RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF546 (Homo sapiens)

Ensembl gene IDs: ENSG00000187187, ENSG00000281526

Ensembl transcript IDs: ENST00000347077.9, ENST00000593687.5, ENST00000596894.5, ENST00000597363.5, ENST00000600094.5, ENST00000602253.5, ENST00000625917.2, ENST00000626141.2, ENST00000626389.3, ENST00000627583.2, ENST00000627810.2, ENST00000629260.2, ENST00000651981.1, ENST00000652291.1

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTAGAGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTaGTGGTTTGGGATGCAGTGCATCAGTATCAATCTTCTAAAGTCT +
Preference number: 1 (lower is better)
Translates to: LEKHCSTTVCRGKGP*WFGMQCISINLLKS
Trigger: AGACTTTAGAAGATTGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR CCA 90 bp TCTTACCGGGAAGGCTTTTCACAAAACTGCTTGATGACTGCCACCTaGTTGGAAGTATTGTCAGATGCCATAAATTGTAAGATACACCTT +
Preference number: 1 (lower is better)
Translates to: SYREGFSQNCLMTAT*LEVLSDAINCKIHL
Trigger: AAGGTGTATCTTACAATTTATGGCATCTGACAATACTTCCAACCAGGTGGCAGTCATCAAGCAGTTTTGTGAAAAGCCTTCCCGGTAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR TCA 90 bp GAATCATTTTCCGTTACAGTGCTATATAAAGTGTGGTCCATGTGTTaGCACTGGCCCACAAATTGTTTGCTTCTGGTCTCTGCAAAAGTT +
Preference number: 1 (lower is better)
Translates to: ESFSVTVLYKVWSMC*HWPTNCLLLVSAKV
Trigger: AACTTTTGCAGAGACCAGAAGCAAACAATTTGTGGGCCAGTGTCAACACATGGACCACACTTTATATAGCACTGTAACGGAAAATGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
3UTR GCA 90 bp GTCCATGTGTTGACACTGGCCCACAAATTGTTTGCTTCTGGTCTCTaGAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGC +
Preference number: 1 (lower is better)
Translates to: VHVLTLAHKLFASGL*KSYRYQEQVFRNVC
Trigger: GCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAGAAGCAAACAATTTGTGGGCCAGTGTCAACACATGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR TCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCAGGGGAAAAGGCCCTTaGTGGTTTGGGATGCAGTGC +
Preference number: 2 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPRGKGP*WFGMQC
Trigger: GCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCT...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR TCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTACTCCTGACCTCAGGTaGTCTGCTCACCTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: TGSRVVSRRNKVLALNICTPDLR*SAHLGL
Trigger: GAGGCCCAGGTGAGCAGATCACCTGAGGTCAGGAGT...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR GCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCGCGATCTCAGCTCACTaGAACCTCTGCCACTTAGGT +
Preference number: 2 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSAISAH*NLCHLG
Trigger: ACCTAAGTGGCAGAGGTTGCAGTGAGCTGAGATCGC...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTGGTGATCTGCTCACCTaGGCCTCCCATAGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: TGSRVVSRRNKVLALNICGDLLT*ASHSAG
Trigger: CCCAGCACTATGGGAGGCCCAGGTGAGCAGATCACC...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCGGGCTTCATCCCAAGTaGGTCAGGCAGAAGCTGTAT +
Preference number: 2 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSGLHPK*VRQKLY
Trigger: ATACAGCTTCTGCCTGACCCACTTGGGATGAAGCCC...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCGTGTGGTCCATGTGTTaGCACTGGCCCACAAATTGT +
Preference number: 2 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSVWSMC*HWPTNC
Trigger: ACAATTTGTGGGCCAGTGTCAACACATGGACCACAC...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCAGGCCCTTGATGGTTTaGGATGCAGTGCATCAGTAT +
Preference number: 2 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPRPLMV*DAVHQY
Trigger: ATACTGATGCACTGCATCCCAAACCATCAAGGGCCT...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR TCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCCTAACAGGGACTGAGTaGTGCTATAGTCTTTCGACT +
Preference number: 2 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPLTGTE*CYSLST
Trigger: AGTCGAAAGACTATAGCATCACTCAGTCCCTGTTAG...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR TCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCAATGGTATATCCCAGTaGGACCAGGTTGCTGTAGTT +
Preference number: 2 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPNGISQ*DQVAVV
Trigger: AACTACAGCAACCTGGTCTCACTGGGATATACCATT...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATGGTGATCTGCTCACCTaGGCCTCCCATAGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: IFWLPWVTLEEELSWATHGDLLT*ASHSAG
Trigger: CCCAGCACTATGGGAGGCCCAGGTGAGCAGATCACC...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCGCTACACCAAGTGAATaGACTAAGGATACCATAGTG +
Preference number: 2 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSATPSE*TKDTIV
Trigger: CACTATGGTATCCTTAGTTCATTCACTTGGTGTAGC...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCGTGAGCCACTTCACCTaGCCCATTATTATTGCATTT +
Preference number: 2 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPVSHFT*PIIIAF
Trigger: AAATGCAATAATAATGGGCCAGGTGAAGTGGCTCAC...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTATTTGGGCAGGCTCATaGGGGAAAGCTTTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: TGSRVVSRRNKVLALNICIWAGS*GKAFLC
Trigger: GCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAAT...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCACTCCTGACCTCAGGTaGTCTGCTCACCTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: LQIMELLLISLGVKLLGVTPDLR*SAHLGL
Trigger: GAGGCCCAGGTGAGCAGATCACCTGAGGTCAGGAGT...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTGGCAGAAAAAGCGACTaGCATACCTGCTTTTTGGGT +
Preference number: 2 (lower is better)
Translates to: TGSRVVSRRNKVLALNICGRKSD*HTCFLG
Trigger: ACCCAAAAAGCAGGTATGTCAGTCGCTTTTTCTGCC...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCACTAACAGGGACTGAGTaGTGCTATAGTCTTTCGACT +
Preference number: 2 (lower is better)
Translates to: QFVGEKALDGLGCSASVSLTGTE*CYSLST
Trigger: AGTCGAAAGACTATAGCATCACTCAGTCCCTGTTAG...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR GCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTGGCCCACAAATTGTTTaGTTCTGGTCTCTGCAAAAG +
Preference number: 2 (lower is better)
Translates to: TGSRVVSRRNKVLALNICGPQIV*FWSLQK
Trigger: CTTTTGCAGAGACCAGAAGCAAACAATTTGTGGGCC...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCACTTGAGTTTCCTCCATaGAGAAGCACAGAATCCAGA +
Preference number: 2 (lower is better)
Translates to: QFVGEKALDGLGCSASVSLEFPP*RSTESR
Trigger: TCTGGATTCTGTGCTTCTCCATGGAGGAAACTCAAG...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR TCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGACTAACAGGGACTGAGTaGTGCTATAGTCTTTCGACT +
Preference number: 2 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGLTGTE*CYSLST
Trigger: AGTCGAAAGACTATAGCATCACTCAGTCCCTGTTAG...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR TCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGAGGGGAAAAGGCCCTTaGTGGTTTGGGATGCAGTGC +
Preference number: 2 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRRGKGP*WFGMQC
Trigger: GCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCCATTCAAAGCTGCCCTaGGGCACAGACAGGTTGGAC +
Preference number: 2 (lower is better)
Translates to: LQIMELLLISLGVKLLGVHSKLP*GTDRLD
Trigger: GTCCAACCTGTCTGTGCCCCAGGGCAGCTTTGAATG...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAGGGCTTCATCCCAAGTaGGTCAGGCAGAAGCTGTAT +
Preference number: 2 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPGLHPK*VRQKLY
Trigger: ATACAGCTTCTGCCTGACCCACTTGGGATGAAGCCC...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR GCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTGGTTTGGGATGCAGTaGATCAGTATCAATCTTCTA +
Preference number: 2 (lower is better)
Translates to: TGSRVVSRRNKVLALNICWFGMQ*ISINLL
Trigger: TAGAAGATTGATACTGATGCACTGCATCCCAAACCA...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR GCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCACACAGGGGCATGTTTTaGCAAACACCACATAGGCAG +
Preference number: 2 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPHRGMF*QTPHRQ
Trigger: CTGCCTATGTGGTGTTTGGCAAAACATGCCCCTGTG...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCAAGCTAGAGTGCAGTaGTGCGATCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRQARVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCGCACCACTGCACTCTAGCTTG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCCAAGCTAGAGTGCAGTaGTGCGATCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LQIMELLLISLGVKLLGVQARVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCGCACCACTGCACTCTAGCTTG...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTGGGATATATTGGTGTaGCCATCTTTGGAATGTATG +
Preference number: 2 (lower is better)
Translates to: TGSRVVSRRNKVLALNICWDILV*PSLECM
Trigger: CATACATTCCAAAGATGGCCACACCAATATATCCCA...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATCTAACAGGGACTGAGTaGTGCTATAGTCTTTCGACT +
Preference number: 2 (lower is better)
Translates to: IFWLPWVTLEEELSWATHLTGTE*CYSLST
Trigger: AGTCGAAAGACTATAGCATCACTCAGTCCCTGTTAG...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTAAGAATGAACACAACTaGGAATATGAACACAGACTG +
Preference number: 2 (lower is better)
Translates to: TGSRVVSRRNKVLALNICKNEHN*EYEHRL
Trigger: CAGTCTGTGTTCATATTCTCAGTTGTGTTCATTCTT...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR GCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCATTCATGCAATTTTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPFMQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAAAATTGCATGAA...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR GCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCACAGGGGCATGTTTTaGCAAACACCACATAGGCAG +
Preference number: 2 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRHRGMF*QTPHRQ
Trigger: CTGCCTATGTGGTGTTTGGCAAAACATGCCCCTGTG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR TCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCGGCAGAAAAAGCGACTaGCATACCTGCTTTTTGGGT +
Preference number: 2 (lower is better)
Translates to: LQIMELLLISLGVKLLGVGRKSD*HTCFLG
Trigger: ACCCAAAAAGCAGGTATGTCAGTCGCTTTTTCTGCC...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGGGCAGAAAAAGCGACTaGCATACCTGCTTTTTGGGT +
Preference number: 2 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRGRKSD*HTCFLG
Trigger: ACCCAAAAAGCAGGTATGTCAGTCGCTTTTTCTGCC...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR TCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCTTGTCAGTTCTCCTTaGGTTTCCTCCATGGAGAAG +
Preference number: 2 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRLVSSP*VSSMEK
Trigger: CTTCTCCATGGAGGAAACTCAAGGAGAACTGACAAG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR GCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATCTTGATGGTTTGGGATaGAGTGCATCAGTATCAATC +
Preference number: 2 (lower is better)
Translates to: IFWLPWVTLEEELSWATHLDGLG*SASVSI
Trigger: GATTGATACTGATGCACTGCATCCCAAACCATCAAG...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR GCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGTTCATGCAATTTTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRFMQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAAAATTGCATGAA...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR GCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACTGCCACTTAGGTTCATaGAATTTTCCTGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINCHLGS*NFPASA
Trigger: GGCTGAGGCAGGAAAATTGCATGAACCTAAGTGGCA...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR GCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGTGCCACTTAGGTTCATaGAATTTTCCTGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRCHLGS*NFPASA
Trigger: GGCTGAGGCAGGAAAATTGCATGAACCTAAGTGGCA...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR GCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTTGCTTCTGGTCTCTaGAAAAGTTATAGATACCAA +
Preference number: 2 (lower is better)
Translates to: TGSRVVSRRNKVLALNICFASGL*KSYRYQ
Trigger: TTGGTATCTATAACTTTTGCAGAGACCAGAAGCAAA...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACAGGCCCTTGATGGTTTaGGATGCAGTGCATCAGTAT +
Preference number: 2 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINRPLMV*DAVHQY
Trigger: ATACTGATGCACTGCATCCCAAACCATCAAGGGCCT...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACACAAGCTAGAGTGCAGTaGTGCGATCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTQARVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCGCACCACTGCACTCTAGCTTG...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR TCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCTAACAGGGACTGAGTaGTGCTATAGTCTTTCGACT +
Preference number: 2 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRLTGTE*CYSLST
Trigger: AGTCGAAAGACTATAGCATCACTCAGTCCCTGTTAG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR TCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAGTGTGGTCCATGTGTTaGCACTGGCCCACAAATTGT +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTVWSMC*HWPTNC
Trigger: ACAATTTGTGGGCCAGTGTCAACACATGGACCACAC...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR TCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAGCTACACCAAGTGAATaGACTAAGGATACCATAGTG +
Preference number: 2 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPATPSE*TKDTIV
Trigger: CACTATGGTATCCTTAGTTCATTCACTTGGTGTAGC...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAATCTTTTGGCTTCCCTaGGTTACACTGGAAGAAGAA +
Preference number: 2 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPIFWLP*VTLEEE
Trigger: TTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACGTTGCAATAAAGTTGTaGGGGGAAGGGCCATTCTTA +
Preference number: 2 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINVAIKL*GEGPFL
Trigger: TAAGAATGGCCCTTCCCCCCACAACTTTATTGCAAC...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCATGGTGTGGCCATCTTTaGAATGTATGTTCTGCTACA +
Preference number: 2 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPWCGHL*NVCSAT
Trigger: TGTAGCAGAACATACATTCCAAAGATGGCCACACCA...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAGATGAACATGCAGAATaGGATATATTGGTGTGGCCA +
Preference number: 2 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPDEHAE*DILVWP
Trigger: TGGCCACACCAATATATCCCATTCTGCATGTTCATC...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCACATTACAGCTATCCCTaGGTCTTCAAAACTTTACTC +
Preference number: 2 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPHYSYP*VFKTLL
Trigger: GAGTAAAGTTTTGAAGACTCAGGGATAGCTGTAATG...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAGGCAGAAAAAGCGACTaGCATACCTGCTTTTTGGGT +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTGRKSD*HTCFLG
Trigger: ACCCAAAAAGCAGGTATGTCAGTCGCTTTTTCTGCC...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR TCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGACTGCAAACCATTTCTaGAAATGGTGTCCTCATGGA +
Preference number: 2 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRTANHF*KWCPHG
Trigger: TCCATGAGGACACCATTTTCAGAAATGGTTTGCAGT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR TCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAGTGCTCTCACTGGTGTaGATTCGCTGGTGTGAAATA +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTVLSLV*IRWCEI
Trigger: TATTTCACACCAGCGAATTCACACCAGTGAGAGCAC...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR GCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACATTCATGCAATTTTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTFMQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAAAATTGCATGAA...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR GCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGGGACACATCCCTAAATaGCAAAGATACATTGGCCAT +
Preference number: 2 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRGHIPK*QRYIGH
Trigger: ATGGCCAATGTATCTTTGGCATTTAGGGATGTGTCC...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACGTGAGCCACTTCACCTaGCCCATTATTATTGCATTT +
Preference number: 2 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINVSHFT*PIIIAF
Trigger: AAATGCAATAATAATGGGCCAGGTGAAGTGGCTCAC...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR CAA 90 bp ATTCAAAACTTCACAAGGCTGTGTGCCCACAAACCAATTCTCAAGTaGCCATTAAGTACTACTGTTCCCAGAGATGTTCTTTTAGATATG +
Preference number: 2 (lower is better)
Translates to: IQNFTRLCAHKPILK*PLSTTVPRDVLLDM
Trigger: CATATCTAAAAGAACATCTCTGGGAACAGTAGTACTTAATGGCAACTTGAGAATTGGTTTGTGGGCACACAGCCTTGTGAAGTTTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACCTGTATTGCCTTTTATaGCTTAGTCGTGGAAATCAC +
Preference number: 2 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINLYCLL*LSRGNH
Trigger: GTGATTTCCACGACTAAGTCATAAAAGGCAATACAG...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATTGTATTCCAAATCTGTaGACCAATTCCTTGTCCCTT +
Preference number: 2 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHCIPNL*TNSLSL
Trigger: AAGGGACAAGGAATTGGTTCACAGATTTGGAATACA...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR GCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACTGGTTTGGGATGCAGTaGATCAGTATCAATCTTCTA +
Preference number: 2 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINWFGMQ*ISINLL
Trigger: TAGAAGATTGATACTGATGCACTGCATCCCAAACCA...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR GCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGTGGTTTGGGATGCAGTaGATCAGTATCAATCTTCTA +
Preference number: 2 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRWFGMQ*ISINLL
Trigger: TAGAAGATTGATACTGATGCACTGCATCCCAAACCA...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR GCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAGGCCCACAAATTGTTTaGTTCTGGTCTCTGCAAAAG +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTGPQIV*FWSLQK
Trigger: CTTTTGCAGAGACCAGAAGCAAACAATTTGTGGGCC...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCATTCTATGTGATTACTTaGCATCTTCATAGCATGGTG +
Preference number: 2 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPFYVIT*HLHSMV
Trigger: CACCATGCTATGAAGATGCCAAGTAATCACATAGAA...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACACTTGAGTTTCCTCCATaGAGAAGCACAGAATCCAGA +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTLEFPP*RSTESR
Trigger: TCTGGATTCTGTGCTTCTCCATGGAGGAAACTCAAG...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR CAA 90 bp GGCTTTTCACAAAACTGCTTGATGACTGCCACCTGGTTGGAAGTATaGTCAGATGCCATAAATTGTAAGATACACCTTGATTTCAAATAT +
Preference number: 2 (lower is better)
Translates to: GFSQNCLMTATWLEV*SDAINCKIHLDFKY
Trigger: ATATTTGAAATCAAGGTGTATCTTACAATTTATGGCATCTGACAATACTTCCAACCAGGTGGCAGTCATCAAGCAGTTTTGTGAAAAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACACGAGCAAGTTCTGCATaGAAACTAAAGGACTTACCA +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTRASSA*KLKDLP
Trigger: TGGTAAGTCCTTTAGTTTTCATGCAGAACTTGCTCG...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR GCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAGGACACATCCCTAAATaGCAAAGATACATTGGCCAT +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTGHIPK*QRYIGH
Trigger: ATGGCCAATGTATCTTTGGCATTTAGGGATGTGTCC...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAGTGAGCCACTTCACCTaGCCCATTATTATTGCATTT +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTVSHFT*PIIIAF
Trigger: AAATGCAATAATAATGGGCCAGGTGAAGTGGCTCAC...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAAAGATAGGCCAAGGCTaGTCTTTCCCATGTTCATTA +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTKIGQG*SFPCSL
Trigger: TAATGAACATGGGAAAGACCAGCCTTGGCCTATCTT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACATGGTGTGGCCATCTTTaGAATGTATGTTCTGCTACA +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTWCGHL*NVCSAT
Trigger: TGTAGCAGAACATACATTCCAAAGATGGCCACACCA...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR TCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACACATTACAGCTATCCCTaGGTCTTCAAAACTTTACTC +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTHYSYP*VFKTLL
Trigger: GAGTAAAGTTTTGAAGACTCAGGGATAGCTGTAATG...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR GCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACATGGTTTGGGATGCAGTaGATCAGTATCAATCTTCTA +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTWFGMQ*ISINLL
Trigger: TAGAAGATTGATACTGATGCACTGCATCCCAAACCA...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACATGGGATATATTGGTGTaGCCATCTTTGGAATGTATG +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTWDILV*PSLECM
Trigger: CATACATTCCAAAGATGGCCACACCAATATATCCCA...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACATTACCTATCGCTGTGTaGCAAACTACTCCAAAACTT +
Preference number: 2 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTLPIAV*QTTPKL
Trigger: AAGTTTTGGAGTAGTTTGCCACACAGCGATAGGTAA...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CAA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCAGTGTGGTCCATGTGTaGACACTGGCCCACAAATTG +
Preference number: 3 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSSVVHV*TLAHKL
Trigger: CAATTTGTGGGCCAGTGTCAACACATGGACCACACT...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR CCA 72 bp TCACAGTGTTATTCCTGCCATAAACACAGGCCCACCTaGCCAGATTCAAAAGGAAGGACCATGAGCTCTACC +
Preference number: 3 (lower is better)
Translates to: SQCYSCHKHRPT*PDSKGRTMSST
Trigger: GGTAGAGCTCATGGTCCTTCCTTTTGAATCTGGCCAGGTGGGCCTGTGTTTATGGCAGGAATAACACTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CAA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCCCTGGCCCATTATTATaGCATTTTAGAGAAGCACTG +
Preference number: 3 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSPGPLL*HFREAL
Trigger: CAGTGCTTCTCTAAAATGCAATAATAATGGGCCAGG...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CAA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCCCTGGCCCATTATTATaGCATTTTAGAGAAGCACTG +
Preference number: 3 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPPGPLL*HFREAL
Trigger: CAGTGCTTCTCTAAAATGCAATAATAATGGGCCAGG...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CAA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCAATGCCAAAGATACATaGGCCATGGTTTTAGAACCA +
Preference number: 3 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPNAKDT*AMVLEP
Trigger: TGGTTCTAAAACCATGGCCAATGTATCTTTGGCATT...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CAA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTGGTGTGGCCATCTTaGGAATGTATGTTCTGCTAC +
Preference number: 3 (lower is better)
Translates to: TGSRVVSRRNKVLALNICLVWPS*ECMFCY
Trigger: GTAGCAGAACATACATTCCAAAGATGGCCACACCAA...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR TCA 72 bp CCCAAGTGGGTCAGGCAGAAGCTGTATTGCCTTTTATaGCTTAGTCGTGGAAATCACAGTGTTATTCCTGCC +
Preference number: 3 (lower is better)
Translates to: PKWVRQKLYCLL*LSRGNHSVIPA
Trigger: GGCAGGAATAACACTGTGATTTCCACGACTAAGTCATAAAAGGCAATACAGCTTCTGCCTGACCCACTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR TCA 72 bp CTACCTCTTGGGGAGTGTTGGTATCACATTGTAAGATaGACATGCAGAATGGGATATATTGGTGTGGCCATC +
Preference number: 3 (lower is better)
Translates to: LPLGECWYHIVR*TCRMGYIGVAI
Trigger: GATGGCCACACCAATATATCCCATTCTGCATGTTCATCTTACAATGTGATACCAACACTCCCCAAGAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR TCA 72 bp GCTGTAATCAGGACAGCTTTACTTAGCTTTTCTATGTaGTTACTTGGCATCTTCATAGCATGGTGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: AVIRTALLSFSM*LLGIFIAWWLG
Trigger: GCCCAGCCACCATGCTATGAAGATGCCAAGTAATCACATAGAAAAGCTAAGTAAAGCTGTCCTGATTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR GCA 72 bp ACAGCTTACAAATTTCTGTTGGACTGCATTCAAAGCTaGCCTGGGGCACAGACAGGTTGGACAATTGTTATA +
Preference number: 3 (lower is better)
Translates to: TAYKFLLDCIQS*PGAQTGWTIVI
Trigger: TATAACAATTGTCCAACCTGTCTGTGCCCCAGGGCAGCTTTGAATGCAGTCCAACAGAAATTTGTAAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR GCA 72 bp TTACCGGGAAGGCTTTTCACAAAACTGCTTGATGACTaGCACCTGGTTGGAAGTATTGTCAGATGCCATAAA +
Preference number: 3 (lower is better)
Translates to: LPGRLFTKLLDD*HLVGSIVRCHK
Trigger: TTTATGGCATCTGACAATACTTCCAACCAGGTGGCAGTCATCAAGCAGTTTTGTGAAAAGCCTTCCCGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR CCA 72 bp TGTGAAGTTACTGGGGGTCAAATCTTTTGGCTTCCCTaGGTTACACTGGAAGAAGAATTATCTTGGGCTACA +
Preference number: 3 (lower is better)
Translates to: CEVTGGQIFWLP*VTLEEELSWAT
Trigger: TGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGATTTGACCCCCAGTAACTTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR CCA 72 bp CCAGATTCAAAAGGAAGGACCATGAGCTCTACCTCTTaGGGAGTGTTGGTATCACATTGTAAGATGAACATG +
Preference number: 3 (lower is better)
Translates to: PDSKGRTMSSTS*GVLVSHCKMNM
Trigger: CATGTTCATCTTACAATGTGATACCAACACTCCCCAAGAGGTAGAGCTCATGGTCCTTCCTTTTGAATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CAA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATAAGGCCCTTGATGGTTaGGGATGCAGTGCATCAGTA +
Preference number: 3 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHKALDG*GCSASV
Trigger: TACTGATGCACTGCATCCCAAACCATCAAGGGCCTT...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CAA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATTGGGGCACAGACAGGTaGGACAATTGTTATATAGCA +
Preference number: 3 (lower is better)
Translates to: IFWLPWVTLEEELSWATHWGTDR*DNCYIA
Trigger: TGCTATATAACAATTGTCCAACCTGTCTGTGCCCCA...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CAA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAACATTTAAAAATACTTaGGGAAGGCCGGGTGCGGTG +
Preference number: 3 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPTFKNT*GRPGAV
Trigger: CACCGCACCCGGCCTTCCCAAAGTATTTTTAAATGT...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR CCA 72 bp TTACAAATTTCTGTTGGACTGCATTCAAAGCTGCCCTaGGGCACAGACAGGTTGGACAATTGTTATATAGCA +
Preference number: 3 (lower is better)
Translates to: LQISVGLHSKLP*GTDRLDNCYIA
Trigger: TGCTATATAACAATTGTCCAACCTGTCTGTGCCCCAGGGCAGCTTTGAATGCAGTCCAACAGAAATTTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CAA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATCCTGGCCCATTATTATaGCATTTTAGAGAAGCACTG +
Preference number: 3 (lower is better)
Translates to: IFWLPWVTLEEELSWATHPGPLL*HFREAL
Trigger: CAGTGCTTCTCTAAAATGCAATAATAATGGGCCAGG...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CAA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATGCTTACAAATTTCTGTaGGACTGCATTCAAAGCTGC +
Preference number: 3 (lower is better)
Translates to: IFWLPWVTLEEELSWATHAYKFL*DCIQSC
Trigger: GCAGCTTTGAATGCAGTCCAACAGAAATTTGTAAGC...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CAA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACACATTTAAAAATACTTaGGGAAGGCCGGGTGCGGTG +
Preference number: 3 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINTFKNT*GRPGAV
Trigger: CACCGCACCCGGCCTTCCCAAAGTATTTTTAAATGT...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR TCA 72 bp TTAGCTCTACAACAGAGAAACCTGGTGATTACCATATaGAGCAAGTATTTCAGTTACCTATCGCTGTGTGGC +
Preference number: 3 (lower is better)
Translates to: LALQQRNLVITI*SKYFSYLSLCG
Trigger: GCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTAATCACCAGGTTTCTCTGTTGTAGAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR TCA 72 bp CTAAACTGGGCCAGCAATTTATTGCAGAGGAATATGTaGGCAGCAGAGCAATATACAATTCACTTCCTTTCC +
Preference number: 3 (lower is better)
Translates to: LNWASNLLQRNM*AAEQYTIHFLS
Trigger: GGAAAGGAAGTGAATTGTATATTGCTCTGCTGCTCACATATTCCTCTGCAATAAATTGCTGGCCCAGTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR CCA 72 bp GAAGGCTTTTCACAAAACTGCTTGATGACTGCCACCTaGTTGGAAGTATTGTCAGATGCCATAAATTGTAAG +
Preference number: 3 (lower is better)
Translates to: EGFSQNCLMTAT*LEVLSDAINCK
Trigger: CTTACAATTTATGGCATCTGACAATACTTCCAACCAGGTGGCAGTCATCAAGCAGTTTTGTGAAAAGCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CAA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACGCAGAATGGGATATATaGGTGTGGCCATCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINAEWDI*VWPSLE
Trigger: TTCCAAAGATGGCCACACCAATATATCCCATTCTGC...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CAA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACTCACTGAGCACAGGTTaGGCCACATTCACAAATTCT +
Preference number: 3 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINSLSTG*ATFTNS
Trigger: AGAATTTGTGAATGTGGCCAAACCTGTGCTCAGTGA...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CAA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAATGGCCTCTGTGATGTaGAGTAAGATGATAGTGCCG +
Preference number: 3 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTMASVM*SKMIVP
Trigger: CGGCACTATCATCTTACTCAACATCACAGAGGCCAT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CAA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAACTTGTCAGTTCTCCTaGAGTTTCCTCCATGGAGAA +
Preference number: 3 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTTCQFS*SFLHGE
Trigger: TTCTCCATGGAGGAAACTCAAGGAGAACTGACAAGT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CAA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAACTTGTCAGTTCTCCTaGAGTTTCCTCCATGGAGAA +
Preference number: 3 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFATCQFS*SFLHGE
Trigger: TTCTCCATGGAGGAAACTCAAGGAGAACTGACAAGT...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CAA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATAATGCCAAAGATACATaGGCCATGGTTTTAGAACCA +
Preference number: 3 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHNAKDT*AMVLEP
Trigger: TGGTTCTAAAACCATGGCCAATGTATCTTTGGCATT...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR GCA 72 bp TTGACACTGGCCCACAAATTGTTTGCTTCTGGTCTCTaGAAAAGTTATAGATACCAAGAGCAAGTATTTAGA +
Preference number: 3 (lower is better)
Translates to: LTLAHKLFASGL*KSYRYQEQVFR
Trigger: TCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAGAAGCAAACAATTTGTGGGCCAGTGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CAA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACACCTGGCCCATTATTATaGCATTTTAGAGAAGCACTG +
Preference number: 3 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTPGPLL*HFREAL
Trigger: CAGTGCTTCTCTAAAATGCAATAATAATGGGCCAGG...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCAGATTATGGAATTATaGCTAATCTCCTTAGGTGTG +
Preference number: 3 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRQIMEL*LISLGV
Trigger: CACACCTAAGGAGATTAGCAATAATTCCATAATCTG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCATCTGATGTCTCTCTaGTCTCTCAAATTCATGTTT +
Preference number: 3 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRHLMSL*SLKFMF
Trigger: AAACATGAATTTGAGAGACAAGAGAGACATCAGATG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
3UTR-3UTR CAA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAATGAAGTCTAAAATGTaGAGTAAGATGATACCGACG +
Preference number: 3 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTMKSKM*SKMIPT
Trigger: CGTCGGTATCATCTTACTCAACATTTTAGACTTCAT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCGGTGATCTGCTCACCTaGGCCTCCCATAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSGDLLT*ASHSAG
Trigger: CCCAGCACTATGGGAGGCCCAGGTGAGCAGATCACC...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCGGTGATCTGCTCACCTaGGCCTCCCATAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPGDLLT*ASHSAG
Trigger: CCCAGCACTATGGGAGGCCCAGGTGAGCAGATCACC...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCCATTCAAAGCTGCCCTaGGGCACAGACAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSHSKLP*GTDRLD
Trigger: GTCCAACCTGTCTGTGCCCCAGGGCAGCTTTGAATG...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCAATGTAAAGGGCCCTTaGGGTCCAGGCAACACTGCC +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPNVKGP*GPGNTA
Trigger: GGCAGTGTTGCCTGGACCCCAAGGGCCCTTTACATT...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAACTCCTGACCTCAGGTaGTCTGCTCACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSTPDLR*SAHLGL
Trigger: GAGGCCCAGGTGAGCAGATCACCTGAGGTCAGGAGT...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCGCGATCTCAGCTCACTaGAACCTCTGCCACTTAGGT +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPAISAH*NLCHLG
Trigger: ACCTAAGTGGCAGAGGTTGCAGTGAGCTGAGATCGC...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAGGTGATCTGCTCACCTaGGCCTCCCATAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSGDLLT*ASHSAG
Trigger: CCCAGCACTATGGGAGGCCCAGGTGAGCAGATCACC...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCCACAGGGGCATGTTTTaGCAAACACCACATAGGCAG +
Preference number: 4 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSHRGMF*QTPHRQ
Trigger: CTGCCTATGTGGTGTTTGGCAAAACATGCCCCTGTG...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCCTGGAAAGGAAGGCCTaGGATAGGTCACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPLERKA*DRSLDN
Trigger: ATTGTCCAGTGACCTATCCCAGGCCTTCCTTTCCAG...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCCTTCTCGCCCGCAAGTaGATAATAACGGTTAAGGTG +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPLLARK*IITVKV
Trigger: CACCTTAACCGTTATTATTCACTTGCGGGCGAGAAG...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCCTTGTCAGTTCTCCTTaGGTTTCCTCCATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPLVSSP*VSSMEK
Trigger: CTTCTCCATGGAGGAAACTCAAGGAGAACTGACAAG...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCCTAACGCATCCCATCTaGTGTCTCTCTTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPLTHPI*CLSCLS
Trigger: TGAGAGACAAGAGAGACATCAGATGGGATGCGTTAG...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCGTGCTCTCACTGGTGTaGATTCGCTGGTGTGAAATA +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPVLSLV*IRWCEI
Trigger: TATTTCACACCAGCGAATTCACACCAGTGAGAGCAC...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAAGGGGAAAAGGCCCTTaGTGGTTTGGGATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSRGKGP*WFGMQC
Trigger: GCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCT...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCTTCATGCAATTTTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPFMQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAAAATTGCATGAA...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCTGCCACTTAGGTTCATaGAATTTTCCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSCHLGS*NFPASA
Trigger: GGCTGAGGCAGGAAAATTGCATGAACCTAAGTGGCA...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCTCACAGTGTTATTCCTaGCATAAACACAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSSQCYS*HKHRPT
Trigger: GGTGGGCCTGTGTTTATGGCAGGAATAACACTGTGA...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCGGCTTTTCACAAAACTaGTTGATGACTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSGFSQN*LMTATW
Trigger: CCAGGTGGCAGTCATCAAGCAGTTTTGTGAAAAGCC...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCTGGTCCATTGTTCACTaGAAAGGAAGGCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSWSIVH*KGRPGI
Trigger: TATCCCAGGCCTTCCTTTCCAGTGAACAATGGACCA...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCTGGTCCATTGTTCACTaGAAAGGAAGGCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPWSIVH*KGRPGI
Trigger: TATCCCAGGCCTTCCTTTCCAGTGAACAATGGACCA...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCTCCATTTCCTGGACCTaGACTTTTAGACCTGCTACA +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPSISWT*TFRPAT
Trigger: TGTAGCAGGTCTAAAAGTTCAGGTCCAGGAAATGGA...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATTCATTTGGAGGCCCGTaGAGAGGAGGGTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: IFWLPWVTLEEELSWATHSFGGP*RGGSTC
Trigger: GCAGGTGGACCCTCCTCTTCACGGGCCTCCAAATGA...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCGGAATCTCACCGGTGTaGGTTCTCAGATGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPGISPV*VLRCKV
Trigger: TACTTTACATCTGAGAACTCACACCGGTGAGATTCC...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAAGGGGAAAAGGCCCTTaGTGGTTTGGGATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGRGKGP*WFGMQC
Trigger: GCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCT...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCACAAAAGGAAGGACCATaGGCTCTACCTCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSQKEGP*ALPLGE
Trigger: CTCCCCAAGAGGTAGAGCTCATGGTCCTTCCTTTTG...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAGCGATCTCAGCTCACTaGAACCTCTGCCACTTAGGT +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSAISAH*NLCHLG
Trigger: ACCTAAGTGGCAGAGGTTGCAGTGAGCTGAGATCGC...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCGGGCCAGCAATTTATTaGAGAGGAATATGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSGPAIY*RGICEQ
Trigger: CTGCTCACATATTCCTCTGCAATAAATTGCTGGCCC...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCCCTGGGATAGGTCACTaGACAATTCAGGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPPGIGH*TIQEKQ
Trigger: TTGCTTTTCCTGAATTGTCCAGTGACCTATCCCAGG...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCCTTGAGTTTCCTCCATaGAGAAGCACAGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPLEFPP*RSTESR
Trigger: TCTGGATTCTGTGCTTCTCCATGGAGGAAACTCAAG...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCATCATTTGGAGGCCCGTaGAGAGGAGGGTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPSFGGP*RGGSTC
Trigger: GCAGGTGGACCCTCCTCTTCACGGGCCTCCAAATGA...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCACTGCAAACCATTTCTaGAAATGGTGTCCTCATGGA +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPTANHF*KWCPHG
Trigger: TCCATGAGGACACCATTTTCAGAAATGGTTTGCAGT...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCCGAGCAAGTTCTGCATaGAAACTAAAGGACTTACCA +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPRASSA*KLKDLP
Trigger: TGGTAAGTCCTTTAGTTTTCATGCAGAACTTGCTCG...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAAGAGGAGGGTCCACCTaGATGGTCCATTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGRGGST*MVHCSL
Trigger: CAGTGAACAATGGACCATGCAGGTGGACCCTCCTCT...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCCTTGATGGTTTGGGATaGAGTGCATCAGTATCAATC +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPLDGLG*SASVSI
Trigger: GATTGATACTGATGCACTGCATCCCAAACCATCAAG...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCACACAGGGGCATGTTTTaGCAAACACCACATAGGCAG +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSHRGMF*QTPHRQ
Trigger: CTGCCTATGTGGTGTTTGGCAAAACATGCCCCTGTG...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCCCGGGAGGCGGAGCTTaGAGTGAGCCAAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVPGGGA*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCGG...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCCGGGAGGCGGAGCTTaGAGTGAGCCAAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRPGGGA*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCGG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCACTGGAAAGGAAGGCCTaGGATAGGTCACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSLERKA*DRSLDN
Trigger: ATTGTCCAGTGACCTATCCCAGGCCTTCCTTTCCAG...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCTGGTGTGGCCATCTTTaGAATGTATGTTCTGCTACA +
Preference number: 4 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSWCGHL*NVCSAT
Trigger: TGTAGCAGAACATACATTCCAAAGATGGCCACACCA...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCGATGAACATGCAGAATaGGATATATTGGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPDEHAE*DILVWP
Trigger: TGGCCACACCAATATATCCCATTCTGCATGTTCATC...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCAAGGCACTGGTACTTTaGAGGAACAATCCACTGATA +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPKALVL*RNNPLI
Trigger: TATCAGTGGATTGTTCCTCCAAAGTACCAGTGCCTT...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCTGTATTCCAAATCTGTaGACCAATTCCTTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSCIPNL*TNSLSL
Trigger: AAGGGACAAGGAATTGGTTCACAGATTTGGAATACA...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCTGTATTCCAAATCTGTaGACCAATTCCTTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPCIPNL*TNSLSL
Trigger: AAGGGACAAGGAATTGGTTCACAGATTTGGAATACA...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTCTAACGCATCCCATCTaGTGTCTCTCTTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICLTHPI*CLSCLS
Trigger: TGAGAGACAAGAGAGACATCAGATGGGATGCGTTAG...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCACTAACGCATCCCATCTaGTGTCTCTCTTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSLTHPI*CLSCLS
Trigger: TGAGAGACAAGAGAGACATCAGATGGGATGCGTTAG...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTGTGCTCTCACTGGTGTaGATTCGCTGGTGTGAAATA +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICVLSLV*IRWCEI
Trigger: TATTTCACACCAGCGAATTCACACCAGTGAGAGCAC...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAGTGCTCTCACTGGTGTaGATTCGCTGGTGTGAAATA +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSVLSLV*IRWCEI
Trigger: TATTTCACACCAGCGAATTCACACCAGTGAGAGCAC...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATAGGGGAAAAGGCCCTTaGTGGTTTGGGATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: IFWLPWVTLEEELSWATHRGKGP*WFGMQC
Trigger: GCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCT...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGACTCCTGACCTCAGGTaGTCTGCTCACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRTPDLR*SAHLGL
Trigger: GAGGCCCAGGTGAGCAGATCACCTGAGGTCAGGAGT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATACTCCTGACCTCAGGTaGTCTGCTCACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHTPDLR*SAHLGL
Trigger: GAGGCCCAGGTGAGCAGATCACCTGAGGTCAGGAGT...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCATTCATGCAATTTTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSFMQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAAAATTGCATGAA...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCATGCCACTTAGGTTCATaGAATTTTCCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSCHLGS*NFPASA
Trigger: GGCTGAGGCAGGAAAATTGCATGAACCTAAGTGGCA...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGGGGTCCAGGCAACACTaGCCAAGGGGCTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRGSRQH*PRGFWE
Trigger: TTCCCAGAAGCCCCTTGGGCAGTGTTGCCTGGACCC...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGACTGGAAAGGAAGGCCTaGGATAGGTCACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGLERKA*DRSLDN
Trigger: ATTGTCCAGTGACCTATCCCAGGCCTTCCTTTCCAG...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCATGGTCCATTGTTCACTaGAAAGGAAGGCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSWSIVH*KGRPGI
Trigger: TATCCCAGGCCTTCCTTTCCAGTGAACAATGGACCA...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAAGGCCCTTGATGGTTTaGGATGCAGTGCATCAGTAT +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSRPLMV*DAVHQY
Trigger: ATACTGATGCACTGCATCCCAAACCATCAAGGGCCT...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACGGTGATCTGCTCACCTaGGCCTCCCATAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINGDLLT*ASHSAG
Trigger: CCCAGCACTATGGGAGGCCCAGGTGAGCAGATCACC...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGGGTGATCTGCTCACCTaGGCCTCCCATAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRGDLLT*ASHSAG
Trigger: CCCAGCACTATGGGAGGCCCAGGTGAGCAGATCACC...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCTGGGATATATTGGTGTaGCCATCTTTGGAATGTATG +
Preference number: 4 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSWDILV*PSLECM
Trigger: CATACATTCCAAAGATGGCCACACCAATATATCCCA...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAATTTGGGCAGGCTCATaGGGGAAAGCTTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGIWAGS*GKAFLC
Trigger: GCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAAT...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCGAACAGATCTATCCCTaGACAGTCCAAGTAAACAAA +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPEQIYP*TVQVNK
Trigger: TTTGTTTACTTGGACTGTCCAGGGATAGATCTGTTC...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCATGGCATTTCCAGTGTaGGCTCACATCCAAAATATT +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPMAFPV*AHIQNI
Trigger: AATATTTTGGATGTGAGCCCACACTGGAAATGCCAT...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGACTTCTCGCCCGCAAGTaGATAATAACGGTTAAGGTG +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGLLARK*IITVKV
Trigger: CACCTTAACCGTTATTATTCACTTGCGGGCGAGAAG...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCATCCATTTCCTGGACCTaGACTTTTAGACCTGCTACA +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSSISWT*TFRPAT
Trigger: TGTAGCAGGTCTAAAAGTTCAGGTCCAGGAAATGGA...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAAATGGTATATCCCAGTaGGACCAGGTTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSNGISQ*DQVAVV
Trigger: AACTACAGCAACCTGGTCTCACTGGGATATACCATT...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAGGAATCTCACCGGTGTaGGTTCTCAGATGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSGISPV*VLRCKV
Trigger: TACTTTACATCTGAGAACTCACACCGGTGAGATTCC...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAGTGCTCTCACTGGTGTaGATTCGCTGGTGTGAAATA +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGVLSLV*IRWCEI
Trigger: TATTTCACACCAGCGAATTCACACCAGTGAGAGCAC...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCATGTCGAGCAAGTTCTaGATGAAAACTAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPMSSKF*MKTKGL
Trigger: AAGTCCTTTAGTTTTCATGCAGAACTTGCTCGACAT...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATTCATGCAATTTTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGFMQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAAAATTGCATGAA...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCCACTTAGGTTCATaGAATTTTCCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGCHLGS*NFPASA
Trigger: GGCTGAGGCAGGAAAATTGCATGAACCTAAGTGGCA...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATGCGATCTCAGCTCACTaGAACCTCTGCCACTTAGGT +
Preference number: 4 (lower is better)
Translates to: IFWLPWVTLEEELSWATHAISAH*NLCHLG
Trigger: ACCTAAGTGGCAGAGGTTGCAGTGAGCTGAGATCGC...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCACTTCACAAGGCTGTGTaGCCACAAACCAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSLHKAV*PQTNSQ
Trigger: TTGAGAATTGGTTTGTGGGCACACAGCCTTGTGAAG...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTGGGCCAGCAATTTATTaGAGAGGAATATGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICGPAIY*RGICEQ
Trigger: CTGCTCACATATTCCTCTGCAATAAATTGCTGGCCC...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTCCTGGGATAGGTCACTaGACAATTCAGGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICPGIGH*TIQEKQ
Trigger: TTGCTTTTCCTGAATTGTCCAGTGACCTATCCCAGG...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGGTCCATTGTTCACTaGAAAGGAAGGCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGWSIVH*KGRPGI
Trigger: TATCCCAGGCCTTCCTTTCCAGTGAACAATGGACCA...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAAGGCCCTTGATGGTTTaGGATGCAGTGCATCAGTAT +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGRPLMV*DAVHQY
Trigger: ATACTGATGCACTGCATCCCAAACCATCAAGGGCCT...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATCAAGCTAGAGTGCAGTaGTGCGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IFWLPWVTLEEELSWATHQARVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCGCACCACTGCACTCTAGCTTG...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAGTTGCAATAAAGTTGTaGGGGGAAGGGCCATTCTTA +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSVAIKL*GEGPFL
Trigger: TAAGAATGGCCCTTCCCCCCACAACTTTATTGCAAC...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTGTTGCAATAAAGTTGTaGGGGGAAGGGCCATTCTTA +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICVAIKL*GEGPFL
Trigger: TAAGAATGGCCCTTCCCCCCACAACTTTATTGCAAC...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATGGGCTTCATCCCAAGTaGGTCAGGCAGAAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: IFWLPWVTLEEELSWATHGLHPK*VRQKLY
Trigger: ATACAGCTTCTGCCTGACCCACTTGGGATGAAGCCC...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCTTCTATGTGATTACTTaGCATCTTCATAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPFYVIT*HLHSMV
Trigger: CACCATGCTATGAAGATGCCAAGTAATCACATAGAA...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAGAACGAGACTCTGCATaGTCCATTGTTCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSERDSA*SIVHWK
Trigger: TTTCCAGTGAACAATGGACCATGCAGAGTCTCGTTC...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATCCATTTCCTGGACCTaGACTTTTAGACCTGCTACA +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGSISWT*TFRPAT
Trigger: TGTAGCAGGTCTAAAAGTTCAGGTCCAGGAAATGGA...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAACTGCAAACCATTTCTaGAAATGGTGTCCTCATGGA +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSTANHF*KWCPHG
Trigger: TCCATGAGGACACCATTTTCAGAAATGGTTTGCAGT...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCACGAGCAAGTTCTGCATaGAAACTAAAGGACTTACCA +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSRASSA*KLKDLP
Trigger: TGGTAAGTCCTTTAGTTTTCATGCAGAACTTGCTCG...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATAGGGGAAAAGGCCCTTaGTGGTTTGGGATGCAGTGC +
Preference number: 4 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHRGKGP*WFGMQC
Trigger: GCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCT...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAACTCCTGACCTCAGGTaGTCTGCTCACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTTPDLR*SAHLGL
Trigger: GAGGCCCAGGTGAGCAGATCACCTGAGGTCAGGAGT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTACTGATTTTTCACTaGGCACAGGTTTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICLLIFH*AQVWPH
Trigger: ATGTGGCCAAACCTGTGCTCAGTGAAAAATCAGTAA...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAGGACACATCCCTAAATaGCAAAGATACATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSGHIPK*QRYIGH
Trigger: ATGGCCAATGTATCTTTGGCATTTAGGGATGTGTCC...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAGCGATCTCAGCTCACTaGAACCTCTGCCACTTAGGT +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPAISAH*NLCHLG
Trigger: ACCTAAGTGGCAGAGGTTGCAGTGAGCTGAGATCGC...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAGGCCCACAAATTGTTTaGTTCTGGTCTCTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGGPQIV*FWSLQK
Trigger: CTTTTGCAGAGACCAGAAGCAAACAATTTGTGGGCC...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAGCAGGAGAAACAAAGTaGTGGCCCTCAATATTTGTT +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSAGETK*WPSIFV
Trigger: AACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGC...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGACTTCACAAGGCTGTGTaGCCACAAACCAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGLHKAV*PQTNSQ
Trigger: TTGAGAATTGGTTTGTGGGCACACAGCCTTGTGAAG...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAGGGTCCAGGCAACACTaGCCAAGGGGCTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAGSRQH*PRGFWE
Trigger: TTCCCAGAAGCCCCTTGGGCAGTGTTGCCTGGACCC...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000596894.5
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGACCTGGGATAGGTCACTaGACAATTCAGGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGPGIGH*TIQEKQ
Trigger: TTGCTTTTCCTGAATTGTCCAGTGACCTATCCCAGG...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGACTTGAGTTTCCTCCATaGAGAAGCACAGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGLEFPP*RSTESR
Trigger: TCTGGATTCTGTGCTTCTCCATGGAGGAAACTCAAG...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTGTGAGCCACTTCACCTaGCCCATTATTATTGCATTT +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICVSHFT*PIIIAF
Trigger: AAATGCAATAATAATGGGCCAGGTGAAGTGGCTCAC...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCATTCAAAGCTGCCCTaGGGCACAGACAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRHSKLP*GTDRLD
Trigger: GTCCAACCTGTCTGTGCCCCAGGGCAGCTTTGAATG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAATCTTTTGGCTTCCCTaGGTTACACTGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSIFWLP*VTLEEE
Trigger: TTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTATCTTTTGGCTTCCCTaGGTTACACTGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICIFWLP*VTLEEE
Trigger: TTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTGGTGTGGCCATCTTTaGAATGTATGTTCTGCTACA +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICWCGHL*NVCSAT
Trigger: TGTAGCAGAACATACATTCCAAAGATGGCCACACCA...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCCTTATTTGCATAAAATaGACCTGGAGTTGCAAATCA +
Preference number: 4 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPLICIK*TWSCKS
Trigger: TGATTTGCAACTCCAGGTCCATTTTATGCAAATAAG...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTGTTGTGTTAAGGCACTaGTACTTTGGAGGAACAATC +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICVVLRH*YFGGTI
Trigger: GATTGTTCCTCCAAAGTACCAGTGCCTTAACACAAC...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGAATGTAAAGGGCCCTTaGGGTCCAGGCAACACTGCC +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRNVKGP*GPGNTA
Trigger: GGCAGTGTTGCCTGGACCCCAAGGGCCCTTTACATT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTGTATTCCAAATCTGTaGACCAATTCCTTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICCIPNL*TNSLSL
Trigger: AAGGGACAAGGAATTGGTTCACAGATTTGGAATACA...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAACTGCAAACCATTTCTaGAAATGGTGTCCTCATGGA +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGTANHF*KWCPHG
Trigger: TCCATGAGGACACCATTTTCAGAAATGGTTTGCAGT...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGACGAGCAAGTTCTGCATaGAAACTAAAGGACTTACCA +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGRASSA*KLKDLP
Trigger: TGGTAAGTCCTTTAGTTTTCATGCAGAACTTGCTCG...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATGTGCTCTCACTGGTGTaGATTCGCTGGTGTGAAATA +
Preference number: 4 (lower is better)
Translates to: IFWLPWVTLEEELSWATHVLSLV*IRWCEI
Trigger: TATTTCACACCAGCGAATTCACACCAGTGAGAGCAC...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCACATTACAGCTATCCCTaGGTCTTCAAAACTTTACTC +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSHYSYP*VFKTLL
Trigger: GAGTAAAGTTTTGAAGACTCAGGGATAGCTGTAATG...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACCAAAAGGAAGGACCATaGGCTCTACCTCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINQKEGP*ALPLGE
Trigger: CTCCCCAAGAGGTAGAGCTCATGGTCCTTCCTTTTG...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTCACAGACATTTTGGTTaGCAATGGACATTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICHRHFG*QWTLVQ
Trigger: TTGGACTAATGTCCATTGTCAACCAAAATGTCTGTG...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCAGAGGAGGGTCCACCTaGATGGTCCATTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVRGGST*MVHCSL
Trigger: CAGTGAACAATGGACCATGCAGGTGGACCCTCCTCT...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCATGGTTTGGGATGCAGTaGATCAGTATCAATCTTCTA +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSWFGMQ*ISINLL
Trigger: TAGAAGATTGATACTGATGCACTGCATCCCAAACCA...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGACTTGATGGTTTGGGATaGAGTGCATCAGTATCAATC +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGLDGLG*SASVSI
Trigger: GATTGATACTGATGCACTGCATCCCAAACCATCAAG...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATTTCATGCAATTTTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: IFWLPWVTLEEELSWATHFMQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAAAATTGCATGAA...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGGCGATCTCAGCTCACTaGAACCTCTGCCACTTAGGT +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRAISAH*NLCHLG
Trigger: ACCTAAGTGGCAGAGGTTGCAGTGAGCTGAGATCGC...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATTGGTCCATTGTTCACTaGAAAGGAAGGCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: IFWLPWVTLEEELSWATHWSIVH*KGRPGI
Trigger: TATCCCAGGCCTTCCTTTCCAGTGAACAATGGACCA...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAGAGGGTCCACCTGCATaGTCCATTGTTCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPEGPPA*SIVHWK
Trigger: TTTCCAGTGAACAATGGACCATGCAGGTGGACCCTC...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATCAAGCTAGAGTGCAGTaGTGCGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHQARVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCGCACCACTGCACTCTAGCTTG...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAAAGATAGGCCAAGGCTaGTCTTTCCCATGTTCATTA +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGKIGQG*SFPCSL
Trigger: TAATGAACATGGGAAAGACCAGCCTTGGCCTATCTT...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACGGGCTTCATCCCAAGTaGGTCAGGCAGAAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINGLHPK*VRQKLY
Trigger: ATACAGCTTCTGCCTGACCCACTTGGGATGAAGCCC...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAATTTGGGCAGGCTCATaGGGGAAAGCTTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPIWAGS*GKAFLC
Trigger: GCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAAT...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTACCTATCGCTGTGTaGCAAACTACTCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICLPIAV*QTTPKL
Trigger: AAGTTTTGGAGTAGTTTGCCACACAGCGATAGGTAA...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGTATTCCAAATCTGTaGACCAATTCCTTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGCIPNL*TNSLSL
Trigger: AAGGGACAAGGAATTGGTTCACAGATTTGGAATACA...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCACTAACGCATCCCATCTaGTGTCTCTCTTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPLTHPI*CLSCLS
Trigger: TGAGAGACAAGAGAGACATCAGATGGGATGCGTTAG...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTATGTCGAGTAAGTTCTaGATTAACACTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICMSSKF*INTEGF
Trigger: AAAGCCTTCAGTGTTAATTCAGAACTTACTCGACAT...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCGTGTGGTCCATGTGTTaGCACTGGCCCACAAATTGT +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVVWSMC*HWPTNC
Trigger: ACAATTTGTGGGCCAGTGTCAACACATGGACCACAC...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGACATTACAGCTATCCCTaGGTCTTCAAAACTTTACTC +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGHYSYP*VFKTLL
Trigger: GAGTAAAGTTTTGAAGACTCAGGGATAGCTGTAATG...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCACTGGTGATTACCATATaGAGCAAGTATTTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSLVITI*SKYFSY
Trigger: GTAACTGAAATACTTGCTTCATATGGTAATCACCAG...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAATGTCGAGCAAGTTCTaGATGAAAACTAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: QFVGEKALDGLGCSASVSMSSKF*MKTKGL
Trigger: AAGTCCTTTAGTTTTCATGCAGAACTTGCTCGACAT...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTATGTCGAGCAAGTTCTaGATGAAAACTAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICMSSKF*MKTKGL
Trigger: AAGTCCTTTAGTTTTCATGCAGAACTTGCTCGACAT...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCTGGAAAGGAAGGCCTaGGATAGGTCACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRLERKA*DRSLDN
Trigger: ATTGTCCAGTGACCTATCCCAGGCCTTCCTTTCCAG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCGAGGGTCCACCTGCATaGTCCATTGTTCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVEGPPA*SIVHWK
Trigger: TTTCCAGTGAACAATGGACCATGCAGGTGGACCCTC...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAAATGAGAAAGTCATTTaGAGGCCCGTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPNEKVI*RPVKRR
Trigger: CCTCCTCTTCACGGGCCTCCAAATGACTTTCTCATT...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAAATGTAAAGGGCCCTTaGGGTCCAGGCAACACTGCC +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFANVKGP*GPGNTA
Trigger: GGCAGTGTTGCCTGGACCCCAAGGGCCCTTTACATT...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596894.5
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGGAAACCGGGGCTGCATaGTCCATTGTTCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRETGAA*SIVHWK
Trigger: TTTCCAGTGAACAATGGACCATGCAGCCCCGGTTTC...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600094.5
ENST00000627583.2
3UTR CAA 72 bp TTCACAAGGCTGTGTGCCCACAAACCAATTCTCAAGTaGCCATTAAGTACTACTGTTCCCAGAGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: FTRLCAHKPILK*PLSTTVPRDVL
Trigger: AAGAACATCTCTGGGAACAGTAGTACTTAATGGCAACTTGAGAATTGGTTTGTGGGCACACAGCCTTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATCTTCTCGCCCGCAAGTaGATAATAACGGTTAAGGTG +
Preference number: 4 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHLLARK*IITVKV
Trigger: CACCTTAACCGTTATTATTCACTTGCGGGCGAGAAG...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATCTTGTCAGTTCTCCTTaGGTTTCCTCCATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHLVSSP*VSSMEK
Trigger: CTTCTCCATGGAGGAAACTCAAGGAGAACTGACAAG...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCTAACGCATCCCATCTaGTGTCTCTCTTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRLTHPI*CLSCLS
Trigger: TGAGAGACAAGAGAGACATCAGATGGGATGCGTTAG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATCTAACGCATCCCATCTaGTGTCTCTCTTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHLTHPI*CLSCLS
Trigger: TGAGAGACAAGAGAGACATCAGATGGGATGCGTTAG...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAGGAATCTCACCGGTGTaGGTTCTCAGATGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPGISPV*VLRCKV
Trigger: TACTTTACATCTGAGAACTCACACCGGTGAGATTCC...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAATGTCGAGTAAGTTCTaGATTAACACTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGMSSKF*INTEGF
Trigger: AAAGCCTTCAGTGTTAATTCAGAACTTACTCGACAT...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCACTAACAGGGACTGAGTaGTGCTATAGTCTTTCGACT +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPLTGTE*CYSLST
Trigger: AGTCGAAAGACTATAGCATCACTCAGTCCCTGTTAG...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAATGTCGAGCAAGTTCTaGATGAAAACTAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGMSSKF*MKTKGL
Trigger: AAGTCCTTTAGTTTTCATGCAGAACTTGCTCGACAT...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAGCGATCTCAGCTCACTaGAACCTCTGCCACTTAGGT +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAAISAH*NLCHLG
Trigger: ACCTAAGTGGCAGAGGTTGCAGTGAGCTGAGATCGC...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATGCAGGAGAAACAAAGTaGTGGCCCTCAATATTTGTT +
Preference number: 4 (lower is better)
Translates to: IFWLPWVTLEEELSWATHAGETK*WPSIFV
Trigger: AACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGC...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCGGCTTTTCACAAAACTaGTTGATGACTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVGFSQN*LMTATW
Trigger: CCAGGTGGCAGTCATCAAGCAGTTTTGTGAAAAGCC...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAATATTTTGGTGCAGATaGTTTTGTATTCTTACCGGG +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGIFWCR*FCILTG
Trigger: CCCGGTAAGAATACAAAAGCATCTGCACCAAAATAT...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCAATGAGAAAGTCATTTaGAGGCCCGTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVNEKVI*RPVKRR
Trigger: CCTCCTCTTCACGGGCCTCCAAATGACTTTCTCATT...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGAGGCCCTTGATGGTTTaGGATGCAGTGCATCAGTAT +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRRPLMV*DAVHQY
Trigger: ATACTGATGCACTGCATCCCAAACCATCAAGGGCCT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCACAAGCTAGAGTGCAGTaGTGCGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAQARVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCGCACCACTGCACTCTAGCTTG...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACATCTTCATAGCATGGTaGCTGGGCTTCATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINIFIAW*LGFIPS
Trigger: ACTTGGGATGAAGCCCAGCCACCATGCTATGAAGAT...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTAGATCACAGACATTTTaGTTGACAATGGACATTAGT +
Preference number: 4 (lower is better)
Translates to: TGSRVVSRRNKVLALNICRSQTF*LTMDIS
Trigger: ACTAATGTCCATTGTCAACCAAAATGTCTGTGATCT...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATGTTGTGTTAAGGCACTaGTACTTTGGAGGAACAATC +
Preference number: 4 (lower is better)
Translates to: IFWLPWVTLEEELSWATHVVLRH*YFGGTI
Trigger: GATTGTTCCTCCAAAGTACCAGTGCCTTAACACAAC...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGTCCATTTCCTGGACCTaGACTTTTAGACCTGCTACA +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRSISWT*TFRPAT
Trigger: TGTAGCAGGTCTAAAAGTTCAGGTCCAGGAAATGGA...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAGGGCATTATAGAAAGTaGGTGCAGAGGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPGHYRK*VQRNDL
Trigger: CAAATCATTCCTCTGCACTCACTTTCTATAATGCCC...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCAATGGTATATCCCAGTaGGACCAGGTTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVNGISQ*DQVAVV
Trigger: AACTACAGCAACCTGGTCTCACTGGGATATACCATT...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATAATGGTATATCCCAGTaGGACCAGGTTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHNGISQ*DQVAVV
Trigger: AACTACAGCAACCTGGTCTCACTGGGATATACCATT...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACGGAATCTCACCGGTGTaGGTTCTCAGATGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINGISPV*VLRCKV
Trigger: TACTTTACATCTGAGAACTCACACCGGTGAGATTCC...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGGGAATCTCACCGGTGTaGGTTCTCAGATGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRGISPV*VLRCKV
Trigger: TACTTTACATCTGAGAACTCACACCGGTGAGATTCC...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATGGAATCTCACCGGTGTaGGTTCTCAGATGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHGISPV*VLRCKV
Trigger: TACTTTACATCTGAGAACTCACACCGGTGAGATTCC...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAGTGTGGTCCATGTGTTaGCACTGGCCCACAAATTGT +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAVWSMC*HWPTNC
Trigger: ACAATTTGTGGGCCAGTGTCAACACATGGACCACAC...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCACTTGATGGTTTGGGATaGAGTGCATCAGTATCAATC +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPLDGLG*SASVSI
Trigger: GATTGATACTGATGCACTGCATCCCAAACCATCAAG...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATTTGCTTCTGGTCTCTaGAAAAGTTATAGATACCAA +
Preference number: 4 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGFASGL*KSYRYQ
Trigger: TTGGTATCTATAACTTTTGCAGAGACCAGAAGCAAA...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATGGCCCACAAATTGTTTaGTTCTGGTCTCTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHGPQIV*FWSLQK
Trigger: CTTTTGCAGAGACCAGAAGCAAACAATTTGTGGGCC...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACACACAGGGGCATGTTTTaGCAAACACCACATAGGCAG +
Preference number: 4 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTHRGMF*QTPHRQ
Trigger: CTGCCTATGTGGTGTTTGGCAAAACATGCCCCTGTG...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCACTGGAAAGGAAGGCCTaGGATAGGTCACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFALERKA*DRSLDN
Trigger: ATTGTCCAGTGACCTATCCCAGGCCTTCCTTTCCAG...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAAAGATAGGCCAAGGCTaGTCTTTCCCATGTTCATTA +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPKIGQG*SFPCSL
Trigger: TAATGAACATGGGAAAGACCAGCCTTGGCCTATCTT...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAGGAGAAACAAAGTGCTaGCCCTCAATATTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPGETKC*PSIFVS
Trigger: GGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCC...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAAAGGCACTGGTACTTTaGAGGAACAATCCACTGATA +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPKALVL*RNNPLI
Trigger: TATCAGTGGATTGTTCCTCCAAAGTACCAGTGCCTT...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACACTTCTCGCCCGCAAGTaGATAATAACGGTTAAGGTG +
Preference number: 4 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTLLARK*IITVKV
Trigger: CACCTTAACCGTTATTATTCACTTGCGGGCGAGAAG...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCACTTCTCGCCCGCAAGTaGATAATAACGGTTAAGGTG +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFALLARK*IITVKV
Trigger: CACCTTAACCGTTATTATTCACTTGCGGGCGAGAAG...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGGGGCATTATAGAAAGTaGGTGCAGAGGAATGATTTG +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRGHYRK*VQRNDL
Trigger: CAAATCATTCCTCTGCACTCACTTTCTATAATGCCC...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACACTTGTCAGTTCTCCTTaGGTTTCCTCCATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTLVSSP*VSSMEK
Trigger: CTTCTCCATGGAGGAAACTCAAGGAGAACTGACAAG...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAGGCAGAAAAAGCGACTaGCATACCTGCTTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAGRKSD*HTCFLG
Trigger: ACCCAAAAAGCAGGTATGTCAGTCGCTTTTTCTGCC...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACGCTACACCAAGTGAATaGACTAAGGATACCATAGTG +
Preference number: 4 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINATPSE*TKDTIV
Trigger: CACTATGGTATCCTTAGTTCATTCACTTGGTGTAGC...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCGCTACACCAAGTGAATaGACTAAGGATACCATAGTG +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVATPSE*TKDTIV
Trigger: CACTATGGTATCCTTAGTTCATTCACTTGGTGTAGC...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCACTGTATTGCCTTTTATaGCTTAGTCGTGGAAATCAC +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPLYCLL*LSRGNH
Trigger: GTGATTTCCACGACTAAGTCATAAAAGGCAATACAG...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCACACAGACATTTTGGTTaGCAATGGACATTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPHRHFG*QWTLVQ
Trigger: TTGGACTAATGTCCATTGTCAACCAAAATGTCTGTG...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACTTGCAGAGGAATATGTaGGCAGCAGAGCAATATACA +
Preference number: 4 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINLQRNM*AAEQYT
Trigger: TGTATATTGCTCTGCTGCTCACATATTCCTCTGCAA...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACGGACACATCCCTAAATaGCAAAGATACATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINGHIPK*QRYIGH
Trigger: ATGGCCAATGTATCTTTGGCATTTAGGGATGTGTCC...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCATGGTTTGGGATGCAGTaGATCAGTATCAATCTTCTA +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPWFGMQ*ISINLL
Trigger: TAGAAGATTGATACTGATGCACTGCATCCCAAACCA...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCTTGATGGTTTGGGATaGAGTGCATCAGTATCAATC +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRLDGLG*SASVSI
Trigger: GATTGATACTGATGCACTGCATCCCAAACCATCAAG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACATGCCACTTAGGTTCATaGAATTTTCCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTCHLGS*NFPASA
Trigger: GGCTGAGGCAGGAAAATTGCATGAACCTAAGTGGCA...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCATCACAGTGTTATTCCTaGCATAAACACAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFASQCYS*HKHRPT
Trigger: GGTGGGCCTGTGTTTATGGCAGGAATAACACTGTGA...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATATATTTTGGTGCAGATaGTTTTGTATTCTTACCGGG +
Preference number: 4 (lower is better)
Translates to: IFWLPWVTLEEELSWATHIFWCR*FCILTG
Trigger: CCCGGTAAGAATACAAAAGCATCTGCACCAAAATAT...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCATGGTCCATTGTTCACTaGAAAGGAAGGCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAWSIVH*KGRPGI
Trigger: TATCCCAGGCCTTCCTTTCCAGTGAACAATGGACCA...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGGTGAGCCACTTCACCTaGCCCATTATTATTGCATTT +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRVSHFT*PIIIAF
Trigger: AAATGCAATAATAATGGGCCAGGTGAAGTGGCTCAC...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATAAGATAGGCCAAGGCTaGTCTTTCCCATGTTCATTA +
Preference number: 4 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHKIGQG*SFPCSL
Trigger: TAATGAACATGGGAAAGACCAGCCTTGGCCTATCTT...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCATGGGATATATTGGTGTaGCCATCTTTGGAATGTATG +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPWDILV*PSLECM
Trigger: CATACATTCCAAAGATGGCCACACCAATATATCCCA...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCGATGAACATGCAGAATaGGATATATTGGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVDEHAE*DILVWP
Trigger: TGGCCACACCAATATATCCCATTCTGCATGTTCATC...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCGGAGAAACAAAGTGCTaGCCCTCAATATTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVGETKC*PSIFVS
Trigger: GGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCC...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCGATCTTGAAGATACTTaGACTGGATCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVDLEDT*TGSALP
Trigger: AGGAAGAGCTGATCCAGTCCAAGTATCTTCAAGATC...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
3UTR CAA 72 bp CAAAACTGCTTGATGACTGCCACCTGGTTGGAAGTATaGTCAGATGCCATAAATTGTAAGATACACCTTGAT +
Preference number: 4 (lower is better)
Translates to: QNCLMTATWLEV*SDAINCKIHLD
Trigger: ATCAAGGTGTATCTTACAATTTATGGCATCTGACAATACTTCCAACCAGGTGGCAGTCATCAAGCAGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACATCCATTTCCTGGACCTaGACTTTTAGACCTGCTACA +
Preference number: 4 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTSISWT*TFRPAT
Trigger: TGTAGCAGGTCTAAAAGTTCAGGTCCAGGAAATGGA...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCATCCATTTCCTGGACCTaGACTTTTAGACCTGCTACA +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFASISWT*TFRPAT
Trigger: TGTAGCAGGTCTAAAAGTTCAGGTCCAGGAAATGGA...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAAATGGTATATCCCAGTaGGACCAGGTTGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTNGISQ*DQVAVV
Trigger: AACTACAGCAACCTGGTCTCACTGGGATATACCATT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCATTACAGCTATCCCTaGGTCTTCAAAACTTTACTC +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRHYSYP*VFKTLL
Trigger: GAGTAAAGTTTTGAAGACTCAGGGATAGCTGTAATG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCCTGTATTGCCTTTTATaGCTTAGTCGTGGAAATCAC +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVLYCLL*LSRGNH
Trigger: GTGATTTCCACGACTAAGTCATAAAAGGCAATACAG...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAGGCCCACAAATTGTTTaGTTCTGGTCTCTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAGPQIV*FWSLQK
Trigger: CTTTTGCAGAGACCAGAAGCAAACAATTTGTGGGCC...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAAACAGAACGAGACTCTaGATGGTCCATTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFANRTRL*MVHCSL
Trigger: CAGTGAACAATGGACCATGCAGAGTCTCGTTCTGTT...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596894.5
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAAACAGAACGAGACTCTaGATGGTCCATTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTNRTRL*MVHCSL
Trigger: CAGTGAACAATGGACCATGCAGAGTCTCGTTCTGTT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCATGCCACTTAGGTTCATaGAATTTTCCTGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFACHLGS*NFPGRW
Trigger: CCATCTCCCAGGAAAATTGCATGAACCTAAGTGGCA...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596894.5
ENST00000629260.2
CDS-3UTR CCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCACCTGGGATAGGTCACTaGACAATTCAGGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAPGIGH*TIQEKQ
Trigger: TTGCTTTTCCTGAATTGTCCAGTGACCTATCCCAGG...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACACCTGGGATAGGTCACTaGACAATTCAGGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTPGIGH*TIQEKQ
Trigger: TTGCTTTTCCTGAATTGTCCAGTGACCTATCCCAGG...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCACTTGAGTTTCCTCCATaGAGAAGCACAGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFALEFPP*RSTESR
Trigger: TCTGGATTCTGTGCTTCTCCATGGAGGAAACTCAAG...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGTTACCTATCGCTGTGTaGCAAACTACTCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRLPIAV*QTTPKL
Trigger: AAGTTTTGGAGTAGTTTGCCACACAGCGATAGGTAA...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGATGGCATTTCCAGTGTaGGCTCACATCCAAAATATT +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRMAFPV*AHIQNI
Trigger: AATATTTTGGATGTGAGCCCACACTGGAAATGCCAT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAGAACGAGACTCTGCATaGTCCATTGTTCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAERDSA*SIVHWK
Trigger: TTTCCAGTGAACAATGGACCATGCAGAGTCTCGTTC...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596894.5
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGATGTCGAGTAAGTTCTaGATTAACACTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRMSSKF*INTEGF
Trigger: AAAGCCTTCAGTGTTAATTCAGAACTTACTCGACAT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR TCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACAAGAATGAACACAACTaGGAATATGAACACAGACTG +
Preference number: 4 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINKNEHN*EYEHRL
Trigger: CAGTCTGTGTTCATATTCTCAGTTGTGTTCATTCTT...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCTGGTGATTACCATATaGAGCAAGTATTTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRLVITI*SKYFSY
Trigger: GTAACTGAAATACTTGCTTCATATGGTAATCACCAG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCGCTTTACTAGGTTTTTaGATGAATGTGCTGATGGTT +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVALLGF*MNVLMV
Trigger: AACCATCAGCACATTCATTCAAAAACCTAGTAAAGC...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACATCATAATGGATCCATaGGATCACAGACATTTTGGT +
Preference number: 4 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINIIMDP*DHRHFG
Trigger: ACCAAAATGTCTGTGATCTCATGGATCCATTATGAT...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACATTGCAGAGGAATATGTaGGCAGCAGAGCAATATACA +
Preference number: 4 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTLQRNM*AAEQYT
Trigger: TGTATATTGCTCTGCTGCTCACATATTCCTCTGCAA...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCACTTGATGGTTTGGGATaGAGTGCATCAGTATCAATC +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFALDGLG*SASVSI
Trigger: GATTGATACTGATGCACTGCATCCCAAACCATCAAG...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAAAGATAGGCCAAGGCTaGTCTTTCCCATGTTCATTA +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAKIGQG*SFPCSL
Trigger: TAATGAACATGGGAAAGACCAGCCTTGGCCTATCTT...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAGATCTTGAAGATACTTaGACTGGATCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFADLEDT*TGSALP
Trigger: AGGAAGAGCTGATCCAGTCCAAGTATCTTCAAGATC...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAAGATCACAGACATTTTaGTTGACAATGGACATTAGT +
Preference number: 4 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPRSQTF*LTMDIS
Trigger: ACTAATGTCCATTGTCAACCAAAATGTCTGTGATCT...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCATTCATGCAATTTTCCTaGGAGATGGAGGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAFMQFS*EMEVAV
Trigger: TACTGCAACCTCCATCTCCCAGGAAAATTGCATGAA...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596894.5
ENST00000629260.2
CDS-3UTR TCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCATGTATTCCAAATCTGTaGACCAATTCCTTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFACIPNL*TNSLSL
Trigger: AAGGGACAAGGAATTGGTTCACAGATTTGGAATACA...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCATGGTTTGGGATGCAGTaGATCAGTATCAATCTTCTA +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAWFGMQ*ISINLL
Trigger: TAGAAGATTGATACTGATGCACTGCATCCCAAACCA...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGTTTGCTTCTGGTCTCTaGAAAAGTTATAGATACCAA +
Preference number: 4 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRFASGL*KSYRYQ
Trigger: TTGGTATCTATAACTTTTGCAGAGACCAGAAGCAAA...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAGAACAGATCTATCCCTaGACAGTCCAAGTAAACAAA +
Preference number: 4 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTEQIYP*TVQVNK
Trigger: TTTGTTTACTTGGACTGTCCAGGGATAGATCTGTTC...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CCA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCCTTATTTGCATAAAATaGACCTGGAGTTGCAAATCA +
Preference number: 4 (lower is better)
Translates to: LQIMELLLISLGVKLLGVLICIK*TWSCKS
Trigger: TGATTTGCAACTCCAGGTCCATTTTATGCAAATAAG...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR TCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAATCATAATGGATCCATaGGATCACAGACATTTTGGT +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAIIMDP*DHRHFG
Trigger: ACCAAAATGTCTGTGATCTCATGGATCCATTATGAT...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAATGTCGAGCAAGTTCTaGATGAAAACTAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAMSSKF*MKTKGL
Trigger: AAGTCCTTTAGTTTTCATGCAGAACTTGCTCGACAT...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACATATGGCTGTCTTATTTaGATAAAATGGACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTYGCLI*IKWTWS
Trigger: ACTCCAGGTCCATTTTATGCAAATAAGACAGCCATA...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCATATGGCTGTCTTATTTaGATAAAATGGACCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAYGCLI*IKWTWS
Trigger: ACTCCAGGTCCATTTTATGCAAATAAGACAGCCATA...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR GCA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACATTTGCTTCTGGTCTCTaGAAAAGTTATAGATACCAA +
Preference number: 4 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTFASGL*KSYRYQ
Trigger: TTGGTATCTATAACTTTTGCAGAGACCAGAAGCAAA...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR GCA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCATTTGCTTCTGGTCTCTaGAAAAGTTATAGATACCAA +
Preference number: 4 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAFASGL*KSYRYQ
Trigger: TTGGTATCTATAACTTTTGCAGAGACCAGAAGCAAA...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCAGTGTGGTCCATGTGTaGACACTGGCCCACAAATTG +
Preference number: 5 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPSVVHV*TLAHKL
Trigger: CAATTTGTGGGCCAGTGTCAACACATGGACCACACT...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS TCA 90 bp AGGAGAATAGAGTCTGGAGACAGGGAACCTAAGGCCAACCCCTGCTaGCTTCTTGGAATTGGACTAAGAGGAAAACCTCACCTCTCCGTG +
Preference number: 5 (lower is better)
Translates to: RRIESGDREPKANPC*LLGIGLRGKPHLSV
Trigger: CACGGAGAGGTGAGGTTTTCCTCTTAGTCCAATTCCAAGAAGTCAGCAGGGGTTGGCCTTAGGTTCCCTGTCTCCAGACTCTATTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597363.5
ENST00000627810.2
CDS-3UTR CAA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGACAATGTAAAGGGCCCTaGGGGTCCAGGCAACACTGC +
Preference number: 5 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGQCKGP*GSRQHC
Trigger: GCAGTGTTGCCTGGACCCCAAGGGCCCTTTACATTG...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAGGGCTGCATGGTCCATaGTTCACTGGAAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: QFVGEKALDGLGCSASVSGLHGP*FTGKEG
Trigger: GCCTTCCTTTCCAGTGAACAATGGACCATGCAGCCC...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600094.5
ENST00000627583.2
CDS TCA 90 bp ATCCAGTTCTGCAGGCTGTACGGGAAGCATAGTGGCATCTGCTTTTaGGCAGGCCTCAGGAAGTTTCCAATCATGGTGGAAGGCAAAATG +
Preference number: 5 (lower is better)
Translates to: IQFCRLYGKHSGICF*AGLRKFPIMVEGKM
Trigger: CATTTTGCCTTCCACCATGATTGGAAACTTCCTGAGGCCTGCTCAAAAGCAGATGCCACTATGCTTCCCGTACAGCCTGCAGAACTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597363.5
ENST00000627810.2
CDS-3UTR CAA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCGACCTGCTACAACAATaGTTCCCTCCTTTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPDLLQQ*FPPFQD
Trigger: ATCCTGAAAAGGAGGGAACAATTGTTGTAGCAGGTC...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCACACCTGCATGGTCCATaGTTCACTGGAAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: QFVGEKALDGLGCSASVSHLHGP*FTGKEG
Trigger: GCCTTCCTTTCCAGTGAACAATGGACCATGCAGGTG...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCACTTGTCAGTTCTCCTaGAGTTTCCTCCATGGAGAA +
Preference number: 5 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPTCQFS*SFLHGE
Trigger: TTCTCCATGGAGGAAACTCAAGGAGAACTGACAAGT...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCTTGACTAATATGTCGTaGTACCCTAAAGGTCTTGCC +
Preference number: 5 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPLTNMS*YPKGLA
Trigger: GGCAAGACCTTTAGGGTACAACGACATATTAGTCAA...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTGGGGGTCAAATCTTTaGGCTTCCCTGGGTTACACT +
Preference number: 5 (lower is better)
Translates to: TGSRVVSRRNKVLALNICWGSNL*ASLGYT
Trigger: AGTGTAACCCAGGGAAGCCAAAAGATTTGACCCCCA...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCCTGAGAACATGGATCTaGAAGATACTTGGACTGGAT +
Preference number: 5 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSLRTWI*KILGLD
Trigger: ATCCAGTCCAAGTATCTTCAAGATCCATGTTCTCAG...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAATGGCCTCTGTGATGTaGAGTAAGATGATAGTGCCG +
Preference number: 5 (lower is better)
Translates to: QFVGEKALDGLGCSASVSMASVM*SKMIVP
Trigger: CGGCACTATCATCTTACTCAACATCACAGAGGCCAT...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAAAGGCCCTTGATGGTTaGGGATGCAGTGCATCAGTA +
Preference number: 5 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGKALDG*GCSASV
Trigger: TACTGATGCACTGCATCCCAAACCATCAAGGGCCTT...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAAGTGTGGTCCATGTGTaGACACTGGCCCACAAATTG +
Preference number: 5 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGSVVHV*TLAHKL
Trigger: CAATTTGTGGGCCAGTGTCAACACATGGACCACACT...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAGACCTGCTACAACAATaGTTCCCTCCTTTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: QFVGEKALDGLGCSASVSDLLQQ*FPPFQD
Trigger: ATCCTGAAAAGGAGGGAACAATTGTTGTAGCAGGTC...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATCACCTGCATGGTCCATaGTTCACTGGAAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: IFWLPWVTLEEELSWATHHLHGP*FTGKEG
Trigger: GCCTTCCTTTCCAGTGAACAATGGACCATGCAGGTG...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAACTTGTCAGTTCTCCTaGAGTTTCCTCCATGGAGAA +
Preference number: 5 (lower is better)
Translates to: QFVGEKALDGLGCSASVSTCQFS*SFLHGE
Trigger: TTCTCCATGGAGGAAACTCAAGGAGAACTGACAAGT...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCCATCTGATGTCTCTCTaGTCTCTCAAATTCATGTTT +
Preference number: 5 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPHLMSL*SLKFMF
Trigger: AAACATGAATTTGAGAGACAAGAGAGACATCAGATG...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp GTGGCACAATCATGGCTCACTAAAGCCATGAGGCAGGGTCTCACTATGTTGCCCATGAAGTCTAAAATGTaGAGTAAGATGATACCGACG +
Preference number: 5 (lower is better)
Translates to: VAQSWLTKAMRQGLTMLPMKSKM*SKMIPT
Trigger: CGTCGGTATCATCTTACTCAACATTTTAGACTTCAT...GGGCAACATAGTGAGACCCTGCCTCATGGCTTTAGTGAGCCATGATTGTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CAATTTGGGCAGGCTCATGGGGGAAAGCTTTTCTCTGCTCCACTTAGCACCAGCCAGATTATGGAATTATaGCTAATCTCCTTAGGTGTG +
Preference number: 5 (lower is better)
Translates to: QFGQAHGGKLFSAPLSTSQIMEL*LISLGV
Trigger: CACACCTAAGGAGATTAGCAATAATTCCATAATCTG...GCTGGTGCTAAGTGGAGCAGAGAAAAGCTTTCCCCCATGAGCCTGCCCAAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCATCACTGAGCACAGGTTaGGCCACATTCACAAATTCT +
Preference number: 5 (lower is better)
Translates to: QFVGEKALDGLGCSASVSSLSTG*ATFTNS
Trigger: AGAATTTGTGAATGTGGCCAAACCTGTGCTCAGTGA...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAGACCTGCTACAACAATaGTTCCCTCCTTTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGDLLQQ*FPPFQD
Trigger: ATCCTGAAAAGGAGGGAACAATTGTTGTAGCAGGTC...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTGACTAATATGTCGTaGTACCCTAAAGGTCTTGCC +
Preference number: 5 (lower is better)
Translates to: TGSRVVSRRNKVLALNICLTNMS*YPKGLA
Trigger: GGCAAGACCTTTAGGGTACAACGACATATTAGTCAA...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCATTGACTAATATGTCGTaGTACCCTAAAGGTCTTGCC +
Preference number: 5 (lower is better)
Translates to: QFVGEKALDGLGCSASVSLTNMS*YPKGLA
Trigger: GGCAAGACCTTTAGGGTACAACGACATATTAGTCAA...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTCCTGGCCCATTATTATaGCATTTTAGAGAAGCACTG +
Preference number: 5 (lower is better)
Translates to: TGSRVVSRRNKVLALNICPGPLL*HFREAL
Trigger: CAGTGCTTCTCTAAAATGCAATAATAATGGGCCAGG...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTGCTTACAAATTTCTGTaGGACTGCATTCAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: TGSRVVSRRNKVLALNICAYKFL*DCIQSC
Trigger: GCAGCTTTGAATGCAGTCCAACAGAAATTTGTAAGC...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp ATCCCATCTGATGTCTCTCTTGTCTCTCAAATTCATGTTTACACTGCAAACCATGAGTTTGAGACCAGCTaGGCCAACATGGCGAAACCC +
Preference number: 5 (lower is better)
Translates to: IPSDVSLVSQIHVYTANHEFETS*ANMAKP
Trigger: GGGTTTCGCCATGTTGGCCAAGCTGGTCTCAAACTC...ATGGTTTGCAGTGTAAACATGAATTTGAGAGACAAGAGAGACATCAGATGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGGGGCTGCATGGTCCATaGTTCACTGGAAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRGLHGP*FTGKEG
Trigger: GCCTTCCTTTCCAGTGAACAATGGACCATGCAGCCC...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600094.5
ENST00000627583.2
CDS-3UTR CAA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAAATGCCAAAGATACATaGGCCATGGTTTTAGAACCA +
Preference number: 5 (lower is better)
Translates to: QFVGEKALDGLGCSASVSNAKDT*AMVLEP
Trigger: TGGTTCTAAAACCATGGCCAATGTATCTTTGGCATT...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAATGAATTCTGTAGTGTaGAGTGAGATGATAGCGACT +
Preference number: 5 (lower is better)
Translates to: QFVGEKALDGLGCSASVSMNSVV*SEMIAT
Trigger: AGTCGCTATCATCTCACTCAACACTACAGAATTCAT...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGACTGAGAACATGGATCTaGAAGATACTTGGACTGGAT +
Preference number: 5 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGLRTWI*KILGLD
Trigger: ATCCAGTCCAAGTATCTTCAAGATCCATGTTCTCAG...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTACCTGGTTGGAAGTATaGTCAGATGCCATAAATTGT +
Preference number: 5 (lower is better)
Translates to: TGSRVVSRRNKVLALNICTWLEV*SDAINC
Trigger: ACAATTTATGGCATCTGACAATACTTCCAACCAGGT...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCAACCTGGTTGGAAGTATaGTCAGATGCCATAAATTGT +
Preference number: 5 (lower is better)
Translates to: QFVGEKALDGLGCSASVSTWLEV*SDAINC
Trigger: ACAATTTATGGCATCTGACAATACTTCCAACCAGGT...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATTTGGTGCAGATGCTTTaGTATTCTTACCGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: IFWLPWVTLEEELSWATHLVQML*YSYREG
Trigger: GCCTTCCCGGTAAGAATACAAAAGCATCTGCACCAA...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCACAATGTAAAGGGCCCTaGGGGTCCAGGCAACACTGC +
Preference number: 5 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAQCKGP*GSRQHC
Trigger: GCAGTGTTGCCTGGACCCCAAGGGCCCTTTACATTG...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000596894.5
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAAATGCCAAAGATACATaGGCCATGGTTTTAGAACCA +
Preference number: 5 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGNAKDT*AMVLEP
Trigger: TGGTTCTAAAACCATGGCCAATGTATCTTTGGCATT...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCACATCTGATGTCTCTCTaGTCTCTCAAATTCATGTTT +
Preference number: 5 (lower is better)
Translates to: QFVGEKALDGLGCSASVSHLMSL*SLKFMF
Trigger: AAACATGAATTTGAGAGACAAGAGAGACATCAGATG...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAATGGCCTCTGTGATGTaGAGTAAGATGATAGTGCCG +
Preference number: 5 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPMASVM*SKMIVP
Trigger: CGGCACTATCATCTTACTCAACATCACAGAGGCCAT...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGAAGGCCCTTGATGGTTaGGGATGCAGTGCATCAGTA +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRKALDG*GCSASV
Trigger: TACTGATGCACTGCATCCCAAACCATCAAGGGCCTT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGAGTGTGGTCCATGTGTaGACACTGGCCCACAAATTG +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRSVVHV*TLAHKL
Trigger: CAATTTGTGGGCCAGTGTCAACACATGGACCACACT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGTGGGGGTCAAATCTTTaGGCTTCCCTGGGTTACACT +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRWGSNL*ASLGYT
Trigger: AGTGTAACCCAGGGAAGCCAAAAGATTTGACCCCCA...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp ACTGGGAGTAGAGTGGTGAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTGACTCACCTACATTTTaGCCTTTTAAGAACTATCCT +
Preference number: 5 (lower is better)
Translates to: TGSRVVSRRNKVLALNICDSPTF*PFKNYP
Trigger: AGGATAGTTCTTAAAAGGCAAAAATGTAGGTGAGTC...ACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTCACCACTCTACTCCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGATGCAGTGCATCAGTATCATGCTTTACTAGGTTTTaGAATGAATGTGCTGATGGT +
Preference number: 5 (lower is better)
Translates to: QFVGEKALDGLGCSASVSCFTRF*NECADG
Trigger: ACCATCAGCACATTCATTCAAAAACCTAGTAAAGCA...TGATACTGATGCACTGCATCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAGAGTTTGAGACCAGCTaGGCCAACATGGCGAAACCC +
Preference number: 5 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAEFETS*ANMAKP
Trigger: GGGTTTCGCCATGTTGGCCAAGCTGGTCTCAAACTC...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAGACCTGCTACAACAATaGTTCCCTCCTTTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPDLLQQ*FPPFQD
Trigger: ATCCTGAAAAGGAGGGAACAATTGTTGTAGCAGGTC...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCAACTTGTCAGTTCTCCTaGAGTTTCCTCCATGGAGAA +
Preference number: 5 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPTCQFS*SFLHGE
Trigger: TTCTCCATGGAGGAAACTCAAGGAGAACTGACAAGT...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGACATCTGATGTCTCTCTaGTCTCTCAAATTCATGTTT +
Preference number: 5 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGHLMSL*SLKFMF
Trigger: AAACATGAATTTGAGAGACAAGAGAGACATCAGATG...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGATGGCCTCTGTGATGTaGAGTAAGATGATAGTGCCG +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRMASVM*SKMIVP
Trigger: CGGCACTATCATCTTACTCAACATCACAGAGGCCAT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp AGAAGCACTGTTCAACAACAGTTTGTAGGGGAAAAGGCCCTTGATGGTTTGGGAATGAAGTCTAAAATGTaGAGTAAGATGATACCGACG +
Preference number: 5 (lower is better)
Translates to: RSTVQQQFVGEKALDGLGMKSKM*SKMIPT
Trigger: CGTCGGTATCATCTTACTCAACATTTTAGACTTCAT...TCCCAAACCATCAAGGGCCTTTTCCCCTACAAACTGTTGTTGAACAGTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp TACCATATGAAGCAAGTATTTCAGTTACCTATCGCTGTGTGGCAAACTACTCCATGGGGCACAGACAGGTaGGACAATTGTTATATAGCA +
Preference number: 5 (lower is better)
Translates to: YHMKQVFQLPIAVWQTTPWGTDR*DNCYIA
Trigger: TGCTATATAACAATTGTCCAACCTGTCTGTGCCCCA...TGGAGTAGTTTGCCACACAGCGATAGGTAACTGAAATACTTGCTTCATATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGACATTTAAAAATACTTaGGGAAGGCCGGGTGCGGTG +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRTFKNT*GRPGAV
Trigger: CACCGCACCCGGCCTTCCCAAAGTATTTTTAAATGT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACTTGGTGCAGATGCTTTaGTATTCTTACCGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINLVQML*YSYREG
Trigger: GCCTTCCCGGTAAGAATACAAAAGCATCTGCACCAA...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGACTTGTCAGTTCTCCTaGAGTTTCCTCCATGGAGAA +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRTCQFS*SFLHGE
Trigger: TTCTCCATGGAGGAAACTCAAGGAGAACTGACAAGT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAAAGGCCCTTGATGGTTaGGGATGCAGTGCATCAGTA +
Preference number: 5 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTKALDG*GCSASV
Trigger: TACTGATGCACTGCATCCCAAACCATCAAGGGCCTT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAAGTGTGGTCCATGTGTaGACACTGGCCCACAAATTG +
Preference number: 5 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFASVVHV*TLAHKL
Trigger: CAATTTGTGGGCCAGTGTCAACACATGGACCACACT...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAAGTGTGGTCCATGTGTaGACACTGGCCCACAAATTG +
Preference number: 5 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTSVVHV*TLAHKL
Trigger: CAATTTGTGGGCCAGTGTCAACACATGGACCACACT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGTTGGTGTGGCCATCTTaGGAATGTATGTTCTGCTAC +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRLVWPS*ECMFCY
Trigger: GTAGCAGAACATACATTCCAAAGATGGCCACACCAA...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCGCAGAATGGGATATATaGGTGTGGCCATCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: LQIMELLLISLGVKLLGVAEWDI*VWPSLE
Trigger: TTCCAAAGATGGCCACACCAATATATCCCATTCTGC...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAACTCTGCATGGTCCATaGTTCACTGGAAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFATLHGP*FTGKEG
Trigger: GCCTTCCTTTCCAGTGAACAATGGACCATGCAGAGT...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596894.5
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAACTCTGCATGGTCCATaGTTCACTGGAAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTTLHGP*FTGKEG
Trigger: GCCTTCCTTTCCAGTGAACAATGGACCATGCAGAGT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATCATCTGATGTCTCTCTaGTCTCTCAAATTCATGTTT +
Preference number: 5 (lower is better)
Translates to: IFWLPWVTLEEELSWATHHLMSL*SLKFMF
Trigger: AAACATGAATTTGAGAGACAAGAGAGACATCAGATG...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCTTGACTAATATGTCGTaGTACCCTAAAGGTCTTGCC +
Preference number: 5 (lower is better)
Translates to: LQIMELLLISLGVKLLGVLTNMS*YPKGLA
Trigger: GGCAAGACCTTTAGGGTACAACGACATATTAGTCAA...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGTTGACTAATATGTCGTaGTACCCTAAAGGTCTTGCC +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRLTNMS*YPKGLA
Trigger: GGCAAGACCTTTAGGGTACAACGACATATTAGTCAA...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAATGGCCTCTGTGATGTaGAGTAAGATGATAGTGCCG +
Preference number: 5 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAMASVM*SKMIVP
Trigger: CGGCACTATCATCTTACTCAACATCACAGAGGCCAT...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCCCTGGCCCATTATTATaGCATTTTAGAGAAGCACTG +
Preference number: 5 (lower is better)
Translates to: LQIMELLLISLGVKLLGVPGPLL*HFREAL
Trigger: CAGTGCTTCTCTAAAATGCAATAATAATGGGCCAGG...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGCCTGGCCCATTATTATaGCATTTTAGAGAAGCACTG +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRPGPLL*HFREAL
Trigger: CAGTGCTTCTCTAAAATGCAATAATAATGGGCCAGG...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACGCTTACAAATTTCTGTaGGACTGCATTCAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINAYKFL*DCIQSC
Trigger: GCAGCTTTGAATGCAGTCCAACAGAAATTTGTAAGC...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAACATTTAAAAATACTTaGGGAAGGCCGGGTGCGGTG +
Preference number: 5 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTTFKNT*GRPGAV
Trigger: CACCGCACCCGGCCTTCCCAAAGTATTTTTAAATGT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATGCTGGCCCTCAATATTaGTTTCCTGAATATATTAAC +
Preference number: 5 (lower is better)
Translates to: IFWLPWVTLEEELSWATHAGPQY*FPEYIN
Trigger: GTTAATATATTCAGGAAACAAATATTGAGGGCCAGC...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp ATCTTTTGGCTTCCCTGGGTTACACTGGAAGAAGAATTATCTTGGGCTACACATTGCTTTACTAGGTTTTaGAATGAATGTGCTGATGGT +
Preference number: 5 (lower is better)
Translates to: IFWLPWVTLEEELSWATHCFTRF*NECADG
Trigger: ACCATCAGCACATTCATTCAAAAACCTAGTAAAGCA...ATGTGTAGCCCAAGATAATTCTTCTTCCAGTGTAACCCAGGGAAGCCAAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAGACCTGCTACAACAATaGTTCCCTCCTTTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFADLLQQ*FPPFQD
Trigger: ATCCTGAAAAGGAGGGAACAATTGTTGTAGCAGGTC...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000596894.5
ENST00000626389.3
ENST00000629260.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGAATGCCAAAGATACATaGGCCATGGTTTTAGAACCA +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRNAKDT*AMVLEP
Trigger: TGGTTCTAAAACCATGGCCAATGTATCTTTGGCATT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCAATGCCAAAGATACATaGGCCATGGTTTTAGAACCA +
Preference number: 5 (lower is better)
Translates to: LQIMELLLISLGVKLLGVNAKDT*AMVLEP
Trigger: TGGTTCTAAAACCATGGCCAATGTATCTTTGGCATT...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGATGAATTCTGTAGTGTaGAGTGAGATGATAGCGACT +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRMNSVV*SEMIAT
Trigger: AGTCGCTATCATCTCACTCAACACTACAGAATTCAT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACATTGGTGTGGCCATCTTaGGAATGTATGTTCTGCTAC +
Preference number: 5 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTLVWPS*ECMFCY
Trigger: GTAGCAGAACATACATTCCAAAGATGGCCACACCAA...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACATCACTGAGCACAGGTTaGGCCACATTCACAAATTCT +
Preference number: 5 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTSLSTG*ATFTNS
Trigger: AGAATTTGTGAATGTGGCCAAACCTGTGCTCAGTGA...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGTCACAGACATTTTGGTaGACAATGGACATTAGTCCA +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRSQTFW*TMDISP
Trigger: TGGACTAATGTCCATTGTCAACCAAAATGTCTGTGA...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCTCACAGACATTTTGGTaGACAATGGACATTAGTCCA +
Preference number: 5 (lower is better)
Translates to: LQIMELLLISLGVKLLGVSQTFW*TMDISP
Trigger: TGGACTAATGTCCATTGTCAACCAAAATGTCTGTGA...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACCATCTGATGTCTCTCTaGTCTCTCAAATTCATGTTT +
Preference number: 5 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINHLMSL*SLKFMF
Trigger: AAACATGAATTTGAGAGACAAGAGAGACATCAGATG...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCATTGACTAATATGTCGTaGTACCCTAAAGGTCTTGCC +
Preference number: 5 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFALTNMS*YPKGLA
Trigger: GGCAAGACCTTTAGGGTACAACGACATATTAGTCAA...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp GAGCAGGAGAAACAAAGTGCTGGCCCTCAATATTTGTTTCCTGAATATATTAACATGAAGTCTAAAATGTaGAGTAAGATGATACCGACG +
Preference number: 5 (lower is better)
Translates to: EQEKQSAGPQYLFPEYINMKSKM*SKMIPT
Trigger: CGTCGGTATCATCTTACTCAACATTTTAGACTTCAT...GTTAATATATTCAGGAAACAAATATTGAGGGCCAGCACTTTGTTTCTCCTGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGATGAAGTCTAAAATGTaGAGTAAGATGATACCGACG +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRMKSKM*SKMIPT
Trigger: CGTCGGTATCATCTTACTCAACATTTTAGACTTCAT...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347077.9
ENST00000600094.5
ENST00000626389.3
ENST00000627583.2
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp TTACAGATTATGGAATTATTGCTAATCTCCTTAGGTGTGAAGTTACTGGGGGTCCAGATTATGGAATTATaGCTAATCTCCTTAGGTGTG +
Preference number: 5 (lower is better)
Translates to: LQIMELLLISLGVKLLGVQIMEL*LISLGV
Trigger: CACACCTAAGGAGATTAGCAATAATTCCATAATCTG...GACCCCCAGTAACTTCACACCTAAGGAGATTAGCAATAATTCCATAATCTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGGCTGGCCCTCAATATTaGTTTCCTGAATATATTAAC +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRAGPQY*FPEYIN
Trigger: GTTAATATATTCAGGAAACAAATATTGAGGGCCAGC...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGCCCATTATTATTGCATTTTAGAGAAGCACTGTTCAACAACAGTTTGTAGGGACTCACCTACATTTTaGCCTTTTAAGAACTATCCT +
Preference number: 5 (lower is better)
Translates to: LAHYYCILEKHCSTTVCRDSPTF*PFKNYP
Trigger: AGGATAGTTCTTAAAAGGCAAAAATGTAGGTGAGTC...CCTACAAACTGTTGTTGAACAGTGCTTCTCTAAAATGCAATAATAATGGGCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAAATGCCAAAGATACATaGGCCATGGTTTTAGAACCA +
Preference number: 5 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTNAKDT*AMVLEP
Trigger: TGGTTCTAAAACCATGGCCAATGTATCTTTGGCATT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAATGAATTCTGTAGTGTaGAGTGAGATGATAGCGACT +
Preference number: 5 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTMNSVV*SEMIAT
Trigger: AGTCGCTATCATCTCACTCAACACTACAGAATTCAT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS-3UTR CAA 90 bp ATATATCATAAAGATAGGCCAAGGCTGGTCTTTCCCATGTTCATTACATTAACAAAAATGGACCTGGAGTaGCAAATCATAATGGATCCA +
Preference number: 5 (lower is better)
Translates to: IYHKDRPRLVFPMFITLTKMDLE*QIIMDP
Trigger: TGGATCCATTATGATTTGCAACTCCAGGTCCATTTT...TGTTAATGTAATGAACATGGGAAAGACCAGCCTTGGCCTATCTTTATGATATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347077.9
ENST00000626389.3
CDS-3UTR CAA 90 bp CTGGTCTCTGCAAAAGTTATAGATACCAAGAGCAAGTATTTAGAAATGTTTGCAATGAAGTCTAAAATGTaGAGTAAGATGATACCGACG +
Preference number: 5 (lower is better)
Translates to: LVSAKVIDTKSKYLEMFAMKSKM*SKMIPT
Trigger: CGTCGGTATCATCTTACTCAACATTTTAGACTTCAT...TGCAAACATTTCTAAATACTTGCTCTTGGTATCTATAACTTTTGCAGAGACCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347077.9
ENST00000626389.3
ENST00000651981.1
ENST00000652291.1
CDS TCA 72 bp GAGTCTGGAGACAGGGAACCTAAGGCCAACCCCTGCTaGCTTCTTGGAATTGGACTAAGAGGAAAACCTCAC +
Preference number: 6 (lower is better)
Translates to: ESGDREPKANPC*LLGIGLRGKPH
Trigger: GTGAGGTTTTCCTCTTAGTCCAATTCCAAGAAGTCAGCAGGGGTTGGCCTTAGGTTCCCTGTCTCCAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597363.5
ENST00000627810.2
CDS GCA 72 bp AGGCAGGAGAATTTCTTGAACCTGGGAGATGGAGGTTaGAGTAAGCCAAGATCACATCACTGCACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RQENFLNLGDGG*SKPRSHHCTPA
Trigger: GGCTGGAGTGCAGTGATGTGATCTTGGCTTACTGCAACCTCCATCTCCCAGGTTCAAGAAATTCTCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593687.5
ENST00000625917.2
ENST00000651981.1
ENST00000652291.1
CDS CCA 72 bp GCCTCAGGAAGTTTCCAATCATGGTGGAAGGCAAAATaGGAGCAGGCACATCACATGGTGAAAGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: ASGSFQSWWKAK*EQAHHMVKAGA
Trigger: TGCTCCTGCTTTCACCATGTGATGTGCCTGCTCCCATTTTGCCTTCCACCATGATTGGAAACTTCCTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597363.5
ENST00000627810.2
CDS CCA 72 bp GCTTTTGAGCAGGCCTCAGGAAGTTTCCAATCATGGTaGAAGGCAAAATGGGAGCAGGCACATCACATGGTG +
Preference number: 6 (lower is better)
Translates to: AFEQASGSFQSW*KAKWEQAHHMV
Trigger: CACCATGTGATGTGCCTGCTCCCATTTTGCCTTCCACCATGATTGGAAACTTCCTGAGGCCTGCTCAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597363.5
ENST00000627810.2
CDS CCA 72 bp TCTGCTTTTGAGCAGGCCTCAGGAAGTTTCCAATCATaGTGGAAGGCAAAATGGGAGCAGGCACATCACATG +
Preference number: 6 (lower is better)
Translates to: SAFEQASGSFQS*WKAKWEQAHHM
Trigger: CATGTGATGTGCCTGCTCCCATTTTGCCTTCCACCATGATTGGAAACTTCCTGAGGCCTGCTCAAAAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597363.5
ENST00000627810.2
CDS TCA 72 bp GAGGTCTTTGGAGAAGATTGGAGAAGATGGATGATGTaGTTCTACCTAAACATTAATCTCAATAAAACAAAG +
Preference number: 6 (lower is better)
Translates to: EVFGEDWRRWMM*FYLNINLNKTK
Trigger: CTTTGTTTTATTGAGATTAATGTTTAGGTAGAATCACATCATCCATCTTCTCCAATCTTCTCCAAAGACCTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602253.5
ENST00000626141.2