Pregenerated sensors for ZNF547 (Homo sapiens)
Ensembl gene IDs: ENSG00000152433Ensembl transcript IDs: ENST00000282282.4, ENST00000595335.5, ENST00000599604.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGTCAAACCAAAATAATGTCCCGAGTTTGCTGAACACACATTTCTaGAGTGTGAATTCTCTGATACATAGCGACTGGAGAGCTGTACCT | + |
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Preference number: 1 (lower is better) Translates to: ESNQNNVPSLLNTHF*SVNSLIHSDWRAVP Trigger: AGGTACAGCTCTCCAGTCGCTATGTATCAGAGAATTCACACTGCAGAAATGTGTGTTCAGCAAACTCGGGACATTATTTTGGTTTGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR-3UTR GCA 90 bp | ATTTGCTGTACTCAGAAGACTTTCACTAGTGTGGATATTCTGAAGCCCAATAAGCCAGTGTGTACTGCCTaGTGTCCAGCCACAATATGT | + |
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Preference number: 2 (lower is better) Translates to: ICCTQKTFTSVDILKPNKPVCTA*CPATIC Trigger: ACATATTGTGGCTGGACAGCAGGCAGTACACACTGG...CTTATTGGGCTTCAGAATATCCACACTAGTGAAAGTCTTCTGAGTACAGCAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR-3UTR TCA 90 bp | CTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGTTAGGAATGATGTCCCGAGTTTGCTaGACACACATTTCTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LLWIRMRTNHNFCGMLGMMSRVC*THISAV Trigger: CACTGCAGAAATGTGTGTTCAGCAAACTCGGGACAT...CATTCCTAACATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR-3UTR CCA 90 bp | CTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGTTAGGAATGTTCAAGGCACATACGTaGCCTTTTTCCAGTGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: LLWIRMRTNHNFCGMLGMFKAHT*PFSSVN Trigger: GTTCACACTGGAAAAAGGCCACGTATGTGCCTTGAA...CATTCCTAACATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR-3UTR CCA 90 bp | TGTTATAAAAATGGGATAGGACAGTTCTCAAAATGTAGTCCCTACATCAGCAACAATGACTTAAAAATATaGTGGTCGCCAGGGACTGAA | + |
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Preference number: 2 (lower is better) Translates to: CYKNGIGQFSKCSPYISNNDLKI*WSPGTE Trigger: TTCAGTCCCTGGCGACCACCATATTTTTAAGTCATT...GTTGCTGATGTAGGGACTACATTTTGAGAACTGTCCTATCCCATTTTTATAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR-3UTR CCA 90 bp | CTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGTTAGGAATGACGGTGCAAGTTTTATaGAAAAGTTTCTCAGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LLWIRMRTNHNFCGMLGMTVQVL*KSFSVH Trigger: ATGAACTGAGAAACTTTTCCATAAAACTTGCACCGT...CATTCCTAACATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR TCA 72 bp | CCAGCAGTTCCACTTTTTGGGGTACCCAATAAGAATTaGAAGCAGGGTCTCAAAGAGATATTTGTGCCCTTA | + |
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Preference number: 3 (lower is better) Translates to: PAVPLFGVPNKN*KQGLKEIFVPL Trigger: TAAGGGCACAAATATCTCTTTGAGACCCTGCTTTCAATTCTTATTGGGTACCCCAAAAAGTGGAACTGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR CCA 72 bp | GCTAAATCACAGATTTCTGGGTGTTGTTCGTCATTTTaGCTACATTCAAGGCACATACGTGGCCTTTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: AKSQISGCCSSF*LHSRHIRGLFP Trigger: TGGAAAAAGGCCACGTATGTGCCTTGAATGTAGCCAAAATGACGAACAACACCCAGAAATCTGTGATTTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR-3UTR CAA 90 bp | TGTTATAAAAATGGGATAGGACAGTTCTCAAAATGTAGTCCCTACATCAGCAACTCCAGCCACAATATGTaGGTGACTGAAGGCTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: CYKNGIGQFSKCSPYISNSSHNM*VTEGFP Trigger: GGGAAAGCCTTCAGTCACCAACATATTGTGGCTGGA...GTTGCTGATGTAGGGACTACATTTTGAGAACTGTCCTATCCCATTTTTATAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR CCA 72 bp | ACCAAGAATAGTCAGAGTCATAATGACTTAAAAATATaGTGGTCGCCAGGGACTGAAGAATGTGGGAATGAG | + |
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Preference number: 3 (lower is better) Translates to: TKNSQSHNDLKI*WSPGTEECGNE Trigger: CTCATTCCCACATTCTTCAGTCCCTGGCGACCACCATATTTTTAAGTCATTATGACTCTGACTATTCTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR CCA 72 bp | AAGAATAGTCAGAGTCATAATGACTTAAAAATATGGTaGTCGCCAGGGACTGAAGAATGTGGGAATGAGTTG | + |
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Preference number: 3 (lower is better) Translates to: KNSQSHNDLKIW*SPGTEECGNEL Trigger: CAACTCATTCCCACATTCTTCAGTCCCTGGCGACCACCATATTTTTAAGTCATTATGACTCTGACTATTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR-3UTR CAA 90 bp | TGTTATAAAAATGGGATAGGACAGTTCTCAAAATGTAGTCCCTACATCAGCAACGTGTTGTTCGTCATTTaGGCTACATTCAAGGCACAT | + |
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Preference number: 3 (lower is better) Translates to: CYKNGIGQFSKCSPYISNVLFVI*ATFKAH Trigger: ATGTGCCTTGAATGTAGCCAAAATGACGAACAACAC...GTTGCTGATGTAGGGACTACATTTTGAGAACTGTCCTATCCCATTTTTATAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR TCA 72 bp | GCTGTACTCAGAAGACTTTCACTAGTGTGGATATTCTaGAGCCCAATAAGTACAATCTTGCATGTTGAATCT | + |
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Preference number: 3 (lower is better) Translates to: AVLRRLSLVWIF*SPISTILHVES Trigger: AGATTCAACATGCAAGATTGTACTTATTGGGCTTCAGAATATCCACACTAGTGAAAGTCTTCTGAGTACAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR-3UTR CAA 90 bp | CTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGTTAGGAATGAATAATGTCCCGAGTTaGCTGAACACACATTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: LLWIRMRTNHNFCGMLGMNNVPS*LNTHFC Trigger: GCAGAAATGTGTGTTCAGCAAACTCGGGACATTATT...CATTCCTAACATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR GCA 72 bp | GTAGTGTGGAGTAGTAGCAAAATAATGTCACACATTTaGTGTACTCAGAAGACTTTCACTAGTGTGGATATT | + |
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Preference number: 3 (lower is better) Translates to: VVWSSSKIMSHI*CTQKTFTSVDI Trigger: AATATCCACACTAGTGAAAGTCTTCTGAGTACAGCAAATGTGTGACATTATTTTGCTACTACTCCACACTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR-3UTR CAA 90 bp | AAATGTTGCCTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGGTCTCAAAGAGATATTaGTGCCCTTATGCTTGTAGT | + |
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Preference number: 3 (lower is better) Translates to: KCCLLWIRMRTNHNFCGMVSKRY*CPYACS Trigger: ACTACAAGCATAAGGGCACAAATATCTCTTTGAGAC...CATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAGGCAACATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR GCA 90 bp | GTGTACTGCCTGCTGTCCAGCCACAATATGTTGGTGACTGAAGGCTTTCCCATACACGTGTACAGTCCCTaGTCGGGGTGTGTTCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: VYCLLSSHNMLVTEGFPIHVYSP*SGCVPS Trigger: TGACGGAACACACCCCGAGCAGGGACTGTACACGTG...TATGGGAAAGCCTTCAGTCACCAACATATTGTGGCTGGACAGCAGGCAGTACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR TCA 90 bp | GTGTACTGCCTGCTGTCCAGCCACAATATGTTGGTGACTGAAGGCTTTCCCATAATGTCCCGAGTTTGCTaGACACACATTTCTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: VYCLLSSHNMLVTEGFPIMSRVC*THISAV Trigger: CACTGCAGAAATGTGTGTTCAGCAAACTCGGGACAT...TATGGGAAAGCCTTCAGTCACCAACATATTGTGGCTGGACAGCAGGCAGTACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR TCA 90 bp | GTGTACTGCCTGCTGTCCAGCCACAATATGTTGGTGACTGAAGGCTTTCCCATATCTTCAAAAACCACATaGCCCTGTGCAGGGTTCATT | + |
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Preference number: 4 (lower is better) Translates to: VYCLLSSHNMLVTEGFPISSKTT*PCAGFI Trigger: AATGAACCCTGCACAGGGTCATGTGGTTTTTGAAGA...TATGGGAAAGCCTTCAGTCACCAACATATTGTGGCTGGACAGCAGGCAGTACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR TCA 90 bp | TGTTGTTCGTCATTTTGGCTACATTCAAGGCACATACGTGGCCTTTTTCCAGTGTCCTTTTGGTGCTGGTaGAGATGTGCTGGACACGTG | + |
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Preference number: 4 (lower is better) Translates to: CCSSFWLHSRHIRGLFPVSFWCW*RCAGHV Trigger: CACGTGTCCAGCACATCTTCACCAGCACCAAAAGGA...CACTGGAAAAAGGCCACGTATGTGCCTTGAATGTAGCCAAAATGACGAACAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR CCA 90 bp | TGTTGTTCGTCATTTTGGCTACATTCAAGGCACATACGTGGCCTTTTTCCAGTGTCATCCTCAGCTCCATaGCAACAACCTAGTGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: CCSSFWLHSRHIRGLFPVSSSAP*QQPSED Trigger: GTCCTCACTAGGTTGTTGCCATGGAGCTGAGGATGA...CACTGGAAAAAGGCCACGTATGTGCCTTGAATGTAGCCAAAATGACGAACAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR TCA 90 bp | GTGTACTGCCTGCTGTCCAGCCACAATATGTTGGTGACTGAAGGCTTTCCCATACTAGTGTGGATATTCTaGAGCCCAATAAGTACAATC | + |
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Preference number: 4 (lower is better) Translates to: VYCLLSSHNMLVTEGFPILVWIF*SPISTI Trigger: GATTGTACTTATTGGGCTTCAGAATATCCACACTAG...TATGGGAAAGCCTTCAGTCACCAACATATTGTGGCTGGACAGCAGGCAGTACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR GCA 90 bp | TGTTGTTCGTCATTTTGGCTACATTCAAGGCACATACGTGGCCTTTTTCCAGTGAACCACATGACCCTGTaGAGGGTTCATTTCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: CCSSFWLHSRHIRGLFPVNHMTL*RVHFCH Trigger: ATGGCAGAAATGAACCCTGCACAGGGTCATGTGGTT...CACTGGAAAAAGGCCACGTATGTGCCTTGAATGTAGCCAAAATGACGAACAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR CCA 90 bp | ATTTGCTGTACTCAGAAGACTTTCACTAGTGTGGATATTCTGAAGCCCAATAAGCAGGGCTGGGTATTCTaGGTAGATAGACAGGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: ICCTQKTFTSVDILKPNKQGWVF*VDRQGF Trigger: AAAGCCCTGTCTATCTACCCAGAATACCCAGCCCTG...CTTATTGGGCTTCAGAATATCCACACTAGTGAAAGTCTTCTGAGTACAGCAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR GCA 90 bp | CTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGTTAGGAATGGTGCTGGTGAAGATGTaGTGGACACGTGTACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LLWIRMRTNHNFCGMLGMVLVKM*WTRVQS Trigger: GGACTGTACACGTGTCCAGCACATCTTCACCAGCAC...CATTCCTAACATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR TCA 90 bp | TGTTATAAAAATGGGATAGGACAGTTCTCAAAATGTAGTCCCTACATCAGCAACCCAGTGTGGACTTTCTaGTGTCTGAGAAGTGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: CYKNGIGQFSKCSPYISNPVWTF*CLRSVE Trigger: CTCTACACTTCTCAGACATCAGAAAGTCCACACTGG...GTTGCTGATGTAGGGACTACATTTTGAGAACTGTCCTATCCCATTTTTATAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR GCA 90 bp | AAATGTTGCCTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGCCAGTGTGTACTGCCTaGTGTCCAGCCACAATATGT | + |
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Preference number: 4 (lower is better) Translates to: KCCLLWIRMRTNHNFCGMPVCTA*CPATIC Trigger: ACATATTGTGGCTGGACAGCAGGCAGTACACACTGG...CATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAGGCAACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR CCA 90 bp | ATTTGCTGTACTCAGAAGACTTTCACTAGTGTGGATATTCTGAAGCCCAATAAGTTCAAGGCACATACGTaGCCTTTTTCCAGTGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: ICCTQKTFTSVDILKPNKFKAHT*PFSSVN Trigger: GTTCACACTGGAAAAAGGCCACGTATGTGCCTTGAA...CTTATTGGGCTTCAGAATATCCACACTAGTGAAAGTCTTCTGAGTACAGCAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR TCA 90 bp | TGTTATAAAAATGGGATAGGACAGTTCTCAAAATGTAGTCCCTACATCAGCAACCTAAGATTCTTCTTCTaGGAAGTACCAAGAATAGTC | + |
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Preference number: 4 (lower is better) Translates to: CYKNGIGQFSKCSPYISNLRFFF*EVPRIV Trigger: GACTATTCTTGGTACTTCTCAGAAGAAGAATCTTAG...GTTGCTGATGTAGGGACTACATTTTGAGAACTGTCCTATCCCATTTTTATAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR TCA 90 bp | TGTTATAAAAATGGGATAGGACAGTTCTCAAAATGTAGTCCCTACATCAGCAACGTTTTGTATCAAAGATaGCAAGCTATTTCCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: CYKNGIGQFSKCSPYISNVLYQR*QAISWL Trigger: CAACCAGGAAATAGCTTGTCATCTTTGATACAAAAC...GTTGCTGATGTAGGGACTACATTTTGAGAACTGTCCTATCCCATTTTTATAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR CCA 90 bp | CTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGTTAGGAATGAATGACTTAAAAATATaGTGGTCGCCAGGGACTGAA | + |
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Preference number: 4 (lower is better) Translates to: LLWIRMRTNHNFCGMLGMNDLKI*WSPGTE Trigger: TTCAGTCCCTGGCGACCACCATATTTTTAAGTCATT...CATTCCTAACATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR TCA 90 bp | CTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGTTAGGAATGATGCCTAAAGAGGTTTaGGTTGCACTTAAAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: LLWIRMRTNHNFCGMLGMMPKEV*VALKEL Trigger: AAGTTCTTTAAGTGCAACTCAAACCTCTTTAGGCAT...CATTCCTAACATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR GCA 90 bp | AAATGTTGCCTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGCTGAACACACATTTCTaGAGTGTGAATTCTCTGATA | + |
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Preference number: 4 (lower is better) Translates to: KCCLLWIRMRTNHNFCGMLNTHF*SVNSLI Trigger: TATCAGAGAATTCACACTGCAGAAATGTGTGTTCAG...CATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAGGCAACATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| 3UTR CAA 72 bp | CCAATAAGAATTGAAAGCAGGGTCTCAAAGAGATATTaGTGCCCTTATGCTTGTAGTAGCAATATTCACAAT | + |
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Preference number: 4 (lower is better) Translates to: PIRIESRVSKRY*CPYACSSNIHN Trigger: ATTGTGAATATTGCTACTACAAGCATAAGGGCACAAATATCTCTTTGAGACCCTGCTTTCAATTCTTATTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR GCA 90 bp | CTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGTTAGGAATGATAATGTCACACATTTaGTGTACTCAGAAGACTTTC | + |
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Preference number: 4 (lower is better) Translates to: LLWIRMRTNHNFCGMLGMIMSHI*CTQKTF Trigger: GAAAGTCTTCTGAGTACAGCAAATGTGTGACATTAT...CATTCCTAACATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR CCA 90 bp | AAATGTTGCCTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGACGGTGCAAGTTTTATaGAAAAGTTTCTCAGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: KCCLLWIRMRTNHNFCGMTVQVL*KSFSVH Trigger: ATGAACTGAGAAACTTTTCCATAAAACTTGCACCGT...CATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAGGCAACATTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS GCA 90 bp | GCCGTCCCCAGTCCTTGTCAGCTGAGCTTCTGCCACTGTCAGTTGTaGCTGTGTCACTACCGCCTCTGCGTACAAGGAACCAAGCCGCTT | + |
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Preference number: 5 (lower is better) Translates to: AVPSPCQLSFCHCQL*LCHYRLCVQGTKPL Trigger: AAGCGGCTTGGTTCCTTGTACGCAGAGGCGGTAGTGACACAGGCACAACTGACAGTGGCAGAAGCTCAGCTGACAAGGACTGGGGACGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595335.5 |
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| CDS CCA 90 bp | TGGCCACGTCTTCAAAAACCACATGACCCTGTAGTCCTAGCTACTTaGGAGATTGAGGCAGAACTGCTTGAATCCAGGAGGTGCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: WPRLQKPHDPVVLAT*EIEAELLESRRCRL Trigger: CAACCTGCACCTCCTGGATTCAAGCAGTTCTGCCTCAATCTCCCAAGTAGCTAGGACTACAGGGTCATGTGGTTTTTGAAGACGTGGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000595335.5 |
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| CDS-3UTR CAA 90 bp | TGTTGTTCGTCATTTTGGCTACATTCAAGGCACATACGTGGCCTTTTTCCAGTGTTCTGCCACTGTCAGTaGTGCCTGTGTCACTACCGC | + |
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Preference number: 5 (lower is better) Translates to: CCSSFWLHSRHIRGLFPVFCHCQ*CLCHYR Trigger: GCGGTAGTGACACAGGCACAACTGACAGTGGCAGAA...CACTGGAAAAAGGCCACGTATGTGCCTTGAATGTAGCCAAAATGACGAACAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR CAA 90 bp | TGTTATAAAAATGGGATAGGACAGTTCTCAAAATGTAGTCCCTACATCAGCAACCGCCGTCCCCAGTCCTaGTCAGCTGAGCTTCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: CYKNGIGQFSKCSPYISNRRPQS*SAELLP Trigger: TGGCAGAAGCTCAGCTGACAAGGACTGGGGACGGCG...GTTGCTGATGTAGGGACTACATTTTGAGAACTGTCCTATCCCATTTTTATAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR CAA 90 bp | TGTTGTTCGTCATTTTGGCTACATTCAAGGCACATACGTGGCCTTTTTCCAGTGTCCAGCCACAATATGTaGGTGACTGAAGGCTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: CCSSFWLHSRHIRGLFPVSSHNM*VTEGFP Trigger: GGGAAAGCCTTCAGTCACCAACATATTGTGGCTGGA...CACTGGAAAAAGGCCACGTATGTGCCTTGAATGTAGCCAAAATGACGAACAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS GCA 90 bp | AATGGCTCCCACCTCATAGGACTCTTACCGGTGTCAAACACTCGTTaGTCATCATATATATCAGCTATTACTGTTCTTGGATTAATGGTT | + |
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Preference number: 5 (lower is better) Translates to: NGSHLIGLLPVSNTR*SSYISAITVLGLMV Trigger: AACCATTAATCCAAGAACAGTAATAGCTGATATATATGATGAGCAACGAGTGTTTGACACCGGTAAGAGTCCTATGAGGTGGGAGCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599604.1 |
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| CDS-3UTR CAA 90 bp | AAATGTTGCCTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGATTCACTGCACTGCTTaGCTGCAGTGTGAACTGTCT | + |
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Preference number: 5 (lower is better) Translates to: KCCLLWIRMRTNHNFCGMIHCTA*LQCELS Trigger: AGACAGTTCACACTGCAGCAAAGCAGTGCAGTGAAT...CATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAGGCAACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR CAA 90 bp | AAATGTTGCCTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGAATAATGTCCCGAGTTaGCTGAACACACATTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: KCCLLWIRMRTNHNFCGMNNVPS*LNTHFC Trigger: GCAGAAATGTGTGTTCAGCAAACTCGGGACATTATT...CATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAGGCAACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR CAA 90 bp | CTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGTTAGGAATGACAGATTTCTGGGTGTaGTTCGTCATTTTGGCTACA | + |
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Preference number: 5 (lower is better) Translates to: LLWIRMRTNHNFCGMLGMTDFWV*FVILAT Trigger: TGTAGCCAAAATGACGAACAACACCCAGAAATCTGT...CATTCCTAACATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR CAA 90 bp | AAATGTTGCCTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGCAGCAGTTCCACTTTTaGGGGTACCCAATAAGAATT | + |
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Preference number: 5 (lower is better) Translates to: KCCLLWIRMRTNHNFCGMQQFHF*GYPIRI Trigger: AATTCTTATTGGGTACCCCAAAAAGTGGAACTGCTG...CATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAGGCAACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR CAA 90 bp | CTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGTTAGGAATGCTAAAGAGGTTTGAGTaGCACTTAAAGAACTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: LLWIRMRTNHNFCGMLGMLKRFE*HLKNFP Trigger: TGGGAAGTTCTTTAAGTGCAACTCAAACCTCTTTAG...CATTCCTAACATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS-3UTR CAA 90 bp | CTTCTATGGATTAGAATGAGGACAAATCACAACTTTTGTGGAATGTTAGGAATGGTCTCAAAGAGATATTaGTGCCCTTATGCTTGTAGT | + |
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Preference number: 5 (lower is better) Translates to: LLWIRMRTNHNFCGMLGMVSKRY*CPYACS Trigger: ACTACAAGCATAAGGGCACAAATATCTCTTTGAGAC...CATTCCTAACATTCCACAAAAGTTGTGATTTGTCCTCATTCTAATCCATAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282282.4 |
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| CDS GCA 72 bp | GACACCGCCGTCCCCAGTCCTTGTCAGCTGAGCTTCTaGCACTGTCAGTTGTGCCTGTGTCACTACCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: DTAVPSPCQLSF*HCQLCLCHYRL Trigger: GAGGCGGTAGTGACACAGGCACAACTGACAGTGGCAGAAGCTCAGCTGACAAGGACTGGGGACGGCGGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000282282.4 ENST00000595335.5 |
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| CDS CAA 90 bp | ACCGCCGTCCCCAGTCCTTGTCAGCTGAGCTTCTGCCACTGTCAGTaGTGCCTGTGTCACTACCGCCTCTGCGTACAAGGAACCAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: TAVPSPCQLSFCHCQ*CLCHYRLCVQGTKP Trigger: CGGCTTGGTTCCTTGTACGCAGAGGCGGTAGTGACACAGGCACAACTGACAGTGGCAGAAGCTCAGCTGACAAGGACTGGGGACGGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595335.5 |
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| CDS CAA 72 bp | CCCAGTCCTTGTCAGCTGAGCTTCTGCCACTGTCAGTaGTGCCTGTGTCACTACCGCCTCTGCGTACAAGGA | + |
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Preference number: 6 (lower is better) Translates to: PSPCQLSFCHCQ*CLCHYRLCVQG Trigger: TCCTTGTACGCAGAGGCGGTAGTGACACAGGCACAACTGACAGTGGCAGAAGCTCAGCTGACAAGGACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595335.5 |
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| CDS GCA 72 bp | AGTCCTTGTCAGCTGAGCTTCTGCCACTGTCAGTTGTaGCTGTGTCACTACCGCCTCTGCGTACAAGGAACC | + |
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Preference number: 6 (lower is better) Translates to: SPCQLSFCHCQL*LCHYRLCVQGT Trigger: GGTTCCTTGTACGCAGAGGCGGTAGTGACACAGGCACAACTGACAGTGGCAGAAGCTCAGCTGACAAGGACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595335.5 |
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| CDS CCA 72 bp | CTTCAAAAACCACATGACCCTGTAGTCCTAGCTACTTaGGAGATTGAGGCAGAACTGCTTGAATCCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LQKPHDPVVLAT*EIEAELLESRR Trigger: CCTCCTGGATTCAAGCAGTTCTGCCTCAATCTCCCAAGTAGCTAGGACTACAGGGTCATGTGGTTTTTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000595335.5 |
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| CDS CAA 72 bp | GTTGATTGTATAAACTCAGCTCCTCCGACTTCACTGTaGGCTCTTAGCAGCACTGTGACTCTAGAAAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: VDCINSAPPTSL*ALSSTVTLEKN Trigger: GTTCTTTTCTAGAGTCACAGTGCTGCTAAGAGCCAACAGTGAAGTCGGAGGAGCTGAGTTTATACAATCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599604.1 |
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| CDS CAA 72 bp | CCACCTCATAGGACTCTTACCGGTGTCAAACACTCGTaGCTCATCATATATATCAGCTATTACTGTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: PPHRTLTGVKHS*LIIYISYYCSW Trigger: CCAAGAACAGTAATAGCTGATATATATGATGAGCAACGAGTGTTTGACACCGGTAAGAGTCCTATGAGGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599604.1 |
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| CDS CAA 90 bp | GAATGGCTCCCACCTCATAGGACTCTTACCGGTGTCAAACACTCGTaGCTCATCATATATATCAGCTATTACTGTTCTTGGATTAATGGT | + |
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Preference number: 6 (lower is better) Translates to: EWLPPHRTLTGVKHS*LIIYISYYCSWING Trigger: ACCATTAATCCAAGAACAGTAATAGCTGATATATATGATGAGCAACGAGTGTTTGACACCGGTAAGAGTCCTATGAGGTGGGAGCCATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599604.1 |
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