGAGAGTTaGGCTCTGGCTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GNSKYCLGHSDTETLLSIVPNES*ALAKGF
Trigger: AAAGCCTTTAGCCAGAGCTCAACTCTCATTCGGCAC...GATGGACAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATGAGTGAGAACTaGGTGGTGACTGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: PIMNDKITVGKGLAVFIAAMSEN*VVTEGI
Trigger: GATCCCTTCAGTCACCACTCAGTTCTCACTCATTGC...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAATGAGTGAGAACTaGGTGGTGACTGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: GPIMNDKITVGKGLAVFIAMSEN*VVTEGI
Trigger: GATCCCTTCAGTCACCACTCAGTTCTCACTCATTGC...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp AAGCTGGGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGGCAATGAGTGAGAACTaGGTGGTGACTGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: KLGNSKYCLGHSDTETLLAMSEN*VVTEGI
Trigger: GATCCCTTCAGTCACCACTCAGTTCTCACTCATTGC...CAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACCCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp ATGGTCATAACTAGTCCCACCCCCACAATCATTTCTCACAGATTAAGCAGCATATATAGGACAAGCAAGTaGCAACCTGGTCACAAAGTT +
Preference number: 4 (lower is better)
Translates to: MVITSPTPTIISHRLSSIYRTSK*QPGHKV
Trigger: AACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATA...TATGCTGCTTAATCTGTGAGAAATGATTGTGGGGGTGGGACTAGTTATGACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344222.5
CDS-3UTR TCA 90 bp ATAACCACAGCAATTTCAAGACACACAGGCTTCCATTGTGAGATGGCTTGTTTAATGACAGGTGTCTCATaGGATTCTTGCCTATCACAG +
Preference number: 4 (lower is better)
Translates to: ITTAISRHTGFHCEMACLMTGVS*DSCLSQ
Trigger: CTGTGATAGGCAAGAATCTCATGAGACACCTGTCAT...TAAACAAGCCATCTCACAATGGAAGCCTGTGTGTCTTGAAATTGCTGTGGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR TCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGCTTAACATTGCCCTATaGATTTCTGCAGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLLNIAL*ISAVLQ
Trigger: TTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAG...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp CACAGTGATACAGAAACACTTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTAGTACATCTGCCTCTGTaGCCAAATTTCCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: HSDTETLLSILWERKGNVVHLPL*PNFPFF
Trigger: GAAAAATGGGAAATTTGGTCACAGAGGCAGATGTAC...TACATTGCCCTTCCTCTCCCATAAGATGGACAAAAGTGTTTCTGTATCACTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGTTGGCTCTCTGGTATaGACTTGTGCTCTGTCACCT +
Preference number: 4 (lower is better)
Translates to: PIMNDKITVGKGLAVFIAVGSLV*TCALSP
Trigger: AGGTGACAGAGCACAAGTTCATACCAGAGAGCCAAC...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR TCA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGCATAATCAGAGGATTTaGATCAAGGATGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLHNQRI*IKDESF
Trigger: GAAGCTTTCATCCTTGATTCAAATCCTCTGATTATG...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp ATAACTAGTCCCACCCCCACAATCATTTCTCACAGATTAAGCAGCATAAGAGCAGTCACTTTACCTTTCTaGATTTCCAAAAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: ITSPTPTIISHRLSSIRAVTLPF*ISKSPS
Trigger: GGAAGGGCTTTTGGAAATGCAGAAAGGTAAAGTGAC...TGCTCTTATGCTGCTTAATCTGTGAGAAATGATTGTGGGGGTGGGACTAGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344222.5
CDS-3UTR GCA 90 bp ACTATTAATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGTGTAATGCCCTGGAGTaGAGACCATCATCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TINSLHSSDHSVVHIHFRCNALE*RPSSVP
Trigger: GGGGACAGATGATGGTCTGCACTCCAGGGCATTACA...CCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAATTAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATAGTGTGGATTGGATGGTaGTGCATGAGGTACGACCTG +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIVWIGW*CMRYDL
Trigger: CAGGTCGTACCTCATGCAGCACCATCCAATCCACAC...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCATGGCGGGTAAGTGGTTaGCTCTCTGGTATGAACTTG +
Preference number: 4 (lower is better)
Translates to: PIMNDKITVGKGLAVFIAWRVSG*LSGMNL
Trigger: CAAGTTCATACCAGAGAGCCAACCACTTACCCGCCA...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTTGGCGGGTAAGTGGTTaGCTCTCTGGTATGAACTTG +
Preference number: 4 (lower is better)
Translates to: GPIMNDKITVGKGLAVFIWRVSG*LSGMNL
Trigger: CAAGTTCATACCAGAGAGCCAACCACTTACCCGCCA...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp AAGCTGGGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGAGACTGGCGGGTAAGTaGTTGGCTCTCTGGTATGAA +
Preference number: 4 (lower is better)
Translates to: KLGNSKYCLGHSDTETLLRLAGK*LALWYE
Trigger: TTCATACCAGAGAGCCAACCACTTACCCGCCAGTCT...CAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACCCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCACTCACTTTCCCAAGATaGGTCTCCTTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PIMNDKITVGKGLAVFIALTFPR*VSLWRS
Trigger: AGACCTCCACAAGGAGACCCATCTTGGGAAAGTGAG...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp ACTGAAGGTTTTCATAAGTTCATAGAGAAAATCCCAAGGTGGGTCAAATTCCAGACTCTTGTAATGCCCTaGAGTGCAGACCATCATCTG +
Preference number: 4 (lower is better)
Translates to: TEGFHKFIEKIPRWVKFQTLVMP*SADHHL
Trigger: CAGATGATGGTCTGCACTCCAGGGCATTACAAGAGT...CTGGAATTTGACCCACCTTGGGATTTTCTCTATGAACTTATGAAAACCTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCGTGTGGGTCCTATTATaGCGAATAAAAGTAGACCGG +
Preference number: 4 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFVWVLL*RIKVDR
Trigger: CCGGTCTACTTTTATTCGCCATAATAGGACCCACAC...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp TTTATAGGACAAGCAAGTGACAACCTGGTCACAAAGTTTTCTCACATCAATAACCATGTATGGACCCTTTaGTGCTGCAGAAGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: FIGQASDNLVTKFSHINNHVWTL*CCRRCD
Trigger: GTCACACCTTCTGCAGCACCAAAGGGTCCATACATG...GTTATTGATGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp TTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTATAACATAATTCCAGTTACACATGTATGGACCCTTTaGTGCTGCAGAAGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: FCPSYGRGRAMYNIIPVTHVWTL*CCRRCD
Trigger: GTCACACCTTCTGCAGCACCAAAGGGTCCATACATG...TGTAACTGGAATTATGTTATACATTGCCCTTCCTCTCCCATAAGATGGACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCATTTCCCTGGTTGCTGTaGGTCACATTCATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PIMNDKITVGKGLAVFIAFPWLL*VTFMEN
Trigger: GTTCTCCATGAATGTGACTCACAGCAACCAGGGAAA...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR TCA 90 bp AGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAAGGGCAGTATAGGACAAGCAAGTaGCAACCTGGTCACAAAGTT +
Preference number: 4 (lower is better)
Translates to: RHKHLTLPYEFLQFFKGQYRTSK*QPGHKV
Trigger: AACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATA...CTGCCCTTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGGCCATGGAGCTAAATaGCAGGTGTCTCATGAGATT +
Preference number: 4 (lower is better)
Translates to: PIMNDKITVGKGLAVFIAGHGAK*QVSHEI
Trigger: AATCTCATGAGACACCTGTCATTTAGCTCCATGGCC...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR TCA 90 bp AAACTGGAAAGCTGGGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAAGGCCATGGAGCTAAATaGCAGGTGTCTCATGAGATT +
Preference number: 4 (lower is better)
Translates to: KLESWVILNIVWDTVIQKGHGAK*QVSHEI
Trigger: AATCTCATGAGACACCTGTCATTTAGCTCCATGGCC...TTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACCCAGCTTTCCAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447310.5
CDS-3UTR TCA 90 bp GTACCAAACACTTCAGTGAAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAAACTGCATGAAGTTAAAGTaGACTCTGACATTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: VPNTSVKTVWKELEAKKNCMKLK*TLTFPS
Trigger: AGAGGGGAATGTCAGAGTTCACTTTAACTTCATGCA...GTTTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344222.5
CDS-3UTR TCA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTGTACATCTGCCTCTGTaGCCAAATTTCCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: KQPRHFLLEHMFHASISAVHLPL*PNFPFF
Trigger: GAAAAATGGGAAATTTGGTCACAGAGGCAGATGTAC...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp CATTGTGAGATGGCTTGTTTAAAGAAACTATTAATTCCCTACACTCTTCTGATCTGCACAGGTAGCATGTaGGAGGCCTCTCTTCACTAT +
Preference number: 4 (lower is better)
Translates to: HCEMACLKKLLIPYTLLICTGSM*EASLHY
Trigger: ATAGTGAAGAGAGGCCTCTCACATGCTACCTGTGCA...GATCAGAAGAGTGTAGGGAATTAATAGTTTCTTTAAACAAGCCATCTCACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATAGTTGGCTCTCTGGTATaGACTTGTGCTCTGTCACCT +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIVGSLV*TCALSP
Trigger: AGGTGACAGAGCACAAGTTCATACCAGAGAGCCAAC...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR GCA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCGTCACTTTACCTTTCTaGATTTCCAAAAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFVTLPF*ISKSPS
Trigger: GGAAGGGCTTTTGGAAATGCAGAAAGGTAAAGTGAC...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR GCA 90 bp ATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGATTTCTCGTAGGGGTTTGTCCCTaGATGAATCAAGGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: IPYTLLITLLFTFILGFLVGVCP*MNQGVF
Trigger: AAAGACGCCTTGATTCATGCAGGGACAAACCCCTAC...GAGAAATCCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp TTTATAGGACAAGCAAGTGACAACCTGGTCACAAAGTTTTCTCACATCAATAACGTAGGGGTTTGTCCCTaGATGAATCAAGGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: FIGQASDNLVTKFSHINNVGVCP*MNQGVF
Trigger: AAAGACGCCTTGATTCATGCAGGGACAAACCCCTAC...GTTATTGATGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGTAGGGGTTTGTCCCTaGATGAATCAAGGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: GPIMNDKITVGKGLAVFIVGVCP*MNQGVF
Trigger: AAAGACGCCTTGATTCATGCAGGGACAAACCCCTAC...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR GCA 90 bp ATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGATTTCTCCTGATGTTGATGGAATaGCTTCCACATTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: IPYTLLITLLFTFILGFLLMLME*LPHFPL
Trigger: CAGGGGGAAATGTGGAAGGCATTCCATCAACATCAG...GAGAAATCCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp GGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGTCCATCCACAGCTACAATACATaGAGCCTTCCAGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GNSKYCLGHSDTETLLSIHSYNT*SLPERG
Trigger: TCCTCTCTCTGGAAGGCTGCATGTATTGTAGCTGTG...GATGGACAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376230.7
ENST00000447310.5
CDS-3UTR GCA 90 bp AAGCTGGGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGCACAGCTACAATACATaGAGCCTTCCAGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: KLGNSKYCLGHSDTETLLHSYNT*SLPERG
Trigger: TCCTCTCTCTGGAAGGCTGCATGTATTGTAGCTGTG...CAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACCCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376230.7
ENST00000447310.5
CDS-3UTR GCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATAAGTAAGTTCCTTCCCTaGTCAAGGGCAGGACCCATA +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAISKFLP*SRAGPI
Trigger: TATGGGTCCTGCCCTTGAGCAGGGAAGGAACTTACT...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR CCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATATGGCGGGTAAGTGGTTaGCTCTCTGGTATGAACTTG +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIWRVSG*LSGMNL
Trigger: CAAGTTCATACCAGAGAGCCAACCACTTACCCGCCA...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATAAGACTGGCGGGTAAGTaGTTGGCTCTCTGGTATGAA +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIRLAGK*LALWYE
Trigger: TTCATACCAGAGAGCCAACCACTTACCCGCCAGTCT...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAACTCTTGTAATGCCCTaGAGTGCAGACCATCATCTG +
Preference number: 4 (lower is better)
Translates to: PIMNDKITVGKGLAVFIATLVMP*SADHHL
Trigger: CAGATGATGGTCTGCACTCCAGGGCATTACAAGAGT...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGAGAAAATCCCAAGGTaGGTCAAATTCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: GPIMNDKITVGKGLAVFIEKIPR*VKFQHG
Trigger: GCCATGCTGGAATTTGACCCACCTTGGGATTTTCTC...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp TTTATAGGACAAGCAAGTGACAACCTGGTCACAAAGTTTTCTCACATCAATAACGAGAAAATCCCAAGGTaGGTCAAATTCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: FIGQASDNLVTKFSHINNEKIPR*VKFQHG
Trigger: GCCATGCTGGAATTTGACCCACCTTGGGATTTTCTC...GTTATTGATGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp ACTATTAATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGAAAACACTCCTGCTTTaGGACAAACTGGGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: TINSLHSSDHSVVHIHFRKTLLL*DKLGPR
Trigger: CCTAGGCCCCAGTTTGTCCCAAAGCAGGAGTGTTTT...CCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAATTAATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp AGCAGCAAGTTCATAGTAGATCCTTGTACCAAACACTTCAGTGAAGACTGTATGTCAGTGAAGACTGTATaGAAAGAGCTGGAAGCTAAG +
Preference number: 4 (lower is better)
Translates to: SSKFIVDPCTKHFSEDCMSVKTV*KELEAK
Trigger: CTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGA...CATACAGTCTTCACTGAAGTGTTTGGTACAAGGATCTACTATGAACTTGCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCCTTCCAAATCACTTCTaGTGCTTTCCTTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFLPNHF*CFPSCF
Trigger: GAAGCAAGAAGGAAAGCACCAGAAGTGATTTGGAAG...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp ATAACCACAGCAATTTCAAGACACACAGGCTTCCATTGTGAGATGGCTTGTTTACTTTTGTCCATCTTATaGGAGAGGAAGGGCAATGTA +
Preference number: 4 (lower is better)
Translates to: ITTAISRHTGFHCEMACLLLSIL*ERKGNV
Trigger: TACATTGCCCTTCCTCTCCCATAAGATGGACAAAAG...TAAACAAGCCATCTCACAATGGAAGCCTGTGTGTCTTGAAATTGCTGTGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp CTTACAAATATTAAGATTTCTAATTCGTCTTTGCATGACCGACTTGCCGAGTTATTTCCCTGGTTGCTGTaGGTCACATTCATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: LTNIKISNSSLHDRLAELFPWLL*VTFMEN
Trigger: GTTCTCCATGAATGTGACTCACAGCAACCAGGGAAA...TAACTCGGCAAGTCGGTCATGCAAAGACGAATTAGAAATCTTAATATTTGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344222.5
CDS-3UTR TCA 90 bp CTTACAAATATTAAGATTTCTAATTCGTCTTTGCATGACCGACTTGCCGAGTTAGAACTGAGTGGTGACTaGAGGGATCCTTACATTCAC +
Preference number: 4 (lower is better)
Translates to: LTNIKISNSSLHDRLAELELSGD*RDPYIH
Trigger: GTGAATGTAAGGATCCCTTCAGTCACCACTCAGTTC...TAACTCGGCAAGTCGGTCATGCAAAGACGAATTAGAAATCTTAATATTTGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344222.5
CDS-3UTR TCA 90 bp TTTTGGAGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAAGAACTGAGTGGTGACTaGAGGGATCCTTACATTCAC +
Preference number: 4 (lower is better)
Translates to: FWRHKHLTLPYEFLQFFKELSGD*RDPYIH
Trigger: GTGAATGTAAGGATCCCTTCAGTCACCACTCAGTTC...TTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp TTTTGGAGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAAGTAGGGGTTTGTCCCTaGATGAATCAAGGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: FWRHKHLTLPYEFLQFFKVGVCP*MNQGVF
Trigger: AAAGACGCCTTGATTCATGCAGGGACAAACCCCTAC...TTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp AGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAAGGGCAGTTTCCTGACATTCTTTaGATTCGAAGGACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RHKHLTLPYEFLQFFKGQFPDIL*IRRTSS
Trigger: GGAAGAAGTCCTTCGAATGCAAAGAATGTCAGGAAA...CTGCCCTTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCTTTCCTGACATTCTTTaGATTCGAAGGACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFFPDIL*IRRTSS
Trigger: GGAAGAAGTCCTTCGAATGCAAAGAATGTCAGGAAA...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR GCA 90 bp TTTTGGAGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAACTGATGTTGATGGAATaGCTTCCACATTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: FWRHKHLTLPYEFLQFFKLMLME*LPHFPL
Trigger: CAGGGGGAAATGTGGAAGGCATTCCATCAACATCAG...TTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCTCCAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp TTTATAGGACAAGCAAGTGACAACCTGGTCACAAAGTTTTCTCACATCAATAACAAGTGGTTGGCTCTCTaGTATGAACTTGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: FIGQASDNLVTKFSHINNKWLAL*YELVLC
Trigger: ACAGAGCACAAGTTCATACCAGAGAGCCAACCACTT...GTTATTGATGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAAAGTGGTTGGCTCTCTaGTATGAACTTGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PIMNDKITVGKGLAVFIAKWLAL*YELVLC
Trigger: ACAGAGCACAAGTTCATACCAGAGAGCCAACCACTT...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATAACTCTTGTAATGCCCTaGAGTGCAGACCATCATCTG +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAITLVMP*SADHHL
Trigger: CAGATGATGGTCTGCACTCCAGGGCATTACAAGAGT...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGTGTGGGTCCTATTATaGCGAATAAAAGTAGACCGG +
Preference number: 4 (lower is better)
Translates to: GPIMNDKITVGKGLAVFIVWVLL*RIKVDR
Trigger: CCGGTCTACTTTTATTCGCCATAATAGGACCCACAC...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp TGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACAAGCAAGTGACAACCTaGTCACAAAGTTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: CSSSKGRVNNNHSNFKTHKQVTT*SQSFLT
Trigger: TGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTT...GTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATAGAGAAAATCCCAAGGTaGGTCAAATTCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIEKIPR*VKFQHG
Trigger: GCCATGCTGGAATTTGACCCACCTTGGGATTTTCTC...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp CCTATGAATTTCTGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATCTTCCAAATCACTTCTaGTGCTTTCCTTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PMNFCSSSKGRVNNNHSNLPNHF*CFPSCF
Trigger: GAAGCAAGAAGGAAAGCACCAGAAGTGATTTGGAAG...ATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCAGAAATTCATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATAATGACAGGTGTCTCATaGGATTCTTGCCTATCACAG +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIMTGVS*DSCLSQ
Trigger: CTGTGATAGGCAAGAATCTCATGAGACACCTGTCAT...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR TCA 90 bp TTTTGGAGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAATACCATTTAACTGGGTaGGGATCCTTCCAGACACAT +
Preference number: 4 (lower is better)
Translates to: FWRHKHLTLPYEFLQFFKYHLTG*GSFQTH
Trigger: ATGTGTCTGGAAGGATCCTCACCCAGTTAAATGGTA...TTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCTCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344222.5
CDS-3UTR TCA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCCTTAACATTGCCCTATaGATTTCTGCAGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFLNIAL*ISAVLQ
Trigger: TTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAG...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTCTTAACATTGCCCTATaGATTTCTGCAGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: KQPRHFLLEHMFHASISALNIAL*ISAVLQ
Trigger: TTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAG...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGTACATCTGCCTCTGTaGCCAAATTTCCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: GPIMNDKITVGKGLAVFIVHLPL*PNFPFF
Trigger: GAAAAATGGGAAATTTGGTCACAGAGGCAGATGTAC...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp AGCAGCAAGTTCATAGTAGATCCTTGTACCAAACACTTCAGTGAAGACTGTATGCATAATCAGAGGATTTaGATCAAGGATGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSKFIVDPCTKHFSEDCMHNQRI*IKDESF
Trigger: GAAGCTTTCATCCTTGATTCAAATCCTCTGATTATG...CATACAGTCTTCACTGAAGTGTTTGGTACAAGGATCTACTATGAACTTGCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATAAAGTGGTTGGCTCTCTaGTATGAACTTGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIKWLAL*YELVLC
Trigger: ACAGAGCACAAGTTCATACCAGAGAGCCAACCACTT...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATAGTGTGGGTCCTATTATaGCGAATAAAAGTAGACCGG +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIVWVLL*RIKVDR
Trigger: CCGGTCTACTTTTATTCGCCATAATAGGACCCACAC...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp ACTATTAATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGGTGTGGGTCCTATTATaGCGAATAAAAGTAGACCGG +
Preference number: 4 (lower is better)
Translates to: TINSLHSSDHSVVHIHFRVWVLL*RIKVDR
Trigger: CCGGTCTACTTTTATTCGCCATAATAGGACCCACAC...CCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAATTAATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATAGTGTCCTTTATCCCATaGAAAACACTCCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIVSFIP*KTLLLW
Trigger: CCAAAGCAGGAGTGTTTTCCATGGGATAAAGGACAC...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp ATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGATTTCTCTCAGTGAAGACTGTATaGAAAGAGCTGGAAGCTAAG +
Preference number: 4 (lower is better)
Translates to: IPYTLLITLLFTFILGFLSVKTV*KELEAK
Trigger: CTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGA...GAGAAATCCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CCA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTCTTTTGTCCATCTTATaGGAGAGGAAGGGCAATGTA +
Preference number: 4 (lower is better)
Translates to: GPIMNDKITVGKGLAVFILLSIL*ERKGNV
Trigger: TACATTGCCCTTCCTCTCCCATAAGATGGACAAAAG...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp TTTTGGAGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAATATAGGACAAGCAAGTaGCAACCTGGTCACAAAGTT +
Preference number: 4 (lower is better)
Translates to: FWRHKHLTLPYEFLQFFKYRTSK*QPGHKV
Trigger: AACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATA...TTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCTCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR TCA 90 bp ACTGAAGGTTTTCATAAGTTCATAGAGAAAATCCCAAGGTGGGTCAAATTCCAGCTTAACATTGCCCTATaGATTTCTGCAGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: TEGFHKFIEKIPRWVKFQLNIAL*ISAVLQ
Trigger: TTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAG...CTGGAATTTGACCCACCTTGGGATTTTCTCTATGAACTTATGAAAACCTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp AAGCTGGGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGTTTCCTGACATTCTTTaGATTCGAAGGACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KLGNSKYCLGHSDTETLLFPDIL*IRRTSS
Trigger: GGAAGAAGTCCTTCGAATGCAAAGAATGTCAGGAAA...CAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACCCAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR GCA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCATTTCCTGACATTCTTTaGATTCGAAGGACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PIMNDKITVGKGLAVFIAFPDIL*IRRTSS
Trigger: GGAAGAAGTCCTTCGAATGCAAAGAATGTCAGGAAA...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CCA 90 bp TTTATAGGACAAGCAAGTGACAACCTGGTCACAAAGTTTTCTCACATCAATAACGTAAGATTTCTGCTCTaGCCAAAGACTGTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: FIGQASDNLVTKFSHINNVRFLL*PKTVLN
Trigger: ATTAAGGACAGTCTTTGGCCAGAGCAGAAATCTTAC...GTTATTGATGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp AAGCTGGGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGGTAAGATTTCTGCTCTaGCCAAAGACTGTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: KLGNSKYCLGHSDTETLLVRFLL*PKTVLN
Trigger: ATTAAGGACAGTCTTTGGCCAGAGCAGAAATCTTAC...CAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACCCAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp TTTTGGAGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAACTTTTGTCCATCTTATaGGAGAGGAAGGGCAATGTA +
Preference number: 4 (lower is better)
Translates to: FWRHKHLTLPYEFLQFFKLLSIL*ERKGNV
Trigger: TACATTGCCCTTCCTCTCCCATAAGATGGACAAAAG...TTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCTCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
3UTR CAA 72 bp TGTCTGCTTACAAATATTAAGATTTCTAATTCGTCTTaGCATGACCGACTTGCCGAGTTAATTTACCGTCCA +
Preference number: 4 (lower is better)
Translates to: CLLTNIKISNSS*HDRLAELIYRP
Trigger: TGGACGGTAAATTAACTCGGCAAGTCGGTCATGCAAAGACGAATTAGAAATCTTAATATTTGTAAGCAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344222.5
CDS-3UTR CCA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATATTCATAGCAGGAAAATaGAGGAAATACATGTCCATA +
Preference number: 4 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIFIAGK*RKYMSI
Trigger: TATGGACATGTATTTCCTCCATTTTCCTGCTATGAA...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CCA 90 bp CATTGTGAGATGGCTTGTTTAAAGAAACTATTAATTCCCTACACTCTTCTGATCTTCATAGCAGGAAAATaGAGGAAATACATGTCCATA +
Preference number: 4 (lower is better)
Translates to: HCEMACLKKLLIPYTLLIFIAGK*RKYMSI
Trigger: TATGGACATGTATTTCCTCCATTTTCCTGCTATGAA...GATCAGAAGAGTGTAGGGAATTAATAGTTTCTTTAAACAAGCCATCTCACAATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS CCA 90 bp CGTCCTTCGTCTCCGCCATCCGACCGTTGGCAGGACGAGGCCGCGTaGGGCAGCTCCCACGGGCTCAAAACCCTACCCCGGGTCCTACAA +
Preference number: 5 (lower is better)
Translates to: RPSSPPSDRWQDEAA*GSSHGLKTLPRVLQ
Trigger: TTGTAGGACCCGGGGTAGGGTTTTGAGCCCGTGGGAGCTGCCCCACGCGGCCTCGTCCTGCCAACGGTCGGATGGCGGAGACGAAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000595560.1
ENST00000601415.5
CDS CCA 90 bp TCACCAACATCTGCGCTGCGTCCTTCGTCTCCGCCATCCGACCGTTaGCAGGACGAGGCCGCGTGGGGCAGCTCCCACGGGCTCAAAACC +
Preference number: 5 (lower is better)
Translates to: SPTSALRPSSPPSDR*QDEAAWGSSHGLKT
Trigger: GGTTTTGAGCCCGTGGGAGCTGCCCCACGCGGCCTCGTCCTGCCAACGGTCGGATGGCGGAGACGAAGGACGCAGCGCAGATGTTGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000595560.1
ENST00000601415.5
CDS CCA 90 bp GGCTTCCCCGGAGAAAGGCCCGCTCAGATAAGACTGGCGGGTAAGTaGTTGGCTCTCTGGTATGAACTTGTGCTCTGTCACCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: GFPGERPAQIRLAGK*LALWYELVLCHLHR
Trigger: CCTGTGCAGGTGACAGAGCACAAGTTCATACCAGAGAGCCAACCACTTACCCGCCAGTCTTATCTGAGCGGGCCTTTCTCCGGGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGTCCGCCATCCGACCGTaGGCAGGACGAGGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLSAIRP*AGRGRV
Trigger: CACGCGGCCTCGTCCTGCCAACGGTCGGATGGCGGA...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTGGCTTGAAGATGTTCTTCCTGTGCCAAGATGGGTCTCCTaGTGGAGGTCTGTCTCCGGT +
Preference number: 5 (lower is better)
Translates to: SRLLVAPCVPWLEDVLPVPRWVS*WRSVSG
Trigger: ACCGGAGACAGACCTCCACAAGGAGACCCATCTTGG...CACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS CCA 90 bp GGCTTCCCCGGAGAAAGGCCCGCTCAGATAAGACTGGCGGGTAAGTaGTTGGCTCTCTGGTATGAACTTGTGCTCTGTCACCTAGTGAAA +
Preference number: 5 (lower is better)
Translates to: GFPGERPAQIRLAGK*LALWYELVLCHLVK
Trigger: TTTCACTAGGTGACAGAGCACAAGTTCATACCAGAGAGCCAACCACTTACCCGCCAGTCTTATCTGAGCGGGCCTTTCTCCGGGGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506609.2
CDS-3UTR CAA 90 bp TCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTGGCTTGAAGATGTTCTTCCTGTGTGGACCAACTCTGGTTaGGGAACCCGATGCCCTAGT +
Preference number: 5 (lower is better)
Translates to: SRLLVAPCVPWLEDVLPVWTNSG*GTRCPS
Trigger: ACTAGGGCATCGGGTTCCCAAACCAGAGTTGGTCCA...CACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS GCA 90 bp TGGGTCTCCTTGTGGAGGTCTGTCTCCGGTGTCACTTTACCTTTCTaGATTTCCAAAAGCCCTTCCTCATCCCTAGCTCTCCCCAACCTC +
Preference number: 5 (lower is better)
Translates to: WVSLWRSVSGVTLPF*ISKSPSSSLALPNL
Trigger: GAGGTTGGGGAGAGCTAGGGATGAGGAAGGGCTTTTGGAAATGCAGAAAGGTAAAGTGACACCGGAGACAGACCTCCACAAGGAGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS CCA 90 bp GAAAGGCCCGCTCAGATAAGACTGGCGGGTAAGTGGTTGGCTCTCTaGTATGAACTTGTGCTCTGTCACCTAGTGAAACCAGAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: ERPAQIRLAGKWLAL*YELVLCHLVKPEAH
Trigger: GTGGGCTTCTGGTTTCACTAGGTGACAGAGCACAAGTTCATACCAGAGAGCCAACCACTTACCCGCCAGTCTTATCTGAGCGGGCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506609.2
CDS-3UTR CAA 90 bp TTTCCTATATTAGACAGTAAGTTCCTTCCCTGCTCAAGGGCAGGACCCATAGCCTGTAATCGCAGCACTTaGGGAGGCAGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: FPILDSKFLPCSRAGPIACNRST*GGRGGW
Trigger: CCACCCGCCTCTGCCTCCCAAAGTGCTGCGATTACA...GGCTATGGGTCCTGCCCTTGAGCAGGGAAGGAACTTACTGTCTAATATAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS CCA 90 bp CCGACAATCTCTGATGCAGACAAAGGGAGACCAGTCAGGAAGAGGTaGGAACAGAAAGGTCTGTCAAGAGAAAGGTGGGCAGTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: PTISDADKGRPVRKR*EQKGLSRERWAVPV
Trigger: CACTGGAACTGCCCACCTTTCTCTTGACAGACCTTTCTGTTCCCACCTCTTCCTGACTGGTCTCCCTTTGTCTGCATCAGAGATTGTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595560.1
CDS-3UTR CAA 90 bp CTTGAACCCAGGGCCTTAGGTACAAGTACAGCCACAGCTACAATACATGCAGCCCTGGCGGGTAAGTGGTaGGCTCTCTGGTATGAACTT +
Preference number: 5 (lower is better)
Translates to: LEPRALGTSTATATIHAALAGKW*ALWYEL
Trigger: AAGTTCATACCAGAGAGCCAACCACTTACCCGCCAG...GGCTGCATGTATTGTAGCTGTGGCTGTACTTGTACCTAAGGCCCTGGGTTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS CCA 90 bp TCTGCTCTTCCCCTTTTTCCAGGAGTTTCCTGTCTTTCCCAGAGTTaGACATGGGCCCTTCTTCTTTCCTTGGTTCTTGACCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: SALPLFPGVSCLSQS*TWALLLSLVLDLHR
Trigger: CCTGTGCAGGTCAAGAACCAAGGAAAGAAGAAGGGCCCATGTCCAACTCTGGGAAAGACAGGAAACTCCTGGAAAAAGGGGAAGAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601415.5
CDS-3UTR CAA 90 bp TCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTGGCTTGAAGATGTTCTTCCTGTGCCAACCTCGAATCACTaGAGGTTGAAGATTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SRLLVAPCVPWLEDVLPVPTSNH*RLKIPE
Trigger: CTCTGGAATCTTCAACCTCAAGTGATTCGAGGTTGG...CACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGCCAAGATGGGTCTCCTaGTGGAGGTCTGTCTCCGGT +
Preference number: 5 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLPRWVS*WRSVSG
Trigger: ACCGGAGACAGACCTCCACAAGGAGACCCATCTTGG...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TTTCCTATATTAGACAGTAAGTTCCTTCCCTGCTCAAGGGCAGGACCCATAGCCCTGGCGGGTAAGTGGTaGGCTCTCTGGTATGAACTT +
Preference number: 5 (lower is better)
Translates to: FPILDSKFLPCSRAGPIALAGKW*ALWYEL
Trigger: AAGTTCATACCAGAGAGCCAACCACTTACCCGCCAG...GGCTATGGGTCCTGCCCTTGAGCAGGGAAGGAACTTACTGTCTAATATAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR CAA 90 bp CTTGAACCCAGGGCCTTAGGTACAAGTACAGCCACAGCTACAATACATGCAGCCCAGTGGGTAAAGGCCTaGCTGTATTCATTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: LEPRALGTSTATATIHAAQWVKA*LYSLQQ
Trigger: TTGCTGCAATGAATACAGCAAGGCCTTTACCCACTG...GGCTGCATGTATTGTAGCTGTGGCTGTACTTGTACCTAAGGCCCTGGGTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CAA 90 bp TTTTGGAGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAATCCGCCATCCGACCGTaGGCAGGACGAGGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: FWRHKHLTLPYEFLQFFKSAIRP*AGRGRV
Trigger: CACGCGGCCTCGTCCTGCCAACGGTCGGATGGCGGA...TTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCTCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TCTCGGCTTCTGGTAGCCCCGTGTGTTCCTTGGCTTGAAGATGTTCTTCCTGTGCCTGGAAAGAACCCTTaGATGACAGCCAATATGTTT +
Preference number: 5 (lower is better)
Translates to: SRLLVAPCVPWLEDVLPVPGKNP*MTANMF
Trigger: AAACATATTGGCTGTCATCAAAGGGTTCTTTCCAGG...CACAGGAAGAACATCTTCAAGCCAAGGAACACACGGGGCTACCAGAAGCCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CAA 90 bp TTTCCTATATTAGACAGTAAGTTCCTTCCCTGCTCAAGGGCAGGACCCATAGCCCCAACCTCGAATCACTaGAGGTTGAAGATTCCAGAG +
Preference number: 5 (lower is better)
Translates to: FPILDSKFLPCSRAGPIAPTSNH*RLKIPE
Trigger: CTCTGGAATCTTCAACCTCAAGTGATTCGAGGTTGG...GGCTATGGGTCCTGCCCTTGAGCAGGGAAGGAACTTACTGTCTAATATAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR CAA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGTGCATTTGTAGGGGTTaGTCCCTGCATGAATCAAGG +
Preference number: 5 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLCICRG*SLHESR
Trigger: CCTTGATTCATGCAGGGACAAACCCCTACAAATGCA...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp ACTAGATCACCATATGACCTAGCCATTCAGCTGCAAGGTACATTTCTCATGTATCTGGCGGGTAAGTGGTaGGCTCTCTGGTATGAACTT +
Preference number: 5 (lower is better)
Translates to: TRSPYDLAIQLQGTFLMYLAGKW*ALWYEL
Trigger: AAGTTCATACCAGAGAGCCAACCACTTACCCGCCAG...ATACATGAGAAATGTACCTTGCAGCTGAATGGCTAGGTCATATGGTGATCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCCTGGCGGGTAAGTGGTaGGCTCTCTGGTATGAACTT +
Preference number: 5 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFLAGKW*ALWYEL
Trigger: AAGTTCATACCAGAGAGCCAACCACTTACCCGCCAG...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CAA 90 bp CCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCACCAAGATGGGTCTCCTaGTGGAGGTCTGTCTCCGGT +
Preference number: 5 (lower is better)
Translates to: PIMNDKITVGKGLAVFIAPRWVS*WRSVSG
Trigger: ACCGGAGACAGACCTCCACAAGGAGACCCATCTTGG...TGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CAA 90 bp ACTATTAATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGTGTAATCGCAGCACTTaGGGAGGCAGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: TINSLHSSDHSVVHIHFRCNRST*GGRGGW
Trigger: CCACCCGCCTCTGCCTCCCAAAGTGCTGCGATTACA...CCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAATTAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR CAA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATACCAAGATGGGTCTCCTaGTGGAGGTCTGTCTCCGGT +
Preference number: 5 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIPRWVS*WRSVSG
Trigger: ACCGGAGACAGACCTCCACAAGGAGACCCATCTTGG...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CAA 90 bp CACAGTGATACAGAAACACTTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTATGCATTTGTAGGGGTTaGTCCCTGCATGAATCAAGG +
Preference number: 5 (lower is better)
Translates to: HSDTETLLSILWERKGNVCICRG*SLHESR
Trigger: CCTTGATTCATGCAGGGACAAACCCCTACAAATGCA...TACATTGCCCTTCCTCTCCCATAAGATGGACAAAAGTGTTTCTGTATCACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGCCTGGAAAGAACCCTTaGATGACAGCCAATATGTTT +
Preference number: 5 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLPGKNP*MTANMF
Trigger: AAACATATTGGCTGTCATCAAAGGGTTCTTTCCAGG...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CAA 90 bp ATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGATTTCTCTGGACCAACTCTGGTTaGGGAACCCGATGCCCTAGT +
Preference number: 5 (lower is better)
Translates to: IPYTLLITLLFTFILGFLWTNSG*GTRCPS
Trigger: ACTAGGGCATCGGGTTCCCAAACCAGAGTTGGTCCA...GAGAAATCCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTTGGACCAACTCTGGTTaGGGAACCCGATGCCCTAGT +
Preference number: 5 (lower is better)
Translates to: GPIMNDKITVGKGLAVFIWTNSG*GTRCPS
Trigger: ACTAGGGCATCGGGTTCCCAAACCAGAGTTGGTCCA...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTCTGGCGGGTAAGTGGTaGGCTCTCTGGTATGAACTT +
Preference number: 5 (lower is better)
Translates to: GPIMNDKITVGKGLAVFILAGKW*ALWYEL
Trigger: AAGTTCATACCAGAGAGCCAACCACTTACCCGCCAG...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CAA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCCCAACCTCGAATCACTaGAGGTTGAAGATTCCAGAG +
Preference number: 5 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFPTSNH*RLKIPE
Trigger: CTCTGGAATCTTCAACCTCAAGTGATTCGAGGTTGG...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CAA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCTGCATTTGTAGGGGTTaGTCCCTGCATGAATCAAGG +
Preference number: 5 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFCICRG*SLHESR
Trigger: CCTTGATTCATGCAGGGACAAACCCCTACAAATGCA...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CAA 90 bp TGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACTGTCTCATGAGATTCTaGCCTATCACAGCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: CSSSKGRVNNNHSNFKTHCLMRF*PITAAS
Trigger: ACTTGCTGCTGTGATAGGCAAGAATCTCATGAGACA...GTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR CAA 90 bp AGACACAAACACTTAACATTGCCCTATGAATTTCTGCAGTTCTTCAAAGGGCAGTGTCTCATGAGATTCTaGCCTATCACAGCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: RHKHLTLPYEFLQFFKGQCLMRF*PITAAS
Trigger: ACTTGCTGCTGTGATAGGCAAGAATCTCATGAGACA...CTGCCCTTTGAAGAACTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344222.5
ENST00000447310.5
CDS-3UTR CAA 90 bp GTGGGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTTCTAATTCGTCTTaGCATGACCGACTTGCCGAG +
Preference number: 5 (lower is better)
Translates to: VGPIMNDKITVGKGLAVFISNSS*HDRLAE
Trigger: CTCGGCAAGTCGGTCATGCAAAGACGAATTAGAAAT...GAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344222.5
CDS-3UTR CAA 90 bp TGGCTTGAAGATGTTCTTCCTGTGTCTTCACATCGTCTTCCCTCTGTACATCTGCATATGAGTAGACCATaGACAGAAGAGGAAAAACAA +
Preference number: 5 (lower is better)
Translates to: WLEDVLPVSSHRLPSVHLHMSRP*TEEEKQ
Trigger: TTGTTTTTCCTCTTCTGTCAATGGTCTACTCATATG...CAGATGTACAGAGGGAAGACGATGTGAAGACACAGGAAGAACATCTTCAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTATAACATAATTCCAGTTACACCAACCTCGAATCACTaGAGGTTGAAGATTCCAGAG +
Preference number: 5 (lower is better)
Translates to: FCPSYGRGRAMYNIIPVTPTSNH*RLKIPE
Trigger: CTCTGGAATCTTCAACCTCAAGTGATTCGAGGTTGG...TGTAACTGGAATTATGTTATACATTGCCCTTCCTCTCCCATAAGATGGACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp AAGCTGGGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGTGCATTTGTAGGGGTTaGTCCCTGCATGAATCAAGG +
Preference number: 5 (lower is better)
Translates to: KLGNSKYCLGHSDTETLLCICRG*SLHESR
Trigger: CCTTGATTCATGCAGGGACAAACCCCTACAAATGCA...CAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACCCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TTTATAGGACAAGCAAGTGACAACCTGGTCACAAAGTTTTCTCACATCAATAACTGCATTTGTAGGGGTTaGTCCCTGCATGAATCAAGG +
Preference number: 5 (lower is better)
Translates to: FIGQASDNLVTKFSHINNCICRG*SLHESR
Trigger: CCTTGATTCATGCAGGGACAAACCCCTACAAATGCA...GTTATTGATGTGAGAAAACTTTGTGACCAGGTTGTCACTTGCTTGTCCTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp AAGCTGGGTAATTCTAAATATTGTCTGGGACACAGTGATACAGAAACACTTTTGCAGTGGGTAAAGGCCTaGCTGTATTCATTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: KLGNSKYCLGHSDTETLLQWVKA*LYSLQQ
Trigger: TTGCTGCAATGAATACAGCAAGGCCTTTACCCACTG...CAAAAGTGTTTCTGTATCACTGTGTCCCAGACAATATTTAGAATTACCCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTATGAGTTCTCTGATGTaGATGGAATGCCTTCCACAT +
Preference number: 5 (lower is better)
Translates to: KQPRHFLLEHMFHASISAMSSLM*MECLPH
Trigger: ATGTGGAAGGCATTCCATCAACATCAGAGAACTCAT...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACCCTGGAAAGAACCCTTaGATGACAGCCAATATGTTT +
Preference number: 5 (lower is better)
Translates to: CSSSKGRVNNNHSNFKTHPGKNP*MTANMF
Trigger: AAACATATTGGCTGTCATCAAAGGGTTCTTTCCAGG...GTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CAA 90 bp ATGGTCATAACTAGTCCCACCCCCACAATCATTTCTCACAGATTAAGCAGCATACACAAACACTTAACATaGCCCTATGAATTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: MVITSPTPTIISHRLSSIHKHLT*PYEFLQ
Trigger: CTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTG...TATGCTGCTTAATCTGTGAGAAATGATTGTGGGGGTGGGACTAGTTATGACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344222.5
CDS-3UTR CAA 90 bp ACTATTAATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGCCAACCTCGAATCACTaGAGGTTGAAGATTCCAGAG +
Preference number: 5 (lower is better)
Translates to: TINSLHSSDHSVVHIHFRPTSNH*RLKIPE
Trigger: CTCTGGAATCTTCAACCTCAAGTGATTCGAGGTTGG...CCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAATTAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp ATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTGCAGCAATACAGTGGGTAAAGGCCTaGCTGTATTCATTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: MNDKITVGKGLAVFIAAIQWVKA*LYSLQQ
Trigger: TTGCTGCAATGAATACAGCAAGGCCTTTACCCACTG...TATTGCTGCAATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS-3UTR CAA 90 bp ACTATTAATTCCCTACACTCTTCTGATCACTCTGTTGTTCACATTCATTTTAGGCAGTGGGTAAAGGCCTaGCTGTATTCATTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: TINSLHSSDHSVVHIHFRQWVKA*LYSLQQ
Trigger: TTGCTGCAATGAATACAGCAAGGCCTTTACCCACTG...CCTAAAATGAATGTGAACAACAGAGTGATCAGAAGAGTGTAGGGAATTAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACAGGCTTCACAAACACTTAACATaGCCCTATGAATTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: SSKGRVNNNHSNFKTHRLHKHLT*PYEFLQ
Trigger: CTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTG...AAGCCTGTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp CACAGTGATACAGAAACACTTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTAACCTTATTTTTAAGGTaGAATCAAGCTGGTGGTGAT +
Preference number: 5 (lower is better)
Translates to: HSDTETLLSILWERKGNVTLFLR*NQAGGD
Trigger: ATCACCACCAGCTTGATTCAACCTTAAAAATAAGGT...TACATTGCCCTTCCTCTCCCATAAGATGGACAAAAGTGTTTCTGTATCACTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp GGTCCCATTATGAATGATAAAATAACAGTGGGTAAAGGCCTTGCTGTATTCATTATGAGTTCTCTGATGTaGATGGAATGCCTTCCACAT +
Preference number: 5 (lower is better)
Translates to: GPIMNDKITVGKGLAVFIMSSLM*MECLPH
Trigger: ATGTGGAAGGCATTCCATCAACATCAGAGAACTCAT...AATGAATACAGCAAGGCCTTTACCCACTGTTATTTTATCATTCATAATGGGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTATAACATAATTCCAGTTACAATGAGTTCTCTGATGTaGATGGAATGCCTTCCACAT +
Preference number: 5 (lower is better)
Translates to: FCPSYGRGRAMYNIIPVTMSSLM*MECLPH
Trigger: ATGTGGAAGGCATTCCATCAACATCAGAGAACTCAT...TGTAACTGGAATTATGTTATACATTGCCCTTCCTCTCCCATAAGATGGACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TGCAGTTCTTCAAAGGGCAGAGTGAATAATAACCACAGCAATTTCAAGACACACACTCCAACATCTTTTTaGGAGACACAAACACTTAAC +
Preference number: 5 (lower is better)
Translates to: CSSSKGRVNNNHSNFKTHTPTSF*ETQTLN
Trigger: GTTAAGTGTTTGTGTCTCCAAAAAAGATGTTGGAGT...GTGTGTCTTGAAATTGCTGTGGTTATTATTCACTCTGCCCTTTGAAGAACTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp ACTAGATCACCATATGACCTAGCCATTCAGCTGCAAGGTACATTTCTCATGTATACTCCAACATCTTTTTaGGAGACACAAACACTTAAC +
Preference number: 5 (lower is better)
Translates to: TRSPYDLAIQLQGTFLMYTPTSF*ETQTLN
Trigger: GTTAAGTGTTTGTGTCTCCAAAAAAGATGTTGGAGT...ATACATGAGAAATGTACCTTGCAGCTGAATGGCTAGGTCATATGGTGATCTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp GTACCAAACACTTCAGTGAAGACTGTATGGAAAGAGCTGGAAGCTAAGAAAAACACTCCAACATCTTTTTaGGAGACACAAACACTTAAC +
Preference number: 5 (lower is better)
Translates to: VPNTSVKTVWKELEAKKNTPTSF*ETQTLN
Trigger: GTTAAGTGTTTGTGTCTCCAAAAAAGATGTTGGAGT...GTTTTTCTTAGCTTCCAGCTCTTTCCATACAGTCTTCACTGAAGTGTTTGGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
CDS-3UTR CAA 90 bp AAACAACCCAGACACTTCTTACTAGAACATATGTTCCATGCTTCTATCTCGGCTCATATGAGTAGACCATaGACAGAAGAGGAAAAACAA +
Preference number: 5 (lower is better)
Translates to: KQPRHFLLEHMFHASISAHMSRP*TEEEKQ
Trigger: TTGTTTTTCCTCTTCTGTCAATGGTCTACTCATATG...AGCCGAGATAGAAGCATGGAACATATGTTCTAGTAAGAAGTGTCTGGGTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp ACTGAAGGTTTTCATAAGTTCATAGAGAAAATCCCAAGGTGGGTCAAATTCCAGACCTTATTTTTAAGGTaGAATCAAGCTGGTGGTGAT +
Preference number: 5 (lower is better)
Translates to: TEGFHKFIEKIPRWVKFQTLFLR*NQAGGD
Trigger: ATCACCACCAGCTTGATTCAACCTTAAAAATAAGGT...CTGGAATTTGACCCACCTTGGGATTTTCTCTATGAACTTATGAAAACCTTCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp CATTGTGAGATGGCTTGTTTAAAGAAACTATTAATTCCCTACACTCTTCTGATCCACAAACACTTAACATaGCCCTATGAATTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: HCEMACLKKLLIPYTLLIHKHLT*PYEFLQ
Trigger: CTGCAGAAATTCATAGGGCAATGTTAAGTGTTTGTG...GATCAGAAGAGTGTAGGGAATTAATAGTTTCTTTAAACAAGCCATCTCACAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTATAACATAATTCCAGTTACAACCTTATTTTTAAGGTaGAATCAAGCTGGTGGTGAT +
Preference number: 5 (lower is better)
Translates to: FCPSYGRGRAMYNIIPVTTLFLR*NQAGGD
Trigger: ATCACCACCAGCTTGATTCAACCTTAAAAATAAGGT...TGTAACTGGAATTATGTTATACATTGCCCTTCCTCTCCCATAAGATGGACAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS-3UTR CAA 90 bp TTTTGTCCATCTTATGGGAGAGGAAGGGCAATGTATAACATAATTCCAGTTACACATATGAGTAGACCATaGACAGAAGAGGAAAAACAA +
Preference number: 5 (lower is better)
Translates to: FCPSYGRGRAMYNIIPVTHMSRP*TEEEKQ
Trigger: TTGTTTTTCCTCTTCTGTCAATGGTCTACTCATATG...TGTAACTGGAATTATGTTATACATTGCCCTTCCTCTCCCATAAGATGGACAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS CCA 72 bp TCTGCGCTGCGTCCTTCGTCTCCGCCATCCGACCGTTaGCAGGACGAGGCCGCGTGGGGCAGCTCCCACGGG +
Preference number: 6 (lower is better)
Translates to: SALRPSSPPSDR*QDEAAWGSSHG
Trigger: CCCGTGGGAGCTGCCCCACGCGGCCTCGTCCTGCCAACGGTCGGATGGCGGAGACGAAGGACGCAGCGCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000595560.1
ENST00000601415.5
CDS CCA 72 bp TCTCCGCCATCCGACCGTTGGCAGGACGAGGCCGCGTaGGGCAGCTCCCACGGGCTCAAAACCCTACCCCGG +
Preference number: 6 (lower is better)
Translates to: SPPSDRWQDEAA*GSSHGLKTLPR
Trigger: CCGGGGTAGGGTTTTGAGCCCGTGGGAGCTGCCCCACGCGGCCTCGTCCTGCCAACGGTCGGATGGCGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000595560.1
ENST00000601415.5
CDS CAA 72 bp ATCTGCGCTGCGTCCTTCGTCTCCGCCATCCGACCGTaGGCAGGACGAGGCCGCGTGGGGCAGCTCCCACGG +
Preference number: 6 (lower is better)
Translates to: ICAASFVSAIRP*AGRGRVGQLPR
Trigger: CCGTGGGAGCTGCCCCACGCGGCCTCGTCCTGCCAACGGTCGGATGGCGGAGACGAAGGACGCAGCGCAGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000595560.1
ENST00000601415.5
CDS CAA 90 bp GTCACCAACATCTGCGCTGCGTCCTTCGTCTCCGCCATCCGACCGTaGGCAGGACGAGGCCGCGTGGGGCAGCTCCCACGGGCTCAAAAC +
Preference number: 6 (lower is better)
Translates to: VTNICAASFVSAIRP*AGRGRVGQLPRAQN
Trigger: GTTTTGAGCCCGTGGGAGCTGCCCCACGCGGCCTCGTCCTGCCAACGGTCGGATGGCGGAGACGAAGGACGCAGCGCAGATGTTGGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000595560.1
ENST00000601415.5
CDS TCA 72 bp GCCCCAGTCGCCCTACCATCCTTCCCAGCACAGTTCTaGGAGCGCGGACCAACACGCCCCACCACAAACGTC +
Preference number: 6 (lower is better)
Translates to: APVALPSFPAQF*ERGPTRPTTNV
Trigger: GACGTTTGTGGTGGGGCGTGTTGGTCCGCGCTCTCAGAACTGTGCTGGGAAGGATGGTAGGGCGACTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000595560.1
CDS CCA 72 bp GGAGAAAGGCCCGCTCAGATAAGACTGGCGGGTAAGTaGTTGGCTCTCTGGTATGAACTTGTGCTCTGTCAC +
Preference number: 6 (lower is better)
Translates to: GERPAQIRLAGK*LALWYELVLCH
Trigger: GTGACAGAGCACAAGTTCATACCAGAGAGCCAACCACTTACCCGCCAGTCTTATCTGAGCGGGCCTTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS CAA 72 bp GAAAGGCCCGCTCAGATAAGACTGGCGGGTAAGTGGTaGGCTCTCTGGTATGAACTTGTGCTCTGTCACCTG +
Preference number: 6 (lower is better)
Translates to: ERPAQIRLAGKW*ALWYELVLCHL
Trigger: CAGGTGACAGAGCACAAGTTCATACCAGAGAGCCAACCACTTACCCGCCAGTCTTATCTGAGCGGGCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
CDS CAA 90 bp TTCCCCGGAGAAAGGCCCGCTCAGATAAGACTGGCGGGTAAGTGGTaGGCTCTCTGGTATGAACTTGTGCTCTGTCACCTAGTGAAACCA +
Preference number: 6 (lower is better)
Translates to: FPGERPAQIRLAGKW*ALWYELVLCHLVKP
Trigger: TGGTTTCACTAGGTGACAGAGCACAAGTTCATACCAGAGAGCCAACCACTTACCCGCCAGTCTTATCTGAGCGGGCCTTTCTCCGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506609.2
CDS CAA 72 bp GAAAGGCCCGCTCAGATAAGACTGGCGGGTAAGTGGTaGGCTCTCTGGTATGAACTTGTGCTCTGTCACCTA +
Preference number: 6 (lower is better)
Translates to: ERPAQIRLAGKW*ALWYELVLCHL
Trigger: TAGGTGACAGAGCACAAGTTCATACCAGAGAGCCAACCACTTACCCGCCAGTCTTATCTGAGCGGGCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506609.2
CDS CAA 90 bp CAGAAAGGTCTGTCAAGAGAAAGGTGGGCAGTTCCAGTGACCTTTTaGCCTGGCCAAGAATCAGGGTTAGGGTCCTCCTCAGGGATGAGA +
Preference number: 6 (lower is better)
Translates to: QKGLSRERWAVPVTF*PGQESGLGSSSGMR
Trigger: TCTCATCCCTGAGGAGGACCCTAACCCTGATTCTTGGCCAGGCAAAAAGGTCACTGGAACTGCCCACCTTTCTCTTGACAGACCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595560.1
CDS GCA 72 bp TTGTGGAGGTCTGTCTCCGGTGTCACTTTACCTTTCTaGATTTCCAAAAGCCCTTCCTCATCCCTAGCTCTC +
Preference number: 6 (lower is better)
Translates to: LWRSVSGVTLPF*ISKSPSSSLAL
Trigger: GAGAGCTAGGGATGAGGAAGGGCTTTTGGAAATGCAGAAAGGTAAAGTGACACCGGAGACAGACCTCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344222.5
ENST00000376230.7
ENST00000447310.5
ENST00000457177.5
ENST00000506609.2
CDS CCA 72 bp GCTCAGATAAGACTGGCGGGTAAGTGGTTGGCTCTCTaGTATGAACTTGTGCTCTGTCACCTAGTGAAACCA +
Preference number: 6 (lower is better)
Translates to: AQIRLAGKWLAL*YELVLCHLVKP
Trigger: TGGTTTCACTAGGTGACAGAGCACAAGTTCATACCAGAGAGCCAACCACTTACCCGCCAGTCTTATCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506609.2