RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF549 (Homo sapiens)

Ensembl gene IDs: ENSG00000121406

Ensembl transcript IDs: ENST00000240719.7, ENST00000376233.8, ENST00000594943.1, ENST00000602149.1

Found 548 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAGGCTGGCTCCTCATAGGGATGCTGGGTGCTGCAGCCTTGACTaGGGCAGCAGGCCCCCATGTTCAATCCATCCTCCCACCTTGGAA +
Preference number: 1 (lower is better)
Translates to: LRLAPHRDAGCCSLD*GSRPPCSIHPPTLE
Trigger: TTCCAAGGTGGGAGGATGGATTGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATGAGGAGCCAGCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 90 bp GGAAACCTTGGACAATACCCAGGCTTTCTCGGGCAGAGGTCCCTGTaGCCTTCCGCAGTGCATTGTGTCCCTGGGTACCCGAGACGGGAG +
Preference number: 1 (lower is better)
Translates to: GNLGQYPGFLGQRSL*PSAVHCVPGYPRRE
Trigger: CTCCCGTCTCGGGTACCCAGGGACACAATGCACTGCGGAAGGCCACAGGGACCTCTGCCCGAGAAAGCCTGGGTATTGTCCAAGGTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 90 bp CTTCTGATTGTCCTCAGGCTGGCTCCTCATAGGGATGCTGGGTGCTaGAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCAATCCATCCT +
Preference number: 1 (lower is better)
Translates to: LLIVLRLAPHRDAGC*SLDWGSRPPCSIHP
Trigger: AGGATGGATTGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATGAGGAGCCAGCCTGAGGACAATCAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 90 bp AGGCTTCTGATTGTCCTCAGGCTGGCTCCTCATAGGGATGCTGGGTaGTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCAATCCAT +
Preference number: 1 (lower is better)
Translates to: RLLIVLRLAPHRDAG*CSLDWGSRPPCSIH
Trigger: ATGGATTGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATGAGGAGCCAGCCTGAGGACAATCAGAAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 90 bp CCTGAGGTGTGGTTGGCTCCAGGCTTGTTCGGTGCCGCAGCCCAGTaGCGCCATCAAGGATGTCTTGGTTCTCTGTTCCTTCTTCTTGGT +
Preference number: 1 (lower is better)
Translates to: PEVWLAPGLFGAAAQ*RHQGCLGSLFLLLG
Trigger: ACCAAGAAGAAGGAACAGAGAACCAAGACATCCTTGATGGCGTCACTGGGCTGCGGCACCGAACAAGCCTGGAGCCAACCACACCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 90 bp AGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTTGTGTGCCTaGACAACGTTGGCTTCCATAGACGGAGGTCATGGGCAGTGGGTG +
Preference number: 1 (lower is better)
Translates to: STPLPCPMAVKVLCA*TTLASIDGGHGQWV
Trigger: CACCCACTGCCCATGACCTCCGTCTATGGAAGCCAACGTTGTTCAGGCACACAACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 90 bp GAGGTGGAAGAGGGTAACAGTGTTCCAGGTGGAGGAACCAGCGTGTaGAAAGTGACAGGGAGCTCAGCTCTTGGGAGAGCCAAAGGATCA +
Preference number: 1 (lower is better)
Translates to: EVEEGNSVPGGGTSV*KVTGSSALGRAKGS
Trigger: TGATCCTTTGGCTCTCCCAAGAGCTGAGCTCCCTGTCACTTTTCACACGCTGGTTCCTCCACCTGGAACACTGTTACCCTCTTCCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 90 bp AAGCAGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTTGTGTaGCTGAACAACGTTGGCTTCCATAGACGGAGGTCATGGGCAGTG +
Preference number: 1 (lower is better)
Translates to: KQHTFAVSHGCQSVV*LNNVGFHRRRSWAV
Trigger: CACTGCCCATGACCTCCGTCTATGGAAGCCAACGTTGTTCAGGCACACAACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 90 bp AAAAGTGACAGGGAGCTCAGCTCTTGGGAGAGCCAAAGGATCATCTaGTTCACCTTTCCCACAGCCCTGTCCCAGAACTCAAAGCCAGGC +
Preference number: 1 (lower is better)
Translates to: KSDRELSSWESQRII*FTFPTALSQNSKPG
Trigger: GCCTGGCTTTGAGTTCTGGGACAGGGCTGTGGGAAAGGTGAATCAGATGATCCTTTGGCTCTCCCAAGAGCTGAGCTCCCTGTCACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 90 bp AGGCTTGTTCGGTGCCGCAGCCCAGTGACGCCATCAAGGATGTCTTaGTTCTCTGTTCCTTCTTCTTGGTTCAGGCTTCTGATTGTCCTC +
Preference number: 1 (lower is better)
Translates to: RLVRCRSPVTPSRMS*FSVPSSWFRLLIVL
Trigger: GAGGACAATCAGAAGCCTGAACCAAGAAGAAGGAACAGAGAACCAAGACATCCTTGATGGCGTCACTGGGCTGCGGCACCGAACAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 90 bp CAAGGATGTCTTGGTTCTCTGTTCCTTCTTCTTGGTTCAGGCTTCTaGTTGTCCTCAGGCTGGCTCCTCATAGGGATGCTGGGTGCTGCA +
Preference number: 1 (lower is better)
Translates to: QGCLGSLFLLLGSGF*LSSGWLLIGMLGAA
Trigger: TGCAGCACCCAGCATCCCTATGAGGAGCCAGCCTGAGGACAATCAGAAGCCTGAACCAAGAAGAAGGAACAGAGAACCAAGACATCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 90 bp CCCTCACTCCAGTGCTCAGCCCATTCTGAGGTCCTTAATCAAGATTaGATAAGAAGGAAGCTGATTGGCCATCCTGGTGGGGTCAGCTGT +
Preference number: 1 (lower is better)
Translates to: PSLQCSAHSEVLNQD*IRRKLIGHPGGVSC
Trigger: ACAGCTGACCCCACCAGGATGGCCAATCAGCTTCCTTCTTATGCAATCTTGATTAAGGACCTCAGAATGGGCTGAGCACTGGAGTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 90 bp TCAGGGAGACCTCTGGACCTACAAATAAATCTGGCATCGACACCATaGTTAGGACCACACAGCTCTGCTCTCCTTCCTAGGAGACCTTGG +
Preference number: 1 (lower is better)
Translates to: SGRPLDLQINLASTP*LGPHSSALLPRRPW
Trigger: CCAAGGTCTCCTAGGAAGGAGAGCAGAGCTGTGTGGTCCTAATCATGGTGTCGATGCCAGATTTATTTGTAGGTCCAGAGGTCTCCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR TCA 90 bp TGTGTGAAACTGCTCATTGTGGCTTTCCGGGGGCCTGGTTGTTTCTaGCTCACTTTGGGTCATAGTGTCCATCATCAGGTGAGCACTGAG +
Preference number: 1 (lower is better)
Translates to: CVKLLIVAFRGPGCF*LTLGHSVHHQVSTE
Trigger: CTCAGTGCTCACCTGATGATGGACACTATGACCCAAAGTGAGTCAGAAACAACCAGGCCCCCGGAAAGCCACAATGAGCAGTTTCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594943.1
3UTR TCA 90 bp TTCTTGGCCAGGCAAAAAGGTCACTGGAACTGCCCACCTTTCTCTTaGCAGACCTTTCTGTTCCCACCTCTTCCTGACTGGTCTCCCTTT +
Preference number: 1 (lower is better)
Translates to: FLARQKGHWNCPPFS*QTFLFPPLPDWSPF
Trigger: AAAGGGAGACCAGTCAGGAAGAGGTGGGAACAGAAAGGTCTGTCAAGAGAAAGGTGGGCAGTTCCAGTGACCTTTTTGCCTGGCCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 90 bp CTCAGGCACAATTGCATTGTCAAAAGGCAGTATCTGCCTCCCCTTTaGGCCCTGCACGGAAGTCAGCCCAAAGGAGACCTAGTTGATTCA +
Preference number: 1 (lower is better)
Translates to: LRHNCIVKRQYLPPL*ALHGSQPKGDLVDS
Trigger: TGAATCAACTAGGTCTCCTTTGGGCTGACTTCCGTGCAGGGCTCAAAGGGGAGGCAGATACTGCCTTTTGACAATGCAATTGTGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 90 bp TTCCCAGGGACAAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTaGAAAGAGGCCTTCCTCTTTCATGAATCCTCGTCAGCACAGACC +
Preference number: 1 (lower is better)
Translates to: FPGTSRRQMPSSYLN*KEAFLFHESSSAQT
Trigger: GGTCTGTGCTGACGAGGATTCATGAAAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTTGTCCCTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 90 bp CCAGTGACGCCATCAAGGATGTCTTGGTTCTCTGTTCCTTCTTCTTaGTTCAGGCTTCTGATTGTCCTCAGGCTGGCTCCTCATAGGGAT +
Preference number: 1 (lower is better)
Translates to: PVTPSRMSWFSVPSS*FRLLIVLRLAPHRD
Trigger: ATCCCTATGAGGAGCCAGCCTGAGGACAATCAGAAGCCTGAACCAAGAAGAAGGAACAGAGAACCAAGACATCCTTGATGGCGTCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 90 bp GGCCAATTACTGTTCTTACCTGGCCCCAGTAGGTCTTACAACCAGTaGCCTACCTACCAATTCAGTCCTTCAGTGCCCATGGCTACAATG +
Preference number: 1 (lower is better)
Translates to: GQLLFLPGPSRSYNQ*PTYQFSPSVPMATM
Trigger: CATTGTAGCCATGGGCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGCCAGGTAAGAACAGTAATTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR TCA 90 bp TGTTTACCAAGGCACATCCTGCACAGCCCTAACTCCATTAAACCTTaGGTCAATACAGCACATGTTTCTGTGAGCACAGGGTTGGGGCTA +
Preference number: 1 (lower is better)
Translates to: CLPRHILHSPNSIKP*VNTAHVSVSTGLGL
Trigger: TAGCCCCAACCCTGTGCTCACAGAAACATGTGCTGTATTGACTCAAGGTTTAATGGAGTTAGGGCTGTGCAGGATGTGCCTTGGTAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 90 bp CAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTaGCTCGAACAGTTCAGCAAGATGGAAGAGGACCCTCAACAGGCT +
Preference number: 1 (lower is better)
Translates to: QESRLLFLVKVGFCL*LEQFSKMEEDPQQA
Trigger: AGCCTGTTGAGGGTCCTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR GCA 90 bp TTTTACACCAAGACATTCCATTCCCAGGGACAAGCAGGAGACAGATaGCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTTCATG +
Preference number: 1 (lower is better)
Translates to: FYTKTFHSQGQAGDR*LPLISTAKRPSSFM
Trigger: CATGAAAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTTGTCCCTGGGAATGGAATGTCTTGGTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 90 bp CCTCCATGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTaGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGGA +
Preference number: 1 (lower is better)
Translates to: PPWATRIQIALLGQS*VLSLPRTVQQDGRG
Trigger: TCCTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCATGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CCA 90 bp CTAACTGGCACAACAGATCTGGGTGAATCACAAAAACCACATATCTaGAAGGCAAGGTGTATGTTCTCTCAAATCCTGCTTTCCTGCCCG +
Preference number: 1 (lower is better)
Translates to: LTGTTDLGESQKPHI*KARCMFSQILLSCP
Trigger: CGGGCAGGAAAGCAGGATTTGAGAGAACATACACCTTGCCTTCCAGATATGTGGTTTTTGTGATTCACCCAGATCTGTTGTGCCAGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR TCA 90 bp GAATTTGGTAAGCACAGTGGTCTGCATTCCTTGAGCACATGTGAGTaGCTGATGAAAACGGTGAGGATATGCCACATGGTAGTGTCTGTT +
Preference number: 1 (lower is better)
Translates to: EFGKHSGLHSLSTCE*LMKTVRICHMVVSV
Trigger: AACAGACACTACCATGTGGCATATCCTCACCGTTTTCATCAGTCACTCACATGTGCTCAAGGAATGCAGACCACTGTGCTTACCAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR GCA 90 bp ATAGCACTACCCTCCATGGCAGTTGTAGCCCAACAGTGGGATTTGTaGCTGTCTTTTATCTCCTTGGCTGCCATAATAAAATGTCATGGA +
Preference number: 1 (lower is better)
Translates to: IALPSMAVVAQQWDL*LSFISLAAIIKCHG
Trigger: TCCATGACATTTTATTATGGCAGCCAAGGAGATAAAAGACAGGCACAAATCCCACTGTTGGGCTACAACTGCCATGGAGGGTAGTGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 90 bp TGTAGACAGATAGCACTACCCTCCATGGCAGTTGTAGCCCAACAGTaGGATTTGTGCCTGTCTTTTATCTCCTTGGCTGCCATAATAAAA +
Preference number: 1 (lower is better)
Translates to: CRQIALPSMAVVAQQ*DLCLSFISLAAIIK
Trigger: TTTTATTATGGCAGCCAAGGAGATAAAAGACAGGCACAAATCCCACTGTTGGGCTACAACTGCCATGGAGGGTAGTGCTATCTGTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 90 bp GGTGTTTTTAGAGGGTACACAGGAATGTCCTCAAATGGCATGGTTTaGTACCCTGATAAAGCCATTCCTTTTACTTTCTCTGTCCAGCAC +
Preference number: 1 (lower is better)
Translates to: GVFRGYTGMSSNGMV*YPDKAIPFTFSVQH
Trigger: GTGCTGGACAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGGACATTCCTGTGTACCCTCTAAAAACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 90 bp AACAGTGCTGGGAAATATGAAGCATCACTGCAAATAAACAATTCATaGAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGG +
Preference number: 1 (lower is better)
Translates to: NSAGKYEASLQINNS*RSQHLSLSQMPLLR
Trigger: CCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCATGAATTGTTTATTTGCAGTGATGCTTCATATTTCCCAGCACTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CCA 90 bp CAGGAGGTGTTTTTAGAGGGTACACAGGAATGTCCTCAAATGGCATaGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGTCC +
Preference number: 1 (lower is better)
Translates to: QEVFLEGTQECPQMA*FDTLIKPFLLLSLS
Trigger: GGACAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGGACATTCCTGTGTACCCTCTAAAAACACCTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 90 bp TGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATaGAAGAGGACCCTCAACAGGCTTTTATTATATTATTCCCTTCAG +
Preference number: 1 (lower is better)
Translates to: WSKLGFVFASNSSAR*KRTLNRLLLYYSLQ
Trigger: CTGAAGGGAATAATATAATAAAAGCCTGTTGAGGGTCCTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR TCA 90 bp CAGTACATAAGTTATGAGTCCACAAAATCTTTAGATGCCTTATGCTaGCGATGTGTGTTGCTAAAGGAGAATCAAAGGTCTGAGGTCCTG +
Preference number: 1 (lower is better)
Translates to: QYISYESTKSLDALC*RCVLLKENQRSEVL
Trigger: CAGGACCTCAGACCTTTGATTCTCCTTTAGCAACACACATCGTCAGCATAAGGCATCTAAAGATTTTGTGGACTCATAACTTATGTACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR TCA 90 bp CGGGAAGTAATAAAGATAATTCCTAACTGGCACAACAGATCTGGGTaGATCACAAAAACCACATATCTGGAAGGCAAGGTGTATGTTCTC +
Preference number: 1 (lower is better)
Translates to: REVIKIIPNWHNRSG*ITKTTYLEGKVYVL
Trigger: GAGAACATACACCTTGCCTTCCAGATATGTGGTTTTTGTGATTCACCCAGATCTGTTGTGCCAGTTAGGAATTATCTTTATTACTTCCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 90 bp TTGTCCTCAGGCTGGCTCCTCATAGGGATGCTGGGTGCTGCAGCCTaGACTGGGGCAGCAGGCCCCCATGTTCAATCCATCCTCCCACCT +
Preference number: 2 (lower is better)
Translates to: LSSGWLLIGMLGAAA*TGAAGPHVQSILPP
Trigger: AGGTGGGAGGATGGATTGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATGAGGAGCCAGCCTGAGGACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR TCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCAGCTGGGATTACAGCATaGGCCACCATGTCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSAGITA*ATMSSL
Trigger: GAGGCTGGACATGGTGGCTCATGCTGTAATCCCAGC...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCACTTTGCCGTGTCCCATaGCTGTCAAAGTGTTGTGTG +
Preference number: 2 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSLCRVP*LSKCCV
Trigger: CACACAACACTTTGACAGCCATGGGACACGGCAAAG...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR TCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACGGCAGGAGGATCACTTaGGGCCAGGCACTCGAGACC +
Preference number: 2 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHGRRIT*GQALET
Trigger: GGTCTCGAGTGCCTGGCCTCAAGTGATCCTCCTGCC...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCATGTGTTCTTACAAGGTaGAGGGACAGAGGAGAGATC +
Preference number: 2 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSCVLTR*RDRGEI
Trigger: GATCTCTCCTCTGTCCCTCCACCTTGTAAGAACACA...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 90 bp CAGGCTTGTTCGGTGCCGCAGCCCAGTGACGCCATCAAGGATGTCTaGGTTCTCTGTTCCTTCTTCTTGGTTCAGGCTTCTGATTGTCCT +
Preference number: 2 (lower is better)
Translates to: QACSVPQPSDAIKDV*VLCSFFLVQASDCP
Trigger: AGGACAATCAGAAGCCTGAACCAAGAAGAAGGAACAGAGAACCAAGACATCCTTGATGGCGTCACTGGGCTGCGGCACCGAACAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR GCA 90 bp TGCCTTCTGGAGGAAGCAGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTTACTTTGGGAGCAGCTaGATTCATGTCTGGACCCTG +
Preference number: 2 (lower is better)
Translates to: CLLEEAAHLCRVPWLSKCYFGSS*IHVWTL
Trigger: CAGGGTCCAGACATGAATGCAGCTGCTCCCAAAGTA...ACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR TCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCTGGCATCGACACCATaGTTAGGACCACACAGCTCT +
Preference number: 2 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCLASTP*LGPHSS
Trigger: AGAGCTGTGTGGTCCTAATCATGGTGTCGATGCCAG...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR TCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACGTCTGGACCCTGTCATaGAGTCCTAGGCAAGATGGA +
Preference number: 2 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHVWTLS*SPRQDG
Trigger: TCCATCTTGCCTAGGACTTCATGACAGGGTCCAGAC...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR TCA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCGCAGGTCCCAGCACTTaGGTTTGTCACAAATGCCTC +
Preference number: 2 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLAAGPST*VCHKCL
Trigger: GAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGC...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR GCA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGTCCAGGCTTGTTCGGTaGCGCAGCCCAGTGACGCCA +
Preference number: 2 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLSRLVR*RSPVTP
Trigger: TGGCGTCACTGGGCTGCGGCACCGAACAAGCCTGGA...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCAACAGTTCAGCAAGATaGAAGAGGACCCTCAACAGG +
Preference number: 2 (lower is better)
Translates to: MQVPALEFVTNASSQGDLNSSAR*KRTLNR
Trigger: CCTGTTGAGGGTCCTCTTCCATCTTGCTGAACTGTT...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCTCATACTATGTCCCTaGGGGGACATAAAGTTGGAG +
Preference number: 2 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCLILCP*GDIKLE
Trigger: CTCCAACTTTATGTCCCCCCAGGGACATAGTATGAG...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CCA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTGTTTCTGACTCACTTTaGGTCATAGTGTCCATCATC +
Preference number: 2 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLVSDSL*VIVSII
Trigger: GATGATGGACACTATGACCCAAAGTGAGTCAGAAAC...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594943.1
3UTR-3UTR CCA 90 bp TGCCTTCTGGAGGAAGCAGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTGCATTTTGCTTACTTTaGGAGCAGCTGCATTCATGT +
Preference number: 2 (lower is better)
Translates to: CLLEEAAHLCRVPWLSKCAFCLL*EQLHSC
Trigger: ACATGAATGCAGCTGCTCCCAAAGTAAGCAAAATGC...ACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGTGCTGCAGCCTTGACTaGGGCAGCAGGCCCCCATGT +
Preference number: 2 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLCCSLD*GSRPPC
Trigger: ACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCA...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR TCA 90 bp TGCCTTCTGGAGGAAGCAGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTAAATTTGATTCCTATTaGGACCTCTCTTCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: CLLEEAAHLCRVPWLSKCKFDSY*DLSSWL
Trigger: AAGCCAGGAAGAGAGGTCTCAATAGGAATCAAATTT...ACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR GCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTAGATTTGTTAGAAAATaGCTCCTGGGGCCGGGTGCA +
Preference number: 2 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLRFVRK*LLGPGA
Trigger: TGCACCCGGCCCCAGGAGGCATTTTCTAACAAATCT...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGCTTCTTGGTCAAAGTTaGGTTTTGTCTTTGCCTCGA +
Preference number: 2 (lower is better)
Translates to: QVPALEFVTNASSQGDLWLLGQS*VLSLPR
Trigger: TCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAG...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CCA 90 bp TGCCTTCTGGAGGAAGCAGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTATTTTCTTATGCTTCTaGAGGCTGAGAAGTCCAAGA +
Preference number: 2 (lower is better)
Translates to: CLLEEAAHLCRVPWLSKCIFLCF*RLRSPR
Trigger: TCTTGGACTTCTCAGCCTCCAGAAGCATAAGAAAAT...ACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTGGAGGTCATGGGCAGTaGGTGTTGTGTAGACAGATA +
Preference number: 2 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLGGHGQ*VLCRQI
Trigger: TATCTGTCTACACAACACCCACTGCCCATGACCTCC...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 90 bp GCAGAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTaGGGTAATGTGGGAGAGGGAATATCCCACTATGGCAATCACATA +
Preference number: 2 (lower is better)
Translates to: AEHIHQHMVRQPISL*GNVGEGISHYGNHI
Trigger: TATGTGATTGCCATAGTGGGATATTCCCTCTCCCACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 90 bp TCACTCAGAGCAATGCCCTTGATTTTCAGGGCTCACATCAGCATTTaGCTTACTTTGGGAGCAGCTGCATTCATGTCTGGACCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: SLRAMPLIFRAHISI*LTLGAAAFMSGPCH
Trigger: ATGACAGGGTCCAGACATGAATGCAGCTGCTCCCAAAGTAAGCAAAATGCTGATGTGAGCCCTGAAAATCAAGGGCATTGCTCTGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR TCA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCTTGAGCACATGTGAGTaGCTGATGAAAACGGTGAGG +
Preference number: 2 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLALSTCE*LMKTVR
Trigger: CCTCACCGTTTTCATCAGTCACTCACATGTGCTCAA...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR TCA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGGGCACGAGAATCCCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKGTRIP*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGGGATTCTCGTGCC...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCGAAGGTAAACCTCCATaGGCTACAAGAATCCAGATT +
Preference number: 2 (lower is better)
Translates to: MQVPALEFVTNASSQGDLEGKPP*ATRIQI
Trigger: AATCTGGATTCTTGTAGCCCATGGAGGTTTACCTTC...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 90 bp ACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTaGCCTCGAACAGTTCAGCAAGATGGAAGAGGACCCTCAACAGGC +
Preference number: 2 (lower is better)
Translates to: TRIQIALLGQSWVLS*PRTVQQDGRGPSTG
Trigger: GCCTGTTGAGGGTCCTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTaGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGGACCCTCA +
Preference number: 2 (lower is better)
Translates to: WATRIQIALLGQSWV*SLPRTVQQDGRGPS
Trigger: TGAGGGTCCTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 90 bp ACCTCCATGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTaGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: TSMGYKNPDCSSWSK*GFVFASNSSARWKR
Trigger: CCTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCATGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR TCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTACATTGACTAGAGACTaGGTGACAGGTTCTGATCCT +
Preference number: 2 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLTLTRD*VTGSDP
Trigger: AGGATCAGAACCTGTCACTCAGTCTCTAGTCAATGT...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR GCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCAAATAAACAATTCATaGAGGTCCCAGCACTTGAGT +
Preference number: 2 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCQINNS*RSQHLS
Trigger: ACTCAAGTGCTGGGACCTGCATGAATTGTTTATTTG...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CCA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCTCACACCTACCTGTCTaGGCCAATTACTGTTCTTAC +
Preference number: 2 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLASHLPV*ANYCSY
Trigger: GTAAGAACAGTAATTGGCCCAGACAGGTAGGTGTGA...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CCA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGCCACCTGCTAGAGCATaGGCAGGAGCTGTGGATAGT +
Preference number: 2 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLPPARA*AGAVDS
Trigger: ACTATCCACAGCTCCTGCCCATGCTCTAGCAGGTGG...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp TTTTGCATGCCTGTAATCCCTGCTACTCGGGTGGCTGAGGCACGAGAATCCCTTAAGGCTCCACCCTTGTaGCCTCATTTAATTTTAATT +
Preference number: 2 (lower is better)
Translates to: FCMPVIPATRVAEARESLKAPPL*PHLILI
Trigger: AATTAAAATTAAATGAGGCCACAAGGGTGGAGCCTT...AAGGGATTCTCGTGCCTCAGCCACCCGAGTAGCAGGGATTACAGGCATGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTTGTCTGAAGGAATCCTaGGCTATGGTTCAGAATCTG +
Preference number: 2 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLCLKES*AMVQNL
Trigger: CAGATTCTGAACCATAGCCCAGGATTCCTTCAGACA...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 90 bp GCATCACTGCAAATAAACAATTCATGCAGGTCCCAGCACTTGAGTTaGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAAT +
Preference number: 2 (lower is better)
Translates to: ASLQINNSCRSQHLS*SQMPLLRETSGPTN
Trigger: ATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCATGAATTGTTTATTTGCAGTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 90 bp TATGAAGCATCACTGCAAATAAACAATTCATGCAGGTCCCAGCACTaGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCT +
Preference number: 2 (lower is better)
Translates to: YEASLQINNSCRSQH*SLSQMPLLRETSGP
Trigger: AGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCATGAATTGTTTATTTGCAGTGATGCTTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 90 bp CAGATAGCACTACCCTCCATGGCAGTTGTAGCCCAACAGTGGGATTaGTGCCTGTCTTTTATCTCCTTGGCTGCCATAATAAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: QIALPSMAVVAQQWD*CLSFISLAAIIKCH
Trigger: ATGACATTTTATTATGGCAGCCAAGGAGATAAAAGACAGGCACAAATCCCACTGTTGGGCTACAACTGCCATGGAGGGTAGTGCTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR TCA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATATTGAGCACATGTGAGTaGCTGATGAAAACGGTGAGG +
Preference number: 2 (lower is better)
Translates to: QFSPSVPMATMKDLGNKILSTCE*LMKTVR
Trigger: CCTCACCGTTTTCATCAGTCACTCACATGTGCTCAA...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR TCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGGGTGCCGCAGCCCAGTaGCGCCATCAAGGATGTCTT +
Preference number: 2 (lower is better)
Translates to: KNEGNLGINKQDVITYCGGAAAQ*RHQGCL
Trigger: AAGACATCCTTGATGGCGTCACTGGGCTGCGGCACC...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR GCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCTACAAGAATCCAGATTaGTCTTCTTGGTCAAAGTTG +
Preference number: 2 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCYKNPD*SSWSKL
Trigger: CAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTA...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR GCA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGCCTCTCTTCCTGGCTTaGAGATGGCTGACTTGCTGT +
Preference number: 2 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLPLFLA*RWLTCC
Trigger: ACAGCAAGTCAGCCATCTGCAAGCCAGGAAGAGAGG...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGCCAGATTGCTCTTCTTaGTCAAAGTTGGGTTTTGTC +
Preference number: 2 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVPDCSS*SKLGFV
Trigger: GACAAAACCCAACTTTGACCAAGAAGAGCAATCTGG...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAAGTTCACCCTTCACACTaGCAGAGCACATACATCAGC +
Preference number: 2 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKVHPSH*QSTYIS
Trigger: GCTGATGTATGTGCTCTGCCAGTGTGAAGGGTGAAC...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGCTTCCTAGGAGACCTTaGAAACCAATAAAAATTAAG +
Preference number: 2 (lower is better)
Translates to: QVPALEFVTNASSQGDLWLPRRP*KPIKIK
Trigger: CTTAATTTTTATTGGTTTCCAAGGTCTCCTAGGAAG...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 90 bp AAGAAGGTAAACCTCCATGGGCTACAAGAATCCAGATTGCTCTTCTaGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAG +
Preference number: 2 (lower is better)
Translates to: KKVNLHGLQESRLLF*VKVGFCLCLEQFSK
Trigger: CTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCATGGAGGTTTACCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR GCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCTTTCAACTAGTGATATaGAGATGTATGAGGGTGAAT +
Preference number: 2 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCFQLVI*RCMRVN
Trigger: ATTCACCCTCATACATCTGCATATCACTAGTTGAAA...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAAAACAGTTCAGCAAGATaGAAGAGGACCCTCAACAGG +
Preference number: 2 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKNSSAR*KRTLNR
Trigger: CCTGTTGAGGGTCCTCTTCCATCTTGCTGAACTGTT...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 90 bp AAACCTATGAAGAAGGTAAACCTCCATGGGCTACAAGAATCCAGATaGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAG +
Preference number: 2 (lower is better)
Translates to: KPMKKVNLHGLQESR*LFLVKVGFCLCLEQ
Trigger: CTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCATGGAGGTTTACCTTCTTCATAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 90 bp CCAAACCATGAAGCCATAGTAACACAGACATATCTGGATGCACCTTaGGATGGGACACATTCACTCTTCTTGGCCACAATCTTTTCTACT +
Preference number: 2 (lower is better)
Translates to: PNHEAIVTQTYLDAP*DGTHSLFLATIFST
Trigger: AGTAGAAAAGATTGTGGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGTTACTATGGCTTCATGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 90 bp GCAGTTGTAGCCCAACAGTGGGATTTGTGCCTGTCTTTTATCTCCTaGGCTGCCATAATAAAATGTCATGGATTGGGTGGTTTAAACAAC +
Preference number: 2 (lower is better)
Translates to: AVVAQQWDLCLSFIS*AAIIKCHGLGGLNN
Trigger: GTTGTTTAAACCACCCAATCCATGACATTTTATTATGGCAGCCAAGGAGATAAAAGACAGGCACAAATCCCACTGTTGGGCTACAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 90 bp AGAATCTGCCAGTCGATGTTTCTGTGGATCCTTGTACCTCAGTCATaGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCT +
Preference number: 2 (lower is better)
Translates to: RICQSMFLWILVPQS*VFYTESSCLLLTTS
Trigger: AGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAATGACTGAGGTACAAGGATCCACAGAAACATCGACTGGCAGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR TCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAATTCCTTGAGCACATGTaGGTGACTGATGAAAACGGT +
Preference number: 2 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKFLEHM*VTDENG
Trigger: ACCGTTTTCATCAGTCACTCACATGTGCTCAAGGAA...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR TCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTTTGTTTTCTGATGCTTaGTATCCATGCTCTGTTGAT +
Preference number: 2 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLLFSDA*YPCSVD
Trigger: ATCAACAGAGCATGGATATCAAGCATCAGAAAACAA...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR GCA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAAAACGGTGAGGATATaGCACATGGTAGTGTCTGTT +
Preference number: 2 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFKTVRI*HMVVSV
Trigger: AACAGACACTACCATGTGGCATATCCTCACCGTTTT...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR GCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAAGTTGGGTTTTGTCTTTaGCTCGAACAGTTCAGCAAG +
Preference number: 2 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKVGFCL*LEQFSK
Trigger: CTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAAC...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR GCA 90 bp CTCACTTTGGGTCATAGTGTCCATCATCAGGTGAGCACTGAGCCACACAATTATGACACAGGTACCTTTTaGTGTGAACAGGAATCTTTA +
Preference number: 2 (lower is better)
Translates to: LTLGHSVHHQVSTEPHNYDTGTF*CEQESL
Trigger: TAAAGATTCCTGTTCACAGCAAAAGGTACCTGTGTC...ATAATTGTGTGGCTCAGTGCTCACCTGATGATGGACACTATGACCCAAAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594943.1
3UTR-3UTR GCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGGAAGCAGCACACCTTTaGCGTGTCCCATGGCTGTCA +
Preference number: 2 (lower is better)
Translates to: KNEGNLGINKQDVITYCGEAAHL*RVPWLS
Trigger: TGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTC...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATACTTCTTGGTCAAAGTTaGGTTTTGTCTTTGCCTCGA +
Preference number: 2 (lower is better)
Translates to: QFSPSVPMATMKDLGNKILLGQS*VLSLPR
Trigger: TCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAG...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGGAGAAGCCTGAGGTGTaGTTGGCTCCAGGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: KNEGNLGINKQDVITYCGEKPEV*LAPGLF
Trigger: GAACAAGCCTGGAGCCAACCACACCTCAGGCTTCTC...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR TCA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGAAAGTGTTGTGTGCCTaGACAACGTTGGCTTCCATA +
Preference number: 2 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLKVLCA*TTLASI
Trigger: TATGGAAGCCAACGTTGTTCAGGCACACAACACTTT...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR GCA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCTTTCAACTAGTGATATaGAGATGTATGAGGGTGAAT +
Preference number: 2 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLAFQLVI*RCMRVN
Trigger: ATTCACCCTCATACATCTGCATATCACTAGTTGAAA...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR GCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAAAAAACGGTGAGGATATaGCACATGGTAGTGTCTGTT +
Preference number: 2 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKKTVRI*HMVVSV
Trigger: AACAGACACTACCATGTGGCATATCCTCACCGTTTT...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR GCA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATACAAATAAACAATTCATaGAGGTCCCAGCACTTGAGT +
Preference number: 2 (lower is better)
Translates to: QFSPSVPMATMKDLGNKIQINNS*RSQHLS
Trigger: ACTCAAGTGCTGGGACCTGCATGAATTGTTTATTTG...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR GCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTTCCATTCTTTTAATATaGCAGAGTACTTACTCTCTG +
Preference number: 2 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLSILLI*QSTYSL
Trigger: CAGAGAGTAAGTACTCTGGCATATTAAAAGAATGGA...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCGAAAAATCAGCTCTCTaGTGTCCTACAGTGAATAAG +
Preference number: 2 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFEKSAL*CPTVNK
Trigger: CTTATTCACTGTAGGACACCAGAGAGCTGATTTTTC...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGCACCAGCTGGTCATGTaGAGTCATGGCAGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: KNEGNLGINKQDVITYCGHQLVM*SHGSLQ
Trigger: CTGAAGACTGCCATGACTCCACATGACCAGCTGGTG...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGGTTGTAGCCCAACAGTaGGATTTGTGCCTGTCTTTT +
Preference number: 2 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLVVAQQ*DLCLSF
Trigger: AAAAGACAGGCACAAATCCCACTGTTGGGCTACAAC...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR TCA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGGCTTTCTTTTCACAATaGGAATCCAGCTTTGGTCAC +
Preference number: 2 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKAFFSQ*ESSFGH
Trigger: GTGACCAAAGCTGGATTCTCATTGTGAAAAGAAAGC...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR TCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGTCAGAGCAATGCCCTTaGTTTTCAGGGCTCACATCA +
Preference number: 2 (lower is better)
Translates to: KNEGNLGINKQDVITYCGSEQCP*FSGLTS
Trigger: TGATGTGAGCCCTGAAAATCAAGGGCATTGCTCTGA...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGTTCCTGGCTTGCAGATaGCTGACTTGCTGTGTTCTT +
Preference number: 2 (lower is better)
Translates to: KNEGNLGINKQDVITYCGFLACR*LTCCVL
Trigger: AAGAACACAGCAAGTCAGCCATCTGCAAGCCAGGAA...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 72 bp GTCCTCAGGCTGGCTCCTCATAGGGATGCTGGGTGCTaGAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCA +
Preference number: 3 (lower is better)
Translates to: VLRLAPHRDAGC*SLDWGSRPPCS
Trigger: TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATGAGGAGCCAGCCTGAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 72 bp ATTGTCCTCAGGCTGGCTCCTCATAGGGATGCTGGGTaGTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGT +
Preference number: 3 (lower is better)
Translates to: IVLRLAPHRDAG*CSLDWGSRPPC
Trigger: ACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATGAGGAGCCAGCCTGAGGACAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 72 bp GCTCCTCATAGGGATGCTGGGTGCTGCAGCCTTGACTaGGGCAGCAGGCCCCCATGTTCAATCCATCCTCCC +
Preference number: 3 (lower is better)
Translates to: APHRDAGCCSLD*GSRPPCSIHPP
Trigger: GGGAGGATGGATTGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATGAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 72 bp TCACTAACTCGCCTGATGAGAAGCCTGAGGTGTGGTTaGCTCCAGGCTTGTTCGGTGCCGCAGCCCAGTGAC +
Preference number: 3 (lower is better)
Translates to: SLTRLMRSLRCG*LQACSVPQPSD
Trigger: GTCACTGGGCTGCGGCACCGAACAAGCCTGGAGCCAACCACACCTCAGGCTTCTCATCAGGCGAGTTAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 72 bp GCTGTGGCCACAGCCCTATTAAGCAGGGGCCATGGGTaGTGGGCTGTTCTTAGAGAAAGGGGTGAGTCAGGC +
Preference number: 3 (lower is better)
Translates to: AVATALLSRGHG*WAVLRERGESG
Trigger: GCCTGACTCACCCCTTTCTCTAAGAACAGCCCATCACCCATGGCCCCTGCTTAATAGGGCTGTGGCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 72 bp TCCCTTCCCACGAGGCCACATCTCAGGCTGTCTCAGTaGGGGGAAACCTTGGACAATACCCAGGCTTTCTCG +
Preference number: 3 (lower is better)
Translates to: SLPTRPHLRLSQ*GETLDNTQAFS
Trigger: CGAGAAAGCCTGGGTATTGTCCAAGGTTTCCCCCCACTGAGACAGCCTGAGATGTGGCCTCGTGGGAAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CAA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCATCATTTGGTTTGAGGTaGGAATCACGCATCCCCAAG +
Preference number: 3 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSSFGLR*ESRIPK
Trigger: CTTGGGGATGCGTGATTCCAACCTCAAACCAAATGA...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 72 bp AAATTCACTAACTCGCCTGATGAGAAGCCTGAGGTGTaGTTGGCTCCAGGCTTGTTCGGTGCCGCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: KFTNSPDEKPEV*LAPGLFGAAAQ
Trigger: CTGGGCTGCGGCACCGAACAAGCCTGGAGCCAACCACACCTCAGGCTTCTCATCAGGCGAGTTAGTGAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CAA 90 bp TGCCTTCTGGAGGAAGCAGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTACCTCTCTTCCTGGCTaGCAGATGGCTGACTTGCTG +
Preference number: 3 (lower is better)
Translates to: CLLEEAAHLCRVPWLSKCTSLPG*QMADLL
Trigger: CAGCAAGTCAGCCATCTGCAAGCCAGGAAGAGAGGT...ACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CAA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCAAATGAGAATCCAGCTTaGGTCACCTGCCTAATGAAG +
Preference number: 3 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSNENPA*VTCLMK
Trigger: CTTCATTAGGCAGGTGACCAAAGCTGGATTCTCATT...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 72 bp CGGTGCCGCAGCCCAGTGACGCCATCAAGGATGTCTTaGTTCTCTGTTCCTTCTTCTTGGTTCAGGCTTCTG +
Preference number: 3 (lower is better)
Translates to: RCRSPVTPSRMS*FSVPSSWFRLL
Trigger: CAGAAGCCTGAACCAAGAAGAAGGAACAGAGAACCAAGACATCCTTGATGGCGTCACTGGGCTGCGGCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 72 bp TTGCCGTGTCCCATGGCTGTCAAAGTGTTGTGTGCCTaGACAACGTTGGCTTCCATAGACGGAGGTCATGGG +
Preference number: 3 (lower is better)
Translates to: LPCPMAVKVLCA*TTLASIDGGHG
Trigger: CCCATGACCTCCGTCTATGGAAGCCAACGTTGTTCAGGCACACAACACTTTGACAGCCATGGGACACGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 72 bp AGGGAGCTCAGCTCTTGGGAGAGCCAAAGGATCATCTaGTTCACCTTTCCCACAGCCCTGTCCCAGAACTCA +
Preference number: 3 (lower is better)
Translates to: RELSSWESQRII*FTFPTALSQNS
Trigger: TGAGTTCTGGGACAGGGCTGTGGGAAAGGTGAATCAGATGATCCTTTGGCTCTCCCAAGAGCTGAGCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 72 bp CTCTCAGGCACAATTGCATTGTCAAAAGGCAGTATCTaGCTCCCCTTTGAGCCCTGCACGGAAGTCAGCCCA +
Preference number: 3 (lower is better)
Translates to: LSGTIALSKGSI*LPFEPCTEVSP
Trigger: TGGGCTGACTTCCGTGCAGGGCTCAAAGGGGAGGCAGATACTGCCTTTTGACAATGCAATTGTGCCTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 72 bp CTTCTGGAGGAAGCAGCACACCTTTGCCGTGTCCCATaGCTGTCAAAGTGTTGTGTGCCTGAACAACGTTGG +
Preference number: 3 (lower is better)
Translates to: LLEEAAHLCRVP*LSKCCVPEQRW
Trigger: CCAACGTTGTTCAGGCACACAACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 72 bp ACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTTGTGTaGCTGAACAACGTTGGCTTCCATAGACGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: TFAVSHGCQSVV*LNNVGFHRRRS
Trigger: TGACCTCCGTCTATGGAAGCCAACGTTGTTCAGGCACACAACACTTTGACAGCCATGGGACACGGCAAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 72 bp ACAACGTTGGCTTCCATAGACGGAGGTCATGGGCAGTaGGTGTTGTGTAGACAGATAGCACTACCCTCCATG +
Preference number: 3 (lower is better)
Translates to: TTLASIDGGHGQ*VLCRQIALPSM
Trigger: CATGGAGGGTAGTGCTATCTGTCTACACAACACCCACTGCCCATGACCTCCGTCTATGGAAGCCAACGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CAA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACCTGACTGGTCTCCCTTaGTCTGCATCAGAGATTGTC +
Preference number: 3 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHLTGLP*SASEIV
Trigger: GACAATCTCTGATGCAGACAAAGGGAGACCAGTCAG...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 72 bp AGCCCTGCACGGAAGTCAGCCCAAAGGAGACCTAGTTaGTTCAGACCTGGATCTCTCTGCACATTGACTAGA +
Preference number: 3 (lower is better)
Translates to: SPARKSAQRRPS*FRPGSLCTLTR
Trigger: TCTAGTCAATGTGCAGAGAGATCCAGGTCTGAATCAACTAGGTCTCCTTTGGGCTGACTTCCGTGCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 72 bp AATTGCATTGTCAAAAGGCAGTATCTGCCTCCCCTTTaGGCCCTGCACGGAAGTCAGCCCAAAGGAGACCTA +
Preference number: 3 (lower is better)
Translates to: NCIVKRQYLPPL*ALHGSQPKGDL
Trigger: TAGGTCTCCTTTGGGCTGACTTCCGTGCAGGGCTCAAAGGGGAGGCAGATACTGCCTTTTGACAATGCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 72 bp GAAAGAAAATGCCTTCTGGAGGAAGCAGCACACCTTTaGCGTGTCCCATGGCTGTCAAAGTGTTGTGTGCCT +
Preference number: 3 (lower is better)
Translates to: ERKCLLEEAAHL*RVPWLSKCCVP
Trigger: AGGCACACAACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCATTTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 72 bp ATAGCACTACCCTCCATGGCAGTTGTAGCCCAACAGTaGGATTTGTGCCTGTCTTTTATCTCCTTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: IALPSMAVVAQQ*DLCLSFISLAA
Trigger: GGCAGCCAAGGAGATAAAAGACAGGCACAAATCCCACTGTTGGGCTACAACTGCCATGGAGGGTAGTGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 72 bp TTGATCACTATCTCTACCATCTCCATGAGGGGGATGTaGCAGGACTATAGGGTAATGAGTGGGGAGAGGGTC +
Preference number: 3 (lower is better)
Translates to: LITISTISMRGM*QDYRVMSGERV
Trigger: GACCCTCTCCCCACTCATTACCCTATAGTCCTGCCACATCCCCCTCATGGAGATGGTAGAGATAGTGATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CAA 90 bp GGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCCATGGCTATGCAGGTCCCAGCACTaGAGTTTGTCACAAATGCCT +
Preference number: 3 (lower is better)
Translates to: GLTTSDLPTNSVLQCPWLCRSQH*SLSQMP
Trigger: AGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCA...TAGCCATGGGCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CAA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACTTGCAGATGGCTGACTaGCTGTGTTCTTACAAGGTG +
Preference number: 3 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHLQMAD*LCSYKV
Trigger: CACCTTGTAAGAACACAGCAAGTCAGCCATCTGCAA...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 72 bp CCTCTGGACCTACAAATAAATCTGGCATCGACACCATaGTTAGGACCACACAGCTCTGCTCTCCTTCCTAGG +
Preference number: 3 (lower is better)
Translates to: PLDLQINLASTP*LGPHSSALLPR
Trigger: CCTAGGAAGGAGAGCAGAGCTGTGTGGTCCTAATCATGGTGTCGATGCCAGATTTATTTGTAGGTCCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR GCA 72 bp CAGTGCTCAGCCCATTCTGAGGTCCTTAATCAAGATTaGATAAGAAGGAAGCTGATTGGCCATCCTGGTGGG +
Preference number: 3 (lower is better)
Translates to: QCSAHSEVLNQD*IRRKLIGHPGG
Trigger: CCCACCAGGATGGCCAATCAGCTTCCTTCTTATGCAATCTTGATTAAGGACCTCAGAATGGGCTGAGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 72 bp CCATCAAGGATGTCTTGGTTCTCTGTTCCTTCTTCTTaGTTCAGGCTTCTGATTGTCCTCAGGCTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: PSRMSWFSVPSS*FRLLIVLRLAP
Trigger: AGGAGCCAGCCTGAGGACAATCAGAAGCCTGAACCAAGAAGAAGGAACAGAGAACCAAGACATCCTTGATGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CAA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACAGCATTTTGCTTACTTaGGGAGCAGCTGCATTCATG +
Preference number: 3 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHSILLT*GAAAFM
Trigger: CATGAATGCAGCTGCTCCCAAAGTAAGCAAAATGCT...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CAA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACTCAGGCACAATTGCATaGTCAAAAGGCAGTATCTGC +
Preference number: 3 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHSGTIA*SKGSIC
Trigger: GCAGATACTGCCTTTTGACAATGCAATTGTGCCTGA...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 72 bp AGGCACATCCTGCACAGCCCTAACTCCATTAAACCTTaGGTCAATACAGCACATGTTTCTGTGAGCACAGGG +
Preference number: 3 (lower is better)
Translates to: RHILHSPNSIKP*VNTAHVSVSTG
Trigger: CCCTGTGCTCACAGAAACATGTGCTGTATTGACTCAAGGTTTAATGGAGTTAGGGCTGTGCAGGATGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CAA 90 bp TGCCTTCTGGAGGAAGCAGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTCTGTCTTTTATCTCCTaGGCTGCCATAATAAAATGT +
Preference number: 3 (lower is better)
Translates to: CLLEEAAHLCRVPWLSKCLSFIS*AAIIKC
Trigger: ACATTTTATTATGGCAGCCAAGGAGATAAAAGACAG...ACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CAA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGAAGCCTGAGGTGTGGTaGGCTCCAGGCTTGTTCGGT +
Preference number: 3 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLKPEVW*APGLFG
Trigger: ACCGAACAAGCCTGGAGCCAACCACACCTCAGGCTT...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CAA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCGGTCAAAGTTGGGTTTaGTCTTTGCCTCGAACAGTT +
Preference number: 3 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLAGQSWV*SLPRTV
Trigger: AACTGTTCGAGGCAAAGACAAAACCCAACTTTGACC...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CAA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACTTTGTTTCATTTGGTTaGAGGTTGGAATCACGCATC +
Preference number: 3 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHFVSFG*RLESRI
Trigger: GATGCGTGATTCCAACCTCAAACCAAATGAAACAAA...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 72 bp AAGCACAGTGGTCTGCATTCCTTGAGCACATGTGAGTaGCTGATGAAAACGGTGAGGATATGCCACATGGTA +
Preference number: 3 (lower is better)
Translates to: KHSGLHSLSTCE*LMKTVRICHMV
Trigger: TACCATGTGGCATATCCTCACCGTTTTCATCAGTCACTCACATGTGCTCAAGGAATGCAGACCACTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR TCA 72 bp CCTACCAATTCAGTCCTTCAGTGCCCATGGCTACAATaGAGGACCTGGGAAATAAGATACCATGAACAGTGC +
Preference number: 3 (lower is better)
Translates to: PTNSVLQCPWLQ*RTWEIRYHEQC
Trigger: GCACTGTTCATGGTATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTGGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR TCA 72 bp AGGCTGAGAAGTCCAAGATCAAGGTGTCGGCAAATTTaGTTCCTATTGAGACCTCTCTTCCTGGCTTGCAGA +
Preference number: 3 (lower is better)
Translates to: RLRSPRSRCRQI*FLLRPLFLACR
Trigger: TCTGCAAGCCAGGAAGAGAGGTCTCAATAGGAATCAAATTTGCCGACACCTTGATCTTGGACTTCTCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 72 bp TTCAGACCTGGATCTCTCTGCACATTGACTAGAGACTaGGTGACAGGTTCTGATCCTATGCGACAACACAAG +
Preference number: 3 (lower is better)
Translates to: FRPGSLCTLTRD*VTGSDPMRQHK
Trigger: CTTGTGTTGTCGCATAGGATCAGAACCTGTCACTCAGTCTCTAGTCAATGTGCAGAGAGATCCAGGTCTGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 72 bp ACAAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTaGAAAGAGGCCTTCCTCTTTCATGAATCCTCGTCA +
Preference number: 3 (lower is better)
Translates to: TSRRQMPSSYLN*KEAFLFHESSS
Trigger: TGACGAGGATTCATGAAAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CAA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATATCCCAGCACTTGAGTTaGTCACAAATGCCTCTTCTC +
Preference number: 3 (lower is better)
Translates to: QFSPSVPMATMKDLGNKISQHLS*SQMPLL
Trigger: GAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGA...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CAA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGGTTCCCAAACCAGAGTaGGTCCACCTGCTAGAGCAT +
Preference number: 3 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLVPKPE*VHLLEH
Trigger: ATGCTCTAGCAGGTGGACCAACTCTGGTTTGGGAAC...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CAA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACAAGAAGTTATTAGAATaGATGGCACACTCTGAGTTC +
Preference number: 3 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHKKLLE*MAHSEF
Trigger: GAACTCAGAGTGTGCCATCAATTCTAATAACTTCTT...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 72 bp AGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTaGCTCGAACAGTTCAGCAAGATGGAAGAGGACCCT +
Preference number: 3 (lower is better)
Translates to: RLLFLVKVGFCL*LEQFSKMEEDP
Trigger: AGGGTCCTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CCA 72 bp ACCTCCATGGGCTACAAGAATCCAGATTGCTCTTCTTaGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGT +
Preference number: 3 (lower is better)
Translates to: TSMGYKNPDCSS*SKLGFVFASNS
Trigger: ACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCATGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CAA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGGTGAATTTCTGTCTGTaGGATCCCTTGAAAAATCAG +
Preference number: 3 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVVNFCL*DPLKNQ
Trigger: CTGATTTTTCAAGGGATCCAACAGACAGAAATTCAC...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CAA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCTATTCCCTTCAGAATTaGGTAAGCACAGTGGTCTGC +
Preference number: 3 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFYSLQN*VSTVVC
Trigger: GCAGACCACTGTGCTTACCAAATTCTGAAGGGAATA...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CAA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATAAGTTGGGTTTTGTCTTaGCCTCGAACAGTTCAGCAA +
Preference number: 3 (lower is better)
Translates to: QFSPSVPMATMKDLGNKISWVLS*PRTVQQ
Trigger: TTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACT...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CAA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGCATGGGCAGTGGGTGTaGTGTAGACAGATAGCACTA +
Preference number: 3 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKHGQWV*CRQIAL
Trigger: TAGTGCTATCTGTCTACACAACACCCACTGCCCATG...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR-3UTR CAA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATATCCAGATTGCTCTTCTaGGTCAAAGTTGGGTTTTGT +
Preference number: 3 (lower is better)
Translates to: QFSPSVPMATMKDLGNKISRLLF*VKVGFC
Trigger: ACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CAA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGGCCATCAAGGATGTCTaGGTTCTCTGTTCCTTCTTC +
Preference number: 3 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKAIKDV*VLCSFF
Trigger: GAAGAAGGAACAGAGAACCAAGACATCCTTGATGGC...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 72 bp GCCAGATTTATGTTTGACTTTACCCAAACATCTCAGTaGAGTAAAGAGCAGTATTGCCGCCAGCATGTCTTA +
Preference number: 3 (lower is better)
Translates to: ARFMFDFTQTSQ*SKEQYCRQHVL
Trigger: TAAGACATGCTGGCGGCAATACTGCTCTTTACTGCACTGAGATGTTTGGGTAAAGTCAAACATAAATCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 72 bp GCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTaGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGAT +
Preference number: 3 (lower is better)
Translates to: ATRIQIALLGQS*VLSLPRTVQQD
Trigger: ATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CAA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGAAGCTTCCCAAGTACTaGGACCTTGTAGTGAATCTT +
Preference number: 3 (lower is better)
Translates to: WATRIQIALLGQSWVLSLKLPKY*DLVVNL
Trigger: AAGATTCACTACAAGGTCCAAGTACTTGGGAAGCTT...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR TCA 72 bp ATGGCTACAATGAAGGACCTGGGAAATAAGATACCATaGACAGTGCTGGGAAATATGAAGCATCACTGCAAA +
Preference number: 3 (lower is better)
Translates to: MATMKDLGNKIP*TVLGNMKHHCK
Trigger: TTTGCAGTGATGCTTCATATTTCCCAGCACTGTTCATGGTATCTTATTTCCCAGGTCCTTCATTGTAGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR TCA 72 bp AGAGGGTACACAGGAATGTCCTCAAATGGCATGGTTTaGTACCCTGATAAAGCCATTCCTTTTACTTTCTCT +
Preference number: 3 (lower is better)
Translates to: RGYTGMSSNGMV*YPDKAIPFTFS
Trigger: AGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGGACATTCCTGTGTACCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 72 bp ACAACAGATCTGGGTGAATCACAAAAACCACATATCTaGAAGGCAAGGTGTATGTTCTCTCAAATCCTGCTT +
Preference number: 3 (lower is better)
Translates to: TTDLGESQKPHI*KARCMFSQILL
Trigger: AAGCAGGATTTGAGAGAACATACACCTTGCCTTCCAGATATGTGGTTTTTGTGATTCACCCAGATCTGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CAA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGGTGAATTTCTGTCTGTaGGATCCCTTGAAAAATCAG +
Preference number: 3 (lower is better)
Translates to: WATRIQIALLGQSWVLSLVNFCL*DPLKNQ
Trigger: CTGATTTTTCAAGGGATCCAACAGACAGAAATTCAC...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR-3UTR CAA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGCCTATTCTATTTCTTTaGCTATCAACAGGGCATCGG +
Preference number: 3 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKPILFL*LSTGHR
Trigger: CCGATGCCCTGTTGATAGCAAAAGAAATAGAATAGG...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 72 bp AACAACGAGAGTTTATTTTCTTATGCTTCTGGAGGCTaGGAAGTCCAAGATCAAGGTGTCGGCAAATTTGAT +
Preference number: 3 (lower is better)
Translates to: NNESLFSYASGG*EVQDQGVGKFD
Trigger: ATCAAATTTGCCGACACCTTGATCTTGGACTTCTCAGCCTCCAGAAGCATAAGAAAATAAACTCTCGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR TCA 72 bp CAGGATAAAGAAGTTATTAGAATTGATGGCACACTCTaGGTTCAGTTGGGAAGGTGGACATCAATCCATAGA +
Preference number: 3 (lower is better)
Translates to: QDKEVIRIDGTL*VQLGRWTSIHR
Trigger: TCTATGGATTGATGTCCACCTTCCCAACTGAACTCAGAGTGTGCCATCAATTCTAATAACTTCTTTATCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CCA 72 bp TTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATaGAAGAGGACCCTCAACAGGCTTTTATTATATTAT +
Preference number: 3 (lower is better)
Translates to: LGFVFASNSSAR*KRTLNRLLLYY
Trigger: ATAATATAATAAAAGCCTGTTGAGGGTCCTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR TCA 72 bp AGTTATGAGTCCACAAAATCTTTAGATGCCTTATGCTaGCGATGTGTGTTGCTAAAGGAGAATCAAAGGTCT +
Preference number: 3 (lower is better)
Translates to: SYESTKSLDALC*RCVLLKENQRS
Trigger: AGACCTTTGATTCTCCTTTAGCAACACACATCGTCAGCATAAGGCATCTAAAGATTTTGTGGACTCATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CCA 72 bp TTTTTAGAGGGTACACAGGAATGTCCTCAAATGGCATaGTTTGATACCCTGATAAAGCCATTCCTTTTACTT +
Preference number: 3 (lower is better)
Translates to: FLEGTQECPQMA*FDTLIKPFLLL
Trigger: AAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGGACATTCCTGTGTACCCTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR GCA 72 bp CTTTCTTTTCACAATGAGAATCCAGCTTTGGTCACCTaGCTAATGAAGACTCTTGCATTACCAATTTATTTC +
Preference number: 3 (lower is better)
Translates to: LSFHNENPALVT*LMKTLALPIYF
Trigger: GAAATAAATTGGTAATGCAAGAGTCTTCATTAGGCAGGTGACCAAAGCTGGATTCTCATTGTGAAAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCATGGGTGCTGCAGCCTTaGCTGGGGCAGCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSWVLQP*LGQQAP
Trigger: GGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCA...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCATCCAGGCTTGTTCGGTaGCGCAGCCCAGTGACGCCA +
Preference number: 4 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSSRLVR*RSPVTP
Trigger: TGGCGTCACTGGGCTGCGGCACCGAACAAGCCTGGA...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTCCGGCGTGCGTGCGGTaGCAAATCGCTGGGCGACGC +
Preference number: 4 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLPACVR*QIAGRR
Trigger: GCGTCGCCCAGCGATTTGCCACCGCACGCACGCCGG...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594943.1
ENST00000602149.1
CDS-3UTR CCA 90 bp TGCCTTCTGGAGGAAGCAGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTGCGCTGCCTCGGCCATaGGACTTTAGGCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: CLLEEAAHLCRVPWLSKCALPRP*DFRRGG
Trigger: CCCGCCCCGCCTAAAGTCCCATGGCCGAGGCAGCGC...ACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCAGATTGGCCATCCTGGTaGGGTCAGCTGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSDWPSW*GQLWPQ
Trigger: CTGTGGCCACAGCTGACCCCACCAGGATGGCCAATC...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 72 bp GGCTGGCTCCTCATAGGGATGCTGGGTGCTGCAGCCTaGACTGGGGCAGCAGGCCCCCATGTTCAATCCATC +
Preference number: 4 (lower is better)
Translates to: GWLLIGMLGAAA*TGAAGPHVQSI
Trigger: GATGGATTGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATGAGGAGCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCCGGCGTGCGTGCGGTaGCAAATCGCTGGGCGACGC +
Preference number: 4 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCPACVR*QIAGRR
Trigger: GCGTCGCCCAGCGATTTGCCACCGCACGCACGCCGG...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCCCGGCGTGCGTGCGGTaGCAAATCGCTGGGCGACGC +
Preference number: 4 (lower is better)
Translates to: MQVPALEFVTNASSQGDLPACVR*QIAGRR
Trigger: GCGTCGCCCAGCGATTTGCCACCGCACGCACGCCGG...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CTTTCCGGGGGCCTGGTTGTTTCTGACTCACTTTGGGTCATAGTGTCCATCATCCCGGCGTGCGTGCGGTaGCAAATCGCTGGGCGACGC +
Preference number: 4 (lower is better)
Translates to: LSGGLVVSDSLWVIVSIIPACVR*QIAGRR
Trigger: GCGTCGCCCAGCGATTTGCCACCGCACGCACGCCGG...GATGATGGACACTATGACCCAAAGTGAGTCAGAAACAACCAGGCCCCCGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594943.1
CDS-3UTR TCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCAGGCCTTCCTCTTTCATaGATCCTCGTCAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSGLPLS*ILVSTD
Trigger: GTCTGTGCTGACGAGGATTCATGAAAGAGGAAGGCC...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCGCCCGGGATCCGGCGTaGGTGCGGTGGCAAATCGCT +
Preference number: 4 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCARDPA*VRWQIA
Trigger: AGCGATTTGCCACCGCACGCACGCCGGATCCCGGGC...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACGCCCGGGATCCGGCGTaGGTGCGGTGGCAAATCGCT +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHARDPA*VRWQIA
Trigger: AGCGATTTGCCACCGCACGCACGCCGGATCCCGGGC...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCAATGATCTCAGCTCACTaGAGCCTCTGCTTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSMISAH*SLCFLG
Trigger: GCCTAGGAAGCAGAGGCTGCAGTGAGCTGAGATCAT...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCACACCAGCTGGTCATGTaGAGTCATGGCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSHQLVM*SHGSLQ
Trigger: CTGAAGACTGCCATGACTCCACATGACCAGCTGGTG...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCAATTGATGGCACACTCTaGGTTCAGTTGGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSIDGTL*VQLGRW
Trigger: CCACCTTCCCAACTGAACTCAGAGTGTGCCATCAAT...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp GGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCCATGGCTAGCCCGGGATCCGGCGTaGGTGCGGTGGCAAATCGCT +
Preference number: 4 (lower is better)
Translates to: GLTTSDLPTNSVLQCPWLARDPA*VRWQIA
Trigger: AGCGATTTGCCACCGCACGCACGCCGGATCCCGGGC...TAGCCATGGGCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGCCGGCTCCAGTTACCTaGCCCGGACCCAGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVPAPVT*PGPSEP
Trigger: CGGCTCGCTGGGTCCGGGCCAGGTAACTGGAGCCGG...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGGCGGTGGCAAATCGCTaGGCGACGCTCAGACCGAGA +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWAVANR*ATLRPR
Trigger: TCTCGGTCTGAGCGTCGCCCAGCGATTTGCCACCGC...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGGCGCTGCCTCGGCCATaGGACTTTAGGCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVALPRP*DFRRGG
Trigger: CCCGCCCCGCCTAAAGTCCCATGGCCGAGGCAGCGC...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTGGGCAGAGGTCCCTGTaGCCTTCCGCAGTGCATTGT +
Preference number: 4 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLGQRSL*PSAVHC
Trigger: ACAATGCACTGCGGAAGGCCACAGGGACCTCTGCCC...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp CTTTCCGGGGGCCTGGTTGTTTCTGACTCACTTTGGGTCATAGTGTCCATCATCGCGGTGGCAAATCGCTaGGCGACGCTCAGACCGAGA +
Preference number: 4 (lower is better)
Translates to: LSGGLVVSDSLWVIVSIIAVANR*ATLRPR
Trigger: TCTCGGTCTGAGCGTCGCCCAGCGATTTGCCACCGC...GATGATGGACACTATGACCCAAAGTGAGTCAGAAACAACCAGGCCCCCGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594943.1
CDS-3UTR CCA 90 bp CTCACTTTGGGTCATAGTGTCCATCATCAGGTGAGCACTGAGCCACACAATTATGCGCTGCCTCGGCCATaGGACTTTAGGCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LTLGHSVHHQVSTEPHNYALPRP*DFRRGG
Trigger: CCCGCCCCGCCTAAAGTCCCATGGCCGAGGCAGCGC...ATAATTGTGTGGCTCAGTGCTCACCTGATGATGGACACTATGACCCAAAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594943.1
CDS-3UTR CCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCACCTAACCCTGATTCTTaGCCAGGCAAAAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSPNPDS*PGKKVT
Trigger: AGTGACCTTTTTGCCTGGCCAAGAATCAGGGTTAGG...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTCTTGGTTCAGGCTTCTaGTTGTCCTCAGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLLGSGF*LSSGWL
Trigger: GAGCCAGCCTGAGGACAATCAGAAGCCTGAACCAAG...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACGGTGCCGCAGCCCAGTaGCGCCATCAAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHGAAAQ*RHQGCL
Trigger: AAGACATCCTTGATGGCGTCACTGGGCTGCGGCACC...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGGGGATCCGGCGTGCGTaGGGTGGCAAATCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKGIRRA*GGKSLG
Trigger: GCCCAGCGATTTGCCACCGCACGCACGCCGGATCCC...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCGCCCGGGATCCGGCGTaGGTGCGGTGGCAAATCGCT +
Preference number: 4 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLARDPA*VRWQIA
Trigger: AGCGATTTGCCACCGCACGCACGCCGGATCCCGGGC...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594943.1
ENST00000602149.1
CDS-3UTR GCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCACTATGGTTCAGAATCTaGCAGTCGATGTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSLWFRI*QSMFLW
Trigger: CCACAGAAACATCGACTGGCAGATTCTGAACCATAG...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGGCGCTGCCTCGGCCATaGGACTTTAGGCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEEALPRP*DFRRGG
Trigger: CCCGCCCCGCCTAAAGTCCCATGGCCGAGGCAGCGC...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCCTGCTGTGGGTGGTCTaGTGTTGGAGAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: MQVPALEFVTNASSQGDLLLWVV*CWRRPR
Trigger: CCTGGGCCTTCTCCAACACCAGACCACCCACAGCAG...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCATGTCTGAAGGAATCCTaGGCTATGGTTCAGAATCTG +
Preference number: 4 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSCLKES*AMVQNL
Trigger: CAGATTCTGAACCATAGCCCAGGATTCCTTCAGACA...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACGGCACGAGAATCCCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHGTRIP*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGGGATTCTCGTGCC...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACGCTGGGATTACAGCATaGGCCACCATGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHAGITA*ATMSSL
Trigger: GAGGCTGGACATGGTGGCTCATGCTGTAATCCCAGC...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGCCAGGCAAGCTCCTCTaGGGGCGGACACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKPGKLL*GRTPPP
Trigger: TGGAGGTGGTGTCCGCCCGCAGAGGAGCTTGCCTGG...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCCCAGGCAAGCTCCTCTaGGGGCGGACACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLPGKLL*GRTPPP
Trigger: TGGAGGTGGTGTCCGCCCGCAGAGGAGCTTGCCTGG...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594943.1
ENST00000602149.1
CDS-3UTR GCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGTCGCCCAGGCTGGAGTaGAATGGCGCGACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVSPRLE*NGATLA
Trigger: AGCCAAGGTCGCGCCATTGCACTCCAGCCTGGGCGA...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp TGCCTTCTGGAGGAAGCAGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTAAACCCTCACTCCAGTaGTCAGCCCATTCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: CLLEEAAHLCRVPWLSKCKPSLQ*SAHSEV
Trigger: GACCTCAGAATGGGCTGAGCACTGGAGTGAGGGTTT...ACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp TGCCTTCTGGAGGAAGCAGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTTCAAAAGGCAGTATCTaGCTCCCCTTTGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CLLEEAAHLCRVPWLSKCSKGSI*LPFEPC
Trigger: GCAGGGCTCAAAGGGGAGGCAGATACTGCCTTTTGA...ACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCGGCTCCAGTTACCTaGCCCGGACCCAGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: WATRIQIALLGQSWVLSLPAPVT*PGPSEP
Trigger: CGGCTCGCTGGGTCCGGGCCAGGTAACTGGAGCCGG...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGCTTGTCTGCTGTGGGTaGTCTGGTGTTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWLVCCG*SGVGEG
Trigger: GCCTTCTCCAACACCAGACCACCCACAGCAGACAAG...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTGGCTTTCCGGGGGCCTaGTTGTTTCTGACTCACTTT +
Preference number: 4 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLGFPGA*LFLTHF
Trigger: AAAGTGAGTCAGAAACAACCAGGCCCCCGGAAAGCC...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594943.1
ENST00000602149.1
CDS-3UTR CCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTTGCTGCAGCCTTGACTaGGGCAGCAGGCCCCCATGT +
Preference number: 4 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLCCSLD*GSRPPC
Trigger: ACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCA...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp TTTTGCATGCCTGTAATCCCTGCTACTCGGGTGGCTGAGGCACGAGAATCCCTTGAGAAGCCTGAGGTGTaGTTGGCTCCAGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: FCMPVIPATRVAEARESLEKPEV*LAPGLF
Trigger: GAACAAGCCTGGAGCCAACCACACCTCAGGCTTCTC...AAGGGATTCTCGTGCCTCAGCCACCCGAGTAGCAGGGATTACAGGCATGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTCCACCTCTTCCTGACTaGTCTCCCTTTGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLPPLPD*SPFVCI
Trigger: GATGCAGACAAAGGGAGACCAGTCAGGAAGAGGTGG...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp AGCTCACTCAGAGCAATGCCCTTGATTTTCAGGGCTCACATCAGCATTTTGCTTGGCAGGAGGATCACTTaGGGCCAGGCACTCGAGACC +
Preference number: 4 (lower is better)
Translates to: SSLRAMPLIFRAHISILLGRRIT*GQALET
Trigger: GGTCTCGAGTGCCTGGCCTCAAGTGATCCTCCTGCC...AAGCAAAATGCTGATGTGAGCCCTGAAAATCAAGGGCATTGCTCTGAGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTTACTTTGGGAGCAGCTaGATTCATGTCTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLYFGSS*IHVWTL
Trigger: CAGGGTCCAGACATGAATGCAGCTGCTCCCAAAGTA...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTTGGTCTCCCTTTGTCTaGATCAGAGATTGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLWSPFV*IRDCRG
Trigger: ACCCCGACAATCTCTGATGCAGACAAAGGGAGACCA...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCATCTCTCAGGCACAATTaGATTGTCAAAAGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSSLRHN*IVKRQY
Trigger: ATACTGCCTTTTGACAATGCAATTGTGCCTGAGAGA...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGCTGCTGTGGGTGGTCTaGTGTTGGAGAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVLLWVV*CWRRPR
Trigger: CCTGGGCCTTCTCCAACACCAGACCACCCACAGCAG...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACCCACCTGCTAGAGCATaGGCAGGAGCTGTGGATAGT +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHPPARA*AGAVDS
Trigger: ACTATCCACAGCTCCTGCCCATGCTCTAGCAGGTGG...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 72 bp TTGGCTTCCATAGACGGAGGTCATGGGCAGTGGGTGTaGTGTAGACAGATAGCACTACCCTCCATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LASIDGGHGQWV*CRQIALPSMAV
Trigger: AACTGCCATGGAGGGTAGTGCTATCTGTCTACACAACACCCACTGCCCATGACCTCCGTCTATGGAAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 72 bp CAATTGCATTGTCAAAAGGCAGTATCTGCCTCCCCTTaGAGCCCTGCACGGAAGTCAGCCCAAAGGAGACCT +
Preference number: 4 (lower is better)
Translates to: QLHCQKAVSASP*SPARKSAQRRP
Trigger: AGGTCTCCTTTGGGCTGACTTCCGTGCAGGGCTCAAAGGGGAGGCAGATACTGCCTTTTGACAATGCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGTGGAGTCCTGGCCTGTaGCACTCCTTGCGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVWSPGL*HSLRRK
Trigger: CTTTCTGCGCAAGGAGTGTCACAGGCCAGGACTCCA...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TGCCTTCTGGAGGAAGCAGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTTGGCTTGCAGATGGCTaGCTTGCTGTGTTCTTACAA +
Preference number: 4 (lower is better)
Translates to: CLLEEAAHLCRVPWLSKCWLADG*LAVFLQ
Trigger: TTGTAAGAACACAGCAAGTCAGCCATCTGCAAGCCA...ACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAACCAGGCAAGCTCCTCTaGGGGCGGACACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKPGKLL*GRTPPP
Trigger: TGGAGGTGGTGTCCGCCCGCAGAGGAGCTTGCCTGG...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGCAAATCCTGCTTTCCTaGCCGTGCAGCAATCATCTC +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWQILLS*PCSNHL
Trigger: GAGATGATTGCTGCACGGGCAGGAAAGCAGGATTTG...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGTGTTCTCTCAAATCCTaGTTTCCTGCCCGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWCSLKS*FPARAA
Trigger: TGCTGCACGGGCAGGAAAGCAGGATTTGAGAGAACA...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATATCGCCCAGGCTGGAGTaGAATGGCGCGACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QFSPSVPMATMKDLGNKISPRLE*NGATLA
Trigger: AGCCAAGGTCGCGCCATTGCACTCCAGCCTGGGCGA...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACCCTCTCTTCCTGGCTTaGAGATGGCTGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHPLFLA*RWLTCC
Trigger: ACAGCAAGTCAGCCATCTGCAAGCCAGGAAGAGAGG...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp TTTTGCATGCCTGTAATCCCTGCTACTCGGGTGGCTGAGGCACGAGAATCCCTTAGATTTGTTAGAAAATaGCTCCTGGGGCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: FCMPVIPATRVAEARESLRFVRK*LLGPGA
Trigger: TGCACCCGGCCCCAGGAGGCATTTTCTAACAAATCT...AAGGGATTCTCGTGCCTCAGCCACCCGAGTAGCAGGGATTACAGGCATGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTCTCCCCTTTGAGCCCTaGACGGAAGTCAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLLPFEP*TEVSPK
Trigger: CTTTGGGCTGACTTCCGTGCAGGGCTCAAAGGGGAG...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp TGCCTTCTGGAGGAAGCAGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTTTCCTGGCTTGCAGATaGCTGACTTGCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: CLLEEAAHLCRVPWLSKCFLACR*LTCCVL
Trigger: AAGAACACAGCAAGTCAGCCATCTGCAAGCCAGGAA...ACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTCTGGATAGAAGGAGGTaGAAGAGGGTAACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLLDRRR*KRVTVF
Trigger: GAACACTGTTACCCTCTTCCACCTCCTTCTATCCAG...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCGCTGATTGGCCATCCTaGTGGGGTCAGCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLADWPS*WGQLWP
Trigger: TGGCCACAGCTGACCCCACCAGGATGGCCAATCAGC...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACAAGAAGGAAGCTGATTaGCCATCCTGGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHKKEAD*PSWWGQ
Trigger: CTGACCCCACCAGGATGGCCAATCAGCTTCCTTCTT...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp GGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCCATGGCTAGCAGGTCCCAGCACTTaGGTTTGTCACAAATGCCTC +
Preference number: 4 (lower is better)
Translates to: GLTTSDLPTNSVLQCPWLAGPST*VCHKCL
Trigger: GAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGC...TAGCCATGGGCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGTGCCCATGGCTACAATaGAGGACCTGGGAAATAAGA +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWCPWLQ*RTWEIR
Trigger: TCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCA...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACGGTCACATGGCCCTGTaGTGGTTTCACAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHGHMAL*WFHKLF
Trigger: GAAGAGTTTGTGAAACCATCACAGGGCCATGTGACC...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTGGAGGAACCAGCGTGTaGAAAGTGACAGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLGGTSV*KVTGSS
Trigger: TGAGCTCCCTGTCACTTTTCACACGCTGGTTCCTCC...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGCCAGGCAAGCTCCTCTaGGGGCGGACACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKPGKLL*GRTPPP
Trigger: TGGAGGTGGTGTCCGCCCGCAGAGGAGCTTGCCTGG...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGTCAGCCTCTATTCCATaGAAACAACCTACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWSASIP*KQPTEA
Trigger: GGCCTCAGTAGGTTGTTTGCATGGAATAGAGGCTGA...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCTGTCCTGGTTCTGGTaGTGTTGCAGGTTAGAACCA +
Preference number: 4 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCLSWFW*CCRLEP
Trigger: TGGTTCTAACCTGCAACAGCACCAGAACCAGGACAG...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGCTGCTTTCCTGCCCGTaGAGCAATCATCTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWLLSCP*SNHLKN
Trigger: GTTTTTGAGATGATTGCTGCACGGGCAGGAAAGCAG...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGTTCTCTCAAATCCTaGTTTCCTGCCCGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: MQVPALEFVTNASSQGDLCSLKS*FPARAA
Trigger: TGCTGCACGGGCAGGAAAGCAGGATTTGAGAGAACA...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGGCGGTGGCAAATCGCTaGGCGACGCTCAGACCGAGA +
Preference number: 4 (lower is better)
Translates to: WATRIQIALLGQSWVLSLAVANR*ATLRPR
Trigger: TCTCGGTCTGAGCGTCGCCCAGCGATTTGCCACCGC...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGCTTGTCTGCTGTGGGTaGTCTGGTGTTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVLVCCG*SGVGEG
Trigger: GCCTTCTCCAACACCAGACCACCCACAGCAGACAAG...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGAACAGTTCAGCAAGATaGAAGAGGACCCTCAACAGG +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWNSSAR*KRTLNR
Trigger: CCTGTTGAGGGTCCTCTTCCATCTTGCTGAACTGTT...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCGTTCACCCTTCACACTaGCAGAGCACATACATCAGC +
Preference number: 4 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCVHPSH*QSTYIS
Trigger: GCTGATGTATGTGCTCTGCCAGTGTGAAGGGTGAAC...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACCTTTGCCGTGTCCCATaGCTGTCAAAGTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHLCRVP*LSKCCV
Trigger: CACACAACACTTTGACAGCCATGGGACACGGCAAAG...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 72 bp AGAAAGAAAATGCCTTCTGGAGGAAGCAGCACACCTTaGCCGTGTCCCATGGCTGTCAAAGTGTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: RKKMPSGGSSTP*PCPMAVKVLCA
Trigger: GGCACACAACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCATTTTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGCTGGCATCGACACCATaGTTAGGACCACACAGCTCT +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVLASTP*LGPHSS
Trigger: AGAGCTGTGTGGTCCTAATCATGGTGTCGATGCCAG...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGTATACCCCCAAACCATaGAGCCATAGTAACACAGAC +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWYTPKP*SHSNTD
Trigger: GTCTGTGTTACTATGGCTTCATGGTTTGGGGGTATA...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACCTGAGACCTGAAAGCTaGGTAGGAGTTAGCTGGATA +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHLRPES*VGVSWI
Trigger: TATCCAGCTAACTCCTACTCAGCTTTCAGGTCTCAG...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCAGCAGGGGCCATGGGTaGTGGGCTGTTCTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLSRGHG*WAVLRE
Trigger: TTCTCTAAGAACAGCCCATCACCCATGGCCCCTGCT...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp TTTTGCATGCCTGTAATCCCTGCTACTCGGGTGGCTGAGGCACGAGAATCCCTTGACACAGTAACGGTCTaGTCTATTTTTCTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: FCMPVIPATRVAEARESLDTVTV*SIFLSP
Trigger: GGGGGAAAGAAAAATAGATCAGACCGTTACTGTGTC...AAGGGATTCTCGTGCCTCAGCCACCCGAGTAGCAGGGATTACAGGCATGCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACAGACATATCTGGATaGACCTTTGGATGGGACACA +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWTDISG*TFGWDT
Trigger: TGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGT...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp GGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCCATGGCTACCACTGTCCTGGTTCTaGTGCTGTTGCAGGTTAGAA +
Preference number: 4 (lower is better)
Translates to: GLTTSDLPTNSVLQCPWLPLSWF*CCCRLE
Trigger: TTCTAACCTGCAACAGCACCAGAACCAGGACAGTGG...TAGCCATGGGCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTGGGTCATAGTGTCCATCATCAGGTGAGCACTGAGCCACACAATTATTCAGAGCCACCTGCTAGAGCATaGGCAGGAGCTGTGGATAGT +
Preference number: 4 (lower is better)
Translates to: LGHSVHHQVSTEPHNYSEPPARA*AGAVDS
Trigger: ACTATCCACAGCTCCTGCCCATGCTCTAGCAGGTGG...CTCTGAATAATTGTGTGGCTCAGTGCTCACCTGATGATGGACACTATGACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594943.1
CDS-3UTR CCA 90 bp TTTTGCATGCCTGTAATCCCTGCTACTCGGGTGGCTGAGGCACGAGAATCCCTTCAGTCGATGTTTCTGTaGATCCTTGTACCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: FCMPVIPATRVAEARESLQSMFL*ILVPQS
Trigger: TGACTGAGGTACAAGGATCCACAGAAACATCGACTG...AAGGGATTCTCGTGCCTCAGCCACCCGAGTAGCAGGGATTACAGGCATGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACAGGCAAAAAGGTCACTaGAACTGCCCACCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHRQKGH*NCPPFS
Trigger: AGAGAAAGGTGGGCAGTTCCAGTGACCTTTTTGCCT...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGTGGAGTCCTGGCCTGTaGCACTCCTTGCGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: WATRIQIALLGQSWVLSLWSPGL*HSLRRK
Trigger: CTTTCTGCGCAAGGAGTGTCACAGGCCAGGACTCCA...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCCACATCTCACAAGAATaGGCATTTGGGATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: MQVPALEFVTNASSQGDLHISQE*AFGMEG
Trigger: TCCTTCCATCCCAAATGCTCATTCTTGTGAGATGTG...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGCAGGGAAGTGTCCCCTaGTGCTCACTGAGGTACAAA +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKQGSVP*CSLRYK
Trigger: TTTGTACCTCAGTGAGCATCAGGGGACACTTCCCTG...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp GGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCCATGGCTACTGGTGTTCCACAAGTaGGTATTTGGAGCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: GLTTSDLPTNSVLQCPWLLVFHK*VFGAQG
Trigger: TCCTTGAGCTCCAAATACTCACTTGTGGAACACCAG...TAGCCATGGGCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCTATACCCCCAAACCATaGAGCCATAGTAACACAGAC +
Preference number: 4 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCYTPKP*SHSNTD
Trigger: GTCTGTGTTACTATGGCTTCATGGTTTGGGGGTATA...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGTTAGATGCCTTATGCTaGCGATGTGTGTTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWLDALC*RCVLLK
Trigger: CTTTAGCAACACACATCGTCAGCATAAGGCATCTAA...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TTTTGCATGCCTGTAATCCCTGCTACTCGGGTGGCTGAGGCACGAGAATCCCTTGCTTTCTTTTCACAATaGGAATCCAGCTTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: FCMPVIPATRVAEARESLAFFSQ*ESSFGH
Trigger: GTGACCAAAGCTGGATTCTCATTGTGAAAAGAAAGC...AAGGGATTCTCGTGCCTCAGCCACCCGAGTAGCAGGGATTACAGGCATGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTGGCCAGATTTATGTTTaGCTTTACCCAAACATCTCA +
Preference number: 4 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLGQIYV*LYPNIS
Trigger: TGAGATGTTTGGGTAAAGTCAAACATAAATCTGGCC...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGCTGTCCTGGTTCTGGTaGTGTTGCAGGTTAGAACCA +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVLSWFW*CCRLEP
Trigger: TGGTTCTAACCTGCAACAGCACCAGAACCAGGACAG...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGGTGCATACTCTTGTCTaGTGTGGGTGGTCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVVHTLV*CGWSGV
Trigger: AACACCAGACCACCCACAGCAGACAAGAGTATGCAC...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGGTTGAAAGGTCTCCCTaGTTCTATGTGCATACTCTT +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWVERSP*FYVHTL
Trigger: AAGAGTATGCACATAGAAGCAGGGAGACCTTTCAAC...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCGTTGGGTTTTGTCTTTaGCTCGAACAGTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: MQVPALEFVTNASSQGDLVGFCL*LEQFSK
Trigger: CTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAAC...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCGTTGGGTTTTGTCTTTaGCTCGAACAGTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCVGFCL*LEQFSK
Trigger: CTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAAC...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGAAAACCATTTCCCACTaGCCACAGACGTATAAGGTT +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWKTISH*PQTYKV
Trigger: AACCTTATACGTCTGTGGCCAGTGGGAAATGGTTTT...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGCCACTGTCCTGGTTCTaGTGCTGTTGCAGGTTAGAA +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVPLSWF*CCCRLE
Trigger: TTCTAACCTGCAACAGCACCAGAACCAGGACAGTGG...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGTGGGTGGTCTGGTGTTaGAGAAGGCCCAGGATGGTT +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEEWVVWC*RRPRMV
Trigger: AACCATCCTGGGCCTTCTCCAACACCAGACCACCCA...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCTACTCTTGTCTGCTGTaGGTGGTCTGGTGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLAYSCLL*VVWCWR
Trigger: TCTCCAACACCAGACCACCCACAGCAGACAAGAGTA...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTTTGCATGCCTGTAATCCCTGCTACTCGGGTGGCTGAGGCACGAGAATCCCTTGAACAGGAATCTTTATaGTTGCTCTGGCTCAATCCA +
Preference number: 4 (lower is better)
Translates to: FCMPVIPATRVAEARESLEQESL*LLWLNP
Trigger: TGGATTGAGCCAGAGCAACCATAAAGATTCCTGTTC...AAGGGATTCTCGTGCCTCAGCCACCCGAGTAGCAGGGATTACAGGCATGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp TTGGGTCATAGTGTCCATCATCAGGTGAGCACTGAGCCACACAATTATTCAGAGGGCTTTCCGGGGGCCTaGTTGTTTCTGACTCACTTT +
Preference number: 4 (lower is better)
Translates to: LGHSVHHQVSTEPHNYSEGFPGA*LFLTHF
Trigger: AAAGTGAGTCAGAAACAACCAGGCCCCCGGAAAGCC...CTCTGAATAATTGTGTGGCTCAGTGCTCACCTGATGATGGACACTATGACCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594943.1
CDS-3UTR CCA 90 bp CTTTCCGGGGGCCTGGTTGTTTCTGACTCACTTTGGGTCATAGTGTCCATCATCGGTCATGTGGAGTCATaGCAGTCTTCAGATAATGTG +
Preference number: 4 (lower is better)
Translates to: LSGGLVVSDSLWVIVSIIGHVES*QSSDNV
Trigger: CACATTATCTGAAGACTGCCATGACTCCACATGACC...GATGATGGACACTATGACCCAAAGTGAGTCAGAAACAACCAGGCCCCCGGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594943.1
CDS-3UTR CCA 90 bp TTGGGTCATAGTGTCCATCATCAGGTGAGCACTGAGCCACACAATTATTCAGAGCACCAGCTGGTCATGTaGAGTCATGGCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LGHSVHHQVSTEPHNYSEHQLVM*SHGSLQ
Trigger: CTGAAGACTGCCATGACTCCACATGACCAGCTGGTG...CTCTGAATAATTGTGTGGCTCAGTGCTCACCTGATGATGGACACTATGACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594943.1
3UTR CAA 72 bp GAGGCTGAGAAGTCCAAGATCAAGGTGTCGGCAAATTaGATTCCTATTGAGACCTCTCTTCCTGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: EAEKSKIKVSAN*IPIETSLPGLQ
Trigger: CTGCAAGCCAGGAAGAGAGGTCTCAATAGGAATCAAATTTGCCGACACCTTGATCTTGGACTTCTCAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 72 bp CTACCCTCCATGGCAGTTGTAGCCCAACAGTGGGATTaGTGCCTGTCTTTTATCTCCTTGGCTGCCATAATA +
Preference number: 4 (lower is better)
Translates to: LPSMAVVAQQWD*CLSFISLAAII
Trigger: TATTATGGCAGCCAAGGAGATAAAAGACAGGCACAAATCCCACTGTTGGGCTACAACTGCCATGGAGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCATGCAAACAACCTACTaGGGCCATAAGCGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCMQTTY*GHKRKV
Trigger: AACTTTTCGCTTATGGCCTCAGTAGGTTGTTTGCAT...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCCAGGGAAGTGTCCCCTaGTGCTCACTGAGGTACAAA +
Preference number: 4 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFQGSVP*CSLRYK
Trigger: TTTGTACCTCAGTGAGCATCAGGGGACACTTCCCTG...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCCTGGTGTTCCACAAGTaGGTATTTGGAGCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLALVFHK*VFGAQG
Trigger: TCCTTGAGCTCCAAATACTCACTTGTGGAACACCAG...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCGTGTGGATTCTATGGTaGTCAAGAAGTGACTGTTTG +
Preference number: 4 (lower is better)
Translates to: MQVPALEFVTNASSQGDLVWILW*SRSDCL
Trigger: CAAACAGTCACTTCTTGATCACCATAGAATCCACAC...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCAGACGAGCGGATAAATaGTTTCCCACATATGATGCA +
Preference number: 4 (lower is better)
Translates to: MQVPALEFVTNASSQGDLRRADK*FPTYDA
Trigger: TGCATCATATGTGGGAAATCATTTATCCGCTCGTCT...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCTGGATTCTTTGGTGCTaGAGAAGTTTAACCTCAAGG +
Preference number: 4 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCWILWC*RSLTSR
Trigger: CCTTGAGGTTAAACTTCTTCAGCACCAAAGAATCCA...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCCCGGTGTGGATTCGCTaGTGCTCAACAAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLAPVWIR*CSTSLF
Trigger: AAACAAACTTGTTGAGCATCAGCGAATCCACACCGG...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCTTAGATGCCTTATGCTaGCGATGTGTGTTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCLDALC*RCVLLK
Trigger: CTTTAGCAACACACATCGTCAGCATAAGGCATCTAA...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGCACAACAGATCTGGGTaGATCACAAAAACCACATAT +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWHNRSG*ITKTTY
Trigger: ATATGTGGTTTTTGTGATTCACCCAGATCTGTTGTG...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTTTGTTTTCTGATGCTTaGTATCCATGCTCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLLFSDA*YPCSVD
Trigger: ATCAACAGAGCATGGATATCAAGCATCAGAAAACAA...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGTATCTGCCTCCCCTTTaGGCCCTGCACGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKYLPPL*ALHGSQ
Trigger: CTGACTTCCGTGCAGGGCTCAAAGGGGAGGCAGATA...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAATGCGCAGAAAGAGTCTaGTCAGAAGGGGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKCAERV*SEGASS
Trigger: TGAGGAGGCCCCTTCTGAGCAGACTCTTTCTGCGCA...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCTGACAGAGGAATTTTaGAGCTATTCAGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCLTEEF*SYSEAR
Trigger: CCTTGCTTCTGAATAGCTGCAAAATTCCTCTGTCAG...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCCTCCCTGCTTCTATGTaGATACTCTTGTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLALPASM*ILLSAV
Trigger: CACAGCAGACAAGAGTATGCACATAGAAGCAGGGAG...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGCTCCCTGCTTCTATGTaGATACTCTTGTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVLPASM*ILLSAV
Trigger: CACAGCAGACAAGAGTATGCACATAGAAGCAGGGAG...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCGTTGAAAGGTCTCCCTaGTTCTATGTGCATACTCTT +
Preference number: 4 (lower is better)
Translates to: MQVPALEFVTNASSQGDLVERSP*FYVHTL
Trigger: AAGAGTATGCACATAGAAGCAGGGAGACCTTTCAAC...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp TTTTGCATGCCTGTAATCCCTGCTACTCGGGTGGCTGAGGCACGAGAATCCCTTGACACAGGTACCTTTTaGTGTGAACAGGAATCTTTA +
Preference number: 4 (lower is better)
Translates to: FCMPVIPATRVAEARESLDTGTF*CEQESL
Trigger: TAAAGATTCCTGTTCACAGCAAAAGGTACCTGTGTC...AAGGGATTCTCGTGCCTCAGCCACCCGAGTAGCAGGGATTACAGGCATGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTTCCCCCACACTTAGCTaGTGCTGTTGCTGTTATTGT +
Preference number: 4 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLSPTLS*CCCCYC
Trigger: ACAATAACAGCAACAGCAGCAGCTAAGTGTGGGGGA...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCTCCTCAAAGGTCACATaGCCCTGCGGCGTAATCACT +
Preference number: 4 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFSSKVT*PCGVIT
Trigger: AGTGATTACGCCGCAGGGCCATGTGACCTTTGAGGA...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240719.7
CDS-3UTR CCA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGTGGGTGGTCTGGTGTTaGAGAAGGCCCAGGATGGTT +
Preference number: 4 (lower is better)
Translates to: WATRIQIALLGQSWVLSLWVVWC*RRPRMV
Trigger: AACCATCCTGGGCCTTCTCCAACACCAGACCACCCA...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGCCCTCTTGGGTAATGTaGGAGAGGGAATATCCCACT +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKPSWVM*EREYPT
Trigger: AGTGGGATATTCCCTCTCCCACATTACCCAAGAGGG...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGGTTCACCCTTCACACTaGCAGAGCACATACATCAGC +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKVHPSH*QSTYIS
Trigger: GCTGATGTATGTGCTCTGCCAGTGTGAAGGGTGAAC...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGGGTGCAGTAGCACCTTaGGAGACTGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKGAVAP*ETEAGG
Trigger: TCCTCCTGCCTCAGTCTCCCAAGGTGCTACTGCACC...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACCCATCAAGGATGTCTTaGTTCTCTGTTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHPSRMS*FSVPSS
Trigger: AGAAGAAGGAACAGAGAACCAAGACATCCTTGATGG...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACTGTCATAACCTATTGTaGGAGTTCCAAAGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHCHNLL*EFQRGH
Trigger: ATGCCCTCTTTGGAACTCCCACAATAGGTTATGACA...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTCACTCTGAGTTCAGTTaGGAAGGTGGACATCAATCC +
Preference number: 4 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLHSEFS*EGGHQS
Trigger: GGATTGATGTCCACCTTCCCAACTGAACTCAGAGTG...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCGTGACTGTTTGTATATaGAGGATTTCCCACATTCAC +
Preference number: 4 (lower is better)
Translates to: MQVPALEFVTNASSQGDLVTVCI*RISHIH
Trigger: GTGAATGTGGGAAATCCTTCATATACAAACAGTCAC...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGCCGGTGTGGATTCGCTaGTGCTCAACAAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKPVWIR*CSTSLF
Trigger: AAACAAACTTGTTGAGCATCAGCGAATCCACACCGG...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGTTGAGCACATGTGAGTaGCTGATGAAAACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKLSTCE*LMKTVR
Trigger: CCTCACCGTTTTCATCAGTCACTCACATGTGCTCAA...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAACTGGCATCGACACCATaGTTAGGACCACACAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKLASTP*LGPHSS
Trigger: AGAGCTGTGTGGTCCTAATCATGGTGTCGATGCCAG...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCCAGTGCTGGGAAATATaGAGCATCACTGCAAATAAA +
Preference number: 4 (lower is better)
Translates to: MQVPALEFVTNASSQGDLQCWEI*SITANK
Trigger: TTTATTTGCAGTGATGCTTCATATTTCCCAGCACTG...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGGGTCACATGGCCCTGTaGTGGTTTCACAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEEGHMAL*WFHKLF
Trigger: GAAGAGTTTGTGAAACCATCACAGGGCCATGTGACC...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376233.8
CDS-3UTR TCA 90 bp AGCTCACTCAGAGCAATGCCCTTGATTTTCAGGGCTCACATCAGCATTTTGCTTTCAGAGCAATGCCCTTaGTTTTCAGGGCTCACATCA +
Preference number: 4 (lower is better)
Translates to: SSLRAMPLIFRAHISILLSEQCP*FSGLTS
Trigger: TGATGTGAGCCCTGAAAATCAAGGGCATTGCTCTGA...AAGCAAAATGCTGATGTGAGCCCTGAAAATCAAGGGCATTGCTCTGAGTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGTACAAGAATCCAGATTaGTCTTCTTGGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWYKNPD*SSWSKL
Trigger: CAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTA...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCCAAATAAACAATTCATaGAGGTCCCAGCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: MQVPALEFVTNASSQGDLQINNS*RSQHLS
Trigger: ACTCAAGTGCTGGGACCTGCATGAATTGTTTATTTG...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGCACAAAATCTTTAGATaGCTTATGCTGACGATGTGT +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWHKIFR*LMLTMC
Trigger: ACACATCGTCAGCATAAGGCATCTAAAGATTTTGTG...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCGTTATATGTACCTTCTaGTGCCTGACAAGGGAATAT +
Preference number: 4 (lower is better)
Translates to: MQVPALEFVTNASSQGDLVICTF*CLTREY
Trigger: ATATTCCCTTGTCAGGCACCAGAAGGTACATATAAC...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp GGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCCATGGCTACTTCTTGGTCAAAGTTaGGTTTTGTCTTTGCCTCGA +
Preference number: 4 (lower is better)
Translates to: GLTTSDLPTNSVLQCPWLLLGQS*VLSLPR
Trigger: TCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAG...TAGCCATGGGCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATAAGCCCATTTCCCTCTTaGGTAATGTGGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: QFSPSVPMATMKDLGNKISPFPS*VMWERE
Trigger: TTCCCTCTCCCACATTACCCAAGAGGGAAATGGGCT...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCCCATTTCCCTCTTaGGTAATGTGGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFSPFPS*VMWERE
Trigger: TTCCCTCTCCCACATTACCCAAGAGGGAAATGGGCT...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCATCTGGATGCACCTTTaGATGGGACACATTCACTCT +
Preference number: 4 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLAIWMHL*MGHIHS
Trigger: AGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGAT...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTGGTCATGTGGAGTCATaGCAGTCTTCAGATAATGTG +
Preference number: 4 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLGHVES*QSSDNV
Trigger: CACATTATCTGAAGACTGCCATGACTCCACATGACC...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCTGTGTTCTTACAAGGTaGAGGGACAGAGGAGAGATC +
Preference number: 4 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLCVLTR*RDRGEI
Trigger: GATCTCTCCTCTGTCCCTCCACCTTGTAAGAACACA...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTGTTGTAGCCCAACAGTaGGATTTGTGCCTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLVVAQQ*DLCLSF
Trigger: AAAAGACAGGCACAAATCCCACTGTTGGGCTACAAC...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 72 bp CAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTaGCCTCGAACAGTTCAGCAAGATGGAAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: QIALLGQSWVLS*PRTVQQDGRGP
Trigger: GGGTCCTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 72 bp GCAATGCCCTTGATTTTCAGGGCTCACATCAGCATTTaGCTTACTTTGGGAGCAGCTGCATTCATGTCTGGA +
Preference number: 4 (lower is better)
Translates to: AMPLIFRAHISI*LTLGAAAFMSG
Trigger: TCCAGACATGAATGCAGCTGCTCCCAAAGTAAGCAAAATGCTGATGTGAGCCCTGAAAATCAAGGGCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 72 bp AGTACTTACTCTCTGCTTCCCATAGTCCTCGTGGGATaGCCATTGTTTGTGTCATCTTCAACAGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: STYSLLPIVLVG*PLFVSSSTASP
Trigger: TGGGGAAGCTGTTGAAGATGACACAAACAATGGCAATCCCACGAGGACTATGGGAAGCAGAGAGTAAGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGATGCAAACAACCTACTaGGGCCATAAGCGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVMQTTY*GHKRKV
Trigger: AACTTTTCGCTTATGGCCTCAGTAGGTTGTTTGCAT...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGTGCTCTCCTCCTTTCTaGTGTGTTTCTCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEECSPPF*CVSLHC
Trigger: ACAGTGGAGAGAAACACATCAGAAAGGAGGAGAGCA...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCTGCTCTCCTCCTTTCTaGTGTGTTTCTCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFCSPPF*CVSLHC
Trigger: ACAGTGGAGAGAAACACATCAGAAAGGAGGAGAGCA...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGTGGGAAAAGATTGTCTaGCAGAGGAATTTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVWEKIV*QRNFAA
Trigger: AGCTGCAAAATTCCTCTGTCAGACAATCTTTTCCCA...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGGTGTGGATTCTCTGCTaGTGGCCAACAAATGTTTGT +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKVWILC*WPTNVC
Trigger: ACAAACATTTGTTGGCCATCAGCAGAGAATCCACAC...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGAGACGAGCGGATAAATaGTTTCCCACATATGATGCA +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVRRADK*FPTYDA
Trigger: TGCATCATATGTGGGAAATCATTTATCCGCTCGTCT...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGTTCCTTGAGCACATGTaGGTGACTGATGAAAACGGT +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKFLEHM*VTDENG
Trigger: ACCGTTTTCATCAGTCACTCACATGTGCTCAAGGAA...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATATGCCCATGGCTACAATaGAGGACCTGGGAAATAAGA +
Preference number: 4 (lower is better)
Translates to: QFSPSVPMATMKDLGNKICPWLQ*RTWEIR
Trigger: TCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCA...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp AGCTCACTCAGAGCAATGCCCTTGATTTTCAGGGCTCACATCAGCATTTTGCTTAAAGTGTTGTGTGCCTaGACAACGTTGGCTTCCATA +
Preference number: 4 (lower is better)
Translates to: SSLRAMPLIFRAHISILLKVLCA*TTLASI
Trigger: TATGGAAGCCAACGTTGTTCAGGCACACAACACTTT...AAGCAAAATGCTGATGTGAGCCCTGAAAATCAAGGGCATTGCTCTGAGTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACTCATTAGTTGTTTTCTaGTGCTTGATATCCATGCTC +
Preference number: 4 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHSLVVF*CLISML
Trigger: GAGCATGGATATCAAGCATCAGAAAACAACTAATGA...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGGTGCATACTCTTGTCTaGTGTGGGTGGTCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: WATRIQIALLGQSWVLSLVHTLV*CGWSGV
Trigger: AACACCAGACCACCCACAGCAGACAAGAGTATGCAC...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGTTTCAACTAGTGATATaGAGATGTATGAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: QVPALEFVTNASSQGDLWFQLVI*RCMRVN
Trigger: ATTCACCCTCATACATCTGCATATCACTAGTTGAAA...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGAAAACGGTGAGGATATaGCACATGGTAGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVKTVRI*HMVVSV
Trigger: AACAGACACTACCATGTGGCATATCCTCACCGTTTT...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATACTGCTTTCCTGCCCGTaGAGCAATCATCTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: QFSPSVPMATMKDLGNKILLSCP*SNHLKN
Trigger: GTTTTTGAGATGATTGCTGCACGGGCAGGAAAGCAG...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAACAAATCCTGCTTTCCTaGCCGTGCAGCAATCATCTC +
Preference number: 4 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKQILLS*PCSNHL
Trigger: GAGATGATTGCTGCACGGGCAGGAAAGCAGGATTTG...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp AGCTCACTCAGAGCAATGCCCTTGATTTTCAGGGCTCACATCAGCATTTTGCTTTGTCAAAGTGTTGTGTaGCTGAACAACGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SSLRAMPLIFRAHISILLCQSVV*LNNVGF
Trigger: GAAGCCAACGTTGTTCAGGCACACAACACTTTGACA...AAGCAAAATGCTGATGTGAGCCCTGAAAATCAAGGGCATTGCTCTGAGTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGAATGAGCATTTGGGATaGAAGGACCTAGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKNEHLG*KDLALE
Trigger: CTCCAAAGCTAGGTCCTTCCATCCCAAATGCTCATT...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGAAGGCCCAGGATGGTTaGAAAATCCTTCTCAACATC +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKKAQDG*KILLNI
Trigger: GATGTTGAGAAGGATTTTCCAACCATCCTGGGCCTT...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCGGAGAAGGCCCAGGATaGTTGGAAAATCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFGEGPG*LENPSQ
Trigger: TTGAGAAGGATTTTCCAACCATCCTGGGCCTTCTCC...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATAAACAGTTCAGCAAGATaGAAGAGGACCCTCAACAGG +
Preference number: 4 (lower is better)
Translates to: QFSPSVPMATMKDLGNKINSSAR*KRTLNR
Trigger: CCTGTTGAGGGTCCTCTTCCATCTTGCTGAACTGTT...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATACTCATACTATGTCCCTaGGGGGACATAAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: QFSPSVPMATMKDLGNKILILCP*GDIKLE
Trigger: CTCCAACTTTATGTCCCCCCAGGGACATAGTATGAG...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGCTCATACTATGTCCCTaGGGGGACATAAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEELILCP*GDIKLE
Trigger: CTCCAACTTTATGTCCCCCCAGGGACATAGTATGAG...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGCTGGCACAACAGATCTaGGTGAATCACAAAAACCAC +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKLAQQI*VNHKNH
Trigger: GTGGTTTTTGTGATTCACCCAGATCTGTTGTGCCAG...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGAGGGAGCTCAGCTCTTaGGAGAGCCAAAGGATCATC +
Preference number: 4 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLRELSS*ESQRII
Trigger: GATGATCCTTTGGCTCTCCCAAGAGCTGAGCTCCCT...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 72 bp TCACTGCAAATAAACAATTCATGCAGGTCCCAGCACTaGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACC +
Preference number: 4 (lower is better)
Translates to: SLQINNSCRSQH*SLSQMPLLRET
Trigger: GGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCATGAATTGTTTATTTGCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 72 bp GAAGCCATAGTAACACAGACATATCTGGATGCACCTTaGGATGGGACACATTCACTCTTCTTGGCCACAATC +
Preference number: 4 (lower is better)
Translates to: EAIVTQTYLDAP*DGTHSLFLATI
Trigger: GATTGTGGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGTTACTATGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 72 bp GCCCAACAGTGGGATTTGTGCCTGTCTTTTATCTCCTaGGCTGCCATAATAAAATGTCATGGATTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: AQQWDLCLSFIS*AAIIKCHGLGG
Trigger: ACCACCCAATCCATGACATTTTATTATGGCAGCCAAGGAGATAAAAGACAGGCACAAATCCCACTGTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCGGGAATATCTTTTGTTaGAGGCTTTCCCACATTTAC +
Preference number: 4 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLAGNIFC*RLSHIY
Trigger: GTAAATGTGGGAAAGCCTTCAACAAAAGATATTCCC...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGCAGTGCTGGGAAATATaGAGCATCACTGCAAATAAA +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVQCWEI*SITANK
Trigger: TTTATTTGCAGTGATGCTTCATATTTCCCAGCACTG...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGGTCTTACAACCAGTaGCCTACCTACCAATTCAGT +
Preference number: 4 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFRSYNQ*PTYQFS
Trigger: ACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCT...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGAGGTCTTACAACCAGTaGCCTACCTACCAATTCAGT +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEERSYNQ*PTYQFS
Trigger: ACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCT...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGAGCCAAAGGATCATCTaGTTCACCTTTCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLSQRII*FTFPTA
Trigger: GGCTGTGGGAAAGGTGAATCAGATGATCCTTTGGCT...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACATCAGCCTCTATTCCATaGAAACAACCTACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTSASIP*KQPTEA
Trigger: GGCCTCAGTAGGTTGTTTGCATGGAATAGAGGCTGA...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATAAATGAGCATTTGGGATaGAAGGACCTAGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: QFSPSVPMATMKDLGNKINEHLG*KDLALE
Trigger: CTCCAAAGCTAGGTCCTTCCATCCCAAATGCTCATT...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGAAGGCCCAGGATGGTTaGAAAATCCTTCTCAACATC +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEEKAQDG*KILLNI
Trigger: GATGTTGAGAAGGATTTTCCAACCATCCTGGGCCTT...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAAGGAGAAGGCCCAGGATaGTTGGAAAATCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKGEGPG*LENPSQ
Trigger: TTGAGAAGGATTTTCCAACCATCCTGGGCCTTCTCC...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCTCACACCTACCTGTCTaGGCCAATTACTGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFSHLPV*ANYCSY
Trigger: GTAAGAACAGTAATTGGCCCAGACAGGTAGGTGTGA...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGATCTGGATGCACCTTTaGATGGGACACATTCACTCT +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEEIWMHL*MGHIHS
Trigger: AGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGAT...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCGAACAGGAATCTTTATaGTTGCTCTGGCTCAATCCA +
Preference number: 4 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLEQESL*LLWLNP
Trigger: TGGATTGAGCCAGAGCAACCATAAAGATTCCTGTTC...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594943.1
ENST00000602149.1
CDS-3UTR CCA 90 bp AGCTCACTCAGAGCAATGCCCTTGATTTTCAGGGCTCACATCAGCATTTTGCTTGTTTCTGACTCACTTTaGGTCATAGTGTCCATCATC +
Preference number: 4 (lower is better)
Translates to: SSLRAMPLIFRAHISILLVSDSL*VIVSII
Trigger: GATGATGGACACTATGACCCAAAGTGAGTCAGAAAC...AAGCAAAATGCTGATGTGAGCCCTGAAAATCAAGGGCATTGCTCTGAGTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCGCATTTTGCTTACTTTaGGAGCAGCTGCATTCATGT +
Preference number: 4 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLAFCLL*EQLHSC
Trigger: ACATGAATGCAGCTGCTCCCAAAGTAAGCAAAATGC...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTTCCATCCTCCCACCTTaGAATAAATGCTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLSILPP*NKCFLF
Trigger: GAAAAGAAAGCATTTATTCCAAGGTGGGAGGATGGA...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 72 bp GGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTaGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GYKNPDCSSWSK*GFVFASNSSAR
Trigger: TCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGTGGGAAAAGATTGTCTaGCAGAGGAATTTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEEWEKIV*QRNFAA
Trigger: AGCTGCAAAATTCCTCTGTCAGACAATCTTTTCCCA...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACAGTGTGGATTCTCTGCTaGTGGCCAACAAATGTTTGT +
Preference number: 4 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTVWILC*WPTNVC
Trigger: ACAAACATTTGTTGGCCATCAGCAGAGAATCCACAC...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGTTCCTTGAGCACATGTaGGTGACTGATGAAAACGGT +
Preference number: 4 (lower is better)
Translates to: WATRIQIALLGQSWVLSLFLEHM*VTDENG
Trigger: ACCGTTTTCATCAGTCACTCACATGTGCTCAAGGAA...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCAAATTTGATTCCTATTaGGACCTCTCTTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLKFDSY*DLSSWL
Trigger: AAGCCAGGAAGAGAGGTCTCAATAGGAATCAAATTT...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGCAAAGGAGACCTAGTTaGTTCAGACCTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLQRRPS*FRPGSL
Trigger: GAGAGATCCAGGTCTGAATCAACTAGGTCTCCTTTG...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGCTGACAGAGGAATTTTaGAGCTATTCAGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEELTEEF*SYSEAR
Trigger: CCTTGCTTCTGAATAGCTGCAAAATTCCTCTGTCAG...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGAAAACGGTGAGGATATaGCACATGGTAGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEEKTVRI*HMVVSV
Trigger: AACAGACACTACCATGTGGCATATCCTCACCGTTTT...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGACAGACATATCTGGATaGACCTTTGGATGGGACACA +
Preference number: 4 (lower is better)
Translates to: WATRIQIALLGQSWVLSLTDISG*TFGWDT
Trigger: TGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGT...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGAAGTTTAAGGAAAGGTaGTGTGCCTCGATGTGCACG +
Preference number: 4 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLKFKER*CASMCT
Trigger: CGTGCACATCGAGGCACAGCACCTTTCCTTAAACTT...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGGTTATATGTACCTTCTaGTGCCTGACAAGGGAATAT +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKVICTF*CLTREY
Trigger: ATATTCCCTTGTCAGGCACCAGAAGGTACATATAAC...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGGAAAAATCAGCTCTCTaGTGTCCTACAGTGAATAAG +
Preference number: 4 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKEKSAL*CPTVNK
Trigger: CTTATTCACTGTAGGACACCAGAGAGCTGATTTTTC...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGCTTCTTGGTCAAAGTTaGGTTTTGTCTTTGCCTCGA +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEELLGQS*VLSLPR
Trigger: TCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAG...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATAGAAGGTAAACCTCCATaGGCTACAAGAATCCAGATT +
Preference number: 4 (lower is better)
Translates to: QFSPSVPMATMKDLGNKIEGKPP*ATRIQI
Trigger: AATCTGGATTCTTGTAGCCCATGGAGGTTTACCTTC...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGGAAGGTAAACCTCCATaGGCTACAAGAATCCAGATT +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEEEGKPP*ATRIQI
Trigger: AATCTGGATTCTTGTAGCCCATGGAGGTTTACCTTC...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACATCACACCTACCTGTCTaGGCCAATTACTGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTSHLPV*ANYCSY
Trigger: GTAAGAACAGTAATTGGCCCAGACAGGTAGGTGTGA...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGGGATGCACCTTTGGATaGGACACATTCACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: WATRIQIALLGQSWVLSLGCTFG*DTFTLL
Trigger: AAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCC...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACAGGATGCACCTTTGGATaGGACACATTCACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTGCTFG*DTFTLL
Trigger: AAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCC...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 72 bp AGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTaGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: RIQIALLGQSWV*SLPRTVQQDGR
Trigger: TCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
3UTR CAA 72 bp CACGCATCCCCAAGTGGTTCTGAAAGCACGAGGTGTTaGAGAAGCAATGATTTAGATTTGTTAGAAAATGCC +
Preference number: 4 (lower is better)
Translates to: HASPSGSESTRC*RSNDLDLLENA
Trigger: GGCATTTTCTAACAAATCTAAATCATTGCTTCTCAAACACCTCGTGCTTTCAGAACCACTTGGGGATGCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCGTGACTGTTTGTATATaGAGGATTTCCCACATTCAC +
Preference number: 4 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFVTVCI*RISHIH
Trigger: GTGAATGTGGGAAATCCTTCATATACAAACAGTCAC...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAAGTGTGGATTCTATGGTaGTCAAGAAGTGACTGTTTG +
Preference number: 4 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKVWILW*SRSDCL
Trigger: CAAACAGTCACTTCTTGATCACCATAGAATCCACAC...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAATGGATTCTTTGGTGCTaGAGAAGTTTAACCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKWILWC*RSLTSR
Trigger: CCTTGAGGTTAAACTTCTTCAGCACCAAAGAATCCA...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATACACAACAGATCTGGGTaGATCACAAAAACCACATAT +
Preference number: 4 (lower is better)
Translates to: QFSPSVPMATMKDLGNKIHNRSG*ITKTTY
Trigger: ATATGTGGTTTTTGTGATTCACCCAGATCTGTTGTG...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGGTCTGGACCCTGTCATaGAGTCCTAGGCAAGATGGA +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGVWTLS*SPRQDG
Trigger: TCCATCTTGCCTAGGACTTCATGACAGGGTCCAGAC...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGACATTGACTAGAGACTaGGTGACAGGTTCTGATCCT +
Preference number: 4 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLTLTRD*VTGSDP
Trigger: AGGATCAGAACCTGTCACTCAGTCTCTAGTCAATGT...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGCCTTCTCAACATCTTTaGATGGGAAAAGATTGTCTG +
Preference number: 4 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEEPSQHL*MGKDCL
Trigger: CAGACAATCTTTTCCCATGCAAAGATGTTGAGAAGG...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGTTTCAACTAGTGATATaGAGATGTATGAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVFQLVI*RCMRVN
Trigger: ATTCACCCTCATACATCTGCATATCACTAGTTGAAA...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGAGGCATCTGGGTGCCTaGATGGTCATTAGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKRHLGA*MVISCF
Trigger: AAAACAACTAATGACCATGCAGGCACCCAGATGCCT...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTGTCCTTAATCAAGATTaGATAAGAAGGAAGCTGATT +
Preference number: 4 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLVLNQD*IRRKLI
Trigger: AATCAGCTTCCTTCTTATGCAATCTTGATTAAGGAC...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACAAAAACCATTTCCCACTaGCCACAGACGTATAAGGTT +
Preference number: 4 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTKTISH*PQTYKV
Trigger: AACCTTATACGTCTGTGGCCAGTGGGAAATGGTTTT...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACACCAGATTGCTCTTCTTaGTCAAAGTTGGGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTPDCSS*SKLGFV
Trigger: GACAAAACCCAACTTTGACCAAGAAGAGCAATCTGG...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCAGATTGCTCTTCTTaGTCAAAGTTGGGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: WATRIQIALLGQSWVLSLPDCSS*SKLGFV
Trigger: GACAAAACCCAACTTTGACCAAGAAGAGCAATCTGG...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGCTTCCTAGGAGACCTTaGAAACCAATAAAAATTAAG +
Preference number: 4 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVLPRRP*KPIKIK
Trigger: CTTAATTTTTATTGGTTTCCAAGGTCTCCTAGGAAG...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATACACATTCACTCTTCTTaGCCACAATCTTTTCTACTC +
Preference number: 4 (lower is better)
Translates to: QFSPSVPMATMKDLGNKIHIHSS*PQSFLL
Trigger: GAGTAGAAAAGATTGTGGCCAAGAAGAGTGAATGTG...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGGGGAATATCTTTTGTTaGAGGCTTTCCCACATTTAC +
Preference number: 4 (lower is better)
Translates to: WATRIQIALLGQSWVLSLGNIFC*RLSHIY
Trigger: GTAAATGTGGGAAAGCCTTCAACAAAAGATATTCCC...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR TCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGATCCCCAAGTGGTTCTaGAAGCACGAGGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGIPKWF*KHEVFE
Trigger: CTCAAACACCTCGTGCTTTCAGAACCACTTGGGGAT...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAACCTTCTCAACATCTTTaGATGGGAAAAGATTGTCTG +
Preference number: 4 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKPSQHL*MGKDCL
Trigger: CAGACAATCTTTTCCCATGCAAAGATGTTGAGAAGG...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR GCA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACACAAATAAACAATTCATaGAGGTCCCAGCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTQINNS*RSQHLS
Trigger: ACTCAAGTGCTGGGACCTGCATGAATTGTTTATTTG...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACAGAAAAATCAGCTCTCTaGTGTCCTACAGTGAATAAG +
Preference number: 4 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTEKSAL*CPTVNK
Trigger: CTTATTCACTGTAGGACACCAGAGAGCTGATTTTTC...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAACACATTCACTCTTCTTaGCCACAATCTTTTCTACTC +
Preference number: 4 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKHIHSS*PQSFLL
Trigger: GAGTAGAAAAGATTGTGGCCAAGAAGAGTGAATGTG...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCTCAAAACCCATTAACTaGGCAATAAACCATACAGAC +
Preference number: 4 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFSKPIN*AINHTD
Trigger: GTCTGTATGGTTTATTGCCCAGTTAATGGGTTTTGA...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGGGAGGTCATGGGCAGTaGGTGTTGTGTAGACAGATA +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGGGHGQ*VLCRQI
Trigger: TATCTGTCTACACAACACCCACTGCCCATGACCTCC...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGGCTCAATCCAGCTACTaGGGCCATAAGCGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGAQSSY*GHKRKV
Trigger: AACTTTTCGCTTATGGCCTCAGTAGCTGGATTGAGC...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGCAGCAGGAAAACATGTaGGCAAAGGACTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGQQENM*AKDSVS
Trigger: TGACACAGAGTCCTTTGCTCACATGTTTTCCTGCTG...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGGACATTTGTCCTCAGTaGCCCTCGGATATCTTCCTA +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGDICPQ*PSDIFL
Trigger: TAGGAAGATATCCGAGGGGCACTGAGGACAAATGTC...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGTACCAAGGCACATCCTaGACAGCCCTAACTCCATTA +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGYQGTS*TALTPL
Trigger: TAATGGAGTTAGGGCTGTGCAGGATGTGCCTTGGTA...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAATCAAAACCCATTAACTaGGCAATAAACCATACAGAC +
Preference number: 4 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKSKPIN*AINHTD
Trigger: GTCTGTATGGTTTATTGCCCAGTTAATGGGTTTTGA...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGATTTTCTTATGCTTCTaGAGGCTGAGAAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKIFLCF*RLRSPR
Trigger: TCTTGGACTTCTCAGCCTCCAGAAGCATAAGAAAAT...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGAACTCCATTAAACCTTaGGTCAATACAGCACATGTT +
Preference number: 4 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLNSIKP*VNTAHV
Trigger: AACATGTGCTGTATTGACTCAAGGTTTAATGGAGTT...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGCAAGCAGGAGACAGATaGCTTCCTCTTATCTCAACT +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGQAGDR*LPLIST
Trigger: AGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTTG...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACACTTCCTAGGAGACCTTaGAAACCAATAAAAATTAAG +
Preference number: 4 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTLPRRP*KPIKIK
Trigger: CTTAATTTTTATTGGTTTCCAAGGTCTCCTAGGAAG...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAAATTTTAAGTAGAGACTaGATTTCACCATGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKILSRD*ISPCWS
Trigger: TGACCAACATGGTGAAATCCAGTCTCTACTTAAAAT...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGATTTTAAGTAGAGACTaGATTTCACCATGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: WATRIQIALLGQSWVLSLILSRD*ISPCWS
Trigger: TGACCAACATGGTGAAATCCAGTCTCTACTTAAAAT...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CCA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGAAGGCTCCACCCTTGTaGCCTCATTTAATTTTAATT +
Preference number: 4 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKKAPPL*PHLILI
Trigger: AATTAAAATTAAATGAGGCCACAAGGGTGGAGCCTT...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGTTGTTTCATTTGGTTTaGGGTTGGAATCACGCATCC +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGLFHLV*GWNHAS
Trigger: GGATGCGTGATTCCAACCTCAAACCAAATGAAACAA...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGTGTAGGAAGGGAAATTaGCTTTCTCACTTACCAGAG +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGCRKGN*LSHLPE
Trigger: CTCTGGTAAGTGAGAAAGTCAATTTCCCTTCCTACA...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR GCA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGTCCATTCTTTTAATATaGCAGAGTACTTACTCTCTG +
Preference number: 4 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLSILLI*QSTYSL
Trigger: CAGAGAGTAAGTACTCTGGCATATTAAAAGAATGGA...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGAAAGAAAATGCCTTCTaGAGGAAGCAGCACACCTTT +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGKENAF*RKQHTF
Trigger: AAAGGTGTGCTGCTTCCTCCAGAAGGCATTTTCTTT...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGTCTGTTCCTTCTTCTTaGTTCAGGCTTCTGATTGTC +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGSVPSS*FRLLIV
Trigger: GACAATCAGAAGCCTGAACCAAGAAGAAGGAACAGA...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
3UTR CAA 72 bp ACATACAAGGGTTTCCTGGGACTTAGTGGCATTGTTTaGATTTTGTTGTGTTGTGATTGCAGACTTCTATTT +
Preference number: 4 (lower is better)
Translates to: TYKGFLGLSGIV*ILLCCDCRLLF
Trigger: AAATAGAAGTCTGCAATCACAACACAACAAAATCAAAACAATGCCACTAAGTCCCAGGAAACCCTTGTATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR TCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGTCAAATGGCATGGTTTaGTACCCTGATAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGSNGMV*YPDKAI
Trigger: AATGGCTTTATCAGGGTATCAAACCATGCCATTTGA...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CCA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGATGTCATGGATTGGGTaGTTTAAACAACGAGAGTTT +
Preference number: 4 (lower is better)
Translates to: KNEGNLGINKQDVITYCGMSWIG*FKQREF
Trigger: AAACTCTCGTTGTTTAAACCACCCAATCCATGACAT...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS CCA 90 bp TCTGCGGGCGGACACCACCTCCACCGGTTTCCGGCTCCAGTTACCTaGCCCGGACCCAGCGAGCCGGAAACGCCCAGCCCGCGGACGCGC +
Preference number: 5 (lower is better)
Translates to: SAGGHHLHRFPAPVT*PGPSEPETPSPRTR
Trigger: GCGCGTCCGCGGGCTGGGCGTTTCCGGCTCGCTGGGTCCGGGCCAGGTAACTGGAGCCGGAAACCGGTGGAGGTGGTGTCCGCCCGCAGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS GCA 90 bp GGGGCGGGGCCTGGAAAGGCGGGCGGTAAAGCCCGGGATCCGGCGTaGGTGCGGTGGCAAATCGCTGGGCGACGCTCAGACCGAGACCAG +
Preference number: 5 (lower is better)
Translates to: GAGPGKAGGKARDPA*VRWQIAGRRSDRDQ
Trigger: CTGGTCTCGGTCTGAGCGTCGCCCAGCGATTTGCCACCGCACGCACGCCGGATCCCGGGCTTTACCGCCCGCCTTTCCAGGCCCCGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240719.7
ENST00000376233.8
ENST00000594943.1
ENST00000602149.1
CDS GCA 90 bp CGGGGCCTGGAAAGGCGGGCGGTAAAGCCCGGGATCCGGCGTGCGTaGGGTGGCAAATCGCTGGGCGACGCTCAGACCGAGACCAGGCAA +
Preference number: 5 (lower is better)
Translates to: RGLERRAVKPGIRRA*GGKSLGDAQTETRQ
Trigger: TTGCCTGGTCTCGGTCTGAGCGTCGCCCAGCGATTTGCCACCGCACGCACGCCGGATCCCGGGCTTTACCGCCCGCCTTTCCAGGCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240719.7
ENST00000376233.8
ENST00000594943.1
ENST00000602149.1
CDS CCA 90 bp CCTGGAAAGGCGGGCGGTAAAGCCCGGGATCCGGCGTGCGTGCGGTaGCAAATCGCTGGGCGACGCTCAGACCGAGACCAGGCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: PGKAGGKARDPACVR*QIAGRRSDRDQASS
Trigger: GGAGCTTGCCTGGTCTCGGTCTGAGCGTCGCCCAGCGATTTGCCACCGCACGCACGCCGGATCCCGGGCTTTACCGCCCGCCTTTCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240719.7
ENST00000376233.8
ENST00000594943.1
ENST00000602149.1
CDS GCA 90 bp GCAAATCGCTGGGCGACGCTCAGACCGAGACCAGGCAAGCTCCTCTaGGGGCGGACACCACCTCCACCGGTTTCCGGCTCCAGTTACCTG +
Preference number: 5 (lower is better)
Translates to: ANRWATLRPRPGKLL*GRTPPPPVSGSSYL
Trigger: CAGGTAACTGGAGCCGGAAACCGGTGGAGGTGGTGTCCGCCCGCAGAGGAGCTTGCCTGGTCTCGGTCTGAGCGTCGCCCAGCGATTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCAGTATCTGCCTCCCCTTaGAGCCCTGCACGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSVSASP*SPARKS
Trigger: TGACTTCCGTGCAGGGCTCAAAGGGGAGGCAGATAC...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCCTGGGTGCTGCAGCCTaGACTGGGGCAGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLLGAAA*TGAAGP
Trigger: GGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAG...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTGTTCCCAAACCAGAGTaGGTCCACCTGCTAGAGCAT +
Preference number: 5 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLVPKPE*VHLLEH
Trigger: ATGCTCTAGCAGGTGGACCAACTCTGGTTTGGGAAC...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594943.1
ENST00000602149.1
CDS-3UTR CAA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCAAAGGTGTCGGCAAATTaGATTCCTATTGAGACCTCT +
Preference number: 5 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSKVSAN*IPIETS
Trigger: AGAGGTCTCAATAGGAATCAAATTTGCCGACACCTT...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACAGGCACGAGAATCCCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHRHENP*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGGGATTCTCGTGCCT...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTCTGCCCACCTTTCTCTaGACAGACCTTTCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLLPTFL*TDLSVP
Trigger: GGGAACAGAAAGGTCTGTCAAGAGAAAGGTGGGCAG...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACTTTCCGGGGGCCTGGTaGTTTCTGACTCACTTTGGG +
Preference number: 5 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHFPGAW*FLTHFG
Trigger: CCCAAAGTGAGTCAGAAACAACCAGGCCCCCGGAAA...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp GGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCCATGGCTATGGAAGGACCTAGCTTaGGAGTCCTGGCCTGTGACA +
Preference number: 5 (lower is better)
Translates to: GLTTSDLPTNSVLQCPWLWKDLA*ESWPVT
Trigger: TGTCACAGGCCAGGACTCCAAAGCTAGGTCCTTCCA...TAGCCATGGGCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGGTGGGTGGTCTGGTGTaGGAGAAGGCCCAGGATGGT +
Preference number: 5 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKVGGLV*EKAQDG
Trigger: ACCATCCTGGGCCTTCTCCAACACCAGACCACCCAC...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCAGGCAGGAGGATCACTaGAGGCCAGGCACTCGAGAC +
Preference number: 5 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLRQEDH*RPGTRD
Trigger: GTCTCGAGTGCCTGGCCTCAAGTGATCCTCCTGCCT...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp CATAGGGATGCTGGGTGCTGCAGCCTTGACTGGGGCAGCAGGCCCCCATGTTCAAAGAAGTTATTAGAATaGATGGCACACTCTGAGTTC +
Preference number: 5 (lower is better)
Translates to: HRDAGCCSLDWGSRPPCSKKLLE*MAHSEF
Trigger: GAACTCAGAGTGTGCCATCAATTCTAATAACTTCTT...TGAACATGGGGGCCTGCTGCCCCAGTCAAGGCTGCAGCACCCAGCATCCCTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS GCA 90 bp GTCTTTGTTGAAAGGTCTCCCTGCTTCTATGTGCATACTCTTGTCTaGTGTGGGTGGTCTGGTGTTGGAGAAGGCCCAGGATGGTTGGAA +
Preference number: 5 (lower is better)
Translates to: VFVERSPCFYVHTLV*CGWSGVGEGPGWLE
Trigger: TTCCAACCATCCTGGGCCTTCTCCAACACCAGACCACCCACAGCAGACAAGAGTATGCACATAGAAGCAGGGAGACCTTTCAACAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS CCA 90 bp GAAAGGTCTCCCTGCTTCTATGTGCATACTCTTGTCTGCTGTGGGTaGTCTGGTGTTGGAGAAGGCCCAGGATGGTTGGAAAATCCTTCT +
Preference number: 5 (lower is better)
Translates to: ERSPCFYVHTLVCCG*SGVGEGPGWLENPS
Trigger: AGAAGGATTTTCCAACCATCCTGGGCCTTCTCCAACACCAGACCACCCACAGCAGACAAGAGTATGCACATAGAAGCAGGGAGACCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATAGTGGGTGGTCTGGTGTaGGAGAAGGCCCAGGATGGT +
Preference number: 5 (lower is better)
Translates to: QFSPSVPMATMKDLGNKIVGGLV*EKAQDG
Trigger: ACCATCCTGGGCCTTCTCCAACACCAGACCACCCAC...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGCAGCCCATTTCCCTCTaGGGTAATGTGGGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVQPISL*GNVGEG
Trigger: TCCCTCTCCCACATTACCCAAGAGGGAAATGGGCTG...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTACCTCTCTTCCTGGCTaGCAGATGGCTGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLTSLPG*QMADLL
Trigger: CAGCAAGTCAGCCATCTGCAAGCCAGGAAGAGAGGT...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTCTCTGTTCCTTCTTCTaGGTTCAGGCTTCTGATTGT +
Preference number: 5 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLLCSFF*VQASDC
Trigger: ACAATCAGAAGCCTGAACCAAGAAGAAGGAACAGAG...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTCTCGTGGGATTGCCATaGTTTGTGTCATCTTCAACA +
Preference number: 5 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLLVGLP*FVSSST
Trigger: TGTTGAAGATGACACAAACAATGGCAATCCCACGAG...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTATAGTCCTCGTGGGATaGCCATTGTTTGTGTCATCT +
Preference number: 5 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLIVLVG*PLFVSS
Trigger: AGATGACACAAACAATGGCAATCCCACGAGGACTAT...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGAGTTGGGTTTTGTCTTaGCCTCGAACAGTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: QVPALEFVTNASSQGDLWSWVLS*PRTVQQ
Trigger: TTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACT...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGTCTTCTTGGTCAAAGTaGGGTTTTGTCTTTGCCTCG +
Preference number: 5 (lower is better)
Translates to: QVPALEFVTNASSQGDLWSSWSK*GFVFAS
Trigger: CGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGA...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp CTCACTTTGGGTCATAGTGTCCATCATCAGGTGAGCACTGAGCCACACAATTATTTTCCGGGGGCCTGGTaGTTTCTGACTCACTTTGGG +
Preference number: 5 (lower is better)
Translates to: LTLGHSVHHQVSTEPHNYFPGAW*FLTHFG
Trigger: CCCAAAGTGAGTCAGAAACAACCAGGCCCCCGGAAA...ATAATTGTGTGGCTCAGTGCTCACCTGATGATGGACACTATGACCCAAAGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594943.1
CDS-3UTR CAA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTCCTATTCTATTTCTTTaGCTATCAACAGGGCATCGG +
Preference number: 5 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLPILFL*LSTGHR
Trigger: CCGATGCCCTGTTGATAGCAAAAGAAATAGAATAGG...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594943.1
ENST00000602149.1
CDS-3UTR CAA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACTCATTTGGTTTGAGGTaGGAATCACGCATCCCCAAG +
Preference number: 5 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHSFGLR*ESRIPK
Trigger: CTTGGGGATGCGTGATTCCAACCTCAAACCAAATGA...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp CTACCTGTGCAGGTAAGCAGCCACCAGCTGGTCATGTGGAGTCATGGCAGTCTTGATATCCATGCTCTGTaGATCCAGGAGGTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: LPVQVSSHQLVMWSHGSLDIHAL*IQEVFL
Trigger: TAAAAACACCTCCTGGATCAACAGAGCATGGATATC...AAGACTGCCATGACTCCACATGACCAGCTGGTGGCTGCTTACCTGCACAGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGGCCTTCCGCAGTGCATaGTGTCCCTGGGTACCCGAG +
Preference number: 5 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKAFRSA*CPWVPE
Trigger: CTCGGGTACCCAGGGACACAATGCACTGCGGAAGGC...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS TCA 90 bp GCACTGAGCCACACAATTATTCAGAGACACAGGTACCTTTTGCTGTaGACAGGAATCTTTATGGTTGCTCTGGCTCAATCCAGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: ALSHTIIQRHRYLLL*TGIFMVALAQSSCG
Trigger: GCCGCAGCTGGATTGAGCCAGAGCAACCATAAAGATTCCTGTTCACAGCAAAAGGTACCTGTGTCTCTGAATAATTGTGTGGCTCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594943.1
CDS GCA 90 bp CTCACATTTGTAACGTCTTTGTTGAAAGGTCTCCCTGCTTCTATGTaGATACTCTTGTCTGCTGTGGGTGGTCTGGTGTTGGAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LTFVTSLLKGLPASM*ILLSAVGGLVLEKA
Trigger: GGCCTTCTCCAACACCAGACCACCCACAGCAGACAAGAGTATGCACATAGAAGCAGGGAGACCTTTCAACAAAGACGTTACAAATGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATATGGAAGGACCTAGCTTaGGAGTCCTGGCCTGTGACA +
Preference number: 5 (lower is better)
Translates to: QFSPSVPMATMKDLGNKIWKDLA*ESWPVT
Trigger: TGTCACAGGCCAGGACTCCAAAGCTAGGTCCTTCCA...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCTCTATGTGCATACTCTaGTCTGCTGTGGGTGGTCTG +
Preference number: 5 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLASMCIL*SAVGGL
Trigger: CAGACCACCCACAGCAGACAAGAGTATGCACATAGA...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCCAGCCCATTTCCCTCTaGGGTAATGTGGGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFQPISL*GNVGEG
Trigger: TCCCTCTCCCACATTACCCAAGAGGGAAATGGGCTG...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTCTGACTGGTCTCCCTTaGTCTGCATCAGAGATTGTC +
Preference number: 5 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLLTGLP*SASEIV
Trigger: GACAATCTCTGATGCAGACAAAGGGAGACCAGTCAG...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp TGCCTTCTGGAGGAAGCAGCACACCTTTGCCGTGTCCCATGGCTGTCAAAGTGTAGGCCAGATTTATGTTaGACTTTACCCAAACATCTC +
Preference number: 5 (lower is better)
Translates to: CLLEEAAHLCRVPWLSKCRPDLC*TLPKHL
Trigger: GAGATGTTTGGGTAAAGTCAAACATAAATCTGGCCT...ACACTTTGACAGCCATGGGACACGGCAAAGGTGTGCTGCTTCCTCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS CCA 90 bp ACTCTTGTCTGCTGTGGGTGGTCTGGTGTTGGAGAAGGCCCAGGATaGTTGGAAAATCCTTCTCAACATCTTTGCATGGGAAAAGATTGT +
Preference number: 5 (lower is better)
Translates to: TLVCCGWSGVGEGPG*LENPSQHLCMGKDC
Trigger: ACAATCTTTTCCCATGCAAAGATGTTGAGAAGGATTTTCCAACCATCCTGGGCCTTCTCCAACACCAGACCACCCACAGCAGACAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCTACACATCCCAACAATaGCTAGGGCTCTTCTGTTAT +
Preference number: 5 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCYTSQQ*LGLFCY
Trigger: ATAACAGAAGAGCCCTAGCAATTGTTGGGATGTGTA...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TTCAGAGACACAGGTACCTTTTGCTGTGAACAGGAATCTTTATGGTTGCTCTGGGTTCCCAAACCAGAGTaGGTCCACCTGCTAGAGCAT +
Preference number: 5 (lower is better)
Translates to: FRDTGTFCCEQESLWLLWVPKPE*VHLLEH
Trigger: ATGCTCTAGCAGGTGGACCAACTCTGGTTTGGGAAC...CCAGAGCAACCATAAAGATTCCTGTTCACAGCAAAAGGTACCTGTGTCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594943.1
CDS-3UTR CAA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCCAGCTACTCAGGAGTTaGAAGCAGGAGAATCGCTTG +
Preference number: 5 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLQLLRS*KQENRL
Trigger: CAAGCGATTCTCCTGCTTCAAACTCCTGAGTAGCTG...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCTCTATGTGCATACTCTaGTCTGCTGTGGGTGGTCTG +
Preference number: 5 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFSMCIL*SAVGGL
Trigger: CAGACCACCCACAGCAGACAAGAGTATGCACATAGA...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp GGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCCCATGGCTATTTGTAACGTCTTTGTaGAAAGGTCTCCCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: GLTTSDLPTNSVLQCPWLFVTSL*KGLPAS
Trigger: AGAAGCAGGGAGACCTTTCAACAAAGACGTTACAAA...TAGCCATGGGCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp CAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGTCAAGAAGTGACTGTTaGTATATGAAGGATTTCCCA +
Preference number: 5 (lower is better)
Translates to: QVPALEFVTNASSQGDLWSRSDC*YMKDFP
Trigger: TGGGAAATCCTTCATATACAAACAGTCACTTCTTGA...CCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTTAAGAAGTGTTTGTTaGGAGATGAAGGCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: MQVPALEFVTNASSQGDLLRSVC*EMKAFP
Trigger: TGGGAAAGCCTTCATCTCCAAACAAACACTTCTTAA...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp ATGCAGGTCCCAGCACTTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCGTGAATTTCTGTCTGTaGGATCCCTTGAAAAATCAG +
Preference number: 5 (lower is better)
Translates to: MQVPALEFVTNASSQGDLVNFCL*DPLKNQ
Trigger: CTGATTTTTCAAGGGATCCAACAGACAGAAATTCAC...GAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGTCCCAGCACTTGAGTTaGTCACAAATGCCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKSQHLS*SQMPLL
Trigger: GAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGA...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCTGCAGGTCCCAGCACTaGAGTTTGTCACAAATGCCT +
Preference number: 5 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFCRSQH*SLSQMP
Trigger: AGGCATTTGTGACAAACTCAAGTGCTGGGACCTGCA...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTAGCATTTTGCTTACTTaGGGAGCAGCTGCATTCATG +
Preference number: 5 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLSILLT*GAAAFM
Trigger: CATGAATGCAGCTGCTCCCAAAGTAAGCAAAATGCT...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCTTGCAGATGGCTGACTaGCTGTGTTCTTACAAGGTG +
Preference number: 5 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLLQMAD*LCSYKV
Trigger: CACCTTGTAAGAACACAGCAAGTCAGCCATCTGCAA...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCGCCATCAAGGATGTCTaGGTTCTCTGTTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLAIKDV*VLCSFF
Trigger: GAAGAAGGAACAGAGAACCAAGACATCCTTGATGGC...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGCAGGGAGCTCAGCTCTaGGGAGAGCCAAAGGATCAT +
Preference number: 5 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKQGAQL*GEPKDH
Trigger: ATGATCCTTTGGCTCTCCCAAGAGCTGAGCTCCCTG...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTTCAGGCACAATTGCATaGTCAAAAGGCAGTATCTGC +
Preference number: 5 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLSGTIA*SKGSIC
Trigger: GCAGATACTGCCTTTTGACAATGCAATTGTGCCTGA...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCTCTGACAGAGGAATTTaGCAGCTATTCAGAAGCAAG +
Preference number: 5 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLASDRGI*QLFRSK
Trigger: CTTGCTTCTGAATAGCTGCAAAATTCCTCTGTCAGA...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATAGAAGGCCCAGGATGGTaGGAAAATCCTTCTCAACAT +
Preference number: 5 (lower is better)
Translates to: QFSPSVPMATMKDLGNKIEGPGW*ENPSQH
Trigger: ATGTTGAGAAGGATTTTCCAACCATCCTGGGCCTTC...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp GCCCCAGTAGGTCTTACAACCAGTGACCTACCTACCAATTCAGTCCTTCAGTGCTCAAGAAGTGACTGTTaGTATATGAAGGATTTCCCA +
Preference number: 5 (lower is better)
Translates to: APVGLTTSDLPTNSVLQCSRSDC*YMKDFP
Trigger: TGGGAAATCCTTCATATACAAACAGTCACTTCTTGA...GCACTGAAGGACTGAATTGGTAGGTAGGTCACTGGTTGTAAGACCTACTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp GAGCACATACATCAGCACATGGTAAGACAGCCCATTTCCCTCTTGGGTAATGTGCATCTACCTCTCCTTTaGGAAAACCAGACTATAGGA +
Preference number: 5 (lower is better)
Translates to: EHIHQHMVRQPISLLGNVHLPLL*ENQTIG
Trigger: TCCTATAGTCTGGTTTTCCAAAAGGAGAGGTAGATG...CACATTACCCAAGAGGGAAATGGGCTGTCTTACCATGTGCTGATGTATGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACCTGTCTTTTATCTCCTaGGCTGCCATAATAAAATGT +
Preference number: 5 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHLSFIS*AAIIKC
Trigger: ACATTTTATTATGGCAGCCAAGGAGATAAAAGACAG...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACAGCAATGATTTAGATTaGTTAGAAAATGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHSNDLD*LENASW
Trigger: CCAGGAGGCATTTTCTAACAAATCTAAATCATTGCT...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCAATGAGAATCCAGCTTaGGTCACCTGCCTAATGAAG +
Preference number: 5 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLNENPA*VTCLMK
Trigger: CTTCATTAGGCAGGTGACCAAAGCTGGATTCTCATT...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp ACCCGAGACGGGAGAATGGCGATGACTTTTACCAAGCATACTGCCTGCAAACACGGCATTGTTTTGATTTaGTTGTGTTGTGATTGCAGA +
Preference number: 5 (lower is better)
Translates to: TRDGRMAMTFTKHTACKHGIVLI*LCCDCR
Trigger: TCTGCAATCACAACACAACAAAATCAAAACAATGCC...GTGTTTGCAGGCAGTATGCTTGGTAAAAGTCATCGCCATTCTCCCGTCTCGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS CCA 90 bp TTATTCAGAGACACAGGTACCTTTTGCTGTGAACAGGAATCTTTATaGTTGCTCTGGCTCAATCCAGCTACTGAGGCCATAAGCGAAAAG +
Preference number: 5 (lower is better)
Translates to: LFRDTGTFCCEQESL*LLWLNPATEAISEK
Trigger: CTTTTCGCTTATGGCCTCAGTAGCTGGATTGAGCCAGAGCAACCATAAAGATTCCTGTTCACAGCAAAAGGTACCTGTGTCTCTGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGACATTTGTAACGTCTTaGTTGAAAGGTCTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKTFVTS*LKGLPA
Trigger: AGCAGGGAGACCTTTCAACAAAGACGTTACAAATGT...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGGGTCAAAGTTGGGTTTaGTCTTTGCCTCGAACAGTT +
Preference number: 5 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEEGQSWV*SLPRTV
Trigger: AACTGTTCGAGGCAAAGACAAAACCCAACTTTGACC...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATATCTTCTTGGTCAAAGTaGGGTTTTGTCTTTGCCTCG +
Preference number: 5 (lower is better)
Translates to: QFSPSVPMATMKDLGNKISSWSK*GFVFAS
Trigger: CGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGA...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACATCCCAGCACTTGAGTTaGTCACAAATGCCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTSQHLS*SQMPLL
Trigger: GAGAAGAGGCATTTGTGACAAACTCAAGTGCTGGGA...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACATATCTGGATGCACCTTaGGATGGGACACATTCACTC +
Preference number: 5 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTYLDAP*DGTHSL
Trigger: GAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATA...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGCATCTACCTCTCCTTTaGGAAAACCAGACTATAGGA +
Preference number: 5 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKHLPLL*ENQTIG
Trigger: TCCTATAGTCTGGTTTTCCAAAAGGAGAGGTAGATG...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TTGGGTCATAGTGTCCATCATCAGGTGAGCACTGAGCCACACAATTATTCAGAGCCTATTCTATTTCTTTaGCTATCAACAGGGCATCGG +
Preference number: 5 (lower is better)
Translates to: LGHSVHHQVSTEPHNYSEPILFL*LSTGHR
Trigger: CCGATGCCCTGTTGATAGCAAAAGAAATAGAATAGG...CTCTGAATAATTGTGTGGCTCAGTGCTCACCTGATGATGGACACTATGACCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594943.1
CDS-3UTR CAA 90 bp TTGGTCTTCTATACAGAATCCTCCTGTCTTTTACTCACCACATCTAGTGGAAAGCTCAGAGCAATGCCCTaGATTTTCAGGGCTCACATC +
Preference number: 5 (lower is better)
Translates to: LVFYTESSCLLLTTSSGKLRAMP*IFRAHI
Trigger: GATGTGAGCCCTGAAAATCAAGGGCATTGCTCTGAG...CTTTCCACTAGATGTGGTGAGTAAAAGACAGGAGGATTCTGTATAGAAGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp CCTCAAATGGCATGGTTTGATACCCTGATAAAGCCATTCCTTTTACTTTCTCTGGCCCAACAGTGGGATTaGTGCCTGTCTTTTATCTCC +
Preference number: 5 (lower is better)
Translates to: PQMAWFDTLIKPFLLLSLAQQWD*CLSFIS
Trigger: GGAGATAAAAGACAGGCACAAATCCCACTGTTGGGC...CAGAGAAAGTAAAAGGAATGGCTTTATCAGGGTATCAAACCATGCCATTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp AAGCAGGAGACAGATGCCTTCCTCTTATCTCAACTGCAAAGAGGCCTTCCTCTTGAAAGCACGAGGTGTTaGAGAAGCAATGATTTAGAT +
Preference number: 5 (lower is better)
Translates to: KQETDAFLLSQLQRGLPLESTRC*RSNDLD
Trigger: ATCTAAATCATTGCTTCTCAAACACCTCGTGCTTTC...AAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCTCCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGAAGCCTGAGGTGTGGTaGGCTCCAGGCTTGTTCGGT +
Preference number: 5 (lower is better)
Translates to: KNEGNLGINKQDVITYCGKPEVW*APGLFG
Trigger: ACCGAACAAGCCTGGAGCCAACCACACCTCAGGCTT...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp TCTTCAGATAATGTGAGGGCACCACTGCCTCTGAATTTCTGTGTGAAACTGCTCTTCTCTCAGGCACAATaGCATTGTCAAAAGGCAGTA +
Preference number: 5 (lower is better)
Translates to: SSDNVRAPLPLNFCVKLLFSQAQ*HCQKAV
Trigger: TACTGCCTTTTGACAATGCAATTGTGCCTGAGAGAA...GAGCAGTTTCACACAGAAATTCAGAGGCAGTGGTGCCCTCACATTATCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS TCA 90 bp TGTCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTaGATAAGACAATTACACATCCCAACAATTGCTAGGGCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: CLLDPLKNQLSGVLQ*IRQLHIPTIARALL
Trigger: CAGAAGAGCCCTAGCAATTGTTGGGATGTGTAATTGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATATCTGACAGAGGAATTTaGCAGCTATTCAGAAGCAAG +
Preference number: 5 (lower is better)
Translates to: QFSPSVPMATMKDLGNKISDRGI*QLFRSK
Trigger: CTTGCTTCTGAATAGCTGCAAAATTCCTCTGTCAGA...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp ACACAGACATATCTGGATGCACCTTTGGATGGGACACATTCACTCTTCTTGGCCATTGCACTCACAAAGTaGTTCTCTAGTATGGATTCT +
Preference number: 5 (lower is better)
Translates to: TQTYLDAPLDGTHSLFLAIALTK*FSSMDS
Trigger: AGAATCCATACTAGAGAACAACTTTGTGAGTGCAAT...GGCCAAGAAGAGTGAATGTGTCCCATCCAAAGGTGCATCCAGATATGTCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCAGCAAGATGGAAGAGTACACATCCCAACAATaGCTAGGGCTCTTCTGTTAT +
Preference number: 5 (lower is better)
Translates to: LVKVGFCLCLEQFSKMEEYTSQQ*LGLFCY
Trigger: ATAACAGAAGAGCCCTAGCAATTGTTGGGATGTGTA...CTCTTCCATCTTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACAAGTTGGGTTTTGTCTTaGCCTCGAACAGTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTSWVLS*PRTVQQ
Trigger: TTGCTGAACTGTTCGAGGCAAAGACAAAACCCAACT...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TGGGCTACAAGAATCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGGGTCAAAGTTGGGTTTaGTCTTTGCCTCGAACAGTT +
Preference number: 5 (lower is better)
Translates to: WATRIQIALLGQSWVLSLGQSWV*SLPRTV
Trigger: AACTGTTCGAGGCAAAGACAAAACCCAACTTTGACC...CAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGATTCTTGTAGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCTCCAGATTGCTCTTCTaGGTCAAAGTTGGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFSRLLF*VKVGFC
Trigger: ACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp GGTGAGGATATGCCACATGGTAGTGTCTGTTGTAACACTGGGCAGATTAGAAAGACACATTCACTCTTCTaGGCCACAATCTTTTCTACT +
Preference number: 5 (lower is better)
Translates to: GEDMPHGSVCCNTGQIRKTHSLF*ATIFST
Trigger: AGTAGAAAAGATTGTGGCCAAGAAGAGTGAATGTGT...CTTTCTAATCTGCCCAGTGTTACAACAGACACTACCATGTGGCATATCCTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp AGCTCACTCAGAGCAATGCCCTTGATTTTCAGGGCTCACATCAGCATTTTGCTTTTTGTTTCATTTGGTTaGAGGTTGGAATCACGCATC +
Preference number: 5 (lower is better)
Translates to: SSLRAMPLIFRAHISILLFVSFG*RLESRI
Trigger: GATGCGTGATTCCAACCTCAAACCAAATGAAACAAA...AAGCAAAATGCTGATGTGAGCCCTGAAAATCAAGGGCATTGCTCTGAGTGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACATTTGTAACGTCTTTGTaGAAAGGTCTCCCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTFVTSL*KGLPAS
Trigger: AGAAGCAGGGAGACCTTTCAACAAAGACGTTACAAA...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAAACATTTGTAACGTCTTaGTTGAAAGGTCTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKTFVTS*LKGLPA
Trigger: AGCAGGGAGACCTTTCAACAAAGACGTTACAAATGT...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp CAATTCAGTCCTTCAGTGCCCATGGCTACAATGAAGGACCTGGGAAATAAGATAGTGAATTTCTGTCTGTaGGATCCCTTGAAAAATCAG +
Preference number: 5 (lower is better)
Translates to: QFSPSVPMATMKDLGNKIVNFCL*DPLKNQ
Trigger: CTGATTTTTCAAGGGATCCAACAGACAGAAATTCAC...TATCTTATTTCCCAGGTCCTTCATTGTAGCCATGGGCACTGAAGGACTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACATCCAGATTGCTCTTCTaGGTCAAAGTTGGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTSRLLF*VKVGFC
Trigger: ACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TTGAGTTTGTCACAAATGCCTCTTCTCAGGGAGACCTCTGGACCTACAAATAAATCCTTCTCAACATCTTaGCATGGGAAAAGATTGTCT +
Preference number: 5 (lower is better)
Translates to: LSLSQMPLLRETSGPTNKSFSTS*HGKRLS
Trigger: AGACAATCTTTTCCCATGCAAAGATGTTGAGAAGGA...TTTATTTGTAGGTCCAGAGGTCTCCCTGAGAAGAGGCATTTGTGACAAACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACATTAAGAAGTGTTTGTTaGGAGATGAAGGCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTLRSVC*EMKAFP
Trigger: TGGGAAAGCCTTCATCTCCAAACAAACACTTCTTAA...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TCCAGATTGCTCTTCTTGGTCAAAGTTGGGTTTTGTCTTTGCCTCGAACAGTTCATTGCACTCACAAAGTaGTTCTCTAGTATGGATTCT +
Preference number: 5 (lower is better)
Translates to: SRLLFLVKVGFCLCLEQFIALTK*FSSMDS
Trigger: AGAATCCATACTAGAGAACAACTTTGTGAGTGCAAT...GAACTGTTCGAGGCAAAGACAAAACCCAACTTTGACCAAGAAGAGCAATCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp TCTGTTGGATCCCTTGAAAAATCAGCTCTCTGGTGTCCTACAGTGAATAAGACAACACATTCACTCTTCTaGGCCACAATCTTTTCTACT +
Preference number: 5 (lower is better)
Translates to: SVGSLEKSALWCPTVNKTTHSLF*ATIFST
Trigger: AGTAGAAAAGATTGTGGCCAAGAAGAGTGAATGTGT...TGTCTTATTCACTGTAGGACACCAGAGAGCTGATTTTTCAAGGGATCCAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS-3UTR CAA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGCATGGGCAGTGGGTGTaGTGTAGACAGATAGCACTA +
Preference number: 5 (lower is better)
Translates to: KNEGNLGINKQDVITYCGHGQWV*CRQIAL
Trigger: TAGTGCTATCTGTCTACACAACACCCACTGCCCATG...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS-3UTR CAA 90 bp AAAAATGAGGGGAATTTAGGAATAAATAAGCAGGATGTCATAACCTATTGTGGGTGTTTCTGTGGATCCTaGTACCTCAGTCATTGGTCT +
Preference number: 5 (lower is better)
Translates to: KNEGNLGINKQDVITYCGCFCGS*YLSHWS
Trigger: AGACCAATGACTGAGGTACAAGGATCCACAGAAACA...CCCACAATAGGTTATGACATCCTGCTTATTTATTCCTAAATTCCCCTCATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS CCA 72 bp GGACACCACCTCCACCGGTTTCCGGCTCCAGTTACCTaGCCCGGACCCAGCGAGCCGGAAACGCCCAGCCCG +
Preference number: 6 (lower is better)
Translates to: GHHLHRFPAPVT*PGPSEPETPSP
Trigger: CGGGCTGGGCGTTTCCGGCTCGCTGGGTCCGGGCCAGGTAACTGGAGCCGGAAACCGGTGGAGGTGGTGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS CCA 72 bp GCGGGCGGTAAAGCCCGGGATCCGGCGTGCGTGCGGTaGCAAATCGCTGGGCGACGCTCAGACCGAGACCAG +
Preference number: 6 (lower is better)
Translates to: AGGKARDPACVR*QIAGRRSDRDQ
Trigger: CTGGTCTCGGTCTGAGCGTCGCCCAGCGATTTGCCACCGCACGCACGCCGGATCCCGGGCTTTACCGCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240719.7
ENST00000376233.8
ENST00000594943.1
ENST00000602149.1
CDS GCA 72 bp GAAAGGCGGGCGGTAAAGCCCGGGATCCGGCGTGCGTaGGGTGGCAAATCGCTGGGCGACGCTCAGACCGAG +
Preference number: 6 (lower is better)
Translates to: ERRAVKPGIRRA*GGKSLGDAQTE
Trigger: CTCGGTCTGAGCGTCGCCCAGCGATTTGCCACCGCACGCACGCCGGATCCCGGGCTTTACCGCCCGCCTTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240719.7
ENST00000376233.8
ENST00000594943.1
ENST00000602149.1
CDS GCA 72 bp CCTGGAAAGGCGGGCGGTAAAGCCCGGGATCCGGCGTaGGTGCGGTGGCAAATCGCTGGGCGACGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: PGKAGGKARDPA*VRWQIAGRRSD
Trigger: GTCTGAGCGTCGCCCAGCGATTTGCCACCGCACGCACGCCGGATCCCGGGCTTTACCGCCCGCCTTTCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240719.7
ENST00000376233.8
ENST00000594943.1
ENST00000602149.1
CDS CCA 72 bp AGCCCGGGATCCGGCGTGCGTGCGGTGGCAAATCGCTaGGCGACGCTCAGACCGAGACCAGGCAAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SPGSGVRAVANR*ATLRPRPGKLL
Trigger: GAGGAGCTTGCCTGGTCTCGGTCTGAGCGTCGCCCAGCGATTTGCCACCGCACGCACGCCGGATCCCGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240719.7
ENST00000376233.8
ENST00000594943.1
ENST00000602149.1
CDS GCA 72 bp ACAGGAATCTTTATGGTTGCTCTGGCTCAATCCAGCTaGGGCGTAATCACTAGCGCTGCCTCGGCCATGGGA +
Preference number: 6 (lower is better)
Translates to: TGIFMVALAQSS*GVITSAASAMG
Trigger: TCCCATGGCCGAGGCAGCGCTAGTGATTACGCCGCAGCTGGATTGAGCCAGAGCAACCATAAAGATTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594943.1
CDS CCA 72 bp CCCTGCTTCTATGTGCATACTCTTGTCTGCTGTGGGTaGTCTGGTGTTGGAGAAGGCCCAGGATGGTTGGAA +
Preference number: 6 (lower is better)
Translates to: PCFYVHTLVCCG*SGVGEGPGWLE
Trigger: TTCCAACCATCCTGGGCCTTCTCCAACACCAGACCACCCACAGCAGACAAGAGTATGCACATAGAAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS CCA 72 bp TGCTGTGGGTGGTCTGGTGTTGGAGAAGGCCCAGGATaGTTGGAAAATCCTTCTCAACATCTTTGCATGGGA +
Preference number: 6 (lower is better)
Translates to: CCGWSGVGEGPG*LENPSQHLCMG
Trigger: TCCCATGCAAAGATGTTGAGAAGGATTTTCCAACCATCCTGGGCCTTCTCCAACACCAGACCACCCACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS CCA 72 bp CTTCTATGTGCATACTCTTGTCTGCTGTGGGTGGTCTaGTGTTGGAGAAGGCCCAGGATGGTTGGAAAATCC +
Preference number: 6 (lower is better)
Translates to: LLCAYSCLLWVV*CWRRPRMVGKS
Trigger: GGATTTTCCAACCATCCTGGGCCTTCTCCAACACCAGACCACCCACAGCAGACAAGAGTATGCACATAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS GCA 72 bp GTAACGTCTTTGTTGAAAGGTCTCCCTGCTTCTATGTaGATACTCTTGTCTGCTGTGGGTGGTCTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: VTSLLKGLPASM*ILLSAVGGLVL
Trigger: CAACACCAGACCACCCACAGCAGACAAGAGTATGCACATAGAAGCAGGGAGACCTTTCAACAAAGACGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS GCA 72 bp GCTCACATTTGTAACGTCTTTGTTGAAAGGTCTCCCTaGTTCTATGTGCATACTCTTGTCTGCTGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: AHICNVFVERSP*FYVHTLVCCGW
Trigger: CCACCCACAGCAGACAAGAGTATGCACATAGAAGCAGGGAGACCTTTCAACAAAGACGTTACAAATGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS CCA 72 bp GACACAGGTACCTTTTGCTGTGAACAGGAATCTTTATaGTTGCTCTGGCTCAATCCAGCTACTGAGGCCATA +
Preference number: 6 (lower is better)
Translates to: DTGTFCCEQESL*LLWLNPATEAI
Trigger: TATGGCCTCAGTAGCTGGATTGAGCCAGAGCAACCATAAAGATTCCTGTTCACAGCAAAAGGTACCTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS CAA 90 bp TTCAGAGACACAGGTACCTTTTGCTGTGAACAGGAATCTTTATGGTaGCTCTGGCTCAATCCAGCTACTGAGGCCATAAGCGAAAAGTTC +
Preference number: 6 (lower is better)
Translates to: FRDTGTFCCEQESLW*LWLNPATEAISEKF
Trigger: GAACTTTTCGCTTATGGCCTCAGTAGCTGGATTGAGCCAGAGCAACCATAAAGATTCCTGTTCACAGCAAAAGGTACCTGTGTCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS CCA 72 bp ACCTTTTGCTGTGAACAGGAATCTTTATGGTTGCTCTaGCTCAATCCAGCTACTGAGGCCATAAGCGAAAAG +
Preference number: 6 (lower is better)
Translates to: TFCCEQESLWLL*LNPATEAISEK
Trigger: CTTTTCGCTTATGGCCTCAGTAGCTGGATTGAGCCAGAGCAACCATAAAGATTCCTGTTCACAGCAAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602149.1
CDS TCA 72 bp CACACAATTATTCAGAGACACAGGTACCTTTTGCTGTaGACAGGAATCTTTATGGTTGCTCTGGCTCAATCC +
Preference number: 6 (lower is better)
Translates to: HTIIQRHRYLLL*TGIFMVALAQS
Trigger: GGATTGAGCCAGAGCAACCATAAAGATTCCTGTTCACAGCAAAAGGTACCTGTGTCTCTGAATAATTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594943.1
ENST00000602149.1
CDS TCA 72 bp ATCCTTCTCAACATCTTTGCATGGGAAAAGATTGTCTaGCAGAGGAATTTTGCAGCTATTCAGAAGCAAGGC +
Preference number: 6 (lower is better)
Translates to: ILLNIFAWEKIV*QRNFAAIQKQG
Trigger: GCCTTGCTTCTGAATAGCTGCAAAATTCCTCTGTCAGACAATCTTTTCCCATGCAAAGATGTTGAGAAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS CAA 90 bp GTGGACTCTCTGATGCTCAGTAACATGAACTTTCTCATTGAAAACTaGCTCACATTTGTAACGTCTTTGTTGAAAGGTCTCCCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: VDSLMLSNMNFLIEN*LTFVTSLLKGLPAS
Trigger: AGAAGCAGGGAGACCTTTCAACAAAGACGTTACAAATGTGAGCAAGTTTTCAATGAGAAAGTTCATGTTACTGAGCATCAGAGAGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS CAA 90 bp ATGAACTTTCTCATTGAAAACTTGCTCACATTTGTAACGTCTTTGTaGAAAGGTCTCCCTGCTTCTATGTGCATACTCTTGTCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: MNFLIENLLTFVTSL*KGLPASMCILLSAV
Trigger: CACAGCAGACAAGAGTATGCACATAGAAGCAGGGAGACCTTTCAACAAAGACGTTACAAATGTGAGCAAGTTTTCAATGAGAAAGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS CAA 72 bp TTTCTCATTGAAAACTTGCTCACATTTGTAACGTCTTaGTTGAAAGGTCTCCCTGCTTCTATGTGCATACTC +
Preference number: 6 (lower is better)
Translates to: FLIENLLTFVTS*LKGLPASMCIL
Trigger: GAGTATGCACATAGAAGCAGGGAGACCTTTCAACAAAGACGTTACAAATGTGAGCAAGTTTTCAATGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8
CDS CAA 72 bp CTGATGCTCAGTAACATGAACTTTCTCATTGAAAACTaGCTCACATTTGTAACGTCTTTGTTGAAAGGTCTC +
Preference number: 6 (lower is better)
Translates to: LMLSNMNFLIEN*LTFVTSLLKGL
Trigger: GAGACCTTTCAACAAAGACGTTACAAATGTGAGCAAGTTTTCAATGAGAAAGTTCATGTTACTGAGCATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240719.7
ENST00000376233.8